Citrus Sinensis ID: 002539

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-
Protein Sequence
MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGRVGKIS
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccEEEEEcHHHHHHccccccEEEccccccHHHHHHHcccccEEEEEEEEEcccccccHHHHHccccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccEEEEEEccccccccccccccEEEEEccccccEEEEEccccEEEccccccccccEEEEEcccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHcHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccccEEEEEccEEEEEEEccccccEEcccccccHHHHHHHccccEEEEEEEEEcccccccHHHHHHHHHccccccEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccEEEccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEcccEccHHEEcccEEEEEccccccccEEEEEEEcccEEcccEEEEEEccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccccEEEccEEEccEEEccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
madsrrfaLGNQLDIEQILIEAQHRWLRPAEICEILRNYtkfriapesphtppsgslflfdRKVLRYFRkdghnwrkkkdgktVKEAHERLKAGSVDVLHCYYahgeenenfQRRSYWMLEEELSHIVLVHYRevkgnrtnfnrakvaegatpysqeneetipnsevegsqssgfhpnsyqmpsqtadtslnsaqaseyedaesvynnqassrfhsfldlQQPVAEKidagladpyypssltnnyqgkfsvvpgadfispaqtdksrnsndtgltyepqknldfpswEDVLQNcsqgvgsqpealgdipnqgydilgepftnsfgerkefgshlqtrgewqasrndsshlsnwpmdqkvyldsahdltsqsceqgaahdglldslrpphahpnmendvheqlpnaehghllksdpessltidgksfYSSAIKQHLIDGSTEGLKKLDSFNRWMSKElgdvkesnmqsssgaywetvesengvddsgvspqarldtymmspslsqdqlysiidfspnwayvSSEVKVLITGRFLMSQqeaenckwscmfgeievpaeIVAGGVlrchtssqkvgrvpfyvtcsnrlscsevrefeyrashipdvdvadncgditsenLRMQFGKLLCltsvstpnydpsnlsdisQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKaaeggkgpcvldhcgqGVLHFAAALgydwalepttvagvninfrdvngwTALHWAAYCGRERTVASLIALgaapgalsdptpkypsgrtpadlassighkgiAGYLAESDLSSALSAISlnkkdgdvaevtgatavqtvpqrcptpvsdgdlpyglsmKDSLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEykissvvgrvgkis
Flexible Loop (DISEMBL)
madsrrfalgnqLDIEQILIEaqhrwlrpAEICEILRNYTKFRiapesphtppsgslflfDRKVLRYfrkdghnwrkkkdgktvkeaherlkagsvdvLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYrevkgnrtnfnrakvaegatpysqeneeTIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFIspaqtdksrnsndTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKElgdvkesnmqSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTssqkvgrvpfyvTCSNRLSCSEVREFEYrashipdvdvaDNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAeekfsseeVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGatavqtvpqrcptpvsDGDLPYGLSMKDSLAAVRNATQAAARIhqvfrsrprsqVITMSLCMllqheykissvvgrvgkis
Low Complexity Region (SEG)
MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAeekfsseevkeklvqkllkeklqvwlvqkAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYlaesdlssalsaislNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLaavrnatqaaaRIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGRVGKIS
Disordered region (IsUnstruct)
******FALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIA**********SLFLFDRKVLRYFRKDGHNWRK***********ERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNF*************************************************************************SFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADF****************************SWEDVLQNC****************QGYDILGE************************************************************************************************************Y**AIKQHLI********************************************************************DQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVST***************************DWDLMLKLT***********EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA***************************GIAGYLA**********************VTGATAV*****************YGL****SLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGR*****
Disordered Region (DISOPRED)
**********NQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAP****TPPSGSLFLFDRKVLRYFRKDGHNWRKKK*****KEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGN************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************IDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVS**************LNSKISSLLKDENDDWDLM************EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD********************TGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQ**********************YKISSVVGRVG***
Disordered Region (DISEMBL)
MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHN*************HERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGA***********************FHPNSY***********************SVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKE*******************HLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDV*************************GVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGRVGKIS
Disordered Region (DISPRO)
*****RFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGN****NRAKVAE*********EETIPNSE*EGSQSSGFH***********************EDAESVYNNQASSRFHSFLD*QQP*************************************************************************************************************************************************************************************************************************EGLKKLDSFNRWMSKELGDVKE***********************************MSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQ**SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISL******************************DLPYGLSMKDSLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGRVGK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSRPRSQVITMSLCMLLQHEYKISSVVGRVGKIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	911	2.2.26 [Sep-21-2011]
Q8GSA7	1032	Calmodulin-binding transc	yes	no	0.867	0.765	0.494	0.0
Q6NPP4	1050	Calmodulin-binding transc	no	no	0.893	0.775	0.448	0.0
Q9FY74	1007	Calmodulin-binding transc	no	no	0.470	0.426	0.486	1e-118
Q9FYG2	1016	Calmodulin-binding transc	no	no	0.386	0.346	0.366	9e-63
Q9LSP8	838	Calmodulin-binding transc	no	no	0.490	0.533	0.323	8e-53
O23463	923	Calmodulin-binding transc	no	no	0.452	0.446	0.320	1e-48
Q9Y6Y1	1673	Calmodulin-binding transc	yes	no	0.125	0.068	0.420	1e-16
A2A891	1682	Calmodulin-binding transc	yes	no	0.125	0.067	0.420	2e-16
O94983	1202	Calmodulin-binding transc	no	no	0.124	0.094	0.385	1e-14
Q80Y50	1208	Calmodulin-binding transc	no	no	0.124	0.093	0.370	8e-13

>sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/900 (49%), Positives = 575/900 (63%), Gaps = 110/900 (12%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++RRF+  ++LD+ QIL EA+HRWLRP EICEIL+NY +F+I+ E P TP SGS+F+F
Sbjct: 1   MAEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHG++NENFQRRSYW+L
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121 EEELSHIVLVHYREVKGNR--TNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPN 178
           +EELSHIV VHY EVKG+R  T+FNR +  E A    QE  + +  SE +G  S  F+ N
Sbjct: 121 QEELSHIVFVHYLEVKGSRVSTSFNRMQRTEDAARSPQETGDAL-TSEHDGYASCSFNQN 179

Query: 179 SYQMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYY 237
            +   SQT D+ S+N   + E EDAES YN   SS  +S  +LQQP       G  DPYY
Sbjct: 180 DHSNHSQTTDSASVNGFHSPELEDAESAYNQHGSSTAYSHQELQQPATGGNLTGF-DPYY 238

Query: 238 PSSLT--NNYQGKFSVVPGADFISPAQTDKSRNSNDTGLT--YEPQKNLDFPSWEDVLQN 293
             SLT  ++YQ +   +P  D  S    DKS+  N  G+T   + +K++D  +WE++L N
Sbjct: 239 QISLTPRDSYQKELRTIPVTD--SSIMVDKSKTINSPGVTNGLKNRKSIDSQTWEEILGN 296

Query: 294 CSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSN- 352
           C  GV    EAL   PN  +++L +   +SF   ++F S  ++  + Q    +S   S+ 
Sbjct: 297 CGSGV----EALPLQPNSEHEVLDQILESSF-TMQDFASLQESMVKSQNQELNSGLTSDR 351

Query: 353 --WPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHL 410
             W   Q + L++  +L S                             +E+ P       
Sbjct: 352 TVWFQGQDMELNAISNLAS-----------------------------NEKAP------- 375

Query: 411 LKSDPESSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV------KE 462
                           Y S +KQHL+ G+   EGLKK+DSFNRWMSKELGDV       E
Sbjct: 376 ----------------YLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANE 419

Query: 463 SNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSS 522
           S  QSSS  YWE VESE+G   +G + +  +D Y+MSPSLS++QL+SI DFSP+WAYV  
Sbjct: 420 SFTQSSSRTYWEEVESEDG--SNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGC 477

Query: 523 EVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCS 582
           EV V +TG+FL +++E E  +WSCMFG+ EVPA++++ G+L+C     + GRVPFYVTCS
Sbjct: 478 EVVVFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCS 537

Query: 583 NRLSCSEVREFEYRA--SHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNL 640
           NRL+CSEVREFEY+   S + D +  D     T + L  +F KLLC  S +T      N 
Sbjct: 538 NRLACSEVREFEYKVAESQVFDREADDES---TIDILEARFVKLLCSKSENTSPV-SGND 593

Query: 641 SDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA 700
           SD+SQL+ KIS LL + +D  D ML      + S E +K  L+Q+ LKE L  WL+QK A
Sbjct: 594 SDLSQLSEKISLLLFENDDQLDQMLM----NEISQENMKNNLLQEFLKESLHSWLLQKIA 649

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           EGGKGP VLD  GQGVLHFAA+LGY+WALEPT +AGV+++FRDVNGWTALHWAA+ GRER
Sbjct: 650 EGGKGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRER 709

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820
            + SLIALGAAPG L+DP P +PSG TP+DLA + GHKGIAGYL+E  L + +S +SLN 
Sbjct: 710 IIGSLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND 769

Query: 821 KDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSR 880
           K+ +  E+  + +  +                   + DSL AVRNATQAAARIHQVFR++
Sbjct: 770 KNAETVEMAPSPSSSS-------------------LTDSLTAVRNATQAAARIHQVFRAQ 810

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1

 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/891 (44%), Positives = 536/891 (60%), Gaps = 77/891 (8%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MAD   F    +LDI+Q+L EAQHRWLRPAEICEILRN+ KF IA E P+ PPSGSLFLF
Sbjct: 1   MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHE+LK GS+DVLHCYYAHGE+NENFQRR YWML
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           E++L HIV VHY EVKGNR           +T  ++EN     ++ + G+        S 
Sbjct: 121 EQDLMHIVFVHYLEVKGNRM----------STSGTKENH----SNSLSGT-------GSV 159

Query: 181 QMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSS 240
            + S    +S+ S      EDA+S  + QASS      + Q  V + +       ++ ++
Sbjct: 160 NVDSTATRSSILSPLC---EDADSGDSRQASSSLQQNPEPQTVVPQIM-------HHQNA 209

Query: 241 LTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNC------ 294
            T N     SV+   D  + A  ++ + SN        Q++ D P+W+   +N       
Sbjct: 210 STINSYNTTSVLGNRDGWTSAHGNRVKGSNS-------QRSGDVPAWDASFENSLARYQN 262

Query: 295 ----SQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHL 350
               +    +QP   G IP +G    G   T+     +   + LQ++  WQ    +S  L
Sbjct: 263 LPYNAPLTQTQPSTFGLIPMEGKTEKGSLLTS-----EHLRNPLQSQVNWQTPVQESVPL 317

Query: 351 SNWPMDQKVYLDSAHDLTSQSCEQGAAHD-GLLDSLRPPHAHPNMENDVHEQLPNAEHGH 409
             WPMD    +  A DL      QGA  + G   SL       +          N E  +
Sbjct: 318 QKWPMDSHSGMTDATDLALFG--QGAHENFGTFSSLLGSQDQQSSSFQA--PFTNNEAAY 373

Query: 410 LLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSS 469
           + K  PE  L  +  +  +  +++ L+    + LKK+DSF+RW+SKELG++++  MQSSS
Sbjct: 374 IPKLGPE-DLIYEASANQTLPLRKALLK-KEDSLKKVDSFSRWVSKELGEMEDLQMQSSS 431

Query: 470 GAY-WETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLI 528
           G   W +VE EN    S            +SPSLS+DQ +++IDF P W    SEV+V++
Sbjct: 432 GGIAWTSVECENAAAGSS-----------LSPSLSEDQRFTMIDFWPKWTQTDSEVEVMV 480

Query: 529 TGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCS 588
            G FL+S QE  +  WSCMFGE+EVPA+I+  GVL CH    +VGRVPFY+TCS+R SCS
Sbjct: 481 IGTFLLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCS 540

Query: 589 EVREFEYRASHIPDVDVADNCGDITSE-NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLN 647
           EVREF++       ++  D  G  T E +L ++F  LL L      ++   N+ +  +  
Sbjct: 541 EVREFDFLPGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKI 600

Query: 648 SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPC 707
           SKI  LLKDE +     L  T E+  +  E KE+L+++  ++KL +WL+ K  E GKGP 
Sbjct: 601 SKI-MLLKDEKEP---PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPN 656

Query: 708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA 767
           +LD  GQGVLH AAALGYDWA++P   AGV+INFRD NGW+ALHWAA+ GRE TVA L++
Sbjct: 657 ILDEDGQGVLHLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVS 716

Query: 768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 827
           LGA  GAL+DP+P++P G+T ADLA   GH+GI+G+LAES L+S L  ++++ K+   A+
Sbjct: 717 LGADAGALADPSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTVDAKENSSAD 776

Query: 828 VTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR 878
            +GA AV TV +R  TP+S GD+P  LSMKDSL AV NATQAA R+HQVFR
Sbjct: 777 SSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFR 827

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2

 Score =  425 bits (1093), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/446 (48%), Positives = 299/446 (67%), Gaps = 17/446 (3%)

Query: 435 LIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSSG-AYWETVESENGVDDSGVSPQARL 493
           ++  S + LKK+DSF++W  KELG++++  MQSS G   W TVE E     +G+S     
Sbjct: 348 ILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRGDIAWTTVECETAA--AGIS----- 400

Query: 494 DTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEV 553
               +SPSLS+DQ ++I+DF P  A   +EV+V++ G FL+S QE     WSCMFGE+EV
Sbjct: 401 ----LSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVTKYNWSCMFGEVEV 456

Query: 554 PAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 613
           PAEI+  GVL CH      G VPFYVTCSNR +CSEVREF++ +     ++  D  G  T
Sbjct: 457 PAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQKINATDVYGTYT 516

Query: 614 SE-NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEK 672
           +E +L+++F K+L        ++   ++ D  +  SKI  LLK+E +    +L  T +  
Sbjct: 517 NEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIM-LLKEEKE---YLLPGTYQRD 572

Query: 673 FSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPT 732
            + +E K +L ++L +E+L +WL+ K  E GKGP +LD  GQG+LHF AALGYDWA++P 
Sbjct: 573 STKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAALGYDWAIKPV 632

Query: 733 TVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
             AGVNINFRD NGW+ALHWAA+ GRE TVA L++LGA  GAL+DP+P+ P G+T ADLA
Sbjct: 633 LAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELPLGKTAADLA 692

Query: 793 SSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPY 852
            + GH+GI+G+LAES L+S L  ++++ K+   A   G  AVQTV +R   P++ GD+P 
Sbjct: 693 YANGHRGISGFLAESSLTSYLEKLTVDSKENSPANSCGEKAVQTVSERTAAPMTYGDVPE 752

Query: 853 GLSMKDSLAAVRNATQAAARIHQVFR 878
            LS+KDSL AVRNATQAA R+HQVFR
Sbjct: 753 KLSLKDSLTAVRNATQAADRLHQVFR 778

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1

 Score =  242 bits (618), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 212/368 (57%), Gaps = 16/368 (4%)

Query: 498 MSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEI 557
           M  + + +Q ++I D SP+W Y +   KV+I G FL    E+    WSCMFG  +VP EI
Sbjct: 436 MRVTGAHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTES---TWSCMFGNAQVPFEI 492

Query: 558 VAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENL 617
           +  GV+RC       G+V   +T  + L CSE+REFEYR    PD      C +  + ++
Sbjct: 493 IKEGVIRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREK--PDT-CCPKCSEPQTSDM 549

Query: 618 RMQFGKLLCLTS-VSTPNYDPSN--LSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFS 674
                +L+ L   V T   D S+   S++   N K+ + LK ++D W  ++    +   S
Sbjct: 550 STSPNELILLVRFVQTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGSAS 609

Query: 675 SEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV 734
           S    + L+Q+LLK+KL  WL  ++ +     C L    QG++H  A LG++WA  P   
Sbjct: 610 STSTVDWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILA 669

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
            GVN++FRD+ GW+ALHWAA  G E+ VA+LIA GA+ GA++DP+ + P+G+T A +A+S
Sbjct: 670 HGVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAAS 729

Query: 795 IGHKGIAGYLAESDLSSALSAISLNKKDG--DVAEVTGATAVQTVPQRCPTPVSDGDLPY 852
            GHKG+AGYL+E  L++ LS+++L + +   D A+V     + ++ ++ P+   D     
Sbjct: 730 NGHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQSPSGNED----- 784

Query: 853 GLSMKDSL 860
            +S+KD+L
Sbjct: 785 QVSLKDTL 792

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSP8|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1

 Score =  209 bits (532), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 162/501 (32%), Positives = 247/501 (49%), Gaps = 54/501 (10%)

Query: 416 ESSLTIDGKSFYSSAIK-------QH----LIDGSTEGL-----KKLDSFNRWMSKELGD 459
           +S+ T+D  S+++  ++       +H    + DGS + L     +  +SF RWM+     
Sbjct: 190 QSAPTVDNLSYFTEPLQNAANGTAEHGNATVADGSLDALLNDGPQSRESFGRWMN---SF 246

Query: 460 VKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAY 519
           + ESN      ++   V          ++PQA   ++   P    +Q+++I D SP WAY
Sbjct: 247 ISESNGSLEDPSFEPMVMPRQ----DPLAPQAVFHSHSNIP----EQVFNITDVSPAWAY 298

Query: 520 VSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYV 579
            S + K+L+TG    S Q  E     C+ G+  VPAE +  GV RC       G V  Y+
Sbjct: 299 SSEKTKILVTGFLHDSYQHLERSNLYCVCGDFCVPAEYLQAGVYRCIIPPHSPGMVNLYL 358

Query: 580 TCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQ--FGKLLCLTS----VSTP 633
           +       S+   FE+RA  + D  V ++  D   E    Q     LL  +S    V + 
Sbjct: 359 SADGHKPISQCFRFEHRAVPVLDKTVPEDNQDSKWEEFEFQVRLSHLLFTSSNKLNVLSS 418

Query: 634 NYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV 693
              P NL D  +L SK + LL    + W  ++K     K S ++ K+ L +  LK +L+ 
Sbjct: 419 KISPHNLRDAKKLASKTNHLL----NSWAYLVKSIQGNKVSFDQAKDHLFELSLKNRLKE 474

Query: 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753
           WL++K  EG +     D  G GV+H  A+LGY W+++  +++G+++NFRD  GWTALHWA
Sbjct: 475 WLMEKVLEG-RNTLDYDSKGLGVIHLCASLGYTWSVQLFSLSGLSLNFRDKQGWTALHWA 533

Query: 754 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSAL 813
           AY GRE+ VA+L++ GA P  ++D T     G   ADLA   G+ G+A YLAE  L +  
Sbjct: 534 AYYGREKMVAALLSAGARPNLVTDSTKDNLGGCMAADLAQQNGYDGLAAYLAEKCLVAQF 593

Query: 814 SAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYG-LSMKDSLAAVRNATQAAAR 872
             + +    G++     A   + + Q        G LP    S+KD+LAA R A +AAAR
Sbjct: 594 RDMKIA---GNITGDLEACKAEMLNQ--------GTLPEDEQSLKDALAAYRTAAEAAAR 642

Query: 873 IHQVFRSR----PRSQVITMS 889
           I   FR +     RS VI  +
Sbjct: 643 IQGAFREKALKAARSSVIQFA 663

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2

 Score =  195 bits (496), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 214/443 (48%), Gaps = 31/443 (6%)

Query: 442 GLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPS 501
           G    DSF RW++  + D   S    S  A +   +      DS   P     T   S S
Sbjct: 318 GYGSQDSFGRWVNNFISDSPGSVDDPSLEAVYTPGQ------DSSTPP-----TVFHSHS 366

Query: 502 LSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGG 561
              +Q+++I D SP WAY + + K+L+TG F  S Q        C+ GE+ VPAE +  G
Sbjct: 367 DIPEQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQMG 426

Query: 562 VLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVA--DNCGDITSENLRM 619
           V RC    Q  G V  Y++       S++  FE+R+    +  +   D          ++
Sbjct: 427 VYRCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEFQV 486

Query: 620 QFGKLLCLTS----VSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSS 675
           +   LL  +S    V T    P NL +  +L S+ S LL    + W  ++K     +   
Sbjct: 487 RLAHLLFTSSNKISVLTSKISPENLLEAKKLASRTSHLL----NSWAYLMKSIQANEVPF 542

Query: 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA 735
           ++ ++ L +  LK +L+ WL++K  E  +     D  G GV+H  A LGY W++   + A
Sbjct: 543 DQARDHLFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILLFSWA 601

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
            ++++FRD  GWTALHWAAY GRE+ VA+L++ GA P  ++DPT ++  G T ADLA   
Sbjct: 602 NISLDFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQK 661

Query: 796 GHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLS 855
           G+ G+A +LAE  L +         KD   A            ++   P +  +     S
Sbjct: 662 GYDGLAAFLAEKCLVAQF-------KDMQTAGNISGNLETIKAEKSSNPGNANEEEQ--S 712

Query: 856 MKDSLAAVRNATQAAARIHQVFR 878
           +KD+LAA R A +AAARI   FR
Sbjct: 713 LKDTLAAYRTAAEAAARIQGAFR 735

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 5/119 (4%)

Query: 19  LIEAQHRWLRPAEICEILRNYTKFR-IAPESPHT-PPSGSLFLFDRKVLRYFRKDGHNWR 76
           L + +HRW    EI   L  + K       SP T P +GS+ L++RK ++Y RKDG+ W+
Sbjct: 67  LPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWK 125

Query: 77  KKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
           K+KDGKT +E H +LK   V+ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct: 126 KRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQN--PDIVLVHYLNV 182

Transcriptional activator. May act as a tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|A2A891|CMTA1_MOUSE Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 5/119 (4%)

Query: 19  LIEAQHRWLRPAEICEILRNYTKFR-IAPESPHT-PPSGSLFLFDRKVLRYFRKDGHNWR 76
           L + +HRW    EI   L  + K       SP T P +GS+ L++RK ++Y RKDG+ W+
Sbjct: 67  LPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWK 125

Query: 77  KKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
           K+KDGKT +E H +LK   V+ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct: 126 KRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQN--PDIVLVHYLNV 182

Transcriptional activator.

Mus musculus (taxid: 10090)

>sp|O94983|CMTA2_HUMAN Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 18  ILIEAQHRWLRPAEICEILRNYTK----FRIAPESPHTPPSGSLFLFDRKVLRYFRKDGH 73
           +L   + RW    EI   L  + K       AP++   P +GS+ L++RK ++Y RKDG+
Sbjct: 33  LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGY 89

Query: 74  NWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYR 133
            W+K+KDGKT +E H +LK   ++ L+  Y H      F RR YW+L+     IVLVHY 
Sbjct: 90  LWKKRKDGKTTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQN--PDIVLVHYL 147

Query: 134 EV 135
            V
Sbjct: 148 NV 149

Transcription activator. May act as tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|Q80Y50|CMTA2_MOUSE Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 14/127 (11%)

Query: 18  ILIEAQHRWLRPAEICEILRNYTK----FRIAPESPHTPPSGSLFLFDRKVLRYFRKDGH 73
           +L   + RW    EI   L  + K       AP++   P +GS+ L++RK ++Y RKDG+
Sbjct: 33  LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGY 89

Query: 74  NWRKKKDGKTVKEAHERLKAGSVD-----VLHCYYAHGEENENFQRRSYWMLEEELSHIV 128
            W+K+KDGKT +E H +LK   ++      L+  Y H      F RR YW+L+     IV
Sbjct: 90  LWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLLQN--PDIV 147

Query: 129 LVHYREV 135
           LVHY  V
Sbjct: 148 LVHYLNV 154

Transcription activator. May act as tumor suppressor.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	911
224096175	1007	predicted protein [Populus trichocarpa]	0.878	0.794	0.626	0.0
297742873	1243	unnamed protein product [Vitis vinifera]	0.895	0.656	0.639	0.0
356511089	1107	PREDICTED: calmodulin-binding transcript	0.953	0.785	0.589	0.0
301030829	1097	calmodulin-binding protein [Solanum lyco	0.949	0.788	0.6	0.0
356528461	1115	PREDICTED: calmodulin-binding transcript	0.949	0.775	0.572	0.0
30681670	1032	calmodulin-binding transcription activat	0.867	0.765	0.494	0.0
110741068	1032	Calmodulin-binding transcription activat	0.867	0.765	0.493	0.0
297821451	1031	hypothetical protein ARALYDRAFT_481093 [	0.871	0.770	0.494	0.0
356557555	1088	PREDICTED: calmodulin-binding transcript	0.926	0.775	0.470	0.0
356528046	1079	PREDICTED: calmodulin-binding transcript	0.923	0.779	0.469	0.0

>gi|224096175|ref|XP_002310562.1| predicted protein [Populus trichocarpa] gi|222853465|gb|EEE91012.1| predicted protein [Populus trichocarpa]

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/878 (62%), Positives = 655/878 (74%), Gaps = 78/878 (8%)

Query: 14  DIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGH 73
           DI+QIL+EAQHRWLRPAEICEIL NY +FRIAPE  H PPSGSLFLFDRKVLRYFRKDGH
Sbjct: 1   DIQQILLEAQHRWLRPAEICEILTNYQRFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGH 60

Query: 74  NWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYR 133
           NWRKKKDGKTVKEAHERLK+GSVDVLHCYYAHGE+NENFQRRSYW+LEEELSHIVLVHYR
Sbjct: 61  NWRKKKDGKTVKEAHERLKSGSVDVLHCYYAHGEDNENFQRRSYWLLEEELSHIVLVHYR 120

Query: 134 EVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTAD-TSLN 192
           EVKG RTNFNR K  E   PYSQE E+T+P+SE++ S SS FHPN YQ+P++T D TS+N
Sbjct: 121 EVKGTRTNFNRIKEHEECIPYSQETEDTMPSSEMDTSVSSRFHPNGYQVPTRTTDTTSMN 180

Query: 193 SAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVV 252
           SAQASEYEDAESVYNNQASS FHSFL++Q+P  E+ID G +  Y   + +++YQGK S V
Sbjct: 181 SAQASEYEDAESVYNNQASSTFHSFLEVQKPAMERIDTGSSVHYDHMTFSSDYQGKLSAV 240

Query: 253 PGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQP--------EA 304
           PG D IS AQ DK++ +N T    EPQK +D PSWEDVL+N ++G  S P        + 
Sbjct: 241 PGMDVISLAQVDKTKETNGTESACEPQKVIDLPSWEDVLENYARGTESVPFQTLLSQDDT 300

Query: 305 LGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSA 364
           +G IP Q   IL +  TNSF +R++ G                                 
Sbjct: 301 VGIIPKQEDGILEKLLTNSFDKREDIGR-------------------------------- 328

Query: 365 HDLTSQSCEQGAAHDGLLDSLRPPHAHPN---MENDVHEQLPNAEHGHLLKSDPESSLTI 421
           +DLT++  +Q      L+++L P     N   ++ND+  Q  NA+HG          +T+
Sbjct: 329 YDLTARFPDQQLDSGNLINTLEPLCTQENDLHIQNDIQIQPANADHG----------MTL 378

Query: 422 DGKSFYSSAIKQHLIDGS-TEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESEN 480
           +GKS YSS++K H++DGS TEGLKKLDSF RWMSKELGDV E  +QSSSG+YW T ESEN
Sbjct: 379 EGKSMYSSSVKHHILDGSGTEGLKKLDSFTRWMSKELGDV-EPQVQSSSGSYWITAESEN 437

Query: 481 GVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAE 540
           GVDDS    Q  LD Y++SPSLSQDQL+SIIDFSPNWAY  +E+KVLI GRFL  ++ AE
Sbjct: 438 GVDDSSNPSQGNLDAYLLSPSLSQDQLFSIIDFSPNWAYAGTEIKVLIMGRFLKGREAAE 497

Query: 541 NCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI 600
           NC+WS MFGE+EVPAE++A GVLRC+T S K GR+PFYVTCSNR++CSEVREFEY  SH 
Sbjct: 498 NCQWSIMFGEVEVPAEVIADGVLRCNTPSHKAGRIPFYVTCSNRVACSEVREFEY-LSHT 556

Query: 601 PDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDD 660
            D+       D  +E+L M+FGKLL L+SVS   YD S++ +I  L+SKI+SLL ++N+ 
Sbjct: 557 QDITYY--YSDSVTEDLNMRFGKLLSLSSVSPSKYDSSSVDEI--LSSKINSLLNEDNET 612

Query: 661 WDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFA 720
           WD M KLT+EE FSSE+VKE+LVQKLLKE+L VWL+QKA+EGGKGP VLD  GQGVLHFA
Sbjct: 613 WDQMFKLTSEEGFSSEKVKEQLVQKLLKEQLHVWLLQKASEGGKGPSVLDEGGQGVLHFA 672

Query: 721 AALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTP 780
           AALGYDWALEPT VAGV++NFRDVNGWTALHWAA  GRERTVASLI LGAAPGAL+DPTP
Sbjct: 673 AALGYDWALEPTIVAGVSVNFRDVNGWTALHWAASYGRERTVASLIHLGAAPGALTDPTP 732

Query: 781 KYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQR 840
           KYP+ RTPADLAS+ GHKGI+G+LAES LS+ LS+++L K+DG  AE             
Sbjct: 733 KYPTSRTPADLASANGHKGISGFLAESALSAHLSSLNLEKQDGKAAE------------- 779

Query: 841 CPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR 878
                +D DLP  L +KDSLAAV NATQAAARIHQVFR
Sbjct: 780 ----FNDADLPSRLPLKDSLAAVCNATQAAARIHQVFR 813

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742873|emb|CBI35638.3| unnamed protein product [Vitis vinifera]

 Score = 1044 bits (2700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/879 (63%), Positives = 655/879 (74%), Gaps = 63/879 (7%)

Query: 54   SGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQ 113
            SGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGS+DVLHCYYAHGE+NENFQ
Sbjct: 225  SGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQ 284

Query: 114  RRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSS 173
            RRSYWMLEEELSHIVLVHYREVKGNRT+FNR K  EGA   SQE EE +PNSE + S SS
Sbjct: 285  RRSYWMLEEELSHIVLVHYREVKGNRTSFNRIKETEGALINSQETEEVVPNSETDCSVSS 344

Query: 174  GFHPNSYQMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGL 232
             F  NSYQM SQT DT SLNSAQASEYEDAES YN+QASSR HSFL   +PV EK DA L
Sbjct: 345  SFPMNSYQMASQTTDTTSLNSAQASEYEDAESAYNHQASSRLHSFL---EPVMEKGDA-L 400

Query: 233  ADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQ 292
              PYYP+  +N+YQGK  + PGADF S AQ   S++SN  G++YE  KNLDFPSWEDVL+
Sbjct: 401  TAPYYPAPFSNDYQGKLDI-PGADFTSLAQESSSKDSNSVGISYELPKNLDFPSWEDVLE 459

Query: 293  NCSQGVGSQP----------EALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQA 342
            NC+ GV S P          + +G IP Q  +IL +  T+SF  ++EFGS  Q + EWQ 
Sbjct: 460  NCNAGVQSMPSQTPFSSTRADTMGIIPKQENEILMQLLTDSFSRKQEFGSDPQGQDEWQT 519

Query: 343  SRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQL 402
            S   S+HLS WP DQK++ DSA+ L+++   Q A    LL+SL P HA+P+ +       
Sbjct: 520  SEGYSAHLSKWPGDQKLHSDSAYGLSTRFDIQEANCVDLLNSLEPGHAYPDGQ------- 572

Query: 403  PNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV 460
                                 K+ YSSA+KQ L+D S   EGLKK+DSFNRWMSKELGDV
Sbjct: 573  ---------------------KANYSSALKQPLLDSSLTEEGLKKVDSFNRWMSKELGDV 611

Query: 461  KESNMQS---SSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNW 517
             ES+MQS   SS AYW+TVESENGVD+S +SPQ  LDTYM+ PSLSQDQL+SIIDFSPNW
Sbjct: 612  NESHMQSRLSSSAAYWDTVESENGVDESSISPQGHLDTYMLGPSLSQDQLFSIIDFSPNW 671

Query: 518  AYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPF 577
            AY  SEVKVLI G+FL  QQ+AE CKWSCMFGE+EVPAE+++ GVLRCHT   K  RVPF
Sbjct: 672  AYAGSEVKVLIMGKFLKGQQDAEKCKWSCMFGEVEVPAEVISDGVLRCHTPIHKAERVPF 731

Query: 578  YVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENL-RMQFGKLLCLTSVSTPNYD 636
            YVTCSNRL+CSEVREFEYR +HI DVD AD     TSE L  M+F KLL L   S  N  
Sbjct: 732  YVTCSNRLACSEVREFEYRVNHIRDVDTADVSSGSTSEILLHMRFVKLLSLAPSS--NSG 789

Query: 637  PSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 696
             SN  D   LNSKI+SL++++ND+W+ ML LT+EE FS E+ KE+L+QKLLKEKL VWL+
Sbjct: 790  LSNEGDRFPLNSKINSLMEEDNDEWEQMLMLTSEE-FSPEKAKEQLLQKLLKEKLHVWLL 848

Query: 697  QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756
            QKAAEGGKGP VLD  GQGVLHFAAALGYDWA+ PTT AGV++NFRDVNGWTALHWAA+C
Sbjct: 849  QKAAEGGKGPNVLDEDGQGVLHFAAALGYDWAIPPTTAAGVSVNFRDVNGWTALHWAAFC 908

Query: 757  GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAI 816
            GRERTV  LI+ GAAPGAL+DPTPKYP+GRTPADLASS GHKGIAGYLAES LS+ L ++
Sbjct: 909  GRERTVPFLISQGAAPGALTDPTPKYPAGRTPADLASSNGHKGIAGYLAESALSAHLQSL 968

Query: 817  SLNK-KDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQ 875
             L + K+ D AE++G  AVQT+ +R PTP+S GDLP    +KDSLAAV NATQAAARIHQ
Sbjct: 969  HLKETKEADAAEISGIKAVQTISERSPTPISTGDLP----LKDSLAAVCNATQAAARIHQ 1024

Query: 876  VFR-----SRPRSQVITMSLCMLLQHEYKISSVVGRVGK 909
            VFR      + + +       M  +H   + +V  R+G+
Sbjct: 1025 VFRVQSFQKKQQKEYDDGKFGMSDEHALSLIAVKSRLGQ 1063

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511089|ref|XP_003524262.1| PREDICTED: calmodulin-binding transcription activator 3-like [Glycine max]

 Score = 1008 bits (2607), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/897 (58%), Positives = 651/897 (72%), Gaps = 28/897 (3%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++R +   +QLDI+QI++EAQHRWLRPAEIC IL N+ KF IA E  H PPSGSLFLF
Sbjct: 1   MAEARHYVPPSQLDIKQIILEAQHRWLRPAEICAILSNHKKFLIASEPAHMPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTV+EAHERLKAGSVDVLHCYYAHGEENENF+RR+YW+L
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFRRRTYWLL 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           EEELSHIVLVHYR VKG + NF  AK  E   PY+Q+ ++ +P +E+E S SS  HP+SY
Sbjct: 121 EEELSHIVLVHYRHVKGTKANFTCAKENEETLPYAQQTDKIMPKTEMETSLSSTLHPHSY 180

Query: 181 QMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSS 240
           Q+PSQT D S+NS+QASEYE+AES +NN ASS F+SFL+L++PV EKI    AD Y P  
Sbjct: 181 QVPSQTMDRSMNSSQASEYEEAESAFNNHASSEFYSFLELERPV-EKITPQPADSYSPRP 239

Query: 241 LTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQN--CSQGV 298
           LTN+ Q K  V+PG ++IS  Q +K ++ ++ GLTYE  K L F SWE +L+N   SQ V
Sbjct: 240 LTND-QEKSPVIPGVNYISLTQDNKIKDIHNFGLTYESPKPLGFSSWEGILKNNAGSQHV 298

Query: 299 GSQPEALGDIPN---------QGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSH 349
             QP   G  P+         QG++I+    T S  ++ E GS +Q  G WQA   DS  
Sbjct: 299 PFQPLFPGTQPDNMGINSKFSQGHEIMVPYLTTSIAKQHENGSLIQAEGNWQAYDVDSLR 358

Query: 350 LSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPN------MENDVHEQLP 403
           +S+WP+D   Y  S+ D+T  + EQ      L  SL     HP       M+ND  E+L 
Sbjct: 359 MSSWPID-SAYSGSSCDITCSNREQEVNDVDLQKSLEQCLLHPYKQNKVFMQNDPQEKLL 417

Query: 404 NAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGS--TEGLKKLDSFNRWMSKELGDVK 461
           N +    +KSD E++  +DG        K+ L+DGS   EGLKKLDSFN+WMSKEL DV+
Sbjct: 418 NEKEK--IKSDLEANRILDGIEDTYFTFKRTLLDGSPAEEGLKKLDSFNQWMSKELADVE 475

Query: 462 ESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVS 521
           ESN  S+SG YW+TVESEN V ++ +  Q  LDTY++ PS+S DQL+SIID+SP+WA+  
Sbjct: 476 ESNKPSTSGGYWDTVESENEVGNTTIPSQGHLDTYVLDPSVSHDQLFSIIDYSPSWAFEG 535

Query: 522 SEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTC 581
           SE+KV+I+GRFL SQ EAE  KWSCMFGE+EVPAEI+A GVL CHT   K GRVPFYVTC
Sbjct: 536 SEIKVIISGRFLRSQHEAEQGKWSCMFGEVEVPAEIIAKGVLCCHTPPHKAGRVPFYVTC 595

Query: 582 SNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLS 641
           SNRL+CSEVREF+++ ++ P+V+        T +   ++FG+LL L      N D  ++S
Sbjct: 596 SNRLACSEVREFDFQVNYTPEVNTTGENRGSTFDTFSIRFGELLSLGHAFPQNSDSISVS 655

Query: 642 DISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAE 701
           + SQL SKI+SLL++E DDWD +LKLT EE FS E ++E+L+Q LLK+KL  WL+QK  E
Sbjct: 656 EKSQLRSKINSLLREEEDDWDKLLKLTQEEDFSPENLQEQLLQNLLKDKLHAWLLQKITE 715

Query: 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 761
            GKGP +LD  GQGVLHFA+ALGYDWALEPT VAGVN+NFRDVNGWTALHWAA+CGRERT
Sbjct: 716 EGKGPNILDEGGQGVLHFASALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERT 775

Query: 762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 821
           VA LI+LGAAPGAL+DP P++PSGRTPADLAS+ GHKGIAGYLAES LS+ L+ + LN+ 
Sbjct: 776 VAFLISLGAAPGALTDPCPEHPSGRTPADLASANGHKGIAGYLAESSLSAHLTTLDLNR- 834

Query: 822 DGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR 878
             D  E +GA  VQ V         DG L Y LS+KDSLAAVRNAT AAARIHQVFR
Sbjct: 835 --DAGENSGAKVVQRVQNIAQVNDLDG-LSYELSLKDSLAAVRNATHAAARIHQVFR 888

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|301030829|gb|ADK47999.1| calmodulin-binding protein [Solanum lycopersicum]

 Score =  999 bits (2583), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/895 (60%), Positives = 653/895 (72%), Gaps = 30/895 (3%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MADSRR+ L  QLDIEQIL+EAQHRWLRPAEICEIL+NY KFRIAPE P+ PPSGSLFLF
Sbjct: 1   MADSRRYGLNAQLDIEQILLEAQHRWLRPAEICEILKNYQKFRIAPEPPNRPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGH+WRKK+DGKTVKEAHERLKAGS+DVLHCYYAHGEENENFQRRSYWML
Sbjct: 61  DRKVLRYFRKDGHSWRKKRDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYWML 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           EEE+SHIVLVHYREVKGNRTNF+R +  +  TP  QE +E + +SEV+ S S+ F+PN Y
Sbjct: 121 EEEMSHIVLVHYREVKGNRTNFSRIREPQQVTPDLQETDEDVHSSEVDSSASAKFYPNDY 180

Query: 181 QMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPS 239
           Q+ SQ  DT S +SAQASEYEDAESVYN   +S FHSFLD Q    +    GLA PY+P 
Sbjct: 181 QVNSQVTDTTSFSSAQASEYEDAESVYNQHPTSGFHSFLDAQPSAGD----GLAVPYHPI 236

Query: 240 SLTNNYQGKFSVVPGADF--ISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQN---C 294
             +N+ Q +F+   G  F  I P   + S     T  TY P +NLDF SW  +  N    
Sbjct: 237 PFSND-QVQFAGSSGTSFSSIPPGNGNTS-----TANTYVPSRNLDFASWGTISVNNPAA 290

Query: 295 SQGVGSQPEALGDIPN----QGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHL 350
            Q +  QP       N    QG   +G+  +N F  R+E  +H+   G WQ S  DSS +
Sbjct: 291 YQSLHFQPSGQSSANNMMHEQGNTTMGQICSNDF-TRQEHENHIDGLGNWQTSEVDSSFI 349

Query: 351 SNWPMDQKVYLD-SAHDLTSQSCEQGAAHDGLLDS--LRPPH--AHPNMENDVHEQLPNA 405
           S W MDQK+  D ++      S   G  H   L++  L P     HP ++N++  QL +A
Sbjct: 350 SKWSMDQKLNPDLTSGQTIGSSGVYGVEHHNSLEASQLLPAQQDKHP-IQNELQSQLSDA 408

Query: 406 EHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDG--STEGLKKLDSFNRWMSKELGDVKES 463
             G  L +D + +L++  K+ YS A+KQ L+DG    EGLKKLDSF+RW+SKELGDV ES
Sbjct: 409 NIGGSLNADLDHNLSLGVKTDYS-ALKQPLLDGVLKREGLKKLDSFDRWVSKELGDVSES 467

Query: 464 NMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSE 523
           +MQS+S +YW+ V  E+GV +S ++ Q +LDTY++SPSL+QDQ++SIIDFSPNWA+  SE
Sbjct: 468 HMQSNSSSYWDNVGDEDGVGNSTIASQVQLDTYVLSPSLAQDQIFSIIDFSPNWAFSGSE 527

Query: 524 VKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSN 583
           +KVLITGRFL SQQE ENC W+CMFGE+EVPAE++A GVLRCHT  QK GRVPFY+TCSN
Sbjct: 528 IKVLITGRFLKSQQEVENCSWACMFGELEVPAEVIADGVLRCHTPVQKAGRVPFYITCSN 587

Query: 584 RLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDI 643
           RL+CSEVREFE+R +   DV    N    +   L M+FGKLL L S  +    P +  ++
Sbjct: 588 RLACSEVREFEFRVTEGQDVVANPNSCSSSESLLHMRFGKLLSLESFVSQTSPPISEDNV 647

Query: 644 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG 703
           S ++SKI+SLL+D++++W+ ML LT E  F +E+VK++L+QKLLKEKL VWL+QK AEGG
Sbjct: 648 SYISSKINSLLRDDDNEWEEMLHLTNENNFMAEKVKDQLLQKLLKEKLHVWLLQKVAEGG 707

Query: 704 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763
           KGP +LD  GQGVLHFAAALGYDWA+ PT  AGV++NFRDVNGWTALHWAA  GRERTV 
Sbjct: 708 KGPNILDEGGQGVLHFAAALGYDWAVPPTIAAGVSVNFRDVNGWTALHWAASYGRERTVG 767

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 823
            LI+LGAA GAL+DPTPK+PSGRTPADLASS GHKGIAGYLAES LSS L ++ L +K  
Sbjct: 768 FLISLGAATGALTDPTPKHPSGRTPADLASSNGHKGIAGYLAESSLSSHLFSLELKEKKQ 827

Query: 824 DVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR 878
              E     AVQTV +R  TP  DGD  +G+S+KDSLAAVRNATQAAARIHQVFR
Sbjct: 828 GENEQAFGEAVQTVSERTATPAWDGDWSHGVSLKDSLAAVRNATQAAARIHQVFR 882

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528461|ref|XP_003532821.1| PREDICTED: calmodulin-binding transcription activator 3-like [Glycine max]

 Score =  987 bits (2551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/911 (57%), Positives = 653/911 (71%), Gaps = 46/911 (5%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++R +A  +QLDI+QI++EAQHRWLRPAEIC IL NY KFRIAPE  H PPSGSLFLF
Sbjct: 1   MAEARLYAPPSQLDIKQIILEAQHRWLRPAEICAILGNYKKFRIAPEPAHMPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLR+FRKDGHNWRKKKDGKTV+EAHERLKAGSVDVLHCYYAHGEENENFQRR+YW+L
Sbjct: 61  DRKVLRHFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYWLL 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           EEELSHIVLVHYR+VKG + NF  AK  E + PY+Q+ ++ +P +E++ S SS  HP+SY
Sbjct: 121 EEELSHIVLVHYRQVKGTKANFTSAKENEESLPYAQQTDKIMPQTEMDTSLSSTLHPHSY 180

Query: 181 QMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSS 240
           Q+PS+T DTS+NSAQ SEYE+AES +NN ASS F+SFL+LQ+PV EKI    AD Y P  
Sbjct: 181 QVPSKTVDTSMNSAQTSEYEEAESAFNNHASSEFYSFLELQRPV-EKISPQPADFYSPRP 239

Query: 241 LT--------------NNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPS 286
           L                + Q K  ++PG ++IS  Q +K+++  + GLTYE  K L F S
Sbjct: 240 LIRKSVPNMNHIIETGTDDQEKLPIIPGVNYISLTQDNKNKDILNAGLTYESPKPLGFSS 299

Query: 287 WEDVLQN--CSQGV-------GSQPEALGDIPN--QGYDILGEPFTNSFGERKEFGSHLQ 335
           WE +L+N   SQ V       G+QP+ +G   N  QG +I+    T S  ++ E GS ++
Sbjct: 300 WEGILENNAGSQHVHFQPLFPGTQPDNMGINSNFSQGEEIMVPYLTTSIAKQHENGSIIK 359

Query: 336 TRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRP--PHAHPN 393
             G WQ    DS  +S+WP+D   Y  S  +++  +CEQ         SL     H+H  
Sbjct: 360 AEGNWQVYDVDSLRMSSWPID-SAYSGSTCEVSCSNCEQEVNDVDFQKSLEQCLLHSHKQ 418

Query: 394 ----MENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDG--STEGLKKLD 447
               M+ND+ E+L N       K   +S+L   G      + K+ L+DG  + EGLKKLD
Sbjct: 419 NKVLMQNDLQEKLLNE------KEKIKSNLEAYGIEDTYLSFKRTLLDGPPAEEGLKKLD 472

Query: 448 SFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQL 507
           SFN+WMSKELGDV+ESN  S+SG YW+TVE+EN V ++ +  Q  LDTY++ PS+S DQL
Sbjct: 473 SFNQWMSKELGDVEESNKPSTSGGYWDTVETENEVGNTTIPSQGHLDTYVLDPSVSHDQL 532

Query: 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHT 567
           +SIID+SP+WA+  SE+KV+I+G FL SQ EAE CKWSCMFGE+EVPA I+A GVL CHT
Sbjct: 533 FSIIDYSPSWAFEGSEIKVIISGEFLRSQHEAEQCKWSCMFGEVEVPAVIIAKGVLCCHT 592

Query: 568 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCL 627
              K GRVPFYVTCSNRL+CSEVREF+++  + P+    +N G  T +   ++FG+LL L
Sbjct: 593 PPHKAGRVPFYVTCSNRLACSEVREFDFQVHYTPEDTTGENRGS-TFDTFSIRFGELLSL 651

Query: 628 TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 687
                 N D  ++S+ SQL SKI+SLL++++DDWD +LKLT E+ FS E ++E+L+Q LL
Sbjct: 652 GHAFPQNSDSISVSEKSQLRSKINSLLREDDDDWDKLLKLTQEKDFSPENLREQLLQNLL 711

Query: 688 KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW 747
           K+KL  WL+QK  E GKGP VLD  GQGVLHFAAALGYDWALEPT VAGVN+NFRDVNGW
Sbjct: 712 KDKLHAWLLQKITEEGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGW 771

Query: 748 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 807
           T+LHWAA+CGRERTVA LI+LGAAPGAL+DP P++PSGRTPADLAS+ GHKGIAGYLAES
Sbjct: 772 TSLHWAAFCGRERTVAFLISLGAAPGALTDPCPEHPSGRTPADLASANGHKGIAGYLAES 831

Query: 808 DLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNAT 867
            LS+ L+ + LN+   D  E +GA  VQ +         DG L Y LS+KDSLAAV NAT
Sbjct: 832 SLSAHLTTLDLNR---DAGENSGAKVVQRLQNIAQVNDLDG-LSYELSLKDSLAAVCNAT 887

Query: 868 QAAARIHQVFR 878
           QAAARIHQVFR
Sbjct: 888 QAAARIHQVFR 898

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681670|ref|NP_850023.1| calmodulin-binding transcription activator 3 [Arabidopsis thaliana] gi|186502240|ref|NP_001118361.1| calmodulin-binding transcription activator 3 [Arabidopsis thaliana] gi|75328728|sp|Q8GSA7.1|CMTA3_ARATH RecName: Full=Calmodulin-binding transcription activator 3; AltName: Full=Ethylene-induced calmodulin-binding protein 1; Short=EICBP1; AltName: Full=Ethylene-induced calmodulin-binding protein a; Short=EICBP.a; AltName: Full=Signal-responsive protein 1 gi|25229116|gb|AAN74651.1| calmodulin-binding transcription factor SR1 [Arabidopsis thaliana] gi|27311707|gb|AAO00819.1| Unknown protein [Arabidopsis thaliana] gi|41056727|gb|AAR98746.1| ethylene-induced calmodulin-binding protein 1 [Arabidopsis thaliana] gi|330252195|gb|AEC07289.1| calmodulin-binding transcription activator 3 [Arabidopsis thaliana] gi|330252196|gb|AEC07290.1| calmodulin-binding transcription activator 3 [Arabidopsis thaliana]

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/900 (49%), Positives = 575/900 (63%), Gaps = 110/900 (12%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++RRF+  ++LD+ QIL EA+HRWLRP EICEIL+NY +F+I+ E P TP SGS+F+F
Sbjct: 1   MAEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHG++NENFQRRSYW+L
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121 EEELSHIVLVHYREVKGNR--TNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPN 178
           +EELSHIV VHY EVKG+R  T+FNR +  E A    QE  + +  SE +G  S  F+ N
Sbjct: 121 QEELSHIVFVHYLEVKGSRVSTSFNRMQRTEDAARSPQETGDAL-TSEHDGYASCSFNQN 179

Query: 179 SYQMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYY 237
            +   SQT D+ S+N   + E EDAES YN   SS  +S  +LQQP       G  DPYY
Sbjct: 180 DHSNHSQTTDSASVNGFHSPELEDAESAYNQHGSSTAYSHQELQQPATGGNLTGF-DPYY 238

Query: 238 PSSLT--NNYQGKFSVVPGADFISPAQTDKSRNSNDTGLT--YEPQKNLDFPSWEDVLQN 293
             SLT  ++YQ +   +P  D  S    DKS+  N  G+T   + +K++D  +WE++L N
Sbjct: 239 QISLTPRDSYQKELRTIPVTD--SSIMVDKSKTINSPGVTNGLKNRKSIDSQTWEEILGN 296

Query: 294 CSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSN- 352
           C  GV    EAL   PN  +++L +   +SF   ++F S  ++  + Q    +S   S+ 
Sbjct: 297 CGSGV----EALPLQPNSEHEVLDQILESSF-TMQDFASLQESMVKSQNQELNSGLTSDR 351

Query: 353 --WPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHL 410
             W   Q + L++  +L S                             +E+ P       
Sbjct: 352 TVWFQGQDMELNAISNLAS-----------------------------NEKAP------- 375

Query: 411 LKSDPESSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV------KE 462
                           Y S +KQHL+ G+   EGLKK+DSFNRWMSKELGDV       E
Sbjct: 376 ----------------YLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANE 419

Query: 463 SNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSS 522
           S  QSSS  YWE VESE+G   +G + +  +D Y+MSPSLS++QL+SI DFSP+WAYV  
Sbjct: 420 SFTQSSSRTYWEEVESEDG--SNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGC 477

Query: 523 EVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCS 582
           EV V +TG+FL +++E E  +WSCMFG+ EVPA++++ G+L+C     + GRVPFYVTCS
Sbjct: 478 EVVVFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCS 537

Query: 583 NRLSCSEVREFEYRA--SHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNL 640
           NRL+CSEVREFEY+   S + D +  D     T + L  +F KLLC  S +T      N 
Sbjct: 538 NRLACSEVREFEYKVAESQVFDREADDES---TIDILEARFVKLLCSKSENTSPV-SGND 593

Query: 641 SDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA 700
           SD+SQL+ KIS LL + +D  D ML      + S E +K  L+Q+ LKE L  WL+QK A
Sbjct: 594 SDLSQLSEKISLLLFENDDQLDQMLM----NEISQENMKNNLLQEFLKESLHSWLLQKIA 649

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           EGGKGP VLD  GQGVLHFAA+LGY+WALEPT +AGV+++FRDVNGWTALHWAA+ GRER
Sbjct: 650 EGGKGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRER 709

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820
            + SLIALGAAPG L+DP P +PSG TP+DLA + GHKGIAGYL+E  L + +S +SLN 
Sbjct: 710 IIGSLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND 769

Query: 821 KDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSR 880
           K+ +  E+  + +  +                   + DSL AVRNATQAAARIHQVFR++
Sbjct: 770 KNAETVEMAPSPSSSS-------------------LTDSLTAVRNATQAAARIHQVFRAQ 810

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110741068|dbj|BAE98628.1| Calmodulin-binding transcription activator 3 [Arabidopsis thaliana]

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/900 (49%), Positives = 575/900 (63%), Gaps = 110/900 (12%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++RRF+  ++LD+ QIL EA+HRWLRP EICEIL+NY +F+I+ E P TP SGS+F+F
Sbjct: 1   MAEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHG++NENFQRRSYW+L
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121 EEELSHIVLVHYREVKGNR--TNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPN 178
           +EELSHIV VHY EVKG+R  T+FNR +  E A    QE  + +  SE +G  S  F+ N
Sbjct: 121 QEELSHIVFVHYLEVKGSRVSTSFNRMQRTEDAARSPQETGDAL-TSEHDGYASCSFNQN 179

Query: 179 SYQMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYY 237
            +   SQT D+ S+N   + E EDAES YN   SS  +S  +LQQP       G  DPYY
Sbjct: 180 DHSNHSQTTDSASVNGFHSPELEDAESAYNQHGSSTAYSHQELQQPATGGNLTGF-DPYY 238

Query: 238 PSSLT--NNYQGKFSVVPGADFISPAQTDKSRNSNDTGLT--YEPQKNLDFPSWEDVLQN 293
             SLT  ++YQ +   +P  D  S    DKS+  N  G+T   + +K++D  +WE++L N
Sbjct: 239 QISLTPRDSYQKELRTIPVTD--SSIMVDKSKTINSPGVTNGLKNRKSIDSQTWEEILGN 296

Query: 294 CSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSN- 352
           C  GV    EAL   PN  +++L +   +SF   ++F S  ++  + Q    +S   S+ 
Sbjct: 297 CGSGV----EALPLQPNSEHEVLDQILESSF-TMQDFASLQESMVKSQNQELNSGLTSDR 351

Query: 353 --WPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHL 410
             W   Q + L++  +L S                             +E+ P       
Sbjct: 352 TVWFQGQDMELNAISNLAS-----------------------------NEKAP------- 375

Query: 411 LKSDPESSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV------KE 462
                           Y S +K+HL+ G+   EGLKK+DSFNRWMSKELGDV       E
Sbjct: 376 ----------------YLSTMKEHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANE 419

Query: 463 SNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSS 522
           S  QSSS  YWE VESE+G   +G + +  +D Y+MSPSLS++QL+SI DFSP+WAYV  
Sbjct: 420 SFTQSSSRTYWEEVESEDG--SNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGC 477

Query: 523 EVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCS 582
           EV V +TG+FL +++E E  +WSCMFG+ EVPA++++ G+L+C     + GRVPFYVTCS
Sbjct: 478 EVVVFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCS 537

Query: 583 NRLSCSEVREFEYRA--SHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNL 640
           NRL+CSEVREFEY+   S + D +  D     T + L  +F KLLC  S +T      N 
Sbjct: 538 NRLACSEVREFEYKVAESQVFDREADDES---TIDILEARFVKLLCSKSENTSPV-SGND 593

Query: 641 SDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA 700
           SD+SQL+ KIS LL + +D  D ML      + S E +K  L+Q+ LKE L  WL+QK A
Sbjct: 594 SDLSQLSEKISLLLFENDDQLDQMLM----NEISQENMKNNLLQEFLKESLHSWLLQKIA 649

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           EGGKGP VLD  GQGVLHFAA+LGY+WALEPT +AGV+++FRDVNGWTALHWAA+ GRER
Sbjct: 650 EGGKGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRER 709

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820
            + SLIALGAAPG L+DP P +PSG TP+DLA + GHKGIAGYL+E  L + +S +SLN 
Sbjct: 710 IIGSLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND 769

Query: 821 KDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSR 880
           K+ +  E+  + +  +                   + DSL AVRNATQAAARIHQVFR++
Sbjct: 770 KNAETVEMAPSPSSSS-------------------LTDSLTAVRNATQAAARIHQVFRAQ 810

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821451|ref|XP_002878608.1| hypothetical protein ARALYDRAFT_481093 [Arabidopsis lyrata subsp. lyrata] gi|297324447|gb|EFH54867.1| hypothetical protein ARALYDRAFT_481093 [Arabidopsis lyrata subsp. lyrata]

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/897 (49%), Positives = 569/897 (63%), Gaps = 103/897 (11%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA++RRF+  N+LD+ QIL EA+HRWLRP EICEIL+NY +F+I+ E P TP SGS+F+F
Sbjct: 1   MAEARRFSPDNELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHG++NENFQRRSYW+L
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121 EEELSHIVLVHYREVKGNR--TNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPN 178
           +EELSHIV VHY EVKG+R  T++NR +  E      QE  E +  SE +G  S  ++ N
Sbjct: 121 QEELSHIVFVHYLEVKGSRVSTSYNRMQRTEDTARSPQETGEAL-TSEHDGYASCSYNQN 179

Query: 179 SYQMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYY 237
            +   SQT D+ S+N   + E EDAES YN   SS  HS  + QQP       G  DPY+
Sbjct: 180 DHSNHSQTTDSASVNGFHSPELEDAESAYNQHGSSIVHSHQEFQQPAIGGSLTGF-DPYH 238

Query: 238 PSSLT--NNYQGKFSVVPGADFISPAQTDKSRNSNDTGLT--YEPQKNLDFPSWEDVLQN 293
             SLT  ++YQ +   +P  D  S    DK +  N  G+T   + +K++D  +WE++L N
Sbjct: 239 QISLTPRDSYQKELRTIPVTD--SSIMVDKCKTINSPGVTNGLKNRKSIDSQTWEEILGN 296

Query: 294 CSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNW 353
           C  GV    EAL   PN  +++L +   +     ++F S    +G    S+N        
Sbjct: 297 CGSGV----EALPLQPNSEHEVLDQILESYSFTMQDFAS---LQGSMVKSQNQE------ 343

Query: 354 PMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKS 413
                  L+S   LTS S       D  L+++                            
Sbjct: 344 -------LNSG--LTSDSTVWFQGQDVELNAI---------------------------- 366

Query: 414 DPESSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV------KESNM 465
              S+L  + K+ Y S +KQHL+DG+   EGLKK+DSFNRWMSKELGDV       ES  
Sbjct: 367 ---SNLASNEKAPYLSTMKQHLLDGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFT 423

Query: 466 QSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVK 525
           QSSS  YWE VESE+G   +G + +  LD Y+MSPSLS++QL+SI DFSP+WAYV  EV 
Sbjct: 424 QSSSRTYWEEVESEDG--SNGHNSRRELDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVV 481

Query: 526 VLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRL 585
           V +TG+FL +++E E  +WSCMFG+ EVPA++++ G+L+C     + GRVPFYVTCSNRL
Sbjct: 482 VFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRL 541

Query: 586 SCSEVREFEYRA--SHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDI 643
           +CSEVREFEY+   S + D +  D     T   L  +F KLLC  S S+      N S +
Sbjct: 542 ACSEVREFEYKVAESQVFDRETDDES---TINILEARFVKLLCSKSESSSPV-SGNDSHL 597

Query: 644 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG 703
           SQL+ KIS LL + +D  D ML      + S E +K  L+Q+ LKE L  WL+QK AEGG
Sbjct: 598 SQLSEKISLLLFENDDQLDQMLM----NEISQENMKNNLLQEFLKESLHSWLLQKIAEGG 653

Query: 704 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763
           KGP VLD  GQGVLHFAA+LGY+WALEPT +AGV+++FRDVNGWTALHWAA+ GRER + 
Sbjct: 654 KGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIG 713

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 823
           SLIALGAAPG L+DP P +PSG TP+DLA + GHKGIAGYL+E  L + +S +SLN  + 
Sbjct: 714 SLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLNDNNA 773

Query: 824 DVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRSR 880
           +  E   + +  +                   + DSL AVRNATQAAARIHQVFR++
Sbjct: 774 ETVETAPSPSSSS-------------------LTDSLTAVRNATQAAARIHQVFRAQ 811

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557555|ref|XP_003547081.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/903 (47%), Positives = 538/903 (59%), Gaps = 59/903 (6%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           MA+   + L   LDI+Q+  EAQHRWLRPAEICEILRNY  F I  E  + PPSGSLFLF
Sbjct: 1   MAEGASYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHE+LK GSVDVLHCYYAHGEENENFQRRSYWML
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           E ++ HIV VHY EVKGN+               + E +E   +S+   S SS    +  
Sbjct: 121 EPDMMHIVFVHYLEVKGNKN-----------IVVNNEGDEVPTDSQKVTSPSSSLPTHHS 169

Query: 181 QMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQQ----PVAEKIDAGLADP 235
            + S + D+ S  ++  S +EDA+S   + ASS  H   + Q     P+ EKI AG    
Sbjct: 170 CVSSLSTDSVSPTTSLMSLHEDADSEDIHHASSGLHPLHESQHSGNSPLTEKIGAGSNSS 229

Query: 236 YYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCS 295
           Y     + + +   S + G D+I     DK R  NDT  T + QK      W  VLQ+ +
Sbjct: 230 YLMHPFSGDNEQ--SSISGTDYIPVVHGDKFRG-NDTAYT-DGQKPHGMAPWGTVLQSTA 285

Query: 296 Q-----GVGS----QPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRND 346
           +      + S     P ++GD+  Q + I G+   +  G  +E  S    +  WQ    D
Sbjct: 286 KLHNDPSLASFPSILPSSMGDVLEQEHTIFGDLLMSKSGLTEEAESSQSLQSNWQIPFED 345

Query: 347 SSHLSNWPM---DQKVYLDSAHDLTSQ--SCEQGAAHDGLLDSLRPPHAHPN---MENDV 398
           +S     PM    Q   L    D  +     E   A   +   L   H  P    M+ + 
Sbjct: 346 NS--GGMPMLTQTQSFGLQFRSDYGTGLLGNETRNASSEIAPILYSFHGEPKEQPMQQNY 403

Query: 399 HEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELG 458
            ++L + +  H LKS+  + +  +    Y   +K  L+D   E LKK+DSF+RW++KELG
Sbjct: 404 PQELEDGQSQHALKSNSANKVPDEETINYGLTVKSTLLD-RDESLKKVDSFSRWITKELG 462

Query: 459 DVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWA 518
           +V + NMQSS G  W T E ++ +DD+            +SPSLSQDQL+SI DFSP WA
Sbjct: 463 EVADLNMQSSPGISWSTDECQHVIDDTS-----------LSPSLSQDQLFSINDFSPKWA 511

Query: 519 YVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFY 578
           Y  SE++VLI G FL SQ E   C WSCMFGE+EVPAE++A G+L C     KVGRVPFY
Sbjct: 512 YAESEIEVLIIGSFLKSQPEVTTCNWSCMFGEVEVPAEVLADGILCCQAPCHKVGRVPFY 571

Query: 579 VTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPS 638
           VTCSNRL+CSEVREF++R     +VD AD     T     ++    L L  V     DPS
Sbjct: 572 VTCSNRLACSEVREFDFREGFARNVDFADFYISSTEMLRHLRLEDFLSLKPV-----DPS 626

Query: 639 NLS---DISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 695
           N S   D+ + N     +   E +D+ +  ++T E   S   VKE L  +  KEKL  WL
Sbjct: 627 NHSFEGDMEKRNLIFKLISLREEEDYSIKDEVTRELDISQHMVKEHLFHRQFKEKLYSWL 686

Query: 696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755
           + K  E GKGP VLD  GQGVLH AA LGYDWA+ P   AGVNINFRDVNGWTALHWAA 
Sbjct: 687 LHKVTENGKGPNVLDEDGQGVLHLAAFLGYDWAINPIISAGVNINFRDVNGWTALHWAAS 746

Query: 756 CGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA 815
           CGRERTVA L+++GA  GAL+DP+P +PSGRT ADLASS GHKGI+G+LAES L+  L  
Sbjct: 747 CGRERTVAVLVSMGADCGALTDPSPAFPSGRTAADLASSYGHKGISGFLAESSLTHHLET 806

Query: 816 ISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQ 875
           ++++ + G   E++G   VQTV +R  TPV   D+P  + +KDSL AVRNATQAA RIHQ
Sbjct: 807 LTMDDQKGGQQEISGMKVVQTVSERSATPVHYCDIPDAICLKDSLTAVRNATQAADRIHQ 866

Query: 876 VFR 878
           V+R
Sbjct: 867 VYR 869

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528046|ref|XP_003532616.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/898 (46%), Positives = 552/898 (61%), Gaps = 57/898 (6%)

Query: 1   MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLF 60
           M++   F LG +LD++Q+ +EAQHRWLRPAEICEILRNY  F+I  E P+ PPSGSLFLF
Sbjct: 1   MSERSSFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLF 60

Query: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWML 120
           DRKVLRYFRKDGHNWRKKKDGKTVKEAHE+LK GSVDVLHCYYAHGEENENFQRRSYWML
Sbjct: 61  DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121 EEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSY 180
           E ++ HIV VHY +VK N+TN        G   YS   +E   +S+   S SSGF  N  
Sbjct: 121 ELDMMHIVFVHYLDVKVNKTNI-------GGKTYS---DEVTSDSQKSSSLSSGFPRNYG 170

Query: 181 QMPSQTADT-SLNSAQASEYEDAESVYNNQASSRFHSFLDLQ-----QPVAEKIDAGLAD 234
            MPS + D+ S  S   S  EDA+S   +QASS  HS+ + Q     +P+ +KI A    
Sbjct: 171 SMPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSYRESQNLGNDRPM-DKIHARSNS 229

Query: 235 PYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNC 294
            Y     ++N+ G+  V  GA++I   Q +KSR S+ T +  E Q+     SW++ ++  
Sbjct: 230 SYLMHPFSDNH-GQLPV-SGAEYIPHVQGNKSRASDTTYI--EGQRAHGIASWDNAMEQ- 284

Query: 295 SQGVGSQPE----------ALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASR 344
           S G  + P           A+G+I ++ + + G    +     +        +  WQ   
Sbjct: 285 SAGKHADPSLVSSTSIPSSAMGNILDKNHTVPGNLLGHKIALTEVERGAQPVQSNWQIPF 344

Query: 345 NDSS-HLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNM---ENDVHE 400
            D++  L NW   Q + L+   D        G +  G + +   P   P +     ++ E
Sbjct: 345 EDNTGELPNWGFTQSLGLEFGSDY-------GTSLLGDVTNNAGPEIDPELFTFNGELKE 397

Query: 401 QLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDV 460
           Q  + +    LKS+    +  +    Y+  +++ L+DG  E LKK+DSF+RWM+KEL  V
Sbjct: 398 QYTHGQSQPALKSNSAYEVPGEASINYALTMRRGLLDGE-ESLKKVDSFSRWMTKELAGV 456

Query: 461 KESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYV 520
            + +MQSS G  W T E  + +DD+            +  SLSQDQL+SI DFSP WAY 
Sbjct: 457 DDLHMQSSPGISWSTDECGDVIDDTS-----------LHLSLSQDQLFSINDFSPKWAYA 505

Query: 521 SSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVT 580
            SE++VLI G FL SQ     C WSCMFGE+EVPAE++A G+L C     K+GRVPFYVT
Sbjct: 506 ESEIEVLIVGTFLKSQPVVAKCNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVT 565

Query: 581 CSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNL 640
           CSNR +CSEVREFEYR     +++  D   + +   L ++   LL L S+ T N      
Sbjct: 566 CSNRFACSEVREFEYREGFDRNINFPDFFNNSSEMELHLRLVGLLSLNSMHTLNQVFEGD 625

Query: 641 SDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA 700
            D   L  K+ SL ++E        + TAE   S +++KE +  K +KEKL  WL+ K  
Sbjct: 626 MDKRNLIFKLISLKEEEEYS--SKEETTAEMDISQQKLKEHMFHKQVKEKLYSWLLHKVT 683

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E GKGP VLD  GQGVLH  AALGYDWA+ P   AGVNINFRDVNGWTALHWAA+CGRER
Sbjct: 684 ETGKGPLVLDEEGQGVLHLIAALGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRER 743

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820
           TVA L+++ AA GAL+DP P++P GRTPADLASS GHKGI+G+LAES L+S L ++++++
Sbjct: 744 TVAVLVSMDAAAGALTDPCPEFPLGRTPADLASSKGHKGISGFLAESLLTSHLESLTMDE 803

Query: 821 KDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR 878
                 E +G   VQTV +R  TPV +GD+P  + +KDSL AVRNATQAA RI+QVFR
Sbjct: 804 NKDGRKETSGMKVVQTVSERTATPVLNGDIPDDICLKDSLNAVRNATQAADRIYQVFR 861

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	911
TAIR|locus:2060405	1032	SR1 "signal responsive 1" [Ara	0.442	0.390	0.515	5.6e-199
TAIR|locus:2173368	1050	AT5G64220 [Arabidopsis thalian	0.502	0.436	0.433	1.4e-157
TAIR|locus:2019534	1016	AT1G67310 [Arabidopsis thalian	0.407	0.365	0.317	1.3e-85
TAIR|locus:2130125	923	AT4G16150 [Arabidopsis thalian	0.192	0.189	0.475	1.4e-72
FB|FBgn0259234	2044	Camta "Calmodulin-binding tran	0.218	0.097	0.327	2e-29
UNIPROTKB|Q9Y6Y1	1673	CAMTA1 "Calmodulin-binding tra	0.125	0.068	0.420	4.8e-28
MGI|MGI:2140230	1682	Camta1 "calmodulin binding tra	0.125	0.067	0.420	7.9e-28
UNIPROTKB|F1P8J0	1204	CAMTA2 "Uncharacterized protei	0.118	0.089	0.407	1.4e-25
UNIPROTKB|J9NZ90	1214	CAMTA2 "Uncharacterized protei	0.118	0.088	0.407	1.4e-25
UNIPROTKB|O94983	1202	CAMTA2 "Calmodulin-binding tra	0.118	0.089	0.407	4.4e-25

TAIR|locus:2060405 SR1 "signal responsive 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1031 (368.0 bits), Expect = 5.6e-199, Sum P(3) = 5.6e-199
 Identities = 217/421 (51%), Positives = 275/421 (65%)

Query:   417 SSLTIDGKSFYSSAIKQHLIDGST--EGLKKLDSFNRWMSKELGDV------KESNMQSS 468
             S+L  + K+ Y S +KQHL+ G+   EGLKK+DSFNRWMSKELGDV       ES  QSS
Sbjct:   366 SNLASNEKAPYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFTQSS 425

Query:   469 SGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLI 528
             S  YWE VESE+G   +G + +  +D Y+MSPSLS++QL+SI DFSP+WAYV  EV V +
Sbjct:   426 SRTYWEEVESEDG--SNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVVVFV 483

Query:   529 TGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCS 588
             TG+FL +++E E  +WSCMFG+ EVPA++++ G+L+C     + GRVPFYVTCSNRL+CS
Sbjct:   484 TGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRLACS 543

Query:   589 EVREFEYRASHIPDVD-VADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLN 647
             EVREFEY+ +     D  AD+  + T + L  +F KLLC  S +T      N SD+SQL+
Sbjct:   544 EVREFEYKVAESQVFDREADD--ESTIDILEARFVKLLCSKSENTSPVS-GNDSDLSQLS 600

Query:   648 SKISSLLKDENDDWDLMLKLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGGKGPC 707
              KIS LL + +D  D ML                                  AEGGKGP 
Sbjct:   601 EKISLLLFENDDQLDQMLM----NEISQENMKNNLLQEFLKESLHSWLLQKIAEGGKGPS 656

Query:   708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA 767
             VLD  GQGVLHFAA+LGY+WALEPT +AGV+++FRDVNGWTALHWAA+ GRER + SLIA
Sbjct:   657 VLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIGSLIA 716

Query:   768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYXXXXXXXXXXXXXXXNKKDGDVAE 827
             LGAAPG L+DP P +PSG TP+DLA + GHKGIAGY               N K+ +  E
Sbjct:   717 LGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLNDKNAETVE 776

Query:   828 V 828
             +
Sbjct:   777 M 777

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IGI;IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IGI

TAIR|locus:2173368 AT5G64220 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
 Identities = 207/477 (43%), Positives = 279/477 (58%)

Query:   404 NAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKES 463
             N E  ++ K  PE  L  +  +  +  +++ L+    + LKK+DSF+RW+SKELG++++ 
Sbjct:   368 NNEAAYIPKLGPED-LIYEASANQTLPLRKALLK-KEDSLKKVDSFSRWVSKELGEMEDL 425

Query:   464 NMQSSSGAY-WETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSS 522
              MQSSSG   W +VE EN    +G S         +SPSLS+DQ +++IDF P W    S
Sbjct:   426 QMQSSSGGIAWTSVECENAA--AGSS---------LSPSLSEDQRFTMIDFWPKWTQTDS 474

Query:   523 EVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCS 582
             EV+V++ G FL+S QE  +  WSCMFGE+EVPA+I+  GVL CH    +VGRVPFY+TCS
Sbjct:   475 EVEVMVIGTFLLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCS 534

Query:   583 NRLSCSEVREFEYRASHIPDVDVADNCGDITSE-NLRMQFGKLLCLTSVSTPNYDPSNLS 641
             +R SCSEVREF++       ++  D  G  T E +L ++F  LL L      ++   N+ 
Sbjct:   535 DRFSCSEVREFDFLPGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVG 594

Query:   642 DISQLNSKISSLLKDENDDWDLMLKLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAE 701
             +  +  SKI  LLKDE +     L  T                                E
Sbjct:   595 EKRRKISKIM-LLKDEKEP---PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTE 650

Query:   702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 761
              GKGP +LD  GQGVLH AAALGYDWA++P   AGV+INFRD NGW+ALHWAA+ GRE T
Sbjct:   651 EGKGPNILDEDGQGVLHLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDT 710

Query:   762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYXXXXXXXXXXXXXXXNKK 821
             VA L++LGA  GAL+DP+P++P G+T ADLA   GH+GI+G+               + K
Sbjct:   711 VAVLVSLGADAGALADPSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTVDAK 770

Query:   822 DGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLXXXXXXXXXXXRIHQVFR 878
             +   A+ +GA AV TV +R  TP+S GD+P  LSMKDSL           R+HQVFR
Sbjct:   771 ENSSADSSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFR 827

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2019534 AT1G67310 [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 1.3e-85, Sum P(2) = 1.3e-85
 Identities = 124/390 (31%), Positives = 189/390 (48%)

Query:   503 SQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGV 562
             + +Q ++I D SP+W Y +   KV+I G FL    E+    WSCMFG  +VP EI+  GV
Sbjct:   441 AHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTEST---WSCMFGNAQVPFEIIKEGV 497

Query:   563 LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFG 622
             +RC       G+V   +T  + L CSE+REFEYR    PD      C +  + ++     
Sbjct:   498 IRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREK--PDT-CCPKCSEPQTSDMSTSPN 554

Query:   623 KLLCLTS-VSTPNYDPSN--LSDISQLNSKISSLLKDENDDWDLMLKLTAXXXXXXXXXX 679
             +L+ L   V T   D S+   S++   N K+ + LK ++D W  ++              
Sbjct:   555 ELILLVRFVQTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGSASSTSTV 614

Query:   680 XXXXXXXXXXXXXXXXXXXAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739
                                + +     C L    QG++H  A LG++WA  P    GVN+
Sbjct:   615 DWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAHGVNV 674

Query:   740 NFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKG 799
             +FRD+ GW+ALHWAA  G E+ VA+LIA GA+ GA++DP+ + P+G+T A +A+S GHKG
Sbjct:   675 DFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASNGHKG 734

Query:   800 IAGYXXXXXXXXXXXXXXXNKKDG--DVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMK 857
             +AGY                + +   D A+V     + ++ ++ P+   D      +S+K
Sbjct:   735 LAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQSPSGNEDQ-----VSLK 789

Query:   858 DSLXXXXXXXXXXXRIHQVFRS---RPRSQ 884
             D+L           RI   FR+   R R Q
Sbjct:   790 DTLAAVRNAAQAAARIQAAFRAHSFRKRKQ 819

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2130125 AT4G16150 [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
 Identities = 86/181 (47%), Positives = 109/181 (60%)

Query:    13 LDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDG 72
             LDI+ +L EA  RWLRP EI  +L N+  F I  +  + P SG++ LFDRK+LR FRKDG
Sbjct:    23 LDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDG 82

Query:    73 HNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHY 132
             HNW+KKKDGKT+KEAHE LK G+ + +H YYAHGE+   F RR YW+L++   HIVLVHY
Sbjct:    83 HNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPTFVRRCYWLLDKSQEHIVLVHY 142

Query:   133 REVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLN 192
             RE     T+   A  A     YS    + +    V    SSG H N+     +    SL 
Sbjct:   143 RE-----THEVHAAPATPGNSYSSSITDHLSPKIVAEDTSSGVH-NTCNTGFEVRSNSLG 196

Query:   193 S 193
             S
Sbjct:   197 S 197

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

FB|FBgn0259234 Camta "Calmodulin-binding transcription activator" [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
 Identities = 70/214 (32%), Positives = 98/214 (45%)

Query:    23 QHRWLRPAEICEILRNYTKFRI--APESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
             +HRW    EI  IL ++ K     + E    P SGSL L+ RK +RY R+DG+ W+K+KD
Sbjct:   426 RHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRY-RRDGYCWKKRKD 484

Query:    81 GKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRT 140
             GKT +E H +LK    + ++  Y H      F RR YW+L+     IVLVHY  V     
Sbjct:   485 GKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNP--DIVLVHYLNVPYPDD 542

Query:   141 NFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYE 200
             N   A +A   T +  + E T    E   SQ     P    + S     S N  + S  E
Sbjct:   543 N-KMAVIAPSITLWGDKKEWT---KEELVSQ---LKPMLSTINSDDDSDSGNDIEISTAE 595

Query:   201 DAESVYNNQASSRFHSFLDLQQPVAEKIDAGLAD 234
               ES+       +    L  Q  + +++D G  D
Sbjct:   596 TVESIVCQLMEKQR---LSRQAALVKQLDCGCGD 626

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0016059 "deactivation of rhodopsin mediated signaling" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0009416 "response to light stimulus" evidence=IMP

UNIPROTKB|Q9Y6Y1 CAMTA1 "Calmodulin-binding transcription activator 1" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
 Identities = 50/119 (42%), Positives = 68/119 (57%)

Query:    19 LIEAQHRWLRPAEICEILRNYTKFRI-APESPHT-PPSGSLFLFDRKVLRYFRKDGHNWR 76
             L + +HRW    EI   L  + K       SP T P +GS+ L++RK ++Y RKDG+ W+
Sbjct:    67 LPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWK 125

Query:    77 KKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
             K+KDGKT +E H +LK   V+ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct:   126 KRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:2140230 Camta1 "calmodulin binding transcription activator 1" [Mus musculus (taxid:10090)]

 Score = 223 (83.6 bits), Expect = 7.9e-28, Sum P(3) = 7.9e-28
 Identities = 50/119 (42%), Positives = 68/119 (57%)

Query:    19 LIEAQHRWLRPAEICEILRNYTKFRI-APESPHT-PPSGSLFLFDRKVLRYFRKDGHNWR 76
             L + +HRW    EI   L  + K       SP T P +GS+ L++RK ++Y RKDG+ W+
Sbjct:    67 LPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWK 125

Query:    77 KKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
             K+KDGKT +E H +LK   V+ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct:   126 KRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P8J0 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
 Identities = 46/113 (40%), Positives = 64/113 (56%)

Query:    25 RWLRPAEICEILRNYTKF-RIAPESPHT-PPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  + K       +P T P +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
             T +E H +LK   ++ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|J9NZ90 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
 Identities = 46/113 (40%), Positives = 64/113 (56%)

Query:    25 RWLRPAEICEILRNYTKF-RIAPESPHT-PPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  + K       +P T P +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    63 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 121

Query:    83 TVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
             T +E H +LK   ++ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct:   122 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 172

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O94983 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
 Identities = 46/113 (40%), Positives = 64/113 (56%)

Query:    25 RWLRPAEICEILRNYTKF-RIAPESPHT-PPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  + K       +P T P +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV 135
             T +E H +LK   ++ L+  Y H      F RR YW+L+     IVLVHY  V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IGI

GO:0014898 "cardiac muscle hypertrophy in response to stress" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.VII.1798.1 hypothetical protein (994 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	911
pfam03859	119	pfam03859, CG-1, CG-1 domain	4e-70
smart01076	118	smart01076, CG-1, CG-1 domains are highly conserve	5e-60
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-11
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-08
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-07
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-05
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	7e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-04
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	0.003

>gnl|CDD|217766 pfam03859, CG-1, CG-1 domain

 Score =  227 bits (580), Expect = 4e-70
 Identities = 80/119 (67%), Positives = 97/119 (81%)

Query: 18  ILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRK 77
           +L EA+ RWLRP EI  IL+N+ K  I  E P  PPSGSLFL++RKV+RYFRKDG+NW+K
Sbjct: 1   LLPEAKSRWLRPEEIYAILQNFEKHFITLEPPTRPPSGSLFLYNRKVVRYFRKDGYNWKK 60

Query: 78  KKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136
           KKDGKT +EAHE+LK G V+VL+CYYAHGE+N  FQRR YW+L+E+L HIVLVHY  VK
Sbjct: 61  KKDGKTTREAHEKLKVGGVEVLNCYYAHGEDNPTFQRRCYWLLDEDLEHIVLVHYLNVK 119

CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 119

>gnl|CDD|198144 smart01076, CG-1, CG-1 domains are highly conserved domains of about 130 amino-acid residues

 Score =  199 bits (508), Expect = 5e-60
 Identities = 69/118 (58%), Positives = 82/118 (69%), Gaps = 4/118 (3%)

Query: 21  EAQHRWLRPAEICEILRNYTKF--RIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKK 78
           EA+HRWL P EI  IL N+ K    +    P  P SGSLFLF+RK L+YFRKDG+NW+KK
Sbjct: 3   EAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYFRKDGYNWKKK 62

Query: 79  KDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136
           KDGKTV+E HE+LK G ++ LHCYYAH E N  F RR YW+L  +   IVLVHY  V 
Sbjct: 63  KDGKTVREDHEKLKVGGIECLHCYYAHSEINPTFHRRCYWLL--QNPDIVLVHYLNVP 118

The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 118

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 14/108 (12%)

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYC 756
           E G      D+ G+  LH AA  G+       LE     G ++N RD +G T LH AA  
Sbjct: 28  ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE----KGADVNARDKDGNTPLHLAARN 83

Query: 757 GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           G    V  L+  GA   A          GRTP  LA+  GH  +   L
Sbjct: 84  GNLDVVKLLLKHGADVNARDK------DGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 710 DHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765
           D  G+  LH AA+ G+       LE     G ++N +D +G T LH AA  G    V  L
Sbjct: 4   DEDGRTPLHLAASNGHLEVVKLLLE----NGADVNAKDNDGRTPLHLAAKNGHLEIVKLL 59

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           +  GA      D   +   G TP  LA+  G+  +   L
Sbjct: 60  LEKGA------DVNARDKDGNTPLHLAARNGNLDVVKLL 92

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%)

Query: 717 LHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH AA  G        LE     G ++N +D +G TALH AA  G    V  L+  GA
Sbjct: 32  LHLAARNGNLEIVKLLLE----HGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 55.8 bits (135), Expect = 6e-08
 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWA--LEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           G  P   D  G   LH  A         + P  +AG++IN R+  G T LH+AA     R
Sbjct: 212 GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPR 271

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
               LIALGA   A+S        G TP  L 
Sbjct: 272 ACRRLIALGADINAVS------SDGNTPLSLM 297

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 740 NFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKG 799
           N RD +G T LH AA  G    V  L+  GA      D   K   GRTP  LA+  GH  
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGA------DVNAKDNDGRTPLHLAAKNGHLE 54

Query: 800 IAGYL 804
           I   L
Sbjct: 55  IVKLL 59

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 717 LHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
           LH AA  G        LE     G ++N    +  TALH AA  G    V  L+  GA  
Sbjct: 1   LHLAAKNGNLELVKLLLE----KGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGA-- 52

Query: 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
               D   K   G T   LA+  G+  I   L E
Sbjct: 53  ----DVNAKDKDGNTALHLAARNGNLEIVKLLLE 82

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 47.9 bits (113), Expect = 8e-06
 Identities = 33/120 (27%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA--------GVNINFRDVNGWTALHWAA 754
           G      D  G   LH AA  G                       N RD +G T LHWAA
Sbjct: 96  GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAA 155

Query: 755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS 814
             G    V  L+  GA      DP  +   G T  D A+  G   +   L +  L  +L 
Sbjct: 156 LNGDADIVELLLEAGA------DPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLL 209

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           G TALH AA  GR   V  L+  G       +       G T   +A+  G+  +   L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE------DGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 716 VLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLI 766
            LH AA  G      + LE     GV+IN  D +G TALH AA  G    +  L+
Sbjct: 4   ALHKAAISGRLELVKYLLE----KGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 12/77 (15%)

Query: 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTA 749
            L++K A+        D  G   LH AA  G        L+     G ++N RD +G T 
Sbjct: 58  LLLEKGAD----VNARDKDGNTPLHLAARNGNLDVVKLLLK----HGADVNARDKDGRTP 109

Query: 750 LHWAAYCGRERTVASLI 766
           LH AA  G    V  L+
Sbjct: 110 LHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 44.8 bits (105), Expect = 7e-05
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE-----RTVAS 764
           D  G+  LH AA+ G D  ++    +G ++N +D +G T LH AA  G            
Sbjct: 70  DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKL 129

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 807
           L+  GA    L     +   G TP   A+  G   I   L E+
Sbjct: 130 LLEAGA---DLDVNNLRDEDGNTPLHWAALNGDADIVELLLEA 169

Length = 235

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSD 777
           +G T LH AA  G    V  L+  GA   A   
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 40.8 bits (96), Expect = 0.003
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 12/60 (20%)

Query: 735 AGVNINFRDVNGWTALHWAAYCG----RERTVASLIALGAAPGALSDPTPKYPSGRTPAD 790
           AG ++N +D  G T LH   Y        + +  L+  GA   AL         G TP  
Sbjct: 106 AGADVNAKDKVGRTPLH--VYLSGFNINPKVIRLLLRKGADVNALDL------YGMTPLA 157

Length = 471

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	911
KOG0520	975	consensus Uncharacterized conserved protein, conta	100.0
PF03859	118	CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domain	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	99.98
PHA03100	480	ankyrin repeat protein; Provisional	99.98
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.97
PHA02791	284	ankyrin-like protein; Provisional	99.97
PHA02878	477	ankyrin repeat protein; Provisional	99.97
PHA02875	413	ankyrin repeat protein; Provisional	99.97
PHA02876	682	ankyrin repeat protein; Provisional	99.97
PHA02946	446	ankyin-like protein; Provisional	99.97
PHA02874	434	ankyrin repeat protein; Provisional	99.97
PHA03095	471	ankyrin-like protein; Provisional	99.97
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.97
PHA02876	682	ankyrin repeat protein; Provisional	99.97
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.97
PHA02989	494	ankyrin repeat protein; Provisional	99.96
PHA02730	672	ankyrin-like protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.96
PHA02791	284	ankyrin-like protein; Provisional	99.96
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.96
KOG0510	929	consensus Ankyrin repeat protein [General function	99.95
PHA02874	434	ankyrin repeat protein; Provisional	99.95
PHA02798	489	ankyrin-like protein; Provisional	99.95
PHA02989	494	ankyrin repeat protein; Provisional	99.95
KOG0510	929	consensus Ankyrin repeat protein [General function	99.95
PHA02798	489	ankyrin-like protein; Provisional	99.95
PHA02875	413	ankyrin repeat protein; Provisional	99.95
PHA02878	477	ankyrin repeat protein; Provisional	99.94
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.94
PHA02917	661	ankyrin-like protein; Provisional	99.93
PHA02917	661	ankyrin-like protein; Provisional	99.93
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.93
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.93
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.93
PHA02792	631	ankyrin-like protein; Provisional	99.92
PHA02859	209	ankyrin repeat protein; Provisional	99.92
KOG0508	615	consensus Ankyrin repeat protein [General function	99.91
PHA02730	672	ankyrin-like protein; Provisional	99.9
PHA02795	437	ankyrin-like protein; Provisional	99.9
KOG0508	615	consensus Ankyrin repeat protein [General function	99.89
PHA02859	209	ankyrin repeat protein; Provisional	99.88
PHA02795	437	ankyrin-like protein; Provisional	99.87
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.87
PHA02792	631	ankyrin-like protein; Provisional	99.86
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.85
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.85
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.84
KOG0514	452	consensus Ankyrin repeat protein [General function	99.81
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.79
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.79
PHA02743	166	Viral ankyrin protein; Provisional	99.79
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.76
PHA02741	169	hypothetical protein; Provisional	99.76
PHA02743	166	Viral ankyrin protein; Provisional	99.76
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.75
PHA02741	169	hypothetical protein; Provisional	99.74
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.74
PHA02884	300	ankyrin repeat protein; Provisional	99.74
PHA02736	154	Viral ankyrin protein; Provisional	99.72
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.72
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.71
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.69
KOG0514	452	consensus Ankyrin repeat protein [General function	99.69
PHA02736	154	Viral ankyrin protein; Provisional	99.69
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.68
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.67
PHA02884	300	ankyrin repeat protein; Provisional	99.66
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.65
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.57
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.54
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.53
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.51
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.51
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.49
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.48
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.43
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.41
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.4
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.39
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.38
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.33
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.32
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.31
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.31
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.3
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.28
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.26
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.17
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.08
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.8
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.76
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.63
PF13606	30	Ank_3: Ankyrin repeat	98.61
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.47
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.47
KOG2384	223	consensus Major histocompatibility complex protein	98.42
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.38
KOG0522	560	consensus Ankyrin repeat protein [General function	98.36
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.32
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.31
PF13606	30	Ank_3: Ankyrin repeat	98.29
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.28
KOG0522	560	consensus Ankyrin repeat protein [General function	98.18
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.17
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.14
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.07
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.02
KOG0511	516	consensus Ankyrin repeat protein [General function	97.98
KOG2384	223	consensus Major histocompatibility complex protein	97.87
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	97.86
KOG0511	516	consensus Ankyrin repeat protein [General function	97.74
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.69
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.31
KOG2505	591	consensus Ankyrin repeat protein [General function	96.67
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.64
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	96.42
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.65
KOG2505	591	consensus Ankyrin repeat protein [General function	95.5
cd01175	85	IPT_COE IPT domain of the COE family (Col/Olf-1/EB	93.69
PF08549	669	SWI-SNF_Ssr4: Fungal domain of unknown function (D	89.2
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	85.13

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=100.00  E-value=9.3e-101  Score=905.69  Aligned_cols=740  Identities=40%  Similarity=0.630  Sum_probs=503.5

Q ss_pred             CCChhhHHHHHHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceecCCCcchHhhh
Q 002539            9 LGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAH   88 (911)
Q Consensus         9 ~~~~~d~~~~~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~fr~dg~~w~k~~~~~~~~e~h   88 (911)
                      ....||+..+++|+++|||+|+||+.||+||++|.++++||+||.|||+||||||+|||||||||+||||||||||||||
T Consensus        19 sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaH   98 (975)
T KOG0520|consen   19 SLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAH   98 (975)
T ss_pred             hhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHH
Confidence            34679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCEeeEEEEeecccCCcccceeeeeccccccccEEEEeeeeccCCccccccccccCCCCCCCCCCccCCCCCCcc
Q 002539           89 ERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVE  168 (911)
Q Consensus        89 ~~lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (911)
                      |||||||+|+||||||||+++|||||||||||++.++||||||||||++.+.. ..+..+..                 .
T Consensus        99 e~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~-~~~~~~~~-----------------~  160 (975)
T KOG0520|consen   99 EKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDA-AKGAGEIF-----------------S  160 (975)
T ss_pred             HhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeeccccccc-ccCccccc-----------------c
Confidence            99999999999999999999999999999999999999999999999987731 11111110                 1


Q ss_pred             CCCCCCCCCCCCCCCCcccc-CCcCcc-cccchhhhhccccCCCCccccccc------cccchhhhhcccCCCCCCCCCC
Q 002539          169 GSQSSGFHPNSYQMPSQTAD-TSLNSA-QASEYEDAESVYNNQASSRFHSFL------DLQQPVAEKIDAGLADPYYPSS  240 (911)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~-~s~~~~-~~~~~e~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  240 (911)
                      +++|+.-  +   ...+-.+ .+|.-. +.+..++++++++.+.+..+-...      .-+++.++..        .+  
T Consensus       161 s~~sd~~--~---S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~~~~g~~~~~s~~h~i~~~~~~s~--------~~--  225 (975)
T KOG0520|consen  161 SIISDKA--W---SLNQLAGQLSPIFHNHSSVNEDVAEINSNQTGNALGSVFGNSRNHRIRLHEVNSL--------DP--  225 (975)
T ss_pred             ccccccc--c---cHHHhhcccCcchhcccchHHHHHHHhhhccccccccccCcchhhhhcccccCCc--------cc--
Confidence            2222221  1   0111111 122111 345566776654332222221110      1111111100        00  


Q ss_pred             cccCcCCcccccCCCCCcCCcCc-cCCCCCCCCCCcCCCCCCCCCCChHHHhhhcCCCCCCCCCccCCCCCCCCCcCCCC
Q 002539          241 LTNNYQGKFSVVPGADFISPAQT-DKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEP  319 (911)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (911)
                          +.......+...... .++ ....-.....     ..+.+...|.++++++....-....++.             
T Consensus       226 ----~~~~p~s~~s~~~~~-~~~~~~~~~~~~~~-----~rs~~~s~~te~l~n~~~~~~~~g~s~s-------------  282 (975)
T KOG0520|consen  226 ----LYKLPVSDDSLNLSA-PKPIDLPKGPTSVK-----QRSSSPSYFTEILGNAPSGLVSQGNSLS-------------  282 (975)
T ss_pred             ----cccccccCCcccccc-CCCcccccCCcchh-----hcCCCCcchhhhcccCCCcccccccccc-------------
Confidence                111111100000000 000 0000000000     0113334677777766622111111100             


Q ss_pred             ccCCccccccccCcccccccccccccCCcCCCCCccccccccccccccccccccccccccCccCCCCCCCCCCCCCCccc
Q 002539          320 FTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVH  399 (911)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (911)
                        +.+  +..        ..|+.        +          +.+.       ....+    ..+|+|....+.   ...
T Consensus       283 --~~l--~~i--------~~~~~--------~----------~~~~-------~~~p~----~~nf~~~ss~~s---~~~  318 (975)
T KOG0520|consen  283 --SSL--QRI--------SSFTG--------L----------DNAA-------YEQPN----SQNFEPNSSLNS---HVT  318 (975)
T ss_pred             --cch--hhc--------ccccc--------c----------cccc-------ccCCc----cccccccccCCC---Ccc
Confidence              000  000        01110        0          0000       00000    000100000000   000


Q ss_pred             ccCCccccccCCCCCCCcccccccccccchhhhccccc--ccccccccccchhhHHhhhcCccccccccCCCCccccccc
Q 002539          400 EQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLID--GSTEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVE  477 (911)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dsf~rw~~~~~~~~~~~~~~~~~~~~~~~~~  477 (911)
                      .    ...+.+  .....+...+..-|     .....+  ...+||++.|||.|||+ .|++..|..-.++-+.+|.+..
T Consensus       319 ~----~~~g~g--~~~~~~sa~~~~~P-----~~~~~~~~~~~~~l~sgdsf~~~~~-t~~e~~d~~q~~s~~~~~~p~~  386 (975)
T KOG0520|consen  319 G----QSYGQG--LQARSPSATSESRP-----ITSAADAALSELGLKSGDSFSRWAS-TFGEISDLGQDPSGEAVWTPEN  386 (975)
T ss_pred             c----cccCcc--ccCCCcccccccCC-----cchhhccccccccccccccccchhh-hhcccccCCCCCccccccccCC
Confidence            0    000000  00001111112223     111122  12789999999999996 8888887773344456787653


Q ss_pred             ccCCCCCCCCCcccccccccCCCccCCCCceEEEeeccccccCCCceEEEEEcc-cccCcccchHHHHHHHcCCcHHHHH
Q 002539          478 SENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGR-FLMSQQEAENCKWSCMFGEIEVPAE  556 (911)
Q Consensus       478 ~~~~~~~~~~~~~~~l~~~~~~~s~s~~q~fsI~dfSP~wa~s~~~tKVlI~G~-fl~~~~~~T~LH~Ac~~G~~eVV~~  556 (911)
                        +.+.+.+         ...++| +++|+|+|+||||+|+|.++++||+|+|. +..     +.-+|.|+||+.+|++.
T Consensus       387 --~~~~~~~---------s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~~~-----~~~~ysc~Fg~~~VPAe  449 (975)
T KOG0520|consen  387 --DPMGPPG---------SFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQDE-----TRSNYSCMFGEQRVPAE  449 (975)
T ss_pred             --CcCCCcc---------cccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcccc-----CCCceEEEeCCccccHH
Confidence              2222221         136666 44999999999999999999999999995 333     35679999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCChHHHHHHH-cCCCcchHHHHHHHHhCCCCccccCCCCChHHHhhHHHHHHHHhcCCCCC-CC
Q 002539          557 IVAGGVLRCHTSSQKVGRVPFYVTCS-NRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVST-PN  634 (911)
Q Consensus       557 LL~~Gadvn~~~~d~~G~TPLhvAa~-nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~~~~~ivkLLl~ga~v~-~~  634 (911)
                      ||+.||.+|++|++..|.++|++||. ++..|+++++|+|+...-..++..+.+-.+--+....++..++.....+. ..
T Consensus       450 liq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~~~~~~s~  529 (975)
T KOG0520|consen  450 LIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRKQSILSSK  529 (975)
T ss_pred             HhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHhHhHhhcc
Confidence            99999999999999999999999999 88899999999999988888888774444444545556655555222221 11


Q ss_pred             CCCCCchhhhH--HHHHHHhhhccCCcchhH-HHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhC-CCCCCccc
Q 002539          635 YDPSNLSDISQ--LNSKISSLLKDENDDWDL-MLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLD  710 (911)
Q Consensus       635 ~~~~~~~~~~~--l~~~I~sl~~~d~~g~t~-L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~-Gad~n~~D  710 (911)
                      ...........  +..++..+    .+.|.. ++.....+.....+.++.+|..++++.++.||++.+++- |......|
T Consensus       530 ~~~~n~~~~~~~~l~skv~~l----~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld  605 (975)
T KOG0520|consen  530 PSTENTSDAESGNLASKVVHL----LNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELD  605 (975)
T ss_pred             CCccccccccchhHHHHHHHH----HHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhc
Confidence            11122222222  66666666    566776 777777777777888999999999999999999999986 88888999


Q ss_pred             CCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHH
Q 002539          711 HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPAD  790 (911)
Q Consensus       711 ~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLh  790 (911)
                      .+|+..+|++|..|+.+++.+++..|..++++|..||||||||+.+|++.+|..|++.|++.++++||++.++.|.|+..
T Consensus       606 ~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~  685 (975)
T KOG0520|consen  606 RDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD  685 (975)
T ss_pred             ccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCcHHHHHHHHHcCCCCccccCcccCC-C-CCcHhhhcHHHHHHhhhcCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 002539          791 LASSIGHKGIAGYLAESDLSSALSAISLNKK-D-GDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQ  868 (911)
Q Consensus       791 lAa~~G~~eIvklLLe~G~~sh~adln~~D~-~-G~Ta~~~~~~~V~~Lle~ga~~~~~~~~~~~lsLkdsLaAvr~Aaq  868 (911)
                      +|..+|+.++..+|.++.++.+..++...+. . +.++..   +..+...+..+.+.     ++..+|+|+|+|||+|++
T Consensus       686 la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~---~~~~t~~e~s~~~~-----~~~~sl~Dtl~avrdAa~  757 (975)
T KOG0520|consen  686 LARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEED---KAEKTSSEGSPNPD-----EDSDSLKDTLAAVRDAAQ  757 (975)
T ss_pred             hhhcccccchHHHHhhhHHHHHHhhccccccccCCCchhh---hhhhccCCCCCCCC-----ccccccccccccccchHH
Confidence            9999999999999999999988888888773 2 233333   33333333333333     444569999999999999


Q ss_pred             HHHHHHHHHh--cchhhhHHHhh
Q 002539          869 AAARIHQVFR--SRPRSQVITMS  889 (911)
Q Consensus       869 AAarIq~afR--Sf~rk~~~~~~  889 (911)
                      ||+|||++||  +|+|+++.+..
T Consensus       758 aa~r~q~vfr~~~~~~~~a~~i~  780 (975)
T KOG0520|consen  758 AAARIQAVFRAQSFQKKQAREIM  780 (975)
T ss_pred             HHHhhhhhhhhhhhhhhhHHHHH
Confidence            9999999999  99999988865

>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []

Probab=100.00  E-value=1.2e-61  Score=448.19  Aligned_cols=117  Identities=67%  Similarity=1.210  Sum_probs=114.5

Q ss_pred             HHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceecCCCcchHhhhhhhccCCEee
Q 002539           19 LIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV   98 (911)
Q Consensus        19 ~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~fr~dg~~w~k~~~~~~~~e~h~~lk~~~~~~   98 (911)
                      ++| ++|||+|+||++||+||++|++..+||+||+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus         2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~   80 (118)
T PF03859_consen    2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV   80 (118)
T ss_pred             chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence            445 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeecccCCcccceeeeeccccccccEEEEeeeecc
Q 002539           99 LHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK  136 (911)
Q Consensus        99 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~  136 (911)
                      ||||||||++||+||||||||||++||||||||||||+
T Consensus        81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~  118 (118)
T PF03859_consen   81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK  118 (118)
T ss_pred             eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence            99999999999999999999999999999999999985

CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.8e-31  Score=307.81  Aligned_cols=255  Identities=16%  Similarity=0.133  Sum_probs=200.0

Q ss_pred             CcccchHHHHHHHcC---CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCC
Q 002539          535 SQQEAENCKWSCMFG---EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD  611 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G---~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~  611 (911)
                      +..+.||||+|+..|   +.+++++|++.|++++  ..+..|+||||+|+.+|.   ...++++|++.|++++.+|..|.
T Consensus        44 ~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin--~~~~~g~TpLh~A~~~~~---~~~iv~lLl~~ga~in~~~~~g~  118 (471)
T PHA03095         44 GEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN--APERCGFTPLHLYLYNAT---TLDVIKLLIKAGADVNAKDKVGR  118 (471)
T ss_pred             CCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcCC---cHHHHHHHHHcCCCCCCCCCCCC
Confidence            334688999999999   9999999999999987  566689999999999983   23444899999999999999999


Q ss_pred             hHHHh------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHH
Q 002539          612 ITSEN------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ  684 (911)
Q Consensus       612 TpL~~------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~  684 (911)
                      ||||.      .+.+++++|+ .|++++..+                      ..+.++|+.++..+...          
T Consensus       119 tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d----------------------~~g~tpL~~a~~~~~~~----------  166 (471)
T PHA03095        119 TPLHVYLSGFNINPKVIRLLLRKGADVNALD----------------------LYGMTPLAVLLKSRNAN----------  166 (471)
T ss_pred             CHHHHHhhCCcCCHHHHHHHHHcCCCCCccC----------------------CCCCCHHHHHHHcCCCC----------
Confidence            99975      3567888877 555554322                      45677777666544222          


Q ss_pred             HHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc--CCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCH--H
Q 002539          685 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL--GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE--R  760 (911)
Q Consensus       685 ~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~--G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~--e  760 (911)
                              ..++++|++.|++++..|..|+||||+|+..  ++..+++.|+++|++++.+|..|+||||+||..|+.  .
T Consensus       167 --------~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~  238 (471)
T PHA03095        167 --------VELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRS  238 (471)
T ss_pred             --------HHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHH
Confidence                    1267778888888888888888888888765  677888888888888888888888888888888764  5


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHH
Q 002539          761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQ  835 (911)
Q Consensus       761 iVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~  835 (911)
                      +++.|++.|+++|.      +|..|+||||+|+..|+.+++++|+++|     ++++++|..|.||     ..+..++++
T Consensus       239 ~v~~ll~~g~din~------~d~~g~TpLh~A~~~~~~~~v~~LL~~g-----ad~n~~~~~g~tpl~~A~~~~~~~~v~  307 (471)
T PHA03095        239 LVLPLLIAGISINA------RNRYGQTPLHYAAVFNNPRACRRLIALG-----ADINAVSSDGNTPLSLMVRNNNGRAVR  307 (471)
T ss_pred             HHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHhCCHHHHH
Confidence            77888888888777      7778888888888888888888888777     6788888888877     445567888


Q ss_pred             HhhhcCCCCC
Q 002539          836 TVPQRCPTPV  845 (911)
Q Consensus       836 ~Lle~ga~~~  845 (911)
                      .|++.++++.
T Consensus       308 ~LL~~~~~~~  317 (471)
T PHA03095        308 AALAKNPSAE  317 (471)
T ss_pred             HHHHhCCCHH
Confidence            8888887653

>PHA02946 ankyin-like protein; Provisional

Probab=99.98  E-value=4.8e-31  Score=305.51  Aligned_cols=255  Identities=12%  Similarity=0.022  Sum_probs=202.8

Q ss_pred             CcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccc-cCCCCChH
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDV-ADNCGDIT  613 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~-~D~~G~Tp  613 (911)
                      +..+.||||+||..|+.++|++||++|++++  ..|..|+||||+|+.++.  ..+..+++|++.|++++. .|..|.||
T Consensus        69 d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin--~~d~~g~TpLh~A~~~~~--~~~e~v~lLl~~Gadin~~~d~~g~tp  144 (446)
T PHA02946         69 DDDGNYPLHIASKINNNRIVAMLLTHGADPN--ACDKQHKTPLYYLSGTDD--EVIERINLLVQYGAKINNSVDEEGCGP  144 (446)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC--CCCCCCCCHHHHHHHcCC--chHHHHHHHHHcCCCcccccCCCCCcH
Confidence            4567899999999999999999999999877  667789999999987764  234445889999999985 58889999


Q ss_pred             HHh---hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHH
Q 002539          614 SEN---LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       614 L~~---~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~  689 (911)
                      |+.   ++.+++++|+ .+++++..                      +..++++|+.++..+...               
T Consensus       145 L~aa~~~~~~vv~~Ll~~gad~~~~----------------------d~~G~t~Lh~A~~~~~~~---------------  187 (446)
T PHA02946        145 LLACTDPSERVFKKIMSIGFEARIV----------------------DKFGKNHIHRHLMSDNPK---------------  187 (446)
T ss_pred             HHHHHCCChHHHHHHHhcccccccc----------------------CCCCCCHHHHHHHhcCCC---------------
Confidence            964   5677777776 44444322                      357888998876544332               


Q ss_pred             hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcC--CHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHH
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG--YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-ERTVASLI  766 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G--~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~-~eiVklLL  766 (911)
                         ..++++|++.|++++.+|..|.||||+|+..|  +.+++++|+. |+++|.+|..|+||||+|+..++ .+++++|+
T Consensus       188 ---~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll  263 (446)
T PHA02946        188 ---ASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLL  263 (446)
T ss_pred             ---HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHH
Confidence               12677899999999999999999999999986  7899999985 99999999999999999999988 58999999


Q ss_pred             HcCCCCCCCC--------------CCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----
Q 002539          767 ALGAAPGALS--------------DPTPKY-PSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----  826 (911)
Q Consensus       767 ~~GAd~na~t--------------Dpn~~D-~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----  826 (911)
                      ++|++++..+              .++.++ ..|+||||+|+.+|+.++|++|+++|.            .|.||     
T Consensus       264 ~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~------------~~~t~L~~A~  331 (446)
T PHA02946        264 STSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI------------ICEDAMYYAV  331 (446)
T ss_pred             hCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC------------ccccHHHHHH
Confidence            9998753211              011122 358899999999999999999998762            34555     


Q ss_pred             hhhcHHHHHHhhhcCCCCCC
Q 002539          827 EVTGATAVQTVPQRCPTPVS  846 (911)
Q Consensus       827 ~~~~~~~V~~Lle~ga~~~~  846 (911)
                      ..+..++|+.|+.+|++++.
T Consensus       332 ~~~~~~~v~~Ll~~ga~~n~  351 (446)
T PHA02946        332 LSEYETMVDYLLFNHFSVDS  351 (446)
T ss_pred             HhCHHHHHHHHHHCCCCCCC
Confidence            55667999999999999885

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.98  E-value=4.6e-31  Score=306.99  Aligned_cols=254  Identities=18%  Similarity=0.131  Sum_probs=222.3

Q ss_pred             cccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHH-----HHHcCCCcchHHHHHHHHhCCCCccccCCCC
Q 002539          536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYV-----TCSNRLSCSEVREFEYRASHIPDVDVADNCG  610 (911)
Q Consensus       536 ~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhv-----Aa~nG~a~seVv~felLl~~GAdin~~D~~G  610 (911)
                      ..+.||||+|+..|+.++|++|++.|++++  ..+..|.||||+     |+..+.  .++  +++|++.|++++..|..|
T Consensus        33 ~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~--~~~~~~~t~L~~~~~~~a~~~~~--~~i--v~~Ll~~ga~i~~~d~~g  106 (480)
T PHA03100         33 KKPVLPLYLAKEARNIDVVKILLDNGADIN--SSTKNNSTPLHYLSNIKYNLTDV--KEI--VKLLLEYGANVNAPDNNG  106 (480)
T ss_pred             cccchhhhhhhccCCHHHHHHHHHcCCCCC--CccccCcCHHHHHHHHHHHhhch--HHH--HHHHHHCCCCCCCCCCCC
Confidence            356899999999999999999999999977  556679999999     999885  444  489999999999999999


Q ss_pred             ChHHHh------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHH
Q 002539          611 DITSEN------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLV  683 (911)
Q Consensus       611 ~TpL~~------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll  683 (911)
                      .|||+.      ++.+++++|+ .|++++..                      +..+.++|+.++..+..          
T Consensus       107 ~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~----------------------~~~g~t~L~~A~~~~~~----------  154 (480)
T PHA03100        107 ITPLLYAISKKSNSYSIVEYLLDNGANVNIK----------------------NSDGENLLHLYLESNKI----------  154 (480)
T ss_pred             CchhhHHHhcccChHHHHHHHHHcCCCCCcc----------------------CCCCCcHHHHHHHcCCC----------
Confidence            999974      5678888887 44444322                      25788899988875521          


Q ss_pred             HHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCC------CcHHHHHHHcC
Q 002539          684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNG------WTALHWAAYCG  757 (911)
Q Consensus       684 ~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G------~TPLH~Aa~~G  757 (911)
                              ...++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|      .||||+|+..|
T Consensus       155 --------~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~  226 (480)
T PHA03100        155 --------DLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYN  226 (480)
T ss_pred             --------hHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhC
Confidence                    1127889999999999999999999999999999999999999999999999999      99999999999


Q ss_pred             C--HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhc
Q 002539          758 R--ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTG  830 (911)
Q Consensus       758 ~--~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~  830 (911)
                      +  .++|++|+++|++++.      +|..|.||||+|+..|+.+++++|+++|     ++++.+|..|.||     ..+.
T Consensus       227 ~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~Ll~~g-----ad~n~~d~~g~tpl~~A~~~~~  295 (480)
T PHA03100        227 EITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKYLLDLG-----ANPNLVNKYGDTPLHIAILNNN  295 (480)
T ss_pred             cCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCcHHHHHHHhCC
Confidence            9  9999999999999888      8899999999999999999999999988     6899999999998     4456


Q ss_pred             HHHHHHhhhcCCCCCC
Q 002539          831 ATAVQTVPQRCPTPVS  846 (911)
Q Consensus       831 ~~~V~~Lle~ga~~~~  846 (911)
                      .++++.|+++|++.+.
T Consensus       296 ~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        296 KEIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHHHHHHhcCCCHHH
Confidence            7999999999998663

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.97  E-value=8.6e-31  Score=314.75  Aligned_cols=285  Identities=12%  Similarity=0.004  Sum_probs=211.5

Q ss_pred             CcccchHHHHHHH--cCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCCh
Q 002539          535 SQQEAENCKWSCM--FGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDI  612 (911)
Q Consensus       535 ~~~~~T~LH~Ac~--~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~T  612 (911)
                      +..+.||||+|+.  +|+.+++++|++.|++++  ..+..|.||||+|+.+|+.+.+++  ++|++.||++|.+|..|+|
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN--~kD~~G~TPLH~Aa~~g~~~~eIV--klLLe~GADVN~kD~~G~T  249 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVN--LQNNHLITPLHTYLITGNVCASVI--KKIIELGGDMDMKCVNGMS  249 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCCCHHHH--HHHHHcCCCCCCCCCCCCC
Confidence            4567899999864  578899999999999987  667789999999999985223444  8999999999999999999


Q ss_pred             HHHh-------hHHHHHHHHhcCCCCCCCCCCC------------CchhhhHH-HHHHHhhhccCCcchhHHHHHHhhcC
Q 002539          613 TSEN-------LRMQFGKLLCLTSVSTPNYDPS------------NLSDISQL-NSKISSLLKDENDDWDLMLKLTAEEK  672 (911)
Q Consensus       613 pL~~-------~~~~ivkLLl~ga~v~~~~~~~------------~~~~~~~l-~~~I~sl~~~d~~g~t~L~~a~~~~~  672 (911)
                      |||.       ++.+++++|+...+........            +..+..++ +..-..+...+..|.++||.++..+.
T Consensus       250 PLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~  329 (764)
T PHA02716        250 PIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHN  329 (764)
T ss_pred             HHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhC
Confidence            9984       4678888886533322211100            00111111 11111112234556666665543221


Q ss_pred             CChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHH--------------cCCHhHHHhHHhcCCC
Q 002539          673 FSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAA--------------LGYDWALEPTTVAGVN  738 (911)
Q Consensus       673 ~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~--------------~G~~eiVklLLe~GAd  738 (911)
                                        ....++++|++.|+++|.+|..|+||||+|+.              .|+.++|++|+++|++
T Consensus       330 ------------------~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GAD  391 (764)
T PHA02716        330 ------------------ISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGAD  391 (764)
T ss_pred             ------------------CCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCC
Confidence                              11227889999999999999999999999875              3789999999999999


Q ss_pred             ccccCCCCCcHHHHH----HHcCCHHHHHHHHHcCCCCCCC---------------------------------------
Q 002539          739 INFRDVNGWTALHWA----AYCGRERTVASLIALGAAPGAL---------------------------------------  775 (911)
Q Consensus       739 vN~~D~~G~TPLH~A----a~~G~~eiVklLL~~GAd~na~---------------------------------------  775 (911)
                      ++.+|..|+||||.|    ...++.++|++|++.|+.....                                       
T Consensus       392 In~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~  471 (764)
T PHA02716        392 ITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPY  471 (764)
T ss_pred             CCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhc
Confidence            999999999999943    2357899999999987532100                                       


Q ss_pred             ----------------CCCCCCCCCCCCHHHHHHHcCcHH-----HHHHHHHcCCCCccccCcccCCCCCcHhhhcH---
Q 002539          776 ----------------SDPTPKYPSGRTPADLASSIGHKG-----IAGYLAESDLSSALSAISLNKKDGDVAEVTGA---  831 (911)
Q Consensus       776 ----------------tDpn~~D~~G~TPLhlAa~~G~~e-----IvklLLe~G~~sh~adln~~D~~G~Ta~~~~~---  831 (911)
                                      .+++..|..|+||||+|+..|+.+     ++++|++.|     ++++++|++|.||...+.   
T Consensus       472 ~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G-----ADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        472 DSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ-----YNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             cccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCC-----CCCcccCCCCCCHHHHHHHcC
Confidence                            134567889999999999999874     459999888     799999999999933332   


Q ss_pred             -------HHHHHhhhcCCCCCC
Q 002539          832 -------TAVQTVPQRCPTPVS  846 (911)
Q Consensus       832 -------~~V~~Lle~ga~~~~  846 (911)
                             ++|+.|+++|+++..
T Consensus       547 ~~~~~~~eIvk~LL~~ga~~~~  568 (764)
T PHA02716        547 RLSGHQWYIVKNILDKRPNVDI  568 (764)
T ss_pred             CccccHHHHHHHHHhcCCCcch
Confidence                   899999999998774

>PHA02791 ankyrin-like protein; Provisional

Probab=99.97  E-value=2.1e-30  Score=282.99  Aligned_cols=221  Identities=10%  Similarity=-0.013  Sum_probs=179.9

Q ss_pred             ccCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCCh
Q 002539          533 LMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDI  612 (911)
Q Consensus       533 l~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~T  612 (911)
                      ..+..+.||||+||.+|+.++++.|++.|++++.  .  .|.||||+|+.+|+  .+++  ++|+..|++++.+|..|+|
T Consensus        25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~--~--d~~TpLh~Aa~~g~--~eiV--~lLL~~Gadvn~~d~~G~T   96 (284)
T PHA02791         25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL--L--ENEFPLHQAATLED--TKIV--KILLFSGMDDSQFDDKGNT   96 (284)
T ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC--C--CCCCHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCC
Confidence            3455678888888888888888888888887652  2  37888888888875  4444  7788888888888888888


Q ss_pred             HHHhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhH
Q 002539          613 TSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ  692 (911)
Q Consensus       613 pL~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~  692 (911)
                      |||                                                  .++..+..                   
T Consensus        97 pLh--------------------------------------------------~Aa~~g~~-------------------  107 (284)
T PHA02791         97 ALY--------------------------------------------------YAVDSGNM-------------------  107 (284)
T ss_pred             HHH--------------------------------------------------HHHHcCCH-------------------
Confidence            776                                                  22222221                   


Q ss_pred             HHHHHHHHhCCCCCCcccCCCC-cHHHHHHHcCCHhHHHhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 002539          693 VWLVQKAAEGGKGPCVLDHCGQ-GVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALGA  770 (911)
Q Consensus       693 ~~Lv~lLle~Gad~n~~D~~G~-TpLH~AA~~G~~eiVklLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~~GA  770 (911)
                       .++++|+++|++++.++..|+ ||||+||..|+.++|++||++|.+.  .| ..|+||||+||..|+.++|++||++||
T Consensus       108 -eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA  184 (284)
T PHA02791        108 -QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMT  184 (284)
T ss_pred             -HHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCC
Confidence             167788999999999999885 8999999999999999999998654  23 358999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCH-HHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhhhcHHHHHHhhhcCCCCCC
Q 002539          771 APGALSDPTPKYPSGRTP-ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVS  846 (911)
Q Consensus       771 d~na~tDpn~~D~~G~TP-LhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~~~~~~V~~Lle~ga~~~~  846 (911)
                      +++.      +|..|.|| ||+|+..|+.+++++|+++|     ++++.+|.+| + ..+..++++.|++.-++..+
T Consensus       185 d~n~------~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G-----a~in~~~~~~-~-~l~~~e~~~~ll~~~~~~~~  248 (284)
T PHA02791        185 STNT------NNSLLFIPDIKLAIDNKDLEMLQALFKYD-----INIYSVNLEN-V-LLDDAEIAKMIIEKHVEYKS  248 (284)
T ss_pred             CCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHCC-----CCCccCcccC-c-cCCCHHHHHHHHHhhhhhcc
Confidence            9887      78899987 99999999999999999888     6899999865 3 34777899999999887554

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.97  E-value=4.7e-30  Score=299.55  Aligned_cols=252  Identities=15%  Similarity=0.107  Sum_probs=201.1

Q ss_pred             cchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHH--
Q 002539          538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE--  615 (911)
Q Consensus       538 ~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~--  615 (911)
                      +.||||+||..|+.++|++|++.|++++  ..+..|+||||+||..|+  .++  +++|+..+...+.  ..+.++++  
T Consensus        37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn--~~d~~g~TpLh~A~~~g~--~~~--v~~Ll~~~~~~~~--~~~~~~l~~a  108 (477)
T PHA02878         37 PFIPLHQAVEARNLDVVKSLLTRGHNVN--QPDHRDLTPLHIICKEPN--KLG--MKEMIRSINKCSV--FYTLVAIKDA  108 (477)
T ss_pred             CcchHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCcc--HhH--HHHHHHHHhcccc--ccchhhHHHH
Confidence            5689999999999999999999999977  667789999999999985  344  4778877765554  45667764  


Q ss_pred             --hhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHH
Q 002539          616 --NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV  693 (911)
Q Consensus       616 --~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~  693 (911)
                        .++.+++++|+..........                       ....+.....                  ......
T Consensus       109 ~~~~~~ei~~~Ll~~~~~~~~~~-----------------------~~~~~~~~~~------------------~~~~~~  147 (477)
T PHA02878        109 FNNRNVEIFKIILTNRYKNIQTI-----------------------DLVYIDKKSK------------------DDIIEA  147 (477)
T ss_pred             HHcCCHHHHHHHHhCcccCcccC-----------------------cHHHHhhccc------------------hhhHHH
Confidence              377888888874321111000                       0000000000                  001112


Q ss_pred             HHHHHHHhCCCCCCcccCC-CCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 002539          694 WLVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP  772 (911)
Q Consensus       694 ~Lv~lLle~Gad~n~~D~~-G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~  772 (911)
                      .++++|+++|+++|.++.. |.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|++.|+++
T Consensus       148 ~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i  227 (477)
T PHA02878        148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST  227 (477)
T ss_pred             HHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence            3788899999999999998 999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCccccCcccCC-CCCcHh---hhcHHHHHHhhhcCCCCCCC
Q 002539          773 GALSDPTPKYPSGRTPADLASSI-GHKGIAGYLAESDLSSALSAISLNKK-DGDVAE---VTGATAVQTVPQRCPTPVSD  847 (911)
Q Consensus       773 na~tDpn~~D~~G~TPLhlAa~~-G~~eIvklLLe~G~~sh~adln~~D~-~G~Ta~---~~~~~~V~~Lle~ga~~~~~  847 (911)
                      +.      +|..|+||||+|+.. ++.+++++|+++|     ++++.++. .|.||.   ....++++.|++.|++++..
T Consensus       228 n~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g-----advn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~  296 (477)
T PHA02878        228 DA------RDKCGNTPLHISVGYCKDYDILKLLLEHG-----VDVNAKSYILGLTALHSSIKSERKLKLLLEYGADINSL  296 (477)
T ss_pred             CC------CCCCCCCHHHHHHHhcCCHHHHHHHHHcC-----CCCCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCc
Confidence            87      889999999999975 7899999999988     68898886 799883   45568999999999998876


Q ss_pred             CC
Q 002539          848 GD  849 (911)
Q Consensus       848 ~~  849 (911)
                      +.
T Consensus       297 d~  298 (477)
T PHA02878        297 NS  298 (477)
T ss_pred             CC
Confidence            54

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.97  E-value=4.4e-30  Score=293.76  Aligned_cols=230  Identities=15%  Similarity=0.054  Sum_probs=197.6

Q ss_pred             chHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh--
Q 002539          539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN--  616 (911)
Q Consensus       539 ~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~--  616 (911)
                      .++||.||.+|+.+++++|++.|++++  ..+..|.||||+|+..|+  .+++  ++|++.|++++..+..+.||||.  
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n--~~~~~g~tpL~~A~~~~~--~~~v--~~Ll~~ga~~~~~~~~~~t~L~~A~   76 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPN--FEIYDGISPIKLAMKFRD--SEAI--KLLMKHGAIPDVKYPDIESELHDAV   76 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCC--ccCCCCCCHHHHHHHcCC--HHHH--HHHHhCCCCccccCCCcccHHHHHH
Confidence            579999999999999999999999977  455679999999999985  4544  89999999999999999999975  


Q ss_pred             --hHHHHHHHHhc-CCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHH
Q 002539          617 --LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV  693 (911)
Q Consensus       617 --~~~~ivkLLl~-ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~  693 (911)
                        ++.+++++|+. ++.....                     .+..+.++|+.|+..+..+                   
T Consensus        77 ~~g~~~~v~~Ll~~~~~~~~~---------------------~~~~g~tpL~~A~~~~~~~-------------------  116 (413)
T PHA02875         77 EEGDVKAVEELLDLGKFADDV---------------------FYKDGMTPLHLATILKKLD-------------------  116 (413)
T ss_pred             HCCCHHHHHHHHHcCCccccc---------------------ccCCCCCHHHHHHHhCCHH-------------------
Confidence              78888888874 3332211                     1246788999887755432                   


Q ss_pred             HHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       694 ~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                       +++.|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++||++||+++
T Consensus       117 -iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n  195 (413)
T PHA02875        117 -IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID  195 (413)
T ss_pred             -HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence             8889999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCC-CCHHHHHHHcCcHHHHHHHHHcCCCCccccCccc---CCCCCcH
Q 002539          774 ALSDPTPKYPSG-RTPADLASSIGHKGIAGYLAESDLSSALSAISLN---KKDGDVA  826 (911)
Q Consensus       774 a~tDpn~~D~~G-~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~---D~~G~Ta  826 (911)
                      .      .+..| .||+|+|+..|+.+++++|+++|     +++++.   +.++.|+
T Consensus       196 ~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g-----ad~n~~~~~~~~~~t~  241 (413)
T PHA02875        196 Y------FGKNGCVAALCYAIENNKIDIVRLFIKRG-----ADCNIMFMIEGEECTI  241 (413)
T ss_pred             c------CCCCCCchHHHHHHHcCCHHHHHHHHHCC-----cCcchHhhcCCCchHH
Confidence            8      55565 58999999999999999999988     566665   4455555

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1e-29  Score=309.04  Aligned_cols=275  Identities=12%  Similarity=0.017  Sum_probs=209.7

Q ss_pred             CcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHH-----------------------
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVR-----------------------  591 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv-----------------------  591 (911)
                      +..+.||||+||..|+.++|++|++.|++++  ..+..|.||||+|+..|+  .+++                       
T Consensus       175 d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n--~~~~~g~t~L~~A~~~~~--~~ivk~Ll~~~~~~~~~~~~L~~ai~~  250 (682)
T PHA02876        175 DIYCITPIHYAAERGNAKMVNLLLSYGADVN--IIALDDLSVLECAVDSKN--IDTIKAIIDNRSNINKNDLSLLKAIRN  250 (682)
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC--ccCCCCCCHHHHHHHcCC--HHHHHHHHhcCCCCCCCcHHHHHHHHc
Confidence            4457899999999999999999999999977  556669999999998875  3332                       


Q ss_pred             ----HHHHHHhCCCCccccCCCCChHHHh----hH-HHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcch
Q 002539          592 ----EFEYRASHIPDVDVADNCGDITSEN----LR-MQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDW  661 (911)
Q Consensus       592 ----~felLl~~GAdin~~D~~G~TpL~~----~~-~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~  661 (911)
                          .+++|+..|++++..|..|.||||.    ++ .+++++|+ .+++++..+                      ..+.
T Consensus       251 ~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d----------------------~~g~  308 (682)
T PHA02876        251 EDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN----------------------IKGE  308 (682)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcC----------------------CCCC
Confidence                2246677788888888889999976    22 35667665 555554432                      2233


Q ss_pred             hHHHHHHhhcC------------CCh---HHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCH
Q 002539          662 DLMLKLTAEEK------------FSS---EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYD  726 (911)
Q Consensus       662 t~L~~a~~~~~------------~~~---~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~  726 (911)
                      ++|+.++..+.            .+.   .......++.++.......++++|++.|+++|.+|..|+||||+|+..|+.
T Consensus       309 TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~  388 (682)
T PHA02876        309 TPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNV  388 (682)
T ss_pred             CHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCH
Confidence            33333332221            000   001112344444433334477889999999999999999999999999999


Q ss_pred             hHHHhHHhcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-cHHHHHHH
Q 002539          727 WALEPTTVAGVNINFRDVNGWTALHWAAYCGR-ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG-HKGIAGYL  804 (911)
Q Consensus       727 eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~-~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G-~~eIvklL  804 (911)
                      ++|++|+++|++++..+..|.||||+|+..++ ..+|++|++.|+++|.      +|..|+||||+|+..| +.+++++|
T Consensus       389 ~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lL  462 (682)
T PHA02876        389 VIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEML  462 (682)
T ss_pred             HHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHH
Confidence            99999999999999999999999999987665 5679999999999888      8899999999999977 68999999


Q ss_pred             HHcCCCCccccCcccCCCCCcHhhh---cHHHHHHhhhcCCCCCC
Q 002539          805 AESDLSSALSAISLNKKDGDVAEVT---GATAVQTVPQRCPTPVS  846 (911)
Q Consensus       805 Le~G~~sh~adln~~D~~G~Ta~~~---~~~~V~~Lle~ga~~~~  846 (911)
                      +++|     ++++.+|..|.||...   ...+|+.|+..|++...
T Consensus       463 l~~G-----ad~n~~d~~g~tpl~~a~~~~~~v~~Ll~~~a~~~~  502 (682)
T PHA02876        463 LDNG-----ADVNAINIQNQYPLLIALEYHGIVNILLHYGAELRD  502 (682)
T ss_pred             HHCC-----CCCCCCCCCCCCHHHHHHHhCCHHHHHHHCCCCCCc
Confidence            9988     6899999999998432   33689999999987653

>PHA02946 ankyin-like protein; Provisional

Probab=99.97  E-value=1.1e-29  Score=294.25  Aligned_cols=250  Identities=12%  Similarity=0.072  Sum_probs=200.2

Q ss_pred             chHHHHHHHc--CCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh
Q 002539          539 AENCKWSCMF--GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN  616 (911)
Q Consensus       539 ~T~LH~Ac~~--G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~  616 (911)
                      .++||.+|..  ++.++|++||+.|+++|  ..+..|+||||+||..|+  .+++  ++|+++|+++|.+|..|.||||.
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn--~~d~~G~TpLh~Aa~~g~--~eiv--~lLL~~GAdin~~d~~g~TpLh~  111 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPN--ETDDDGNYPLHIASKINN--NRIV--AMLLTHGADPNACDKQHKTPLYY  111 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCC--ccCCCCCCHHHHHHHcCC--HHHH--HHHHHCcCCCCCCCCCCCCHHHH
Confidence            5699998853  46689999999999987  677789999999999996  5555  89999999999999999999985


Q ss_pred             ------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHH
Q 002539          617 ------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       617 ------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~  689 (911)
                            ...+++++|+ .|++++...                     +..+.++|+. +..+..                
T Consensus       112 A~~~~~~~~e~v~lLl~~Gadin~~~---------------------d~~g~tpL~a-a~~~~~----------------  153 (446)
T PHA02946        112 LSGTDDEVIERINLLVQYGAKINNSV---------------------DEEGCGPLLA-CTDPSE----------------  153 (446)
T ss_pred             HHHcCCchHHHHHHHHHcCCCccccc---------------------CCCCCcHHHH-HHCCCh----------------
Confidence                  2367777776 666654322                     2567778863 322221                


Q ss_pred             hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCC--HhHHHhHHhcCCCccccCCCCCcHHHHHHHcC--CHHHHHHH
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY--DWALEPTTVAGVNINFRDVNGWTALHWAAYCG--RERTVASL  765 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~--~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G--~~eiVklL  765 (911)
                          .++++|++.|++++.+|..|+||||+|+..++  .+++++|+++|+++|.+|.+|+||||+||..|  +.+++++|
T Consensus       154 ----~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lL  229 (446)
T PHA02946        154 ----RVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLL  229 (446)
T ss_pred             ----HHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHH
Confidence                27788999999999999999999999988654  68999999999999999999999999999986  88999999


Q ss_pred             HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCcccc---------------CcccC-CCCCcH--
Q 002539          766 IALGAAPGALSDPTPKYPSGRTPADLASSIGH-KGIAGYLAESDLSSALSA---------------ISLNK-KDGDVA--  826 (911)
Q Consensus       766 L~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~-~eIvklLLe~G~~sh~ad---------------ln~~D-~~G~Ta--  826 (911)
                      +. |+++|.      +|..|+||||+|+..++ .+++++|+++|.......               ++.++ ..|.||  
T Consensus       230 l~-gadin~------~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh  302 (446)
T PHA02946        230 LP-STDVNK------QNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFK  302 (446)
T ss_pred             Hc-CCCCCC------CCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHH
Confidence            95 898887      89999999999999998 589999999874311100               11222 246677  


Q ss_pred             ---hhhcHHHHHHhhhcCCC
Q 002539          827 ---EVTGATAVQTVPQRCPT  843 (911)
Q Consensus       827 ---~~~~~~~V~~Lle~ga~  843 (911)
                         ..+..++|+.|+++|++
T Consensus       303 ~Aa~~g~~eivk~Ll~~~~~  322 (446)
T PHA02946        303 MAVEVGSIRCVKYLLDNDII  322 (446)
T ss_pred             HHHHcCCHHHHHHHHHCCCc
Confidence               45677999999999864

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.97  E-value=2.9e-29  Score=289.45  Aligned_cols=269  Identities=16%  Similarity=0.056  Sum_probs=188.3

Q ss_pred             HHHHHHHcCCcHHHHHHHHCC-CCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh---
Q 002539          541 NCKWSCMFGEIEVPAEIVAGG-VLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN---  616 (911)
Q Consensus       541 ~LH~Ac~~G~~eVV~~LL~~G-advn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~---  616 (911)
                      .|..||..|++++++.|++.+ ..++  ..+..|.||||+|+..|+  .+++  ++|++.|++++..+..|.|||+.   
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n--~~~~~~~tpL~~A~~~g~--~~iv--~~Ll~~Ga~~n~~~~~~~t~L~~A~~   77 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCIN--ISVDETTTPLIDAIRSGD--AKIV--ELFIKHGADINHINTKIPHPLLTAIK   77 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCC--CcCCCCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            578889999999998888754 3333  445668899999998886  4554  78888999998888888888864   


Q ss_pred             -hHHHHHHHHh-cCCCCCCCCCCCCchhhhHH-HHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHH
Q 002539          617 -LRMQFGKLLC-LTSVSTPNYDPSNLSDISQL-NSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV  693 (911)
Q Consensus       617 -~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l-~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~  693 (911)
                       ++.+++++|+ .|++...........+.... ...-..+...+..+.++|+.++..+...                   
T Consensus        78 ~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~-------------------  138 (434)
T PHA02874         78 IGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLE-------------------  138 (434)
T ss_pred             cCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHH-------------------
Confidence             7788888887 44443221111111111111 1111112223456777777776654432                   


Q ss_pred             HHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       694 ~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                       +++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|++.|++++
T Consensus       139 -~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~  217 (434)
T PHA02874        139 -SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIM  217 (434)
T ss_pred             -HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence             7788899999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh------hcHHHHHHhhhcCCCCCCC
Q 002539          774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV------TGATAVQTVPQRCPTPVSD  847 (911)
Q Consensus       774 a~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~------~~~~~V~~Lle~ga~~~~~  847 (911)
                      .      ++..|.||||+|+..++ .++.+|+ .|     ++++.+|..|.||..      +..++++.|+++|++++..
T Consensus       218 ~------~~~~g~TpL~~A~~~~~-~~i~~Ll-~~-----~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~  284 (434)
T PHA02874        218 N------KCKNGFTPLHNAIIHNR-SAIELLI-NN-----ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIK  284 (434)
T ss_pred             C------CCCCCCCHHHHHHHCCh-HHHHHHH-cC-----CCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC
Confidence            6      55566666666666544 3444444 23     355666666666521      1345666666666665544


Q ss_pred             C
Q 002539          848 G  848 (911)
Q Consensus       848 ~  848 (911)
                      +
T Consensus       285 d  285 (434)
T PHA02874        285 D  285 (434)
T ss_pred             C
Confidence            3

>PHA03095 ankyrin-like protein; Provisional

Probab=99.97  E-value=2.1e-29  Score=292.20  Aligned_cols=225  Identities=22%  Similarity=0.186  Sum_probs=191.8

Q ss_pred             CcccchHHHHHHHcC-CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChH
Q 002539          535 SQQEAENCKWSCMFG-EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT  613 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G-~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~Tp  613 (911)
                      +..|.||||+||..| ..+++++|++.|++++  ..+..|+||||+||....  ....++++|++.|++++..|..|.||
T Consensus        80 ~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in--~~~~~g~tpLh~a~~~~~--~~~~iv~~Ll~~gad~~~~d~~g~tp  155 (471)
T PHA03095         80 ERCGFTPLHLYLYNATTLDVIKLLIKAGADVN--AKDKVGRTPLHVYLSGFN--INPKVIRLLLRKGADVNALDLYGMTP  155 (471)
T ss_pred             CCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCC--CCCCCCCCHHHHHhhCCc--CCHHHHHHHHHcCCCCCccCCCCCCH
Confidence            346789999999999 5999999999999977  677789999999995442  23444589999999999999999999


Q ss_pred             HHh------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHH
Q 002539          614 SEN------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKL  686 (911)
Q Consensus       614 L~~------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a  686 (911)
                      ||.      ...+++++|+ .|++....                      +..+.++|+.++......            
T Consensus       156 L~~a~~~~~~~~~iv~~Ll~~g~~~~~~----------------------d~~g~t~Lh~~~~~~~~~------------  201 (471)
T PHA03095        156 LAVLLKSRNANVELLRLLIDAGADVYAV----------------------DDRFRSLLHHHLQSFKPR------------  201 (471)
T ss_pred             HHHHHHcCCCCHHHHHHHHHcCCCCccc----------------------CCCCCCHHHHHHHHCCCc------------
Confidence            974      3567888877 55544332                      256788888776532221            


Q ss_pred             HHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCH--hHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 002539          687 LKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYD--WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS  764 (911)
Q Consensus       687 ~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~--eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVkl  764 (911)
                            ..+++.|++.|++++.+|..|.||||+||..|+.  .+++.|++.|+++|.+|..|+||||+|+..|+.++|++
T Consensus       202 ------~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~  275 (471)
T PHA03095        202 ------ARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRR  275 (471)
T ss_pred             ------HHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence                  2277889999999999999999999999999975  68899999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 002539          765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       765 LL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~  809 (911)
                      ||+.|||+++      +|..|+||||+|+.+|+.+++++|++.++
T Consensus       276 LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~  314 (471)
T PHA03095        276 LIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNP  314 (471)
T ss_pred             HHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCC
Confidence            9999999988      88999999999999999999999999884

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=1.8e-30  Score=256.27  Aligned_cols=180  Identities=25%  Similarity=0.290  Sum_probs=145.3

Q ss_pred             ccCcccchHHHHHHHcCCcHHHHHHH-HCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhC-CCCccccCCCC
Q 002539          533 LMSQQEAENCKWSCMFGEIEVPAEIV-AGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASH-IPDVDVADNCG  610 (911)
Q Consensus       533 l~~~~~~T~LH~Ac~~G~~eVV~~LL-~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~-GAdin~~D~~G  610 (911)
                      ..++++.|||||||.||+.++|.+|+ +.++.+|  ..|..|+||||+||.+|.  .+|+  +-|+.+ |+++|+.++.|
T Consensus        33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~d--dkDdaGWtPlhia~s~g~--~evV--k~Ll~r~~advna~tn~G  106 (226)
T KOG4412|consen   33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPD--DKDDAGWTPLHIAASNGN--DEVV--KELLNRSGADVNATTNGG  106 (226)
T ss_pred             cccccCCceeeeeeecCchhHHHHHHhcCCCCCC--CccccCCchhhhhhhcCc--HHHH--HHHhcCCCCCcceecCCC
Confidence            34456788999999999999999998 5555544  678889999999999884  6777  445544 89999988888


Q ss_pred             ChHHHhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHh
Q 002539          611 DITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK  690 (911)
Q Consensus       611 ~TpL~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~  690 (911)
                      +|+||+                                                  ++..+..                 
T Consensus       107 ~T~LHy--------------------------------------------------AagK~r~-----------------  119 (226)
T KOG4412|consen  107 QTCLHY--------------------------------------------------AAGKGRL-----------------  119 (226)
T ss_pred             cceehh--------------------------------------------------hhcCChh-----------------
Confidence            888773                                                  1111111                 


Q ss_pred             hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 002539          691 LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA  770 (911)
Q Consensus       691 l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GA  770 (911)
                         .+.++|+++|+.|+.+|..|+||||.||.-|..+++++|+..|+.+|.+|+.||||||.|...|+.++..+|+++||
T Consensus       120 ---eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gA  196 (226)
T KOG4412|consen  120 ---EIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGA  196 (226)
T ss_pred             ---hHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhcc
Confidence               16678889999999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHc
Q 002539          771 APGALSDPTPKYPSGRTPADLASSI  795 (911)
Q Consensus       771 d~na~tDpn~~D~~G~TPLhlAa~~  795 (911)
                      +++.      .|+.| ||+-.|+-.
T Consensus       197 d~~~------edke~-t~~~~a~~~  214 (226)
T KOG4412|consen  197 DTDR------EDKEG-TALRIACNE  214 (226)
T ss_pred             ceee------ccccC-chHHHHHHH
Confidence            9887      77888 998877643

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.97  E-value=6.7e-29  Score=301.95  Aligned_cols=295  Identities=14%  Similarity=-0.003  Sum_probs=221.3

Q ss_pred             cchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh-
Q 002539          538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN-  616 (911)
Q Consensus       538 ~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~-  616 (911)
                      ..++++.|+..|+.+++++|++.|+++|  ..+..|.||||+||.+|+  .+++  ++|++.|++++..+..|.|||+. 
T Consensus       145 ~~~~l~~~i~~~~~~i~k~Ll~~Gadvn--~~d~~G~TpLh~Aa~~G~--~~iv--~~LL~~Gad~n~~~~~g~t~L~~A  218 (682)
T PHA02876        145 YMKLIKERIQQDELLIAEMLLEGGADVN--AKDIYCITPIHYAAERGN--AKMV--NLLLSYGADVNIIALDDLSVLECA  218 (682)
T ss_pred             hhHHHHHHHHCCcHHHHHHHHhCCCCCC--CCCCCCCCHHHHHHHCCC--HHHH--HHHHHCCCCcCccCCCCCCHHHHH
Confidence            3679999999999999999999999987  667789999999999996  4555  89999999999999999999975 


Q ss_pred             ---hHHHHHHHHhcC-CCCCCCCC------CCCchhhhHH-HHHHHhhhccCCcchhHHHHHHhhcCCCh----------
Q 002539          617 ---LRMQFGKLLCLT-SVSTPNYD------PSNLSDISQL-NSKISSLLKDENDDWDLMLKLTAEEKFSS----------  675 (911)
Q Consensus       617 ---~~~~ivkLLl~g-a~v~~~~~------~~~~~~~~~l-~~~I~sl~~~d~~g~t~L~~a~~~~~~~~----------  675 (911)
                         ++.+++++|+.. ........      ..+..+...+ ...-......+..+.++|+.++..+....          
T Consensus       219 ~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~ga  298 (682)
T PHA02876        219 VDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGA  298 (682)
T ss_pred             HHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCC
Confidence               778889888743 33221110      0000000000 00001122234568889988876554321          


Q ss_pred             -----HHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc-CCHhHHHhHHhcCCCccccCCCCCcH
Q 002539          676 -----EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL-GYDWALEPTTVAGVNINFRDVNGWTA  749 (911)
Q Consensus       676 -----~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~-G~~eiVklLLe~GAdvN~~D~~G~TP  749 (911)
                           .......++.++..+....+++.|+..|++++.+|..|+||||+|+.. +..+++++|++.|+++|.+|..|+||
T Consensus       299 din~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~Tp  378 (682)
T PHA02876        299 DVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTP  378 (682)
T ss_pred             CCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCH
Confidence                 001123456666655334477888888889988888899999998885 46888888889999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCccccCcccCCCCCcHhh
Q 002539          750 LHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH-KGIAGYLAESDLSSALSAISLNKKDGDVAEV  828 (911)
Q Consensus       750 LH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~-~eIvklLLe~G~~sh~adln~~D~~G~Ta~~  828 (911)
                      ||+|+..|+.++|++|+++|++++.      .+..|.||||+|+..++ ..++++|++.|     ++++.+|..|+||..
T Consensus       379 Lh~Aa~~~~~~iv~~Ll~~gad~~~------~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g-----adin~~d~~G~TpLh  447 (682)
T PHA02876        379 IHYAAVRNNVVIINTLLDYGADIEA------LSQKIGTALHFALCGTNPYMSVKTLIDRG-----ANVNSKNKDLSTPLH  447 (682)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCccc------cCCCCCchHHHHHHcCCHHHHHHHHHhCC-----CCCCcCCCCCChHHH
Confidence            9999999999999999999998877      67788899999887665 56788898877     689999999999832


Q ss_pred             ------hcHHHHHHhhhcCCCCCCCCC
Q 002539          829 ------TGATAVQTVPQRCPTPVSDGD  849 (911)
Q Consensus       829 ------~~~~~V~~Lle~ga~~~~~~~  849 (911)
                            +..++++.|++.|++++..+.
T Consensus       448 ~Aa~~~~~~~iv~lLl~~Gad~n~~d~  474 (682)
T PHA02876        448 YACKKNCKLDVIEMLLDNGADVNAINI  474 (682)
T ss_pred             HHHHhCCcHHHHHHHHHCCCCCCCCCC
Confidence                  246899999999999886543

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=5e-30  Score=253.07  Aligned_cols=202  Identities=24%  Similarity=0.231  Sum_probs=170.6

Q ss_pred             chHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHH-hCCCCccccCCCCChHHHhh
Q 002539          539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRA-SHIPDVDVADNCGDITSENL  617 (911)
Q Consensus       539 ~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl-~~GAdin~~D~~G~TpL~~~  617 (911)
                      .++.+.+|+.-...-|++|++.....-....|.+||||||+||.-||  .+++  .||+ ..+..+|.+|..|+||||  
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~--~eiv--~fLlsq~nv~~ddkDdaGWtPlh--   77 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGH--VEIV--YFLLSQPNVKPDDKDDAGWTPLH--   77 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCc--hhHH--HHHHhcCCCCCCCccccCCchhh--
Confidence            45789999999999999999876621112335589999999999997  6777  4555 566667777666666665  


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHH
Q 002539          618 RMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQ  697 (911)
Q Consensus       618 ~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~  697 (911)
                                                                      .++..++.                    .+++
T Consensus        78 ------------------------------------------------ia~s~g~~--------------------evVk   89 (226)
T KOG4412|consen   78 ------------------------------------------------IAASNGND--------------------EVVK   89 (226)
T ss_pred             ------------------------------------------------hhhhcCcH--------------------HHHH
Confidence                                                            33332221                    1666


Q ss_pred             HHHhC-CCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002539          698 KAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS  776 (911)
Q Consensus       698 lLle~-Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~t  776 (911)
                      .|+.+ |+|+|..+..|+|+||+||..|..+|+++|+++|+.|+.+|..|.||||-||.-|..+++++|+..||.+|.  
T Consensus        90 ~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~--  167 (226)
T KOG4412|consen   90 ELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT--  167 (226)
T ss_pred             HHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc--
Confidence            77766 999999999999999999999999999999999999999999999999999999999999999999999988  


Q ss_pred             CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       777 Dpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                          +|+.|+||||.|...||.+++.+|+++|     |++.+.|++| |+
T Consensus       168 ----qDk~G~TpL~~al~e~~~d~a~lLV~~g-----Ad~~~edke~-t~  207 (226)
T KOG4412|consen  168 ----QDKYGFTPLHHALAEGHPDVAVLLVRAG-----ADTDREDKEG-TA  207 (226)
T ss_pred             ----ccccCccHHHHHHhccCchHHHHHHHhc-----cceeeccccC-ch
Confidence                9999999999999999999999999888     7999999999 65

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.6e-28  Score=287.99  Aligned_cols=253  Identities=11%  Similarity=0.011  Sum_probs=191.7

Q ss_pred             ccchHHHHHHHcC--CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCc--chHHHHHHHHhCCCCccccCCCCCh
Q 002539          537 QEAENCKWSCMFG--EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSC--SEVREFEYRASHIPDVDVADNCGDI  612 (911)
Q Consensus       537 ~~~T~LH~Ac~~G--~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~--seVv~felLl~~GAdin~~D~~G~T  612 (911)
                      .+.|+||+++..+  +.++|++||+.|+++|..  + .|.||||.|+.++...  ....++++|+++|+++|.+|..|.|
T Consensus        34 ~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~--~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t  110 (494)
T PHA02989         34 RGNSILLLYLKRKDVKIKIVKLLIDNGADVNYK--G-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVS  110 (494)
T ss_pred             CCCCHHHHHHhcCCCChHHHHHHHHcCCCccCC--C-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCc
Confidence            4667877665543  678888888888888743  2 4688888887765311  1123447888888888888888888


Q ss_pred             HHHh-------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHH
Q 002539          613 TSEN-------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ  684 (911)
Q Consensus       613 pL~~-------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~  684 (911)
                      ||+.       ++.+++++|+ .|++++..                     .+..|+++|+.++......          
T Consensus       111 pL~~a~~~~~~~~~eiv~~Ll~~Gadin~~---------------------~d~~g~tpLh~a~~~~~~~----------  159 (494)
T PHA02989        111 PIVCFIYNSNINNCDMLRFLLSKGINVNDV---------------------KNSRGYNLLHMYLESFSVK----------  159 (494)
T ss_pred             HHHHHHHhcccCcHHHHHHHHHCCCCcccc---------------------cCCCCCCHHHHHHHhccCC----------
Confidence            8887       2467788776 55555221                     1257888888776532211          


Q ss_pred             HHHHHhhHHHHHHHHHhCCCCCCc-ccCCCCcHHHHHHHcC----CHhHHHhHHhcCCCccccCCCCCcHHHHHHHcC--
Q 002539          685 KLLKEKLQVWLVQKAAEGGKGPCV-LDHCGQGVLHFAAALG----YDWALEPTTVAGVNINFRDVNGWTALHWAAYCG--  757 (911)
Q Consensus       685 ~a~k~~l~~~Lv~lLle~Gad~n~-~D~~G~TpLH~AA~~G----~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G--  757 (911)
                              ..++++|+++|++++. .+..|.||||+|+..+    +.++|++|+++|+++|.+|..|.||||.|+..+  
T Consensus       160 --------~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~  231 (494)
T PHA02989        160 --------KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKI  231 (494)
T ss_pred             --------HHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchh
Confidence                    2277888888888887 5778889998887654    788889999999988888888888888776543  


Q ss_pred             ----CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hh
Q 002539          758 ----RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EV  828 (911)
Q Consensus       758 ----~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~  828 (911)
                          ..+++++|+. |+++|.      +|..|+||||+|+..|+.+++++|+++|     ++++.+|..|.||     ..
T Consensus       232 ~~~~~~~il~~l~~-~advn~------~d~~G~TpL~~Aa~~~~~~~v~~LL~~G-----adin~~d~~G~TpL~~A~~~  299 (494)
T PHA02989        232 LSKKEFKVLNFILK-YIKINK------KDKKGFNPLLISAKVDNYEAFNYLLKLG-----DDIYNVSKDGDTVLTYAIKH  299 (494)
T ss_pred             hcccchHHHHHHHh-CCCCCC------CCCCCCCHHHHHHHhcCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHc
Confidence                4667776654 688777      8899999999999999999999999988     7999999999998     45


Q ss_pred             hcHHHHHHhhhcCCC
Q 002539          829 TGATAVQTVPQRCPT  843 (911)
Q Consensus       829 ~~~~~V~~Lle~ga~  843 (911)
                      +..++|+.|+++++.
T Consensus       300 ~~~~iv~~LL~~~p~  314 (494)
T PHA02989        300 GNIDMLNRILQLKPG  314 (494)
T ss_pred             CCHHHHHHHHhcCCC
Confidence            667999999998764

>PHA02730 ankyrin-like protein; Provisional

Probab=99.96  E-value=3.9e-28  Score=287.27  Aligned_cols=295  Identities=12%  Similarity=0.031  Sum_probs=209.2

Q ss_pred             cCcccchHHHHHHHcC---CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCC--CccccCC
Q 002539          534 MSQQEAENCKWSCMFG---EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP--DVDVADN  608 (911)
Q Consensus       534 ~~~~~~T~LH~Ac~~G---~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GA--din~~D~  608 (911)
                      .+..|.||||||+..|   +.++|++||++||+++  ..|..|+||||+|+..++...+++  ++|++.|+  +++..|.
T Consensus        37 kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin--~kD~~G~TPLh~Aa~~~~~~~eIv--~~Ll~~~~~~~~~~~~~  112 (672)
T PHA02730         37 IDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERL--CRNNEGLTPLGVYSKRKYVKSQIV--HLLISSYSNASNELTSN  112 (672)
T ss_pred             cCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCc--ccCCCCCChHHHHHHcCCCcHHHH--HHHHhcCCCCCcccccc
Confidence            3456889999999997   5899999999999987  778889999999998764225555  78898865  4477777


Q ss_pred             CCChHHHh------hHHHHHHHHhc----------------------------------------CCCCCC-------CC
Q 002539          609 CGDITSEN------LRMQFGKLLCL----------------------------------------TSVSTP-------NY  635 (911)
Q Consensus       609 ~G~TpL~~------~~~~ivkLLl~----------------------------------------ga~v~~-------~~  635 (911)
                      .+.+||+.      ++.+++++|+.                                        |++++.       ..
T Consensus       113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~  192 (672)
T PHA02730        113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD  192 (672)
T ss_pred             cCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence            77777754      44466666652                                        222210       00


Q ss_pred             CCCCchhh---------------hHHHHHH----HhhhccCCcchhHHHHHHhh--------------------------
Q 002539          636 DPSNLSDI---------------SQLNSKI----SSLLKDENDDWDLMLKLTAE--------------------------  670 (911)
Q Consensus       636 ~~~~~~~~---------------~~l~~~I----~sl~~~d~~g~t~L~~a~~~--------------------------  670 (911)
                      .... .+.               .+.+..+    ..+...+..|.+||+.+...                          
T Consensus       193 ~~~c-~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~  271 (672)
T PHA02730        193 SDRC-KNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQ  271 (672)
T ss_pred             CCcc-chhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccc
Confidence            0000 000               0000011    11222466788888742221                          


Q ss_pred             -------------------cCCChHH--------------------------------------------HHHHHHHHHH
Q 002539          671 -------------------EKFSSEE--------------------------------------------VKEKLVQKLL  687 (911)
Q Consensus       671 -------------------~~~~~~~--------------------------------------------~~~~ll~~a~  687 (911)
                                         .+++..-                                            ....+|+..+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~  351 (672)
T PHA02730        272 PYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYL  351 (672)
T ss_pred             hhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHH
Confidence                               1111100                                            0011333333


Q ss_pred             HHh--hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCC----HhHHHhHHhcCC--CccccCCCCCcHHHH---HHHc
Q 002539          688 KEK--LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGV--NINFRDVNGWTALHW---AAYC  756 (911)
Q Consensus       688 k~~--l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~----~eiVklLLe~GA--dvN~~D~~G~TPLH~---Aa~~  756 (911)
                      ...  ....++++|+++||++|.. ..|.||||+|+..++    .+++++||++|+  ++|.+|..|+||||.   |+..
T Consensus       352 ~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~  430 (672)
T PHA02730        352 HYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFN  430 (672)
T ss_pred             hcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhc
Confidence            333  4455899999999999985 799999999999885    899999999998  699999999999994   3333


Q ss_pred             C---------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCC-CCCcH
Q 002539          757 G---------RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK-DGDVA  826 (911)
Q Consensus       757 G---------~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~-~G~Ta  826 (911)
                      +         ..++|++|+++||++|+      +|..|+||||+|+..++.+++++|+++|     ++++.+|. .|.||
T Consensus       431 n~~~~~~e~~~~~ivk~LIs~GADINa------kD~~G~TPLh~Aa~~~~~eive~LI~~G-----AdIN~~d~~~g~Ta  499 (672)
T PHA02730        431 NCGYHCYETILIDVFDILSKYMDDIDM------IDNENKTLLYYAVDVNNIQFARRLLEYG-----ASVNTTSRSIINTA  499 (672)
T ss_pred             cccccccchhHHHHHHHHHhcccchhc------cCCCCCCHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCcCCcCH
Confidence            2         23579999999999988      8999999999999999999999999888     78999997 58988


Q ss_pred             hhh-------cHHHHHHhhhcCCCCC
Q 002539          827 EVT-------GATAVQTVPQRCPTPV  845 (911)
Q Consensus       827 ~~~-------~~~~V~~Lle~ga~~~  845 (911)
                      ...       ..++++.|+++|++..
T Consensus       500 L~~Aa~~~~~~~eIv~~LLs~ga~i~  525 (672)
T PHA02730        500 IQKSSYRRENKTKLVDLLLSYHPTLE  525 (672)
T ss_pred             HHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence            433       3569999999998743

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.4e-28  Score=286.14  Aligned_cols=220  Identities=19%  Similarity=0.198  Sum_probs=196.2

Q ss_pred             cccchHHHH-----HHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHH--HcCCCcchHHHHHHHHhCCCCccccCC
Q 002539          536 QQEAENCKW-----SCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTC--SNRLSCSEVREFEYRASHIPDVDVADN  608 (911)
Q Consensus       536 ~~~~T~LH~-----Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa--~nG~a~seVv~felLl~~GAdin~~D~  608 (911)
                      ..+.||||+     |+..|+.+++++|++.|++++  ..+..|.||||+|+  ..|+    ..++++|++.|++++..+.
T Consensus        66 ~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~--~~d~~g~tpL~~A~~~~~~~----~~iv~~Ll~~g~~~~~~~~  139 (480)
T PHA03100         66 KNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN--APDNNGITPLLYAISKKSNS----YSIVEYLLDNGANVNIKNS  139 (480)
T ss_pred             ccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCC--CCCCCCCchhhHHHhcccCh----HHHHHHHHHcCCCCCccCC
Confidence            346789999     999999999999999999975  67788999999999  7775    4445899999999999999


Q ss_pred             CCChHHHh----h--HHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHH
Q 002539          609 CGDITSEN----L--RMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEK  681 (911)
Q Consensus       609 ~G~TpL~~----~--~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~  681 (911)
                      .|.||||.    +  +.+++++|+ .|++++..                      +..+.+||+.|+..+...       
T Consensus       140 ~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~----------------------d~~g~tpL~~A~~~~~~~-------  190 (480)
T PHA03100        140 DGENLLHLYLESNKIDLKILKLLIDKGVDINAK----------------------NRYGYTPLHIAVEKGNID-------  190 (480)
T ss_pred             CCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc----------------------cCCCCCHHHHHHHhCCHH-------
Confidence            99999975    5  788999887 55554332                      247889999888765432       


Q ss_pred             HHHHHHHHhhHHHHHHHHHhCCCCCCcccCCC------CcHHHHHHHcCC--HhHHHhHHhcCCCccccCCCCCcHHHHH
Q 002539          682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCG------QGVLHFAAALGY--DWALEPTTVAGVNINFRDVNGWTALHWA  753 (911)
Q Consensus       682 ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G------~TpLH~AA~~G~--~eiVklLLe~GAdvN~~D~~G~TPLH~A  753 (911)
                                   ++++|+++|++++..+..|      .||||+|+..|+  .++|++|+++|+++|.+|..|+||||+|
T Consensus       191 -------------iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A  257 (480)
T PHA03100        191 -------------VIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYA  257 (480)
T ss_pred             -------------HHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence                         7889999999999999999      999999999999  9999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 002539          754 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       754 a~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~  809 (911)
                      +..|+.++|++|+++|||++.      +|..|.||||+|+..++.+++++|+++|+
T Consensus       258 ~~~~~~~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        258 VYNNNPEFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             HHcCCHHHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence            999999999999999999887      88999999999999999999999999984

>PHA02791 ankyrin-like protein; Provisional

Probab=99.96  E-value=3e-28  Score=266.03  Aligned_cols=210  Identities=10%  Similarity=0.042  Sum_probs=178.8

Q ss_pred             HcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHhhHHHHHHHHh
Q 002539          547 MFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLC  626 (911)
Q Consensus       547 ~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~~~~~ivkLLl  626 (911)
                      ..+..+++++|++.|++    ..|..|+||||+||..|+  .+++  ++|+..|++++..+  |.||||           
T Consensus         8 ~~~~~~~~~~Lis~~a~----~~D~~G~TpLh~Aa~~g~--~eiv--~~Ll~~ga~~n~~d--~~TpLh-----------   66 (284)
T PHA02791          8 TWKSKQLKSFLSSKDAF----KADVHGHSALYYAIADNN--VRLV--CTLLNAGALKNLLE--NEFPLH-----------   66 (284)
T ss_pred             ccCHHHHHHHHHhCCCC----CCCCCCCcHHHHHHHcCC--HHHH--HHHHHCcCCCcCCC--CCCHHH-----------
Confidence            35788999999999985    457789999999999985  4554  78999999887653  466665           


Q ss_pred             cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCC
Q 002539          627 LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP  706 (911)
Q Consensus       627 ~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~  706 (911)
                                                             .++..+..                    .++++|++.|+++
T Consensus        67 ---------------------------------------~Aa~~g~~--------------------eiV~lLL~~Gadv   87 (284)
T PHA02791         67 ---------------------------------------QAATLEDT--------------------KIVKILLFSGMDD   87 (284)
T ss_pred             ---------------------------------------HHHHCCCH--------------------HHHHHHHHCCCCC
Confidence                                                   23222221                    1678888999999


Q ss_pred             CcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCC-cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CC
Q 002539          707 CVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PS  784 (911)
Q Consensus       707 n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~-TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D-~~  784 (911)
                      +.+|..|+||||+||..|+.++|++|+++|++++.++..|+ ||||+||..|+.++|++||++|++.        .| ..
T Consensus        88 n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--------~d~~~  159 (284)
T PHA02791         88 SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--------FDLAI  159 (284)
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--------ccccc
Confidence            99999999999999999999999999999999999999996 8999999999999999999998653        22 35


Q ss_pred             CCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH------hhhcHHHHHHhhhcCCCCCCCCC
Q 002539          785 GRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA------EVTGATAVQTVPQRCPTPVSDGD  849 (911)
Q Consensus       785 G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta------~~~~~~~V~~Lle~ga~~~~~~~  849 (911)
                      |.||||+|+.+|+.+++++|+++|     ++++.+|..|.+|      ..+..++|+.|+++|++++..+.
T Consensus       160 g~TpLh~Aa~~g~~eiv~lLL~~g-----Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~  225 (284)
T PHA02791        160 LLSCIHITIKNGHVDMMILLLDYM-----TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL  225 (284)
T ss_pred             CccHHHHHHHcCCHHHHHHHHHCC-----CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence            899999999999999999999988     6899999988865      66778999999999999987665

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.96  E-value=1e-27  Score=288.35  Aligned_cols=287  Identities=15%  Similarity=0.006  Sum_probs=199.8

Q ss_pred             cCCcHHHHHHHHCC-CCCCCCCC-CCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----h--HH
Q 002539          548 FGEIEVPAEIVAGG-VLRCHTSS-QKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----L--RM  619 (911)
Q Consensus       548 ~G~~eVV~~LL~~G-advn~~~~-d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----~--~~  619 (911)
                      .++.++|++|++.| +++|  .. +..|.||||+|+.++.  ....++++|++.|+++|.+|..|.||||.    +  ..
T Consensus       152 ~v~leiVk~LLe~G~ADIN--~~~d~~G~TpLH~A~~n~~--~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~  227 (764)
T PHA02716        152 GIDLDLIKYMVDVGIVNLN--YVCKKTGYGILHAYLGNMY--VDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCA  227 (764)
T ss_pred             CCCHHHHHHHHHCCCCCcc--cccCCCCCcHHHHHHHhcc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCH
Confidence            48999999999999 9977  44 6779999999886643  23445589999999999999999999985    3  35


Q ss_pred             HHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHH
Q 002539          620 QFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK  698 (911)
Q Consensus       620 ~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~l  698 (911)
                      +++++|+ .|++++.++. .+.+++...+.   .....+.+....++.....+........-..+..+++.+ ...+++.
T Consensus       228 eIVklLLe~GADVN~kD~-~G~TPLh~Ai~---~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g-~leiVkl  302 (764)
T PHA02716        228 SVIKKIIELGGDMDMKCV-NGMSPIMTYII---NIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNI-DISVVYS  302 (764)
T ss_pred             HHHHHHHHcCCCCCCCCC-CCCCHHHHHHH---hhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcC-CHHHHHH
Confidence            7888877 6777765432 22222221110   000000000111111111111100000000111122222 2348899


Q ss_pred             HHhCCCCCCcccCCCCcHHHHHHH--cCCHhHHHhHHhcCCCccccCCCCCcHHHHHHH--------------cCCHHHH
Q 002539          699 AAEGGKGPCVLDHCGQGVLHFAAA--LGYDWALEPTTVAGVNINFRDVNGWTALHWAAY--------------CGRERTV  762 (911)
Q Consensus       699 Lle~Gad~n~~D~~G~TpLH~AA~--~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~--------------~G~~eiV  762 (911)
                      |++.|+++|.+|..|+||||+|+.  .++.++|++|+++|+++|.+|..|+||||+|+.              .|+.++|
T Consensus       303 LLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVV  382 (764)
T PHA02716        303 FLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI  382 (764)
T ss_pred             HHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHH
Confidence            999999999999999999999875  467899999999999999999999999999875              3789999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCCCCCCHHHH----HHHcCcHHHHHHHHHcCCCC---------------------------
Q 002539          763 ASLIALGAAPGALSDPTPKYPSGRTPADL----ASSIGHKGIAGYLAESDLSS---------------------------  811 (911)
Q Consensus       763 klLL~~GAd~na~tDpn~~D~~G~TPLhl----Aa~~G~~eIvklLLe~G~~s---------------------------  811 (911)
                      ++||++||+++.      +|..|+||||.    |...++.+++++|++.|+..                           
T Consensus       383 klLL~~GADIn~------kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~  456 (764)
T PHA02716        383 QCLISLGADITA------VNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAK  456 (764)
T ss_pred             HHHHHCCCCCCC------cCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHh
Confidence            999999999988      88999999994    23357899999999875310                           


Q ss_pred             -----------------------------ccccCcccCCCCCcHhhhc-----H-----HHHHHhhhcCCCCCCCCC
Q 002539          812 -----------------------------ALSAISLNKKDGDVAEVTG-----A-----TAVQTVPQRCPTPVSDGD  849 (911)
Q Consensus       812 -----------------------------h~adln~~D~~G~Ta~~~~-----~-----~~V~~Lle~ga~~~~~~~  849 (911)
                                                   ...++++.|..|+||...+     .     ++++.|++.|++++..+.
T Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~  533 (764)
T PHA02716        457 YNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTK  533 (764)
T ss_pred             cCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCC
Confidence                                         0123466688899994322     2     456999999999987554

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=1.5e-27  Score=276.43  Aligned_cols=292  Identities=17%  Similarity=0.096  Sum_probs=210.9

Q ss_pred             CcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHH
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS  614 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL  614 (911)
                      +..+.||||||+.....+.++.|++.|++..  ..+..+.+|||+|+..+.    ...+.+|+.+|+|+|..|..|.|||
T Consensus        85 D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~--~~n~~~~aplh~A~~~~~----~s~L~~Ll~~~~dvnl~de~~~TpL  158 (929)
T KOG0510|consen   85 DSADNTPLHAAVEYNQGDKIQVLLSYGADTP--LRNLNKNAPLHLAADSGN----YSCLKLLLDYGADVNLEDENGFTPL  158 (929)
T ss_pred             hcccCchhHHHhhcchHHHHHHHHhcCCCCC--hhhhhccCchhhccccch----HHHHHHHHHhcCCccccccCCCchh
Confidence            3456789999999999999999999999855  667779999999998763    4445788999999999999999999


Q ss_pred             Hh----hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHH-----------------HHHhhhccCCcchhHHHHHHhhcCC
Q 002539          615 EN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNS-----------------KISSLLKDENDDWDLMLKLTAEEKF  673 (911)
Q Consensus       615 ~~----~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~-----------------~I~sl~~~d~~g~t~L~~a~~~~~~  673 (911)
                      |+    ++.+..++|+.......+.+..+..++.+...                 +...+...+.++.+||+.+...+++
T Consensus       159 h~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~  238 (929)
T KOG0510|consen  159 HLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDI  238 (929)
T ss_pred             hHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCH
Confidence            75    66777788876555555555444444322211                 1111222345666777777665554


Q ss_pred             ChHHHHHHHHHHHHHHhhHH---HHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHH
Q 002539          674 SSEEVKEKLVQKLLKEKLQV---WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTAL  750 (911)
Q Consensus       674 ~~~~~~~~ll~~a~k~~l~~---~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPL  750 (911)
                      ..   ...++..-.+....+   ...++     --+|..|.+|.||||+||..|+.+.|..|+..|++++.++.++.|||
T Consensus       239 e~---lk~~L~n~~~~a~~~~~~~~q~k-----elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spL  310 (929)
T KOG0510|consen  239 EM---LKMCLQNGKKIADVQLDAMQQEK-----ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPL  310 (929)
T ss_pred             HH---HHHHHhCccccchhhhHHHHHHH-----HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCch
Confidence            32   111111100000000   00111     11456789999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH----
Q 002539          751 HWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA----  826 (911)
Q Consensus       751 H~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta----  826 (911)
                      |.||.+|+..+|+-||+ --+.-.   .|..|-.|.||||+|++.||..++++|+++|+.-+-  ..-.|.+|.||    
T Consensus       311 H~AA~yg~~ntv~rLL~-~~~~rl---lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~--~~e~D~dg~TaLH~A  384 (929)
T KOG0510|consen  311 HFAAIYGRINTVERLLQ-ESDTRL---LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN--MSEADSDGNTALHLA  384 (929)
T ss_pred             HHHHHcccHHHHHHHHh-CcCccc---cccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc--ccccccCCchhhhHH
Confidence            99999999999999999 222222   344889999999999999999999999999954210  01348899877    


Q ss_pred             -hhhcHHHHHHhhhcCCCCCC
Q 002539          827 -EVTGATAVQTVPQRCPTPVS  846 (911)
Q Consensus       827 -~~~~~~~V~~Lle~ga~~~~  846 (911)
                       ..+...+|+.|+.+||+...
T Consensus       385 a~~g~~~av~~Li~~Ga~I~~  405 (929)
T KOG0510|consen  385 AKYGNTSAVQKLISHGADIGV  405 (929)
T ss_pred             HHhccHHHHHHHHHcCCceee
Confidence             67778999999999999744

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.95  E-value=3.5e-27  Score=272.16  Aligned_cols=249  Identities=16%  Similarity=0.089  Sum_probs=204.2

Q ss_pred             cccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHh-----------------
Q 002539          536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRAS-----------------  598 (911)
Q Consensus       536 ~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~-----------------  598 (911)
                      ..+.||||+||..|+.++|++|++.|++++  ..+..|.||||+|+..|+  .+++  ++|++                 
T Consensus        33 ~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n--~~~~~~~t~L~~A~~~~~--~~iv--~~Ll~~g~~~~~~~~~~~~~~~  106 (434)
T PHA02874         33 DETTTPLIDAIRSGDAKIVELFIKHGADIN--HINTKIPHPLLTAIKIGA--HDII--KLLIDNGVDTSILPIPCIEKDM  106 (434)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcCC--HHHH--HHHHHCCCCCCcchhccCCHHH
Confidence            456799999999999999999999999977  566779999999999986  3443  55554                 


Q ss_pred             ------CCCCccccCCCCChHHHh----hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHH
Q 002539          599 ------HIPDVDVADNCGDITSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKL  667 (911)
Q Consensus       599 ------~GAdin~~D~~G~TpL~~----~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a  667 (911)
                            .|++++.+|..|.||||.    ++.+++++|+ .|++++..                      +..+.++|+.+
T Consensus       107 i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~----------------------d~~g~tpLh~A  164 (434)
T PHA02874        107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE----------------------DDNGCYPIHIA  164 (434)
T ss_pred             HHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCc----------------------CCCCCCHHHHH
Confidence                  456677888999999975    7788888887 45554332                      25678899888


Q ss_pred             HhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCC
Q 002539          668 TAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW  747 (911)
Q Consensus       668 ~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~  747 (911)
                      +..+...                    +++.|++.|++++..|..|.||||+|+..|+.++|++|++.|++++.++..|+
T Consensus       165 ~~~~~~~--------------------iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~  224 (434)
T PHA02874        165 IKHNFFD--------------------IIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGF  224 (434)
T ss_pred             HHCCcHH--------------------HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCC
Confidence            7654432                    78889999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-cHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          748 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG-HKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       748 TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G-~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                      ||||+|+..++ +++++|+ .|++++.      +|..|+||||+|+..+ +.+++++|+++|+.....     |..|.||
T Consensus       225 TpL~~A~~~~~-~~i~~Ll-~~~~in~------~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~-----d~~g~Tp  291 (434)
T PHA02874        225 TPLHNAIIHNR-SAIELLI-NNASIND------QDIDGSTPLHHAINPPCDIDIIDILLYHKADISIK-----DNKGENP  291 (434)
T ss_pred             CHHHHHHHCCh-HHHHHHH-cCCCCCC------cCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC-----CCCCCCH
Confidence            99999999876 5666666 6888776      8899999999999876 889999999999988874     5678888


Q ss_pred             hhh------cHHHHHHhhhcCCCCC
Q 002539          827 EVT------GATAVQTVPQRCPTPV  845 (911)
Q Consensus       827 ~~~------~~~~V~~Lle~ga~~~  845 (911)
                      ...      ...+++.|+..+....
T Consensus       292 L~~A~~~~~~~~~ik~ll~~~~~~~  316 (434)
T PHA02874        292 IDTAFKYINKDPVIKDIIANAVLIK  316 (434)
T ss_pred             HHHHHHhCCccHHHHHHHHhcCchh
Confidence            322      3467889998887544

>PHA02798 ankyrin-like protein; Provisional

Probab=99.95  E-value=4.1e-27  Score=275.78  Aligned_cols=229  Identities=12%  Similarity=0.053  Sum_probs=185.8

Q ss_pred             CcccchHHHHHHHc-----CCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCC
Q 002539          535 SQQEAENCKWSCMF-----GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC  609 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~-----G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~  609 (911)
                      +..+.||||+|+..     +..+++++|++.|+++|  ..+..|+||||+|+.++.. .....+++|+++|++++.+|..
T Consensus        68 d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN--~~d~~G~TpLh~a~~~~~~-~~~~iv~~Ll~~Gadvn~~d~~  144 (489)
T PHA02798         68 DNEYSTPLCTILSNIKDYKHMLDIVKILIENGADIN--KKNSDGETPLYCLLSNGYI-NNLEILLFMIENGADTTLLDKD  144 (489)
T ss_pred             CCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC--CCCCCcCcHHHHHHHcCCc-ChHHHHHHHHHcCCCccccCCC
Confidence            34678999998864     77899999999999987  6667799999999998742 3455568999999999999999


Q ss_pred             CChHHHh----hH---HHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHH
Q 002539          610 GDITSEN----LR---MQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEK  681 (911)
Q Consensus       610 G~TpL~~----~~---~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~  681 (911)
                      |.||||.    ++   .+++++|+ .|++++....                     ..+.++++.++..+- .       
T Consensus       145 g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~---------------------~~~~t~Lh~~~~~~~-~-------  195 (489)
T PHA02798        145 GFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN---------------------KEKYDTLHCYFKYNI-D-------  195 (489)
T ss_pred             CCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC---------------------cCCCcHHHHHHHhcc-c-------
Confidence            9999974    44   78888887 5555543221                     456677776544221 0       


Q ss_pred             HHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHH-------HHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHH
Q 002539          682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLH-------FAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA  754 (911)
Q Consensus       682 ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH-------~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa  754 (911)
                              .....+++.|+++|++++..+..|.|+++       ++...+...++.+|+. |+|+|.+|..|+||||+||
T Consensus       196 --------~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~  266 (489)
T PHA02798        196 --------RIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSV  266 (489)
T ss_pred             --------cCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHH
Confidence                    01122788999999999999999999987       2344567888888765 6999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 002539          755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       755 ~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~  810 (911)
                      ..|+.++|++||+.|||+++      +|..|+||||+|+.+|+.++++.|+++++.
T Consensus       267 ~~~~~~~v~~LL~~GAdin~------~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~  316 (489)
T PHA02798        267 SHNNRKIFEYLLQLGGDINI------ITELGNTCLFTAFENESKFIFNSILNKKPN  316 (489)
T ss_pred             HcCcHHHHHHHHHcCCcccc------cCCCCCcHHHHHHHcCcHHHHHHHHccCCC
Confidence            99999999999999999988      889999999999999999999999998853

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.95  E-value=5.7e-27  Score=274.95  Aligned_cols=225  Identities=13%  Similarity=-0.011  Sum_probs=183.7

Q ss_pred             cchHHHHHHHcC------CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCc-cccCCCC
Q 002539          538 EAENCKWSCMFG------EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDV-DVADNCG  610 (911)
Q Consensus       538 ~~T~LH~Ac~~G------~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdi-n~~D~~G  610 (911)
                      +.||||+|+..+      ..+++++||+.|+++|  ..+..|.||||+|+.++. ...+.++++|+++|+++ +.+|..|
T Consensus        69 ~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin--~~d~~g~tpL~~a~~~~~-~~~~eiv~~Ll~~Gadin~~~d~~g  145 (494)
T PHA02989         69 IETPLCAVLRNREITSNKIKKIVKLLLKFGADIN--LKTFNGVSPIVCFIYNSN-INNCDMLRFLLSKGINVNDVKNSRG  145 (494)
T ss_pred             CCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC--CCCCCCCcHHHHHHHhcc-cCcHHHHHHHHHCCCCcccccCCCC
Confidence            368999998765      4689999999999987  667779999999987653 12345558999999999 8999999


Q ss_pred             ChHHHh------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHH
Q 002539          611 DITSEN------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLV  683 (911)
Q Consensus       611 ~TpL~~------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll  683 (911)
                      .||||.      ++.+++++|+ .|++++...                     +..+.+||+.++..+..          
T Consensus       146 ~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~---------------------~~~g~tpL~~a~~~~~~----------  194 (494)
T PHA02989        146 YNLLHMYLESFSVKKDVIKILLSFGVNLFEKT---------------------SLYGLTPMNIYLRNDID----------  194 (494)
T ss_pred             CCHHHHHHHhccCCHHHHHHHHHcCCCccccc---------------------cccCCChHHHHHhcccc----------
Confidence            999975      3678899887 666554321                     24677888776542210          


Q ss_pred             HHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcC------CHhHHHhHHhcCCCccccCCCCCcHHHHHHHcC
Q 002539          684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG------YDWALEPTTVAGVNINFRDVNGWTALHWAAYCG  757 (911)
Q Consensus       684 ~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G------~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G  757 (911)
                            .....++++|++.|+++|.+|..|.|+||.++..+      ..+++++|+ .|+++|.+|..|+||||+||..|
T Consensus       195 ------~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~advn~~d~~G~TpL~~Aa~~~  267 (494)
T PHA02989        195 ------VISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KYIKINKKDKKGFNPLLISAKVD  267 (494)
T ss_pred             ------cccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hCCCCCCCCCCCCCHHHHHHHhc
Confidence                  01122789999999999999999999999877654      467777665 47999999999999999999999


Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 002539          758 RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       758 ~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~  809 (911)
                      +.++|++||++|||+++      +|..|+||||+|+..|+.+++++|++.+.
T Consensus       268 ~~~~v~~LL~~Gadin~------~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        268 NYEAFNYLLKLGDDIYN------VSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            99999999999999988      88999999999999999999999998874

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=2.8e-27  Score=274.16  Aligned_cols=254  Identities=19%  Similarity=0.182  Sum_probs=203.3

Q ss_pred             ccCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHh-----CCCCccccC
Q 002539          533 LMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRAS-----HIPDVDVAD  607 (911)
Q Consensus       533 l~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~-----~GAdin~~D  607 (911)
                      +.+..+.||||+||..++.|+.++|++.|+++|  ..+..|.+|+|.|+..|.  .+..  |..+.     .+..+|.-+
T Consensus       149 l~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~--K~~~~~~~~iH~aa~s~s--~e~m--Ei~l~~~g~~r~~~in~~~  222 (929)
T KOG0510|consen  149 LEDENGFTPLHLAARKNKVEAKKELINKGADPC--KSDIDGNFPIHEAARSGS--KECM--EIFLPEHGYERQTHINFDN  222 (929)
T ss_pred             ccccCCCchhhHHHhcChHHHHHHHHhcCCCCC--cccCcCCchHHHHHHhcc--hhhh--hhhhccccchhhccccccc
Confidence            344556889999999999998889999999866  777789999999998884  4444  44444     667888888


Q ss_pred             CCCChHHHh----hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHh-hhccCCcchhHHHHHHhhcCCChHHHHHHH
Q 002539          608 NCGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISS-LLKDENDDWDLMLKLTAEEKFSSEEVKEKL  682 (911)
Q Consensus       608 ~~G~TpL~~----~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~s-l~~~d~~g~t~L~~a~~~~~~~~~~~~~~l  682 (911)
                      ..|.||||.    ++.+.+++++..........    .+   ....... +...|.++.+|||.++..|+..        
T Consensus       223 n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~----~~---~~~q~kelv~~~d~dg~tpLH~a~r~G~~~--------  287 (929)
T KOG0510|consen  223 NEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQ----LD---AMQQEKELVNDEDNDGCTPLHYAARQGGPE--------  287 (929)
T ss_pred             CCCCcchhhhhhcCCHHHHHHHHhCccccchhh----hH---HHHHHHHHhhcccccCCchHHHHHHcCChh--------
Confidence            899999975    77787777664332221110    00   1122222 2345788999999999888765        


Q ss_pred             HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHh-cC-CCccccCCCCCcHHHHHHHcCCHH
Q 002539          683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AG-VNINFRDVNGWTALHWAAYCGRER  760 (911)
Q Consensus       683 l~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe-~G-AdvN~~D~~G~TPLH~Aa~~G~~e  760 (911)
                                  .+..|+..|++++.++.++.||||.||..|+.++|+.||+ .| ..+|..|-.|+||||+|+..||.+
T Consensus       288 ------------svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~  355 (929)
T KOG0510|consen  288 ------------SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDR  355 (929)
T ss_pred             ------------HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHH
Confidence                        6778999999999999999999999999999999999999 55 568999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHh
Q 002539          761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE  827 (911)
Q Consensus       761 iVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~  827 (911)
                      +|++||+.||+.....   ..|.+|.||||+|++.|+..+|++|+.+|     +++..+|+.|.++.
T Consensus       356 v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~G-----a~I~~~n~~g~SA~  414 (929)
T KOG0510|consen  356 VVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHG-----ADIGVKNKKGKSAF  414 (929)
T ss_pred             HHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcC-----Cceeeccccccccc
Confidence            9999999999986311   25899999999999999999999999777     78999999998773

>PHA02798 ankyrin-like protein; Provisional

Probab=99.95  E-value=1.8e-26  Score=270.40  Aligned_cols=255  Identities=11%  Similarity=0.020  Sum_probs=206.1

Q ss_pred             cchHHHHH--HHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCC-cchHHHHHHHHhCCCCccccCCCCChHH
Q 002539          538 EAENCKWS--CMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLS-CSEVREFEYRASHIPDVDVADNCGDITS  614 (911)
Q Consensus       538 ~~T~LH~A--c~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a-~seVv~felLl~~GAdin~~D~~G~TpL  614 (911)
                      +.|+++.+  +..++.++|++|+++|++++  ..+..|.||||+|+.+... ...+.++++|+++|+++|.+|..|.|||
T Consensus        36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn--~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpL  113 (489)
T PHA02798         36 EYSIFQKYLQRDSPSTDIVKLFINLGANVN--GLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPL  113 (489)
T ss_pred             cchHHHHHHhCCCCCHHHHHHHHHCCCCCC--CCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHH
Confidence            34555533  44557899999999999987  6678899999999875100 0124455899999999999999999999


Q ss_pred             Hh-------hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHH
Q 002539          615 EN-------LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKL  686 (911)
Q Consensus       615 ~~-------~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a  686 (911)
                      |.       .+.+++++|+ .|++++..                      +..+++||+.++..+...            
T Consensus       114 h~a~~~~~~~~~~iv~~Ll~~Gadvn~~----------------------d~~g~tpL~~a~~~~~~~------------  159 (489)
T PHA02798        114 YCLLSNGYINNLEILLFMIENGADTTLL----------------------DKDGFTMLQVYLQSNHHI------------  159 (489)
T ss_pred             HHHHHcCCcChHHHHHHHHHcCCCcccc----------------------CCCCCcHHHHHHHcCCcc------------
Confidence            85       2578888877 56666443                      257889999887754410            


Q ss_pred             HHHhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHc----CCHhHHHhHHhcCCCccccCCCCCcHHH-------HHH
Q 002539          687 LKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAAL----GYDWALEPTTVAGVNINFRDVNGWTALH-------WAA  754 (911)
Q Consensus       687 ~k~~l~~~Lv~lLle~Gad~n~~D-~~G~TpLH~AA~~----G~~eiVklLLe~GAdvN~~D~~G~TPLH-------~Aa  754 (911)
                           ...++++|++.|++++.++ ..|.||||.++..    ++.+++++|+++|++++..|..|.|+++       ++.
T Consensus       160 -----~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~  234 (489)
T PHA02798        160 -----DIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDN  234 (489)
T ss_pred             -----hHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhc
Confidence                 1127889999999999885 5799999998765    4799999999999999999999999987       345


Q ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhh
Q 002539          755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVT  829 (911)
Q Consensus       755 ~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~  829 (911)
                      ..+..+++.+|+. |+|+|.      +|..|+||||+|+..|+.+++++|++.|     ++++.+|..|.||     ..+
T Consensus       235 ~~~~~~i~~~l~~-~~dvN~------~d~~G~TPL~~A~~~~~~~~v~~LL~~G-----Adin~~d~~G~TpL~~A~~~~  302 (489)
T PHA02798        235 KRFKKNILDFIFS-YIDINQ------VDELGFNPLYYSVSHNNRKIFEYLLQLG-----GDINIITELGNTCLFTAFENE  302 (489)
T ss_pred             ccchHHHHHHHHh-cCCCCC------cCcCCccHHHHHHHcCcHHHHHHHHHcC-----CcccccCCCCCcHHHHHHHcC
Confidence            5678889988776 688877      8899999999999999999999999988     7999999999999     444


Q ss_pred             cHHHHHHhhhcCCCCC
Q 002539          830 GATAVQTVPQRCPTPV  845 (911)
Q Consensus       830 ~~~~V~~Lle~ga~~~  845 (911)
                      ..++++.|++.+++++
T Consensus       303 ~~~iv~~lL~~~~~~~  318 (489)
T PHA02798        303 SKFIFNSILNKKPNKN  318 (489)
T ss_pred             cHHHHHHHHccCCCHH
Confidence            5589999999998876

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.4e-26  Score=263.08  Aligned_cols=218  Identities=18%  Similarity=0.078  Sum_probs=187.3

Q ss_pred             CChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----hHHHHHHHHhc-CCCCCCCCCCCCchhhhHHH
Q 002539          573 GRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLN  647 (911)
Q Consensus       573 G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----~~~~ivkLLl~-ga~v~~~~~~~~~~~~~~l~  647 (911)
                      .+++||.|+..|+  .++  +++|++.|+++|..+..|.||||.    ++.+++++|+. |+..+..             
T Consensus         2 ~~~~L~~A~~~g~--~~i--v~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-------------   64 (413)
T PHA02875          2 DQVALCDAILFGE--LDI--ARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK-------------   64 (413)
T ss_pred             CchHHHHHHHhCC--HHH--HHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-------------
Confidence            5799999999996  444  589999999999999999999975    78899999884 4433221             


Q ss_pred             HHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCC-CcccCCCCcHHHHHHHcCCH
Q 002539          648 SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP-CVLDHCGQGVLHFAAALGYD  726 (911)
Q Consensus       648 ~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~-n~~D~~G~TpLH~AA~~G~~  726 (911)
                               +..+.++|+.++..++..                    +++.|++.|+++ +..+..|.||||+|+..|+.
T Consensus        65 ---------~~~~~t~L~~A~~~g~~~--------------------~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~  115 (413)
T PHA02875         65 ---------YPDIESELHDAVEEGDVK--------------------AVEELLDLGKFADDVFYKDGMTPLHLATILKKL  115 (413)
T ss_pred             ---------CCCcccHHHHHHHCCCHH--------------------HHHHHHHcCCcccccccCCCCCHHHHHHHhCCH
Confidence                     145667888887766543                    678888888775 45577899999999999999


Q ss_pred             hHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002539          727 WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       727 eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe  806 (911)
                      +++++|+++|++++.++..|+||||+|+..|+.++|++|+++|++++.      +|..|.||||+|+..|+.+++++|++
T Consensus       116 ~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~  189 (413)
T PHA02875        116 DIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLD  189 (413)
T ss_pred             HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999887      88999999999999999999999999


Q ss_pred             cCCCCccccCcccCCCCC-cH-----hhhcHHHHHHhhhcCCCCCCC
Q 002539          807 SDLSSALSAISLNKKDGD-VA-----EVTGATAVQTVPQRCPTPVSD  847 (911)
Q Consensus       807 ~G~~sh~adln~~D~~G~-Ta-----~~~~~~~V~~Lle~ga~~~~~  847 (911)
                      +|     ++++..+..|. |+     ..+..++|+.|+++|++++..
T Consensus       190 ~g-----a~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~  231 (413)
T PHA02875        190 SG-----ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM  231 (413)
T ss_pred             CC-----CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence            88     68999988875 33     456779999999999998753

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.94  E-value=3.5e-26  Score=267.07  Aligned_cols=233  Identities=14%  Similarity=0.006  Sum_probs=186.0

Q ss_pred             CcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCC----C
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC----G  610 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~----G  610 (911)
                      +..+.||||+||..|+.+++++|++.+....  .  ..+.+||+.|+..++  .+++  ++|+..+.+.+.....    .
T Consensus        67 d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~--~--~~~~~~l~~a~~~~~--~ei~--~~Ll~~~~~~~~~~~~~~~~~  138 (477)
T PHA02878         67 DHRDLTPLHIICKEPNKLGMKEMIRSINKCS--V--FYTLVAIKDAFNNRN--VEIF--KIILTNRYKNIQTIDLVYIDK  138 (477)
T ss_pred             CCCCCCHHHHHHHCccHhHHHHHHHHHhccc--c--ccchhhHHHHHHcCC--HHHH--HHHHhCcccCcccCcHHHHhh
Confidence            4567899999999999999999999887643  2  458899999999985  4444  7787765433221000    0


Q ss_pred             ChHHHhhHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHH
Q 002539          611 DITSENLRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       611 ~TpL~~~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~  689 (911)
                      .........+++++|+ .|++++....                     ..++++|+.|+..+...               
T Consensus       139 ~~~~~~~~~~iv~~Ll~~gadin~~~~---------------------~~g~tpLh~A~~~~~~~---------------  182 (477)
T PHA02878        139 KSKDDIIEAEITKLLLSYGADINMKDR---------------------HKGNTALHYATENKDQR---------------  182 (477)
T ss_pred             ccchhhHHHHHHHHHHHcCCCCCccCC---------------------CCCCCHHHHHHhCCCHH---------------
Confidence            0000113445888877 6666544321                     23889999988765533               


Q ss_pred             hhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHc-CCHHHHHHHHHc
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC-GRERTVASLIAL  768 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~-G~~eiVklLL~~  768 (911)
                           ++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.. ++.++|++||++
T Consensus       183 -----iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~  257 (477)
T PHA02878        183 -----LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEH  257 (477)
T ss_pred             -----HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHc
Confidence                 78889999999999999999999999999999999999999999999999999999999975 799999999999


Q ss_pred             CCCCCCCCCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhhh
Q 002539          769 GAAPGALSDPTPKYP-SGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT  829 (911)
Q Consensus       769 GAd~na~tDpn~~D~-~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~~  829 (911)
                      |++++.      ++. .|.||||+|  .++.+++++|+++|     +++++.|..|.||...
T Consensus       258 gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~g-----adin~~d~~g~TpL~~  306 (477)
T PHA02878        258 GVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYG-----ADINSLNSYKLTPLSS  306 (477)
T ss_pred             CCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCC-----CCCCCcCCCCCCHHHH
Confidence            999988      554 799999999  57889999999988     7899999999999433

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.94  E-value=8.7e-27  Score=266.48  Aligned_cols=203  Identities=25%  Similarity=0.307  Sum_probs=177.3

Q ss_pred             chHHHHHHHcCCcHHHHHHHHC-CCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccC-CCCChHHHh
Q 002539          539 AENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD-NCGDITSEN  616 (911)
Q Consensus       539 ~T~LH~Ac~~G~~eVV~~LL~~-Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D-~~G~TpL~~  616 (911)
                      +.....||..|+++.|+.|++. |.+++  .+|..|.|+||+||.|+.  .+|+  +||+++||++|..+ .-+.     
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~--~~D~~g~tlLHWAAiNNr--l~v~--r~li~~gadvn~~gG~l~s-----  113 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVN--NPDREGVTLLHWAAINNR--LDVA--RYLISHGADVNAIGGVLGS-----  113 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCC--CCCcCCccceeHHHHcCc--HHHH--HHHHHcCCCccccCCCCCC-----
Confidence            4578899999999999999999 98866  777889999999999985  4555  89999999999874 2233     


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHH
Q 002539          617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV  696 (911)
Q Consensus       617 ~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv  696 (911)
                                                                   +|||.|+..+.+.                    ++
T Consensus       114 ---------------------------------------------tPLHWAar~G~~~--------------------vv  128 (600)
T KOG0509|consen  114 ---------------------------------------------TPLHWAARNGHIS--------------------VV  128 (600)
T ss_pred             ---------------------------------------------CcchHHHHcCcHH--------------------HH
Confidence                                                         4556666655543                    78


Q ss_pred             HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002539          697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS  776 (911)
Q Consensus       697 ~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~t  776 (911)
                      .+|+++||||+.+|.+|.||||+||..|+.-+|-+||.+|+++|.+|.+|+|||||||++|+...++.||+.|+.++.. 
T Consensus       129 ~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~-  207 (600)
T KOG0509|consen  129 DLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT-  207 (600)
T ss_pred             HHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc-
Confidence            8899999999999999999999999999999999999999999999999999999999999999999999999999883 


Q ss_pred             CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHh
Q 002539          777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE  827 (911)
Q Consensus       777 Dpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~  827 (911)
                          .|..|.||||+|+..|+..++.+|++.|     ++.+..|.+|.||.
T Consensus       208 ----d~~~g~TpLHwa~~~gN~~~v~Ll~~g~-----~~~d~~~~~g~tp~  249 (600)
T KOG0509|consen  208 ----DDNHGNTPLHWAVVGGNLTAVKLLLEGG-----ADLDKTNTNGKTPF  249 (600)
T ss_pred             ----ccccCCchHHHHHhcCCcceEehhhhcC-----CcccccccCCCCHH
Confidence                2389999999999999999999666655     68999999999984

>PHA02917 ankyrin-like protein; Provisional

Probab=99.93  E-value=2e-25  Score=268.98  Aligned_cols=234  Identities=14%  Similarity=0.030  Sum_probs=174.6

Q ss_pred             cHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----hH----HHHH
Q 002539          551 IEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LR----MQFG  622 (911)
Q Consensus       551 ~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----~~----~~iv  622 (911)
                      ++.|+.||.+|..++  ..|..|+||||+||.+++ +.....+++|++.|++++.++..|.||||.    ++    .+++
T Consensus        12 ~~~~~~l~~~~~~~~--~~d~~g~t~Lh~a~~~~~-~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~   88 (661)
T PHA02917         12 LDELKQMLRDRDPND--TRNQFKNNALHAYLFNEH-CNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIA   88 (661)
T ss_pred             HHHHHHHHhccCccc--ccCCCCCcHHHHHHHhhh-cCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHH
Confidence            467888998888765  667889999999877743 233444588999999999999999999984    44    3345


Q ss_pred             HHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHh
Q 002539          623 KLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAE  701 (911)
Q Consensus       623 kLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle  701 (911)
                      ++|+ .++..+..                        +....++.++..++                    ..++++|++
T Consensus        89 ~~Ll~~~~~~n~~------------------------~~~~~~~~a~~~~~--------------------~e~vk~Ll~  124 (661)
T PHA02917         89 MALLEATGYSNIN------------------------DFNIFSYMKSKNVD--------------------VDLIKVLVE  124 (661)
T ss_pred             HHHHhccCCCCCC------------------------CcchHHHHHhhcCC--------------------HHHHHHHHH
Confidence            5665 22322111                        01112222222222                    238899999


Q ss_pred             CCCCCCcccCCCCcHHHHHH--HcCCHhHHHhHHhcCCCccccCC---CC-----------CcHHHHHHH----------
Q 002539          702 GGKGPCVLDHCGQGVLHFAA--ALGYDWALEPTTVAGVNINFRDV---NG-----------WTALHWAAY----------  755 (911)
Q Consensus       702 ~Gad~n~~D~~G~TpLH~AA--~~G~~eiVklLLe~GAdvN~~D~---~G-----------~TPLH~Aa~----------  755 (911)
                      +|+++|.+|..|+||||+|+  ..|+.++|++||++||++|.+|.   .|           +||||+|+.          
T Consensus       125 ~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~  204 (661)
T PHA02917        125 HGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTR  204 (661)
T ss_pred             cCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhccccccccc
Confidence            99999999999999999654  57899999999999999987654   34           599999986          


Q ss_pred             -cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcH--HHHHHHHHcCCCCccccCc----ccCCCCCcH--
Q 002539          756 -CGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK--GIAGYLAESDLSSALSAIS----LNKKDGDVA--  826 (911)
Q Consensus       756 -~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~--eIvklLLe~G~~sh~adln----~~D~~G~Ta--  826 (911)
                       .++.++|++||++|||+|.      +|..|+||||+|+.+|+.  ++|++|++ |+     +++    ..|..|.++  
T Consensus       205 ~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~-----d~~~~~~~~~~~~~~~~~  272 (661)
T PHA02917        205 AYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-GI-----DNTAYSYIDDLTCCTRGI  272 (661)
T ss_pred             ccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CC-----cccccccccCcccccchH
Confidence             5689999999999999988      889999999999999985  79999985 63     333    445555542  


Q ss_pred             hhh------------cHHHHHHhhhcCCC
Q 002539          827 EVT------------GATAVQTVPQRCPT  843 (911)
Q Consensus       827 ~~~------------~~~~V~~Lle~ga~  843 (911)
                      ...            ..++|+.|++.|++
T Consensus       273 ~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~  301 (661)
T PHA02917        273 MADYLNSDYRYNKDVDLDLVKLFLENGKP  301 (661)
T ss_pred             HHHHHHhhccccccchHHHHHHHHhCCCC
Confidence            111            55899999999986

>PHA02917 ankyrin-like protein; Provisional

Probab=99.93  E-value=8.9e-25  Score=263.39  Aligned_cols=296  Identities=10%  Similarity=-0.024  Sum_probs=201.5

Q ss_pred             CcccchHHHHHH--HcCCcHHHHHHHHCCCCCCCCC-CCCCC-----------ChHHHHHHHcCC-------CcchHHHH
Q 002539          535 SQQEAENCKWSC--MFGEIEVPAEIVAGGVLRCHTS-SQKVG-----------RVPFYVTCSNRL-------SCSEVREF  593 (911)
Q Consensus       535 ~~~~~T~LH~Ac--~~G~~eVV~~LL~~Gadvn~~~-~d~~G-----------~TPLhvAa~nG~-------a~seVv~f  593 (911)
                      +..+.||||+|+  ..|+.+||++||++|++++... .+..|           .||||+|+..+.       ......++
T Consensus       133 d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv  212 (661)
T PHA02917        133 CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVV  212 (661)
T ss_pred             CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHH
Confidence            346799999654  5789999999999999987422 22334           599999986210       00123444


Q ss_pred             HHHHhCCCCccccCCCCChHHHh----hH--HHHHHHHhcCCCCCCCCCCCCchhh--hHHHH--------------HHH
Q 002539          594 EYRASHIPDVDVADNCGDITSEN----LR--MQFGKLLCLTSVSTPNYDPSNLSDI--SQLNS--------------KIS  651 (911)
Q Consensus       594 elLl~~GAdin~~D~~G~TpL~~----~~--~~ivkLLl~ga~v~~~~~~~~~~~~--~~l~~--------------~I~  651 (911)
                      ++|++.|+++|.+|.+|.||||.    ++  .+++++|+.|+++............  ..+..              .+.
T Consensus       213 ~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv  292 (661)
T PHA02917        213 KCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLV  292 (661)
T ss_pred             HHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCCcccccccccCcccccchHHHHHHHhhccccccchHHHH
Confidence            89999999999999999999986    44  4799999988776532111111100  01111              111


Q ss_pred             hhh-ccCC-cchhHHHHHHhhcCCCh------HHHHHHHHHH---HH-HHhhHHHHHHHHHhCCCCCCcccCCCCcHHHH
Q 002539          652 SLL-KDEN-DDWDLMLKLTAEEKFSS------EEVKEKLVQK---LL-KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHF  719 (911)
Q Consensus       652 sl~-~~d~-~g~t~L~~a~~~~~~~~------~~~~~~ll~~---a~-k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~  719 (911)
                      .++ .... .+..+++.....++...      ....+.+++.   ++ .......++++|++.|+++|.++..|.|+.  
T Consensus       293 ~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~--  370 (661)
T PHA02917        293 KLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRN--  370 (661)
T ss_pred             HHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchh--
Confidence            111 1100 00011111111111000      0001111121   11 122233488999999999999999999854  


Q ss_pred             HHHcCCHhHHHhHHh-cCCCccccCCCCCcHHHHHHHcC-----------------------CHHHHHHHHHcCCCCCCC
Q 002539          720 AAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCG-----------------------RERTVASLIALGAAPGAL  775 (911)
Q Consensus       720 AA~~G~~eiVklLLe-~GAdvN~~D~~G~TPLH~Aa~~G-----------------------~~eiVklLL~~GAd~na~  775 (911)
                        .....+++++||. .|++++.++.+|+||||.||+.+                       ..++|++|+++|||+|. 
T Consensus       371 --~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~-  447 (661)
T PHA02917        371 --INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINM-  447 (661)
T ss_pred             --hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCC-
Confidence              3567778888887 69998888888999999998543                       35688999999999988 


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh------hcHHHHHHhhhcCCCCC
Q 002539          776 SDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV------TGATAVQTVPQRCPTPV  845 (911)
Q Consensus       776 tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~------~~~~~V~~Lle~ga~~~  845 (911)
                           +|..|+||||+|+..++.+++++|+++|     ++++.+|..|.||..      ...++++.|+..++++.
T Consensus       448 -----kd~~G~TpLh~Aa~~~~~~~v~~Ll~~G-----Adin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        448 -----IDKRGETLLHKAVRYNKQSLVSLLLESG-----SDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             -----CCCCCcCHHHHHHHcCCHHHHHHHHHCc-----CCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence                 8899999999999999999999999888     789999999999832      34689999999998865

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=4.8e-26  Score=278.36  Aligned_cols=258  Identities=18%  Similarity=0.147  Sum_probs=176.1

Q ss_pred             cccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHH
Q 002539          536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE  615 (911)
Q Consensus       536 ~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~  615 (911)
                      .++.|++|+||..|.+++++.++..|++.|  ...+.|.||||+|+..++  ..++  +.+++.|++++.++..|.||+|
T Consensus       372 ~k~~~pl~la~~~g~~~~v~Lll~~ga~~~--~~gk~gvTplh~aa~~~~--~~~v--~l~l~~gA~~~~~~~lG~T~lh  445 (1143)
T KOG4177|consen  372 EKGFTPLHLAVKSGRVSVVELLLEAGADPN--SAGKNGVTPLHVAAHYGN--PRVV--KLLLKRGASPNAKAKLGYTPLH  445 (1143)
T ss_pred             ccCCcchhhhcccCchhHHHhhhhccCCcc--cCCCCCcceeeehhhccC--cceE--EEEeccCCChhhHhhcCCChhh
Confidence            456789999999999999999999999865  666679999999988875  3444  6778889999999999999987


Q ss_pred             h----h-HHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChH-------------
Q 002539          616 N----L-RMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSE-------------  676 (911)
Q Consensus       616 ~----~-~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~-------------  676 (911)
                      .    + +.+++.++. .+.+.+...                      ..++++|+.+...++.+..             
T Consensus       446 vaa~~g~~~~~~~~l~~~g~~~n~~s----------------------~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~  503 (1143)
T KOG4177|consen  446 VAAKKGRYLQIARLLLQYGADPNAVS----------------------KQGFTPLHLAAQEGHTEVVQLLLEGGANDNLD  503 (1143)
T ss_pred             hhhhcccHhhhhhhHhhcCCCcchhc----------------------cccCcchhhhhccCCchHHHHhhhcCCccCcc
Confidence            4    4 555565555 444443322                      2444444444443333210             


Q ss_pred             -HHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHH
Q 002539          677 -EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY  755 (911)
Q Consensus       677 -~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~  755 (911)
                       ......++.+.... ..-.++.++++|++++.++.+|.||||.||..|+..+|++||++|||++++|+.|+||||.||.
T Consensus       504 ~~~~l~~lhla~~~~-~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~  582 (1143)
T KOG4177|consen  504 AKKGLTPLHLAADED-TVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQ  582 (1143)
T ss_pred             chhccchhhhhhhhh-hHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHH
Confidence             11111122222222 2225666777777777777777888888888888888888888888888888778888888888


Q ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh
Q 002539          756 CGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV  828 (911)
Q Consensus       756 ~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~  828 (911)
                      .|+.+|+.+|+++||++|+      .|.+|.|||++|++.|+..++++|+..+.++...+....+..|.+|+.
T Consensus       583 ~G~~~i~~LLlk~GA~vna------~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~  649 (1143)
T KOG4177|consen  583 QGHNDIAELLLKHGASVNA------ADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPED  649 (1143)
T ss_pred             cChHHHHHHHHHcCCCCCc------ccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhh
Confidence            8888888888888887777      677778888888888888888887777754422224445556667643

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3e-26  Score=280.23  Aligned_cols=270  Identities=19%  Similarity=0.174  Sum_probs=207.8

Q ss_pred             cCCCCceEEEeeccccccCCCceEEEEEcccc--cCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHH
Q 002539          502 LSQDQLYSIIDFSPNWAYVSSEVKVLITGRFL--MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYV  579 (911)
Q Consensus       502 ~s~~q~fsI~dfSP~wa~s~~~tKVlI~G~fl--~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhv  579 (911)
                      .+.++.|+-..+.+..++......++..|.-.  ..+.++||||.|+..++..+|+.++..|++++  ..+..|.||+|+
T Consensus       369 ~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~--~~~~lG~T~lhv  446 (1143)
T KOG4177|consen  369 QAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPN--AKAKLGYTPLHV  446 (1143)
T ss_pred             cccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChh--hHhhcCCChhhh
Confidence            34566777777777777666555555556442  23457999999999999999999999999977  666779999999


Q ss_pred             HHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----hHHHHHHHHhcCCCCCCCCCCCCchhhhHH-----HHHH
Q 002539          580 TCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQL-----NSKI  650 (911)
Q Consensus       580 Aa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l-----~~~I  650 (911)
                      |+..|. ..++.  -.++..|+++|.....|.||||.    ++..++++|..+..........+...+...     ....
T Consensus       447 aa~~g~-~~~~~--~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~  523 (1143)
T KOG4177|consen  447 AAKKGR-YLQIA--RLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVA  523 (1143)
T ss_pred             hhhccc-Hhhhh--hhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHH
Confidence            998873 24444  47789999999999999998864    889999998866533222221221111110     0001


Q ss_pred             Hhhh-------ccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc
Q 002539          651 SSLL-------KDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL  723 (911)
Q Consensus       651 ~sl~-------~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~  723 (911)
                      ..++       ..+..+.++||.+...++++                    +|++|+++|++++.+++.|+||||.||..
T Consensus       524 ~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~--------------------~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~  583 (1143)
T KOG4177|consen  524 KILLEHGANVDLRTGRGYTPLHVAVHYGNVD--------------------LVKFLLEHGADVNAKDKLGYTPLHQAAQQ  583 (1143)
T ss_pred             HHHhhcCCceehhcccccchHHHHHhcCCch--------------------HHHHhhhCCccccccCCCCCChhhHHHHc
Confidence            1111       11345667777777766665                    89999999999999999999999999999


Q ss_pred             CCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCc
Q 002539          724 GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH  797 (911)
Q Consensus       724 G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~  797 (911)
                      |+.+++.+|+++||+||..|.+|.||||+|++.|+.+++++|+..|+++ ..+++...+..|.||..++...-.
T Consensus       584 G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~-~~~~~~~e~~~g~~p~~v~e~~~~  656 (1143)
T KOG4177|consen  584 GHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP-AATDPVKENRKGAVPEDVAEELDT  656 (1143)
T ss_pred             ChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCcc-ccccchhhhhcccChhhHHHHhhh
Confidence            9999999999999999999999999999999999999999999999997 445677789999999998876543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.93  E-value=1e-25  Score=257.84  Aligned_cols=180  Identities=21%  Similarity=0.265  Sum_probs=157.0

Q ss_pred             CcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHH
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS  614 (911)
Q Consensus       535 ~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL  614 (911)
                      +.++.|+|||||+++.++|+++||++|+++|...- .-|.||||+||++|+    +.++.+|+++|||++.+|.+|.+++
T Consensus        75 D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG-~l~stPLHWAar~G~----~~vv~lLlqhGAdpt~~D~~G~~~l  149 (600)
T KOG0509|consen   75 DREGVTLLHWAAINNRLDVARYLISHGADVNAIGG-VLGSTPLHWAARNGH----ISVVDLLLQHGADPTLKDKQGLTPL  149 (600)
T ss_pred             CcCCccceeHHHHcCcHHHHHHHHHcCCCccccCC-CCCCCcchHHHHcCc----HHHHHHHHHcCCCCceecCCCCcHH
Confidence            45789999999999999999999999999984443 568999999999997    5555899999999999999998887


Q ss_pred             HhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHH
Q 002539          615 ENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW  694 (911)
Q Consensus       615 ~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~  694 (911)
                      |.                                                  ++..++..                    
T Consensus       150 Hl--------------------------------------------------a~~~~~~~--------------------  159 (600)
T KOG0509|consen  150 HL--------------------------------------------------AAQFGHTA--------------------  159 (600)
T ss_pred             HH--------------------------------------------------HHHhCchH--------------------
Confidence            71                                                  22222221                    


Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                      ++-+|+.+|+++|.+|.+|+|||||||..|+...++.||+-|++++.+| ..|.||||||+..|+..+|.+|++.|++.+
T Consensus       160 ~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d  239 (600)
T KOG0509|consen  160 LVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLD  239 (600)
T ss_pred             HHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCccc
Confidence            5567788889999999999999999999999888999999999999998 899999999999999999998888889887


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHc
Q 002539          774 ALSDPTPKYPSGRTPADLASSI  795 (911)
Q Consensus       774 a~tDpn~~D~~G~TPLhlAa~~  795 (911)
                      .      +|.+|.||+++|..+
T Consensus       240 ~------~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  240 K------TNTNGKTPFDLAQER  255 (600)
T ss_pred             c------cccCCCCHHHHHHHh
Confidence            7      778899999999887

>PHA02792 ankyrin-like protein; Provisional

Probab=99.92  E-value=1.9e-24  Score=253.74  Aligned_cols=304  Identities=11%  Similarity=0.052  Sum_probs=213.2

Q ss_pred             CceEEEEEccccc---CcccchHHHHHHH-cCCcHHHHHHHHCCCCCCC-------------------------------
Q 002539          522 SEVKVLITGRFLM---SQQEAENCKWSCM-FGEIEVPAEIVAGGVLRCH-------------------------------  566 (911)
Q Consensus       522 ~~tKVlI~G~fl~---~~~~~T~LH~Ac~-~G~~eVV~~LL~~Gadvn~-------------------------------  566 (911)
                      +-+|+||.-++..   +..+.|++|+|+. .|+.||+++||+.||+.|.                               
T Consensus        86 Elvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (631)
T PHA02792         86 ELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYD  165 (631)
T ss_pred             HHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccc
Confidence            3445555544322   2345789999965 6999999999999998652                               


Q ss_pred             ---CCCCCCCChHHHHHHHcC---CCcchHHHHHHHHhCCCCccccCCCCChHHHh----h--HHHHHHHHhcCCCCCCC
Q 002539          567 ---TSSQKVGRVPFYVTCSNR---LSCSEVREFEYRASHIPDVDVADNCGDITSEN----L--RMQFGKLLCLTSVSTPN  634 (911)
Q Consensus       567 ---~~~d~~G~TPLhvAa~nG---~a~seVv~felLl~~GAdin~~D~~G~TpL~~----~--~~~ivkLLl~ga~v~~~  634 (911)
                         .-.+..|+||||+|+.++   ..|....++++|+++|++++..|..|.||||+    .  ..+++++|..++.....
T Consensus       166 ~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~  245 (631)
T PHA02792        166 YTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE  245 (631)
T ss_pred             cccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence               023456999999999987   22112333489999999999999999999986    2  57899999886554321


Q ss_pred             CCCCCchhhhHHHHHHHhhhccC-CcchhHHHHHHhhcCCC----------------------hHHHHHHHHHHHHHHh-
Q 002539          635 YDPSNLSDISQLNSKISSLLKDE-NDDWDLMLKLTAEEKFS----------------------SEEVKEKLVQKLLKEK-  690 (911)
Q Consensus       635 ~~~~~~~~~~~l~~~I~sl~~~d-~~g~t~L~~a~~~~~~~----------------------~~~~~~~ll~~a~k~~-  690 (911)
                      ..     ++  +...+..-...+ ..--..++..+..+.-.                      ..+....+++..+... 
T Consensus       246 ~~-----~~--l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~  318 (631)
T PHA02792        246 LM-----NI--LSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHT  318 (631)
T ss_pred             hH-----hH--HHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCC
Confidence            11     10  111111111100 00111111111111110                      0122333444444433 


Q ss_pred             hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCC--CcHHHHHHHcCCH---HHHHHH
Q 002539          691 LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNG--WTALHWAAYCGRE---RTVASL  765 (911)
Q Consensus       691 l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G--~TPLH~Aa~~G~~---eiVklL  765 (911)
                      ....++++|+++|++++  ...+..++|.||..|+.++|++|+++||++|.+|.+|  .||||+|+.....   +++++|
T Consensus       319 v~ieiIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL  396 (631)
T PHA02792        319 VYINVIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLC  396 (631)
T ss_pred             ccHHHHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHH
Confidence            34558999999999875  2235677999999999999999999999999999875  6999998877665   468999


Q ss_pred             HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhhhc---------------
Q 002539          766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG---------------  830 (911)
Q Consensus       766 L~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~~~---------------  830 (911)
                      +++|||+|.      +|..|+||||+|+..++.+++++|+++|     ++++.+|..|.||...+               
T Consensus       397 Is~GADIN~------kD~~G~TPLh~Aa~~~n~eivelLLs~G-----ADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~  465 (631)
T PHA02792        397 KPYIDDINK------IDKHGRSILYYCIESHSVSLVEWLIDNG-----ADINITTKYGSTCIGICVILAHACIPEIAELY  465 (631)
T ss_pred             HhcCCcccc------ccccCcchHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHHHhcccHHHHHHH
Confidence            999999988      8999999999999999999999999887     78999999999984332               


Q ss_pred             HHHHHHhhhcCCCCC
Q 002539          831 ATAVQTVPQRCPTPV  845 (911)
Q Consensus       831 ~~~V~~Lle~ga~~~  845 (911)
                      .++++.|+.+++++.
T Consensus       466 ~~il~lLLs~~p~i~  480 (631)
T PHA02792        466 IKILEIILSKLPTIE  480 (631)
T ss_pred             HHHHHHHHhcCCChh
Confidence            367899999987643

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=2e-24  Score=226.12  Aligned_cols=180  Identities=13%  Similarity=0.069  Sum_probs=149.0

Q ss_pred             ccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccC-CCCChHHH
Q 002539          537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD-NCGDITSE  615 (911)
Q Consensus       537 ~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D-~~G~TpL~  615 (911)
                      ...||||+|+..|++++|+.|++.+   +  ..+..|.||||+|+.++.  ....++++|++.|+++|.++ ..|.||||
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~~---n--~~~~~g~TpLh~a~~~~~--~~~eiv~~Ll~~gadvn~~~~~~g~TpLh   92 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKFV---N--DCNDLYETPIFSCLEKDK--VNVEILKFLIENGADVNFKTRDNNLSALH   92 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHhh---h--ccCccCCCHHHHHHHcCC--CCHHHHHHHHHCCCCCCccCCCCCCCHHH
Confidence            3468999999999999999999863   2  456779999999998763  23445589999999999996 47899887


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHH
Q 002539          616 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL  695 (911)
Q Consensus       616 ~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~L  695 (911)
                      ...                                                  ..+..                 ....+
T Consensus        93 ~a~--------------------------------------------------~~~~~-----------------~~~ei  105 (209)
T PHA02859         93 HYL--------------------------------------------------SFNKN-----------------VEPEI  105 (209)
T ss_pred             HHH--------------------------------------------------HhCcc-----------------ccHHH
Confidence            310                                                  00000                 00116


Q ss_pred             HHHHHhCCCCCCcccCCCCcHHHHHHH--cCCHhHHHhHHhcCCCccccCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCC
Q 002539          696 VQKAAEGGKGPCVLDHCGQGVLHFAAA--LGYDWALEPTTVAGVNINFRDVNGWTALHW-AAYCGRERTVASLIALGAAP  772 (911)
Q Consensus       696 v~lLle~Gad~n~~D~~G~TpLH~AA~--~G~~eiVklLLe~GAdvN~~D~~G~TPLH~-Aa~~G~~eiVklLL~~GAd~  772 (911)
                      +++|+++|+++|.+|..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++|++|+++|+++
T Consensus       106 v~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi  185 (209)
T PHA02859        106 LKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI  185 (209)
T ss_pred             HHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence            778999999999999999999999876  468999999999999999999999999995 56789999999999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHcC
Q 002539          773 GALSDPTPKYPSGRTPADLASSIG  796 (911)
Q Consensus       773 na~tDpn~~D~~G~TPLhlAa~~G  796 (911)
                      +.      +|..|+||||+|..++
T Consensus       186 ~~------~d~~g~tpl~la~~~~  203 (209)
T PHA02859        186 NE------TNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CC------CCCCCCCHHHHHhhhh
Confidence            87      8899999999999765

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.91  E-value=4.4e-24  Score=235.30  Aligned_cols=190  Identities=20%  Similarity=0.179  Sum_probs=157.9

Q ss_pred             cccchHHHHHHHcCCcHHHHHHHH-CCCCCC------CCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCC
Q 002539          536 QQEAENCKWSCMFGEIEVPAEIVA-GGVLRC------HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADN  608 (911)
Q Consensus       536 ~~~~T~LH~Ac~~G~~eVV~~LL~-~Gadvn------~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~  608 (911)
                      ..+-|||-+||.+|+.+||++|++ -++++.      .+...-.|-+||..|+..||  .+|+  ++|+++|++||....
T Consensus        40 ~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGH--l~vV--k~L~~~ga~VN~tT~  115 (615)
T KOG0508|consen   40 QNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGH--LEVV--KLLLRRGASVNDTTR  115 (615)
T ss_pred             cCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCc--HHHH--HHHHHhcCccccccc
Confidence            345678888888899998888887 344322      22233457788888888887  5555  788888888887755


Q ss_pred             CCChHHHhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHH
Q 002539          609 CGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK  688 (911)
Q Consensus       609 ~G~TpL~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k  688 (911)
                      ...|||.                                                  .++-+|+++              
T Consensus       116 TNStPLr--------------------------------------------------aACfDG~le--------------  131 (615)
T KOG0508|consen  116 TNSTPLR--------------------------------------------------AACFDGHLE--------------  131 (615)
T ss_pred             cCCccHH--------------------------------------------------HHHhcchhH--------------
Confidence            5555543                                                  333334332              


Q ss_pred             HhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002539          689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL  768 (911)
Q Consensus       689 ~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~  768 (911)
                            ++++|+++|+|+++.|..|.|.||+||..|+.+|+++|++.|||+|.++..|+|+||.|+..|+++||++||++
T Consensus       132 ------ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~  205 (615)
T KOG0508|consen  132 ------IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKH  205 (615)
T ss_pred             ------HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhC
Confidence                  78889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002539          769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       769 GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe  806 (911)
                      |+.+.       +|..|.|||..|+..|+.++|.+|+.
T Consensus       206 ga~i~-------~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  206 GAKID-------VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             Cceee-------ecCCCCchHHHHhhhcchHHHHHHhc
Confidence            99986       57889999999999999999999995

>PHA02730 ankyrin-like protein; Provisional

Probab=99.90  E-value=6.4e-23  Score=243.16  Aligned_cols=265  Identities=11%  Similarity=0.002  Sum_probs=178.2

Q ss_pred             ccchHHHHHHHcCCcHHHHHHHHCCCCCC-C----CCCCCCCC-hHHHHHHHcC----CCcchHHHHHHHHhCCCCcccc
Q 002539          537 QEAENCKWSCMFGEIEVPAEIVAGGVLRC-H----TSSQKVGR-VPFYVTCSNR----LSCSEVREFEYRASHIPDVDVA  606 (911)
Q Consensus       537 ~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn-~----~~~d~~G~-TPLhvAa~nG----~a~seVv~felLl~~GAdin~~  606 (911)
                      .+.+|+++|...|+++||++||+.|++++ +    ...+.++. |.||++.-.+    .-+.+++  ++|+++||++|.+
T Consensus       154 ~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv--~lLIs~GadIN~k  231 (672)
T PHA02730        154 LGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVI--KCLIDNNVSIHGR  231 (672)
T ss_pred             cchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHH--HHHHHCCCCCCCC
Confidence            45789999999999999999999999985 2    12334454 5555443321    0024454  8999999999999


Q ss_pred             CCCCChHHHh------hHHHHHHHHhcCCCCCCCCC----------------------C-CCchhhhHHH--------HH
Q 002539          607 DNCGDITSEN------LRMQFGKLLCLTSVSTPNYD----------------------P-SNLSDISQLN--------SK  649 (911)
Q Consensus       607 D~~G~TpL~~------~~~~ivkLLl~ga~v~~~~~----------------------~-~~~~~~~~l~--------~~  649 (911)
                      |..|.||||.      ++.+++++|+.+.+.-....                      . .-...+..+.        .-
T Consensus       232 d~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  311 (672)
T PHA02730        232 DEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDV  311 (672)
T ss_pred             CCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhh
Confidence            9999999973      44899999987221100000                      0 0000000000        00


Q ss_pred             HHhhhccCCc-----------------------------------chhHHHHHHhhcCCCh--HHHHHHHHHHHHHHhh-
Q 002539          650 ISSLLKDEND-----------------------------------DWDLMLKLTAEEKFSS--EEVKEKLVQKLLKEKL-  691 (911)
Q Consensus       650 I~sl~~~d~~-----------------------------------g~t~L~~a~~~~~~~~--~~~~~~ll~~a~k~~l-  691 (911)
                      +.++...+..                                   ....+.+.+...+.+.  .......+|.++.... 
T Consensus       312 ~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k~~G~TpLH~Aa~~nnn  391 (672)
T PHA02730        312 MRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKTTDNNYPLHDYFVNNNN  391 (672)
T ss_pred             hhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcCCCCCcHHHHHHHHcCC
Confidence            0000000111                                   1112222222122211  1112234665555442 


Q ss_pred             --HHHHHHHHHhCCC--CCCcccCCCCcHHHH---HHHcC---------CHhHHHhHHhcCCCccccCCCCCcHHHHHHH
Q 002539          692 --QVWLVQKAAEGGK--GPCVLDHCGQGVLHF---AAALG---------YDWALEPTTVAGVNINFRDVNGWTALHWAAY  755 (911)
Q Consensus       692 --~~~Lv~lLle~Ga--d~n~~D~~G~TpLH~---AA~~G---------~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~  755 (911)
                        ...++++|+++|+  ++|.+|..|.||||.   |+..+         ..+++++|+.+||++|.+|..|+||||+|+.
T Consensus       392 ~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~  471 (672)
T PHA02730        392 IVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVD  471 (672)
T ss_pred             cchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHH
Confidence              2458999999997  699999999999994   33332         2356999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHc--CcHHHHHHHHHcCC
Q 002539          756 CGRERTVASLIALGAAPGALSDPTPKYP-SGRTPADLASSI--GHKGIAGYLAESDL  809 (911)
Q Consensus       756 ~G~~eiVklLL~~GAd~na~tDpn~~D~-~G~TPLhlAa~~--G~~eIvklLLe~G~  809 (911)
                      .++.++|++||++||++|+      +|. .|.||||+|+..  |+.+++++|+++|+
T Consensus       472 ~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga  522 (672)
T PHA02730        472 VNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENKTKLVDLLLSYHP  522 (672)
T ss_pred             hCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCC
Confidence            9999999999999999988      675 599999999984  79999999999884

>PHA02795 ankyrin-like protein; Provisional

Probab=99.90  E-value=4.4e-23  Score=234.70  Aligned_cols=215  Identities=15%  Similarity=-0.010  Sum_probs=149.6

Q ss_pred             HHHHcCCcHHHHHHHHCCCCCCC----CCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHhhHH
Q 002539          544 WSCMFGEIEVPAEIVAGGVLRCH----TSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRM  619 (911)
Q Consensus       544 ~Ac~~G~~eVV~~LL~~Gadvn~----~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~~~~  619 (911)
                      +|+.++..|+++.|+.+|++++.    -..+..++|+||+|+.++.  ..+.++++|+.+||+++..  ++.||+|    
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~--n~~eiV~~LI~~GADIn~~--~~~t~lh----  154 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAY--VEIDIVDFMVDHGAVIYKI--ECLNAYF----  154 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcC--CCHHHHHHHHHCCCCCCCC--CCCCHHH----
Confidence            77777777777777777776551    1244557777777777432  2233336777777777663  2345554    


Q ss_pred             HHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHH
Q 002539          620 QFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKA  699 (911)
Q Consensus       620 ~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lL  699 (911)
                                                                    .++..++..                    ++++|
T Consensus       155 ----------------------------------------------~A~~~~~~e--------------------IVk~L  168 (437)
T PHA02795        155 ----------------------------------------------RGICKKESS--------------------VVEFI  168 (437)
T ss_pred             ----------------------------------------------HHHHcCcHH--------------------HHHHH
Confidence                                                          222212111                    44555


Q ss_pred             HhCCCCCCcc------cCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          700 AEGGKGPCVL------DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       700 le~Gad~n~~------D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                      +.+|++.+..      +..|.|++|.|+..++.+++++|+++||++|.+|..|+||||+|+..|+.++|++||++||+++
T Consensus       169 ls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN  248 (437)
T PHA02795        169 LNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVN  248 (437)
T ss_pred             HhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            5555432111      2347799999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcC--------cHHHHHHHHHcCCCCccccCcccCCCCCcHhhhcHHHHHHhhhcCCC
Q 002539          774 ALSDPTPKYPSGRTPADLASSIG--------HKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPT  843 (911)
Q Consensus       774 a~tDpn~~D~~G~TPLhlAa~~G--------~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~~~~~~V~~Lle~ga~  843 (911)
                      +      +|..|+||||+|+..|        |.+++++|+++|     ++++.....+..-.....++++.++.....
T Consensus       249 ~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g-----adI~~~~~~~~~~~~~n~~~ik~lI~y~~~  315 (437)
T PHA02795        249 A------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP-----LSIDCIKLAILNNTIENHDVIKLCIKYFMM  315 (437)
T ss_pred             C------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC-----CCCCchhHHhhhcccchHHHHHHHHHHHHh
Confidence            8      8889999999999988        479999999887     456554433211122355677777766653

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.89  E-value=1.3e-23  Score=231.66  Aligned_cols=215  Identities=17%  Similarity=0.138  Sum_probs=170.0

Q ss_pred             HHHHcCCcHHHHHHHHCCCC---CCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHh-CCCCcccc---CCCCChHHHh
Q 002539          544 WSCMFGEIEVPAEIVAGGVL---RCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRAS-HIPDVDVA---DNCGDITSEN  616 (911)
Q Consensus       544 ~Ac~~G~~eVV~~LL~~Gad---vn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~-~GAdin~~---D~~G~TpL~~  616 (911)
                      -|+..|.+...+.|+.....   +........|.|||-+||++||  .+|+  +||+. .++++...   ..+|.+    
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH--~~vV--eyLle~~~a~~e~~GsV~FDge~----   81 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGH--ADVV--EYLLEHCRASPEQGGSVRFDGET----   81 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCc--HHHH--HHHHHHhcCCccCCceEEeCCcc----
Confidence            35667777766666544221   1111224558999999999998  5666  77776 56665443   011111    


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHH
Q 002539          617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV  696 (911)
Q Consensus       617 ~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv  696 (911)
                                                               .+|..||..+...+++.                    +|
T Consensus        82 -----------------------------------------IegappLWaAsaAGHl~--------------------vV  100 (615)
T KOG0508|consen   82 -----------------------------------------IEGAPPLWAASAAGHLE--------------------VV  100 (615)
T ss_pred             -----------------------------------------cCCCchhhHHhccCcHH--------------------HH
Confidence                                                     34556666665545443                    89


Q ss_pred             HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002539          697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS  776 (911)
Q Consensus       697 ~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~t  776 (911)
                      +.|+++|+++|.......|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||++||.+|+++|++.|||+|+  
T Consensus       101 k~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~--  178 (615)
T KOG0508|consen  101 KLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA--  178 (615)
T ss_pred             HHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch--
Confidence            999999999999988999999999999999999999999999999999999999999999999999999999999998  


Q ss_pred             CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhhh
Q 002539          777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQ  839 (911)
Q Consensus       777 Dpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle  839 (911)
                          ++..|.|+||.|+..|+.+|+++|+.+|+     .+. +|..|-||     ..|..++|..|++
T Consensus       179 ----ks~kGNTALH~caEsG~vdivq~Ll~~ga-----~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  179 ----KSYKGNTALHDCAESGSVDIVQLLLKHGA-----KID-VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             ----hcccCchHHHhhhhcccHHHHHHHHhCCc-----eee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence                88999999999999999999999998884     343 45668887     5667799999986

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.88  E-value=5.3e-22  Score=207.93  Aligned_cols=123  Identities=18%  Similarity=0.054  Sum_probs=111.8

Q ss_pred             HHHHHHhCCCCCCccc-CCCCcHHHHHHHc---CCHhHHHhHHhcCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHHc
Q 002539          695 LVQKAAEGGKGPCVLD-HCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAY--CGRERTVASLIAL  768 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D-~~G~TpLH~AA~~---G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~--~G~~eiVklLL~~  768 (911)
                      ++++|+++|+++|.++ ..|+||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|+.  .++.+++++|+++
T Consensus        68 iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~  147 (209)
T PHA02859         68 ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS  147 (209)
T ss_pred             HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence            7788999999999997 4899999998864   47999999999999999999999999999986  4789999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHH-HHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh
Q 002539          769 GAAPGALSDPTPKYPSGRTPADL-ASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV  828 (911)
Q Consensus       769 GAd~na~tDpn~~D~~G~TPLhl-Aa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~  828 (911)
                      |++++.      +|..|.||||. |+..++.+++++|+++|     ++++.+|..|.||..
T Consensus       148 gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G-----adi~~~d~~g~tpl~  197 (209)
T PHA02859        148 GVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLG-----IDINETNKSGYNCYD  197 (209)
T ss_pred             CCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHH
Confidence            999988      88999999996 56788999999999988     689999999999843

>PHA02795 ankyrin-like protein; Provisional

Probab=99.87  E-value=1.3e-21  Score=222.80  Aligned_cols=193  Identities=13%  Similarity=0.020  Sum_probs=150.1

Q ss_pred             cCcccchHHHHHHH--cCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCC
Q 002539          534 MSQQEAENCKWSCM--FGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD  611 (911)
Q Consensus       534 ~~~~~~T~LH~Ac~--~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~  611 (911)
                      ......|+||.|+.  .|+.++|++||++||+++.  .  .+.||||.|+.+++  .+++  ++|+++|++.+.   .+.
T Consensus       112 ~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~--~--~~~t~lh~A~~~~~--~eIV--k~Lls~Ga~~~n---~~~  180 (437)
T PHA02795        112 NCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK--I--ECLNAYFRGICKKE--SSVV--EFILNCGIPDEN---DVK  180 (437)
T ss_pred             ccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC--C--CCCCHHHHHHHcCc--HHHH--HHHHhcCCcccc---ccc
Confidence            34557999999999  9999999999999999873  3  36899999999885  6666  889999985422   122


Q ss_pred             hHHHhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhh
Q 002539          612 ITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL  691 (911)
Q Consensus       612 TpL~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l  691 (911)
                      +++..                                         ..+.++++.+...+                    
T Consensus       181 ~~l~~-----------------------------------------~~~~t~l~~a~~~~--------------------  199 (437)
T PHA02795        181 LDLYK-----------------------------------------IIQYTRGFLVDEPT--------------------  199 (437)
T ss_pred             chhhh-----------------------------------------hhccchhHHHHhcC--------------------
Confidence            32220                                         01123333332211                    


Q ss_pred             HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcC--------CHHHHH
Q 002539          692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG--------RERTVA  763 (911)
Q Consensus       692 ~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G--------~~eiVk  763 (911)
                      ...++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|        +.++|+
T Consensus       200 ~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIve  279 (437)
T PHA02795        200 VLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILE  279 (437)
T ss_pred             HHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHH
Confidence            223889999999999999999999999999999999999999999999999999999999999998        469999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 002539          764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       764 lLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~  809 (911)
                      +|+++|++++.         .+.|++...  ..+.++++.|+.+..
T Consensus       280 lLL~~gadI~~---------~~~~~~~~~--~~n~~~ik~lI~y~~  314 (437)
T PHA02795        280 ILLREPLSIDC---------IKLAILNNT--IENHDVIKLCIKYFM  314 (437)
T ss_pred             HHHhCCCCCCc---------hhHHhhhcc--cchHHHHHHHHHHHH
Confidence            99999999876         223333221  227789999998774

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.87  E-value=9e-22  Score=244.19  Aligned_cols=116  Identities=14%  Similarity=0.016  Sum_probs=64.0

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +++.|+++|+++|.+|.+|.||||+|+..|+.+++++|+..++..+.  ..|.||||+||..|+.++|++||++|+|+|.
T Consensus       573 ~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~  650 (823)
T PLN03192        573 CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDS  650 (823)
T ss_pred             HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCC
Confidence            34445555555555555555555555555555555555555544332  2344555555555555555555555555554


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCC
Q 002539          775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG  823 (911)
Q Consensus       775 ~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G  823 (911)
                            +|..|+||||+|+..|+.+++++|+++|     ++++..|..|
T Consensus       651 ------~d~~G~TpLh~A~~~g~~~iv~~Ll~~G-----Adv~~~~~~g  688 (823)
T PLN03192        651 ------EDHQGATALQVAMAEDHVDMVRLLIMNG-----ADVDKANTDD  688 (823)
T ss_pred             ------CCCCCCCHHHHHHHCCcHHHHHHHHHcC-----CCCCCCCCCC
Confidence                  5555555555555555555555555555     4555555544

>PHA02792 ankyrin-like protein; Provisional

Probab=99.86  E-value=1.5e-20  Score=221.08  Aligned_cols=260  Identities=11%  Similarity=-0.087  Sum_probs=176.1

Q ss_pred             cCcccchHHHHHHHcC-------CcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCcccc
Q 002539          534 MSQQEAENCKWSCMFG-------EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVA  606 (911)
Q Consensus       534 ~~~~~~T~LH~Ac~~G-------~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~  606 (911)
                      .+..+.||||+|+..+       ..+|++.||.+|++++  ..+..|.||||+|+...+  ....+|++|+.. ++..  
T Consensus       171 ~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~--~~d~~g~t~l~~~~~~~~--i~~ei~~~L~~~-~~~~--  243 (631)
T PHA02792        171 DDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR--YYTYREHTTLYYYVDKCD--IKREIFDALFDS-NYSG--  243 (631)
T ss_pred             CCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC--ccCCCCChHHHHHHHccc--chHHHHHHHHhc-cccc--
Confidence            4455789999999999       8999999999999976  567779999999998864  356667888874 2111  


Q ss_pred             CCCCChHHH-h-----------hHHHHHHHHhcCCCCCCCCC---CCCch-hhhHH-------HHHHHhhhccCCcchhH
Q 002539          607 DNCGDITSE-N-----------LRMQFGKLLCLTSVSTPNYD---PSNLS-DISQL-------NSKISSLLKDENDDWDL  663 (911)
Q Consensus       607 D~~G~TpL~-~-----------~~~~ivkLLl~ga~v~~~~~---~~~~~-~~~~l-------~~~I~sl~~~d~~g~t~  663 (911)
                       .+-+--|. +           ....+|.+|+.+........   ..... ....+       ++.+.............
T Consensus       244 -~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ie  322 (631)
T PHA02792        244 -NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYIN  322 (631)
T ss_pred             -cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHH
Confidence             11111221 1           23447888887665322111   11111 11111       11111111111223334


Q ss_pred             HHHHHhhcCCChH--HHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCC--CcHHHHHHHcCCH---hHHHhHHhcC
Q 002539          664 MLKLTAEEKFSSE--EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCG--QGVLHFAAALGYD---WALEPTTVAG  736 (911)
Q Consensus       664 L~~a~~~~~~~~~--~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G--~TpLH~AA~~G~~---eiVklLLe~G  736 (911)
                      +++.+...+....  ..... ++.++..+. ..++++|+++|++++.+|..|  .||||+|+.....   +++++|+++|
T Consensus       323 iIK~LId~Ga~~~r~~~~n~-~~~Aa~~gn-~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G  400 (631)
T PHA02792        323 VIKCMIDEGATLYRFKHINK-YFQKFDNRD-PKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI  400 (631)
T ss_pred             HHHHHHHCCCccccCCcchH-HHHHHHcCC-HHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC
Confidence            4444444444321  11122 333333322 238999999999999999875  6999998877654   4688999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH----------cCcHHHHHHHHH
Q 002539          737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS----------IGHKGIAGYLAE  806 (911)
Q Consensus       737 AdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~----------~G~~eIvklLLe  806 (911)
                      |++|.+|..|+||||+|+..++.+++++|+++||+++.      +|..|+||||+|+.          ....+++++|++
T Consensus       401 ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs  474 (631)
T PHA02792        401 DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEIILS  474 (631)
T ss_pred             CccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999988      88999999999976          223677899998


Q ss_pred             cCC
Q 002539          807 SDL  809 (911)
Q Consensus       807 ~G~  809 (911)
                      +|.
T Consensus       475 ~~p  477 (631)
T PHA02792        475 KLP  477 (631)
T ss_pred             cCC
Confidence            874

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.85  E-value=7.6e-21  Score=233.77  Aligned_cols=229  Identities=14%  Similarity=0.069  Sum_probs=172.0

Q ss_pred             chHHHHHHHcCCcHHHHHHHHC--CCCCCCCCCCCCCChHHH-HHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHH
Q 002539          539 AENCKWSCMFGEIEVPAEIVAG--GVLRCHTSSQKVGRVPFY-VTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE  615 (911)
Q Consensus       539 ~T~LH~Ac~~G~~eVV~~LL~~--Gadvn~~~~d~~G~TPLh-vAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~  615 (911)
                      ...++.||..|+.+.|+.+++.  ++++|  ..|..|+|||| .|+.+++  .+++  ++|+..|+    .+..|.||||
T Consensus        18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in--~~d~~G~t~Lh~~A~~~~~--~eiv--~lLl~~g~----~~~~G~T~Lh   87 (743)
T TIGR00870        18 EKAFLPAAERGDLASVYRDLEEPKKLNIN--CPDRLGRSALFVAAIENEN--LELT--ELLLNLSC----RGAVGDTLLH   87 (743)
T ss_pred             HHHHHHHHHcCCHHHHHHHhccccccCCC--CcCccchhHHHHHHHhcCh--HHHH--HHHHhCCC----CCCcChHHHH
Confidence            5699999999999999999999  77766  67778999999 7777764  5555  78899887    6788999998


Q ss_pred             hhHH---H----HHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHH
Q 002539          616 NLRM---Q----FGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK  688 (911)
Q Consensus       616 ~~~~---~----ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k  688 (911)
                      ....   +    ++.++..........         .+...  ........+.+|||.|+..++.+              
T Consensus        88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~---------~~~~~--~~~~~~~~G~TpLhlAa~~~~~e--------------  142 (743)
T TIGR00870        88 AISLEYVDAVEAILLHLLAAFRKSGPL---------ELAND--QYTSEFTPGITALHLAAHRQNYE--------------  142 (743)
T ss_pred             HHHhccHHHHHHHHHHHhhcccccCch---------hhhcc--ccccccCCCCcHHHHHHHhCCHH--------------
Confidence            6322   2    233333221110000         00000  00111246889999988766543              


Q ss_pred             HhhHHHHHHHHHhCCCCCCccc--------------CCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHH
Q 002539          689 EKLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA  754 (911)
Q Consensus       689 ~~l~~~Lv~lLle~Gad~n~~D--------------~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa  754 (911)
                            ++++|+++|++++.++              ..|.||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+
T Consensus       143 ------iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~  216 (743)
T TIGR00870       143 ------IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLV  216 (743)
T ss_pred             ------HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHH
Confidence                  8899999999999763              25899999999999999999999999999999999999999999


Q ss_pred             HcC---------CHHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002539          755 YCG---------RERTVASLIALGAAPGALSD-PTPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       755 ~~G---------~~eiVklLL~~GAd~na~tD-pn~~D~~G~TPLhlAa~~G~~eIvklLLe~G  808 (911)
                      ..+         ...+.+++++.++......+ .+.+|.+|.||||+|+..|+.+++++|++.+
T Consensus       217 ~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       217 MENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence            987         34567778877776532100 0347899999999999999999999999853

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-20  Score=212.61  Aligned_cols=226  Identities=23%  Similarity=0.254  Sum_probs=168.6

Q ss_pred             HHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----
Q 002539          541 NCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----  616 (911)
Q Consensus       541 ~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----  616 (911)
                      .+--||+.|+.+-|..||..|+..+.+  +.+|.|+||-+|...+  .+|+  .||+++|++||..|.+|+||||.    
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~--n~DglTalhq~~id~~--~e~v--~~l~e~ga~Vn~~d~e~wtPlhaaasc  116 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLC--NVDGLTALHQACIDDN--LEMV--KFLVENGANVNAQDNEGWTPLHAAASC  116 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCcccc--CCccchhHHHHHhccc--HHHH--HHHHHhcCCccccccccCCcchhhccc
Confidence            566789999999999999999887644  4459999999998864  4444  89999999999999999999974    


Q ss_pred             hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHH
Q 002539          617 LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL  695 (911)
Q Consensus       617 ~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~L  695 (911)
                      ++..++++|+ .|++...... .++.+..         +..+....+.+.......+++....+...-..++++     +
T Consensus       117 g~~~i~~~li~~gA~~~avNs-dg~~P~d---------l~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D-----~  181 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLAVNS-DGNMPYD---------LAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDD-----A  181 (527)
T ss_pred             ccHHHHHHHHHhhhhhhhccC-CCCCccc---------cccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHH-----H
Confidence            8899998887 4554433222 2211110         111122233333333334444332232222222222     2


Q ss_pred             HHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002539          696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGAL  775 (911)
Q Consensus       696 v~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~  775 (911)
                      .+. +..|...++.+..|.|.||.|+.+||.++.++||++|.+++.+|.+||||||.||..|..+++++|+++|+++++ 
T Consensus       182 ~q~-l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~-  259 (527)
T KOG0505|consen  182 RQW-LNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDA-  259 (527)
T ss_pred             HHH-HhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccch-
Confidence            222 337889999998999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             CCCCCCCCCCCCHHHHHHH
Q 002539          776 SDPTPKYPSGRTPADLASS  794 (911)
Q Consensus       776 tDpn~~D~~G~TPLhlAa~  794 (911)
                           +...|.||+.+|..
T Consensus       260 -----~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  260 -----KTKMGETPLDVADE  273 (527)
T ss_pred             -----hhhcCCCCccchhh
Confidence                 77899999999876

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.84  E-value=5.2e-21  Score=194.19  Aligned_cols=225  Identities=18%  Similarity=0.122  Sum_probs=182.7

Q ss_pred             HHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh----
Q 002539          541 NCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----  616 (911)
Q Consensus       541 ~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~----  616 (911)
                      -+.-+...|+.+++..++.-..+. ...++..|+.++++|+-.++    +.+...++.+|+..|..+.-+++|++.    
T Consensus        65 ~~~~~~~s~nsd~~v~s~~~~~~~-~~~t~p~g~~~~~v~ap~~s----~~k~sttltN~~rgnevs~~p~s~~slsVhq  139 (296)
T KOG0502|consen   65 LLTVAVRSGNSDVAVQSAQLDPDA-IDETDPEGWSALLVAAPCGS----VDKVSTTLTNGARGNEVSLMPWSPLSLSVHQ  139 (296)
T ss_pred             ccchhhhcCCcHHHHHhhccCCCC-CCCCCchhhhhhhhcCCCCC----cceeeeeecccccCCccccccCChhhHHHHH
Confidence            345677889999888887777653 34455569999999986664    444468899999999999999999853    


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHH
Q 002539          617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV  696 (911)
Q Consensus       617 ~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv  696 (911)
                      .+++.+.+|.. ..+                      ...|..|+++|+.++..|++.                    ++
T Consensus       140 l~L~~~~~~~~-n~V----------------------N~~De~GfTpLiWAaa~G~i~--------------------vV  176 (296)
T KOG0502|consen  140 LHLDVVDLLVN-NKV----------------------NACDEFGFTPLIWAAAKGHIP--------------------VV  176 (296)
T ss_pred             HHHHHHHHHhh-ccc----------------------cCccccCchHhHHHHhcCchH--------------------HH
Confidence            55555544432 222                      223478999999999988876                    78


Q ss_pred             HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 002539          697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS  776 (911)
Q Consensus       697 ~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~t  776 (911)
                      ++|++.|++|+...+...++|.+|+..|+.+||++||.+++|||.-|-+|-|||-+|++.||.+||+.||..||+++.  
T Consensus       177 ~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~--  254 (296)
T KOG0502|consen  177 QFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ--  254 (296)
T ss_pred             HHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999887  


Q ss_pred             CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCc
Q 002539          777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV  825 (911)
Q Consensus       777 Dpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~T  825 (911)
                          .+..|.+++.+|+..|+. +|+..+++-     +....+|+.-.+
T Consensus       255 ----e~dsGy~~mdlAValGyr-~Vqqvie~h-----~lkl~Q~~~~~~  293 (296)
T KOG0502|consen  255 ----EDDSGYWIMDLAVALGYR-IVQQVIEKH-----ALKLCQDSEKRT  293 (296)
T ss_pred             ----ccccCCcHHHHHHHhhhH-HHHHHHHHH-----HHHHhhcccCCC
Confidence                778999999999999998 888888755     355555554433

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.81  E-value=6.9e-20  Score=197.39  Aligned_cols=104  Identities=27%  Similarity=0.294  Sum_probs=92.0

Q ss_pred             HHHHHhCCCCCCccc-CCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCC
Q 002539          696 VQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL-GAAPG  773 (911)
Q Consensus       696 v~lLle~Gad~n~~D-~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~-GAd~n  773 (911)
                      |+.|...| ++|++- ..|+|+|++|+..|+.++|+.||.+|||||.+|.+|-|+|++||.+||.+||++||.. ++|+.
T Consensus       323 V~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s  401 (452)
T KOG0514|consen  323 VERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS  401 (452)
T ss_pred             HHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccce
Confidence            33344334 677664 5799999999999999999999999999999999999999999999999999999966 77776


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 002539          774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       774 a~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe  806 (911)
                      +      .|.+|-|+|.+|...||.+|.-+|-.
T Consensus       402 L------tD~DgSTAl~IAleagh~eIa~mlYa  428 (452)
T KOG0514|consen  402 L------TDVDGSTALSIALEAGHREIAVMLYA  428 (452)
T ss_pred             e------ecCCCchhhhhHHhcCchHHHHHHHH
Confidence            6      88999999999999999999998874

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.79  E-value=1.1e-18  Score=216.64  Aligned_cols=142  Identities=18%  Similarity=0.149  Sum_probs=131.4

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +++.|++.|+++|..|..|+||||+||..|+.++|++|+++|+++|.+|.+|+||||+|+..|+.++|++|++.++..+.
T Consensus       540 ~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~  619 (823)
T PLN03192        540 LLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP  619 (823)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc
Confidence            77889999999999999999999999999999999999999999999999999999999999999999999998876543


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhcCCCCCCCCC
Q 002539          775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPTPVSDGD  849 (911)
Q Consensus       775 ~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~ga~~~~~~~  849 (911)
                              ..|.+|||+|+.+|+.+++++|+++|     ++++.+|.+|.||     ..+..++++.|+++||+++..+.
T Consensus       620 --------~~~~~~L~~Aa~~g~~~~v~~Ll~~G-----adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~  686 (823)
T PLN03192        620 --------HAAGDLLCTAAKRNDLTAMKELLKQG-----LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT  686 (823)
T ss_pred             --------ccCchHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCC
Confidence                    46789999999999999999999988     6899999999998     45667999999999999887654

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.79  E-value=9.9e-20  Score=214.03  Aligned_cols=299  Identities=16%  Similarity=0.087  Sum_probs=201.9

Q ss_pred             ccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCcccc-CCCCChHHH
Q 002539          537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVA-DNCGDITSE  615 (911)
Q Consensus       537 ~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~-D~~G~TpL~  615 (911)
                      ...|+|-+||..|+.|+|.+||.+|+++.  -+|+.|.|||.+|+..||  ..|+  +.|+++-++++++ |..+.|+|-
T Consensus       756 n~~t~LT~acaggh~e~vellv~rganie--hrdkkgf~plImaatagh--~tvV--~~llk~ha~veaQsdrtkdt~lS  829 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRGANIE--HRDKKGFVPLIMAATAGH--ITVV--QDLLKAHADVEAQSDRTKDTMLS  829 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhccccc--ccccccchhhhhhcccCc--hHHH--HHHHhhhhhhhhhcccccCceEE
Confidence            45689999999999999999999999866  677889999999999997  4555  7889999999987 888999984


Q ss_pred             h----hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChH------HHHHHHHH
Q 002539          616 N----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSE------EVKEKLVQ  684 (911)
Q Consensus       616 ~----~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~------~~~~~ll~  684 (911)
                      .    +..++|.+|+ .++....+.. +..+++...          ...+.+.+++++...+....      ..... |.
T Consensus       830 lacsggr~~vvelLl~~gankehrnv-sDytPlsla----------~Sggy~~iI~~llS~GseInSrtgSklgisP-Lm  897 (2131)
T KOG4369|consen  830 LACSGGRTRVVELLLNAGANKEHRNV-SDYTPLSLA----------RSGGYTKIIHALLSSGSEINSRTGSKLGISP-LM  897 (2131)
T ss_pred             EecCCCcchHHHHHHHhhccccccch-hhcCchhhh----------cCcchHHHHHHHhhcccccccccccccCcch-hh
Confidence            3    7788888887 5554433322 111111100          02233333332221110000      00000 11


Q ss_pred             HHHHHhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 002539          685 KLLKEKLQVWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA  763 (911)
Q Consensus       685 ~a~k~~l~~~Lv~lLle~Gad~n~~D~-~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVk  763 (911)
                      .+...+ +...++.|++.|.|+|+.-. +.+|+|-+|+..|+.++|.+||.+.+++..|-+.|.|||+-+|..|.+++=+
T Consensus       898 latmng-h~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~  976 (2131)
T KOG4369|consen  898 LATMNG-HQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGN  976 (2131)
T ss_pred             hhhhcc-ccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccch
Confidence            111111 12245667888888887543 5678888888888888888888888888888888888888888888888888


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhh
Q 002539          764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVP  838 (911)
Q Consensus       764 lLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Ll  838 (911)
                      +||..|||+|+--    .-..-.|+|-+++..||...|++|+...     +.+.++|+.|.|+     .-++...+..|+
T Consensus       977 ~li~~gad~nasP----vp~T~dtalti~a~kGh~kfv~~lln~~-----atv~v~NkkG~T~Lwla~~Gg~lss~~il~ 1047 (2131)
T KOG4369|consen  977 LLIAAGADTNASP----VPNTWDTALTIPANKGHTKFVPKLLNGD-----ATVRVPNKKGCTVLWLASAGGALSSCPILV 1047 (2131)
T ss_pred             hhhhcccccccCC----CCCcCCccceeecCCCchhhhHHhhCCc-----cceecccCCCCcccchhccCCccccchHHh
Confidence            8888888888732    2223457788888888888888887654     5677888888665     445567788888


Q ss_pred             hcCCCCCCCCCCCCccchhhHHHHHHHHH
Q 002539          839 QRCPTPVSDGDLPYGLSMKDSLAAVRNAT  867 (911)
Q Consensus       839 e~ga~~~~~~~~~~~lsLkdsLaAvr~Aa  867 (911)
                      +.++++...+.    ......++|+|+..
T Consensus      1048 ~~~ad~d~qdn----r~~S~~maafRKgh 1072 (2131)
T KOG4369|consen 1048 SSVADADQQDN----RTNSRTMAAFRKGH 1072 (2131)
T ss_pred             hcccChhhhhc----ccccccHHHHHhch
Confidence            88887664332    11223456666643

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.79  E-value=8.8e-19  Score=177.10  Aligned_cols=120  Identities=23%  Similarity=0.158  Sum_probs=108.6

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhH---HHhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHH-cC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWA---LEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIA-LG  769 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~ei---VklLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~-~G  769 (911)
                      +++.|.+.|++++.+|..|+||||+||..|+.++   +++|+++|+++|.+| ..|+||||+|+..|+.+++++|+. .|
T Consensus        39 ~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g  118 (166)
T PHA02743         39 VAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLG  118 (166)
T ss_pred             HHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC
Confidence            5567788999999999999999999999998654   799999999999998 589999999999999999999995 89


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCc
Q 002539          770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV  825 (911)
Q Consensus       770 Ad~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~T  825 (911)
                      ++++.      +|..|.||||+|+..|+.+++++|+++|     ++++.++..|..
T Consensus       119 ad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~g-----a~~~~~~~~~~~  163 (166)
T PHA02743        119 VNLGA------INYQHETAYHIAYKMRDRRMMEILRANG-----AVCDDPLSIGLS  163 (166)
T ss_pred             CCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcccCCcc
Confidence            99887      8899999999999999999999999888     678888777653

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.76  E-value=3.8e-18  Score=209.96  Aligned_cols=217  Identities=13%  Similarity=-0.012  Sum_probs=164.2

Q ss_pred             CCCChHHHHHHHcCCCcchHHHHHHHHhC--CCCccccCCCCChHHH-h----hHHHHHHHHhcCCCCCCCCCCCCchhh
Q 002539          571 KVGRVPFYVTCSNRLSCSEVREFEYRASH--IPDVDVADNCGDITSE-N----LRMQFGKLLCLTSVSTPNYDPSNLSDI  643 (911)
Q Consensus       571 ~~G~TPLhvAa~nG~a~seVv~felLl~~--GAdin~~D~~G~TpL~-~----~~~~ivkLLl~ga~v~~~~~~~~~~~~  643 (911)
                      ..+..+|+.||..|.    +..++.++..  +.++|..|..|.|||| .    ++.+++++|+..+.             
T Consensus        15 ~~~~~~~l~A~~~g~----~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-------------   77 (743)
T TIGR00870        15 SDEEKAFLPAAERGD----LASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-------------   77 (743)
T ss_pred             CHHHHHHHHHHHcCC----HHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-------------
Confidence            347899999999985    3334667777  8999999999999998 2    78889999886443             


Q ss_pred             hHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC------C----CcccCCC
Q 002539          644 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG------P----CVLDHCG  713 (911)
Q Consensus       644 ~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad------~----n~~D~~G  713 (911)
                                  .+..|.++||.++.. ...                ..+.++..+...+.+      +    ......|
T Consensus        78 ------------~~~~G~T~Lh~A~~~-~~~----------------~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G  128 (743)
T TIGR00870        78 ------------RGAVGDTLLHAISLE-YVD----------------AVEAILLHLLAAFRKSGPLELANDQYTSEFTPG  128 (743)
T ss_pred             ------------CCCcChHHHHHHHhc-cHH----------------HHHHHHHHHhhcccccCchhhhccccccccCCC
Confidence                        114566778766541 111                111233344433321      1    1123579


Q ss_pred             CcHHHHHHHcCCHhHHHhHHhcCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 002539          714 QGVLHFAAALGYDWALEPTTVAGVNINFRD--------------VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPT  779 (911)
Q Consensus       714 ~TpLH~AA~~G~~eiVklLLe~GAdvN~~D--------------~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn  779 (911)
                      .||||+||..|+.++|++||++||+++.++              ..|.||||+|+..|+.+++++|+++|||++.     
T Consensus       129 ~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~-----  203 (743)
T TIGR00870       129 ITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT-----  203 (743)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh-----
Confidence            999999999999999999999999999764              3699999999999999999999999999887     


Q ss_pred             CCCCCCCCHHHHHHHcC---------cHHHHHHHHHcCCCCccccC----cccCCCCCcH-----hhhcHHHHHHhhhcC
Q 002539          780 PKYPSGRTPADLASSIG---------HKGIAGYLAESDLSSALSAI----SLNKKDGDVA-----EVTGATAVQTVPQRC  841 (911)
Q Consensus       780 ~~D~~G~TPLhlAa~~G---------~~eIvklLLe~G~~sh~adl----n~~D~~G~Ta-----~~~~~~~V~~Lle~g  841 (911)
                       +|..|+||||+|+..+         ...+.+++++.+.  +..+.    ++.|.+|.||     ..+..++++.|++.+
T Consensus       204 -~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~--~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       204 -ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLD--KLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             -HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh--ccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence             8899999999999987         3456777777662  33344    7789999987     456779999999853

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02741 hypothetical protein; Provisional

Probab=99.76  E-value=5e-18  Score=171.89  Aligned_cols=129  Identities=19%  Similarity=0.161  Sum_probs=112.1

Q ss_pred             cCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHH------hCCCCCCcccCCCCcHHHHHHHcCC----
Q 002539          656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA------EGGKGPCVLDHCGQGVLHFAAALGY----  725 (911)
Q Consensus       656 ~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLl------e~Gad~n~~D~~G~TpLH~AA~~G~----  725 (911)
                      .+..+.++||.++..++..                    +++.|+      ..|++++.+|..|+||||+|+..|+    
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~--------------------~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~   76 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFD--------------------IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLA   76 (169)
T ss_pred             cccCCCCHHHHHHHcCCHH--------------------HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHH
Confidence            3467888999888776653                    333332      3468899999999999999999998    


Q ss_pred             HhHHHhHHhcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHH
Q 002539          726 DWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRERTVASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGY  803 (911)
Q Consensus       726 ~eiVklLLe~GAdvN~~D~-~G~TPLH~Aa~~G~~eiVklLL~-~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvkl  803 (911)
                      .+++++|+++|+++|.+|. .|+||||+|+..++.++|++||+ .|++++.      +|..|+||||+|+..|+.+++++
T Consensus        77 ~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~  150 (169)
T PHA02741         77 AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQI  150 (169)
T ss_pred             HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHH
Confidence            5899999999999999995 99999999999999999999998 5999887      88999999999999999999999


Q ss_pred             HHHcCCC
Q 002539          804 LAESDLS  810 (911)
Q Consensus       804 LLe~G~~  810 (911)
                      |++.+.+
T Consensus       151 L~~~~~~  157 (169)
T PHA02741        151 LREIVAT  157 (169)
T ss_pred             HHHHHHH
Confidence            9998754

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.76  E-value=5.7e-18  Score=171.20  Aligned_cols=136  Identities=15%  Similarity=0.130  Sum_probs=120.3

Q ss_pred             CCCCCCcccCCCCcHHHHHHHcCCH----hHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q 002539          702 GGKGPCVLDHCGQGVLHFAAALGYD----WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT---VASLIALGAAPGA  774 (911)
Q Consensus       702 ~Gad~n~~D~~G~TpLH~AA~~G~~----eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~ei---VklLL~~GAd~na  774 (911)
                      +|++++..+.++.++||.||..|+.    +++++|++.|++++.+|..|+||||+||..|+.++   |++|++.|+++|.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            5678888899999999999999997    67778889999999999999999999999998654   8999999999988


Q ss_pred             CCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHH-cCCCCccccCcccCCCCCcHh-----hhcHHHHHHhhhcCCCCCCC
Q 002539          775 LSDPTPKY-PSGRTPADLASSIGHKGIAGYLAE-SDLSSALSAISLNKKDGDVAE-----VTGATAVQTVPQRCPTPVSD  847 (911)
Q Consensus       775 ~tDpn~~D-~~G~TPLhlAa~~G~~eIvklLLe-~G~~sh~adln~~D~~G~Ta~-----~~~~~~V~~Lle~ga~~~~~  847 (911)
                            +| ..|.||||+|+..|+.+++++|++ .|     ++++.+|..|.||.     .+..++++.|++.|++.+..
T Consensus        89 ------~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  157 (166)
T PHA02743         89 ------RELGTGNTLLHIAASTKNYELAEWLCRQLG-----VNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP  157 (166)
T ss_pred             ------CCCCCCCcHHHHHHHhCCHHHHHHHHhccC-----CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence                  77 589999999999999999999995 56     68999999999983     44568999999999987754


Q ss_pred             C
Q 002539          848 G  848 (911)
Q Consensus       848 ~  848 (911)
                      .
T Consensus       158 ~  158 (166)
T PHA02743        158 L  158 (166)
T ss_pred             c
Confidence            3

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.75  E-value=2.3e-18  Score=175.05  Aligned_cols=244  Identities=16%  Similarity=0.016  Sum_probs=170.2

Q ss_pred             cchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChHHHh-
Q 002539          538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN-  616 (911)
Q Consensus       538 ~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~TpL~~-  616 (911)
                      .-..+..+...|-++--..|++.    |....+..|..-+-.+.+.+.  +.++....++... .++.+|.+|+.+++. 
T Consensus        31 q~a~~~~~~~m~~t~p~~~l~~~----~s~~~~~lge~~~~~~~~s~n--sd~~v~s~~~~~~-~~~~t~p~g~~~~~v~  103 (296)
T KOG0502|consen   31 QIAELFEQVEMGTTEPRCALTAE----ISALRNALGESLLTVAVRSGN--SDVAVQSAQLDPD-AIDETDPEGWSALLVA  103 (296)
T ss_pred             HHHHHHHHhhccccchhHHHHHH----HHHHHHhcCCcccchhhhcCC--cHHHHHhhccCCC-CCCCCCchhhhhhhhc
Confidence            34456666677777766666543    223344556666667776663  5666432233322 234456778887753 


Q ss_pred             ---hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhH
Q 002539          617 ---LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ  692 (911)
Q Consensus       617 ---~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~  692 (911)
                         ++...+..++ .++..+..                      +.-.|+++..+.-..                    +
T Consensus       104 ap~~s~~k~sttltN~~rgnev----------------------s~~p~s~~slsVhql--------------------~  141 (296)
T KOG0502|consen  104 APCGSVDKVSTTLTNGARGNEV----------------------SLMPWSPLSLSVHQL--------------------H  141 (296)
T ss_pred             CCCCCcceeeeeecccccCCcc----------------------ccccCChhhHHHHHH--------------------H
Confidence               4444444333 22222111                      123455544332211                    1


Q ss_pred             HHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 002539          693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP  772 (911)
Q Consensus       693 ~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~  772 (911)
                        +-..++....-+|..|+.|.|||.||+..|++.+|++||+.||++++..+...|+|.+|++.|..+||++||.++.|+
T Consensus       142 --L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV  219 (296)
T KOG0502|consen  142 --LDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDV  219 (296)
T ss_pred             --HHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc
Confidence              111222234458999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH----hhhcHHHHHHhhhcCCC
Q 002539          773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA----EVTGATAVQTVPQRCPT  843 (911)
Q Consensus       773 na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta----~~~~~~~V~~Lle~ga~  843 (911)
                      |.      .|.+|-|||-+|++.||.+|++.|++.|     |+++..+..|.++    -..+..+|+.+++.-+.
T Consensus       220 Nv------yDwNGgTpLlyAvrgnhvkcve~Ll~sG-----Ad~t~e~dsGy~~mdlAValGyr~Vqqvie~h~l  283 (296)
T KOG0502|consen  220 NV------YDWNGGTPLLYAVRGNHVKCVESLLNSG-----ADVTQEDDSGYWIMDLAVALGYRIVQQVIEKHAL  283 (296)
T ss_pred             ce------eccCCCceeeeeecCChHHHHHHHHhcC-----CCcccccccCCcHHHHHHHhhhHHHHHHHHHHHH
Confidence            88      8899999999999999999999999999     7899999999865    23334577777766554

>PHA02741 hypothetical protein; Provisional

Probab=99.74  E-value=9.4e-18  Score=169.86  Aligned_cols=128  Identities=21%  Similarity=0.199  Sum_probs=112.9

Q ss_pred             CCcccCCCCcHHHHHHHcCCHhHHHhHHh------cCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGR----ERTVASLIALGAAPGAL  775 (911)
Q Consensus       706 ~n~~D~~G~TpLH~AA~~G~~eiVklLLe------~GAdvN~~D~~G~TPLH~Aa~~G~----~eiVklLL~~GAd~na~  775 (911)
                      ++.+|..|.||||+||..|+.++|+.|+.      .|++++.+|..|+||||+|+..|+    .+++++|+++|++++. 
T Consensus        14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~-   92 (169)
T PHA02741         14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA-   92 (169)
T ss_pred             hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence            45678899999999999999999999853      478999999999999999999999    5899999999999987 


Q ss_pred             CCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHHc-CCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhcCCCC
Q 002539          776 SDPTPKYP-SGRTPADLASSIGHKGIAGYLAES-DLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPTP  844 (911)
Q Consensus       776 tDpn~~D~-~G~TPLhlAa~~G~~eIvklLLe~-G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~ga~~  844 (911)
                           ++. .|+||||+|+..++.+++++|++. |     ++++.+|..|.||     ..+..++++.|++.++..
T Consensus        93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g-----~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPG-----IDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence                 774 899999999999999999999974 6     6899999999998     445568888888877653

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.74  E-value=9.7e-18  Score=194.34  Aligned_cols=229  Identities=15%  Similarity=0.143  Sum_probs=186.1

Q ss_pred             HHHHHHHcCCcHHHHHHHHCC-----CC------CCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCC
Q 002539          541 NCKWSCMFGEIEVPAEIVAGG-----VL------RCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC  609 (911)
Q Consensus       541 ~LH~Ac~~G~~eVV~~LL~~G-----ad------vn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~  609 (911)
                      -|--||..|+++.|+.||+.-     ..      .+..-.|..|.|.||.||.+|+  .++.  .+|+++.+-++..|..
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~--~~is--~llle~ea~ldl~d~k   81 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQ--NQIS--KLLLDYEALLDLCDTK   81 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCc--hHHH--HHHhcchhhhhhhhcc
Confidence            566799999999999998742     11      1112335679999999999997  6666  7889999999999999


Q ss_pred             CChHHHh----hHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHH
Q 002539          610 GDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQK  685 (911)
Q Consensus       610 G~TpL~~----~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~  685 (911)
                      |.+|||+    ++.+++++|+...+.....                     ..++.++||.++..++.+           
T Consensus        82 g~~plhlaaw~g~~e~vkmll~q~d~~na~---------------------~~e~~tplhlaaqhgh~d-----------  129 (854)
T KOG0507|consen   82 GILPLHLAAWNGNLEIVKMLLLQTDILNAV---------------------NIENETPLHLAAQHGHLE-----------  129 (854)
T ss_pred             CcceEEehhhcCcchHHHHHHhcccCCCcc---------------------cccCcCccchhhhhcchH-----------
Confidence            9999985    8899999877444332221                     156778888888777655           


Q ss_pred             HHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCC--------ccccCCCCCcHHHHHHHcC
Q 002539          686 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--------INFRDVNGWTALHWAAYCG  757 (911)
Q Consensus       686 a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAd--------vN~~D~~G~TPLH~Aa~~G  757 (911)
                               ++.+|+.+|+++-.+|..+.|+|-+|++.|..++|++|+.....        -..++..+-+|||+|+++|
T Consensus       130 ---------vv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakng  200 (854)
T KOG0507|consen  130 ---------VVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNG  200 (854)
T ss_pred             ---------HHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcc
Confidence                     78889999999999999999999999999999999999876221        2345678899999999999


Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          758 RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       758 ~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                      |.++++.|++.|.|+|..+       ..-|+||-|+.+|..++|.+|++.|.     +..++|.+|.|+
T Consensus       201 h~~~~~~ll~ag~din~~t-------~~gtalheaalcgk~evvr~ll~~gi-----n~h~~n~~~qta  257 (854)
T KOG0507|consen  201 HVECMQALLEAGFDINYTT-------EDGTALHEAALCGKAEVVRFLLEIGI-----NTHIKNQHGQTA  257 (854)
T ss_pred             hHHHHHHHHhcCCCccccc-------ccchhhhhHhhcCcchhhhHHHhhcc-----ccccccccchHH
Confidence            9999999999999999743       45699999999999999999999995     677888888887

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.74  E-value=2.5e-17  Score=180.94  Aligned_cols=132  Identities=15%  Similarity=0.078  Sum_probs=113.0

Q ss_pred             HHHHHHhCCCCCCccc----CCCCcHHHHHHHcCCHhHHHhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcC
Q 002539          695 LVQKAAEGGKGPCVLD----HCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALG  769 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D----~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~~G  769 (911)
                      +++.|+++|+++|.++    ..|.||||+|+..|+.+++++|+++||++|.++ ..|+||||+|+..|+.+++++|+++|
T Consensus        48 ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~G  127 (300)
T PHA02884         48 IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYG  127 (300)
T ss_pred             HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            8889999999999974    589999999999999999999999999999974 68999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh--hcHHHHHHhhhcCC
Q 002539          770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV--TGATAVQTVPQRCP  842 (911)
Q Consensus       770 Ad~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~--~~~~~V~~Lle~ga  842 (911)
                      |+++.      +|..|.||||+|+..++.+++.++...+          .+..+.+|..  +..++++.|+.++.
T Consensus       128 Adin~------kd~~G~TpL~~A~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~n~ei~~~Lish~v  186 (300)
T PHA02884        128 ADINI------QTNDMVTPIELALMICNNFLAFMICDNE----------ISNFYKHPKKILINFDILKILVSHFI  186 (300)
T ss_pred             CCCCC------CCCCCCCHHHHHHHhCChhHHHHhcCCc----------ccccccChhhhhccHHHHHHHHHHHH
Confidence            99988      8899999999999999999887665322          2334444432  35688888888776

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.72  E-value=1.4e-17  Score=165.42  Aligned_cols=132  Identities=17%  Similarity=0.129  Sum_probs=104.8

Q ss_pred             cCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHH-hCCCCCCcccCCCCcHHHHHHHcCCH---hHHHh
Q 002539          656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAA-EGGKGPCVLDHCGQGVLHFAAALGYD---WALEP  731 (911)
Q Consensus       656 ~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLl-e~Gad~n~~D~~G~TpLH~AA~~G~~---eiVkl  731 (911)
                      .+..+.++||.++..+++.      .++.  ..        ..+. ..+..++.+|..|+||||+||..|+.   +++++
T Consensus        13 ~d~~g~tpLh~A~~~g~~~------~l~~--~~--------~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~   76 (154)
T PHA02736         13 PDIEGENILHYLCRNGGVT------DLLA--FK--------NAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKL   76 (154)
T ss_pred             cCCCCCCHHHHHHHhCCHH------HHHH--HH--------HHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHH
Confidence            4578999999998866421      0000  00        0000 00112345688999999999999986   46889


Q ss_pred             HHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 002539          732 TTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       732 LLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~-~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~  809 (911)
                      |++.|+++|.+| ..|+||||+|+..|+.+++++||. .|++++.      +|..|+||||+|+..|+.+++++|+++|+
T Consensus        77 Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         77 LMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             HHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            999999999998 599999999999999999999998 5999887      88999999999999999999999999884

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.72  E-value=2.1e-17  Score=162.95  Aligned_cols=123  Identities=22%  Similarity=0.151  Sum_probs=104.4

Q ss_pred             HHHHHHhCCCC-CCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          695 LVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       695 Lv~lLle~Gad-~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                      .|+.|++..++ +|.+|.+|.||||-|+.+|+.+||+.||..||+++++...||||||-||..++.+++-+||++|||+|
T Consensus        78 eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVn  157 (228)
T KOG0512|consen   78 EVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVN  157 (228)
T ss_pred             HHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccc
Confidence            56667766666 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcCCCCccccCcccCCCCCcHh
Q 002539          774 ALSDPTPKYPSGRTPADLASSIGH-KGIAGYLAESDLSSALSAISLNKKDGDVAE  827 (911)
Q Consensus       774 a~tDpn~~D~~G~TPLhlAa~~G~-~eIvklLLe~G~~sh~adln~~D~~G~Ta~  827 (911)
                      +      ......||||+||...+ ...+.+|+-...    -..-.++..+.||.
T Consensus       158 A------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry----i~pg~~nn~eeta~  202 (228)
T KOG0512|consen  158 A------QTKGLLTPLHLAAGNRNSRDTLELLLHDRY----IHPGLKNNLEETAF  202 (228)
T ss_pred             c------cccccchhhHHhhcccchHHHHHHHhhccc----cChhhhcCccchHH
Confidence            9      55688999999999775 456666664332    24555666666663

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.71  E-value=3e-17  Score=190.30  Aligned_cols=228  Identities=19%  Similarity=0.171  Sum_probs=173.6

Q ss_pred             cCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChH
Q 002539          534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT  613 (911)
Q Consensus       534 ~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~Tp  613 (911)
                      .++.+.|.||.||+.|+.+++++|+++-+..+  ..+..|.+|||+|+.+|+  .+++  +.|+.++..+|+....|.||
T Consensus        45 qd~~gfTalhha~Lng~~~is~llle~ea~ld--l~d~kg~~plhlaaw~g~--~e~v--kmll~q~d~~na~~~e~~tp  118 (854)
T KOG0507|consen   45 QDYSGFTLLHHAVLNGQNQISKLLLDYEALLD--LCDTKGILPLHLAAWNGN--LEIV--KMLLLQTDILNAVNIENETP  118 (854)
T ss_pred             cCccchhHHHHHHhcCchHHHHHHhcchhhhh--hhhccCcceEEehhhcCc--chHH--HHHHhcccCCCcccccCcCc
Confidence            34467899999999999999999999988755  445779999999999996  5666  77888889999999999999


Q ss_pred             HHh----hHHHHHHHHhc-CCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHH
Q 002539          614 SEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK  688 (911)
Q Consensus       614 L~~----~~~~ivkLLl~-ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k  688 (911)
                      ||.    +|.+++.+|+. +++-...+                      ..+-+++-.++..+...       ..+.++.
T Consensus       119 lhlaaqhgh~dvv~~Ll~~~adp~i~n----------------------ns~~t~ldlA~qfgr~~-------Vvq~ll~  169 (854)
T KOG0507|consen  119 LHLAAQHGHLEVVFYLLKKNADPFIRN----------------------NSKETVLDLASRFGRAE-------VVQMLLQ  169 (854)
T ss_pred             cchhhhhcchHHHHHHHhcCCCccccC----------------------cccccHHHHHHHhhhhH-------HHHHHhh
Confidence            974    89999999884 44433222                      12223333333322221       1222222


Q ss_pred             HhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002539          689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL  768 (911)
Q Consensus       689 ~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~  768 (911)
                      .++   .+.++...|  -..++..+.+|||+|+.+|+.++++.|+++|.++|.....| |+||.|+.+|..++|++||+.
T Consensus       170 ~~~---~~~~~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~  243 (854)
T KOG0507|consen  170 KKF---PVQSSLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEI  243 (854)
T ss_pred             hcc---chhhcccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhh
Confidence            221   233344444  34577889999999999999999999999999999988776 899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHc---CcHHHHHHHHHcC
Q 002539          769 GAAPGALSDPTPKYPSGRTPADLASSI---GHKGIAGYLAESD  808 (911)
Q Consensus       769 GAd~na~tDpn~~D~~G~TPLhlAa~~---G~~eIvklLLe~G  808 (911)
                      |.+..+      +|.+|+|+|.+-...   -..+++.++.+..
T Consensus       244 gin~h~------~n~~~qtaldil~d~~~~~~~ei~ga~~~~~  280 (854)
T KOG0507|consen  244 GINTHI------KNQHGQTALDIIIDLQENRRYEIAGAVKNFE  280 (854)
T ss_pred             cccccc------ccccchHHHHHHHhcchhhhhhhhhhhhccc
Confidence            999888      899999999987664   4567887777654

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.69  E-value=5.6e-18  Score=199.52  Aligned_cols=281  Identities=15%  Similarity=-0.004  Sum_probs=210.6

Q ss_pred             cccCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCC
Q 002539          532 FLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD  611 (911)
Q Consensus       532 fl~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~  611 (911)
                      -++++++.+||-+|+--||..||..|+.+.+++. .-.|+.+.|+|-+||..|.  .+|+  ++|+..|++-..++....
T Consensus       784 ehrdkkgf~plImaatagh~tvV~~llk~ha~ve-aQsdrtkdt~lSlacsggr--~~vv--elLl~~gankehrnvsDy  858 (2131)
T KOG4369|consen  784 EHRDKKGFVPLIMAATAGHITVVQDLLKAHADVE-AQSDRTKDTMLSLACSGGR--TRVV--ELLLNAGANKEHRNVSDY  858 (2131)
T ss_pred             cccccccchhhhhhcccCchHHHHHHHhhhhhhh-hhcccccCceEEEecCCCc--chHH--HHHHHhhccccccchhhc
Confidence            3667889999999999999999999999999875 3447889999999999986  6676  899999999988888889


Q ss_pred             hHHHh----hHHHHHHHHh-cCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHH----hhcCCChHHHHHHH
Q 002539          612 ITSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLT----AEEKFSSEEVKEKL  682 (911)
Q Consensus       612 TpL~~----~~~~ivkLLl-~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~----~~~~~~~~~~~~~l  682 (911)
                      |||-+    +..+++++|+ .|+.++.......  ++..+       +...-.+.++-.+.+    .+-+......+...
T Consensus       859 tPlsla~Sggy~~iI~~llS~GseInSrtgSkl--gisPL-------mlatmngh~~at~~ll~~gsdiNaqIeTNrnTa  929 (2131)
T KOG4369|consen  859 TPLSLARSGGYTKIIHALLSSGSEINSRTGSKL--GISPL-------MLATMNGHQAATLSLLQPGSDINAQIETNRNTA  929 (2131)
T ss_pred             CchhhhcCcchHHHHHHHhhccccccccccccc--Ccchh-------hhhhhccccHHHHHHhcccchhccccccccccc
Confidence            99965    7889998877 7777766544211  11111       111111111111111    11111111112222


Q ss_pred             HHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccC--CCCCcHHHHHHHcCCHH
Q 002539          683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD--VNGWTALHWAAYCGRER  760 (911)
Q Consensus       683 l~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D--~~G~TPLH~Aa~~G~~e  760 (911)
                      |-.++-.+.. .++.+||...+++..+-+.|.|||+-+|..|++++-++||.+|||+|+--  ..-.|+|-+++..||..
T Consensus       930 ltla~fqgr~-evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~k 1008 (2131)
T KOG4369|consen  930 LTLALFQGRP-EVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTK 1008 (2131)
T ss_pred             eeeccccCcc-hHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchh
Confidence            2222222222 27888999999999999999999999999999999999999999999854  33459999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHH
Q 002539          761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQ  835 (911)
Q Consensus       761 iVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~  835 (911)
                      .|++||...|.+.+      +|++|+|+|-+|+..|+...+.+|++++     +|++..|+...++     ..+++++|+
T Consensus      1009 fv~~lln~~atv~v------~NkkG~T~Lwla~~Gg~lss~~il~~~~-----ad~d~qdnr~~S~~maafRKgh~~iVk 1077 (2131)
T KOG4369|consen 1009 FVPKLLNGDATVRV------PNKKGCTVLWLASAGGALSSCPILVSSV-----ADADQQDNRTNSRTMAAFRKGHFAIVK 1077 (2131)
T ss_pred             hhHHhhCCccceec------ccCCCCcccchhccCCccccchHHhhcc-----cChhhhhcccccccHHHHHhchhheec
Confidence            99999999998887      8999999999999999999999999877     6888888876655     344556665


Q ss_pred             Hhh
Q 002539          836 TVP  838 (911)
Q Consensus       836 ~Ll  838 (911)
                      ...
T Consensus      1078 ~mv 1080 (2131)
T KOG4369|consen 1078 KMV 1080 (2131)
T ss_pred             ccc
Confidence            554

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.69  E-value=5.1e-17  Score=175.46  Aligned_cols=140  Identities=24%  Similarity=0.230  Sum_probs=123.1

Q ss_pred             cCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCC-CCCCcccCCCCcHHHHHHHcC-----CHhHH
Q 002539          656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLHFAAALG-----YDWAL  729 (911)
Q Consensus       656 ~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~G-ad~n~~D~~G~TpLH~AA~~G-----~~eiV  729 (911)
                      .|.+|.|.||++....+++                    +|+.|++.| +++|.++.-|+||+++||..-     +..+|
T Consensus       264 aDsNGNTALHYsVSHaNF~--------------------VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV  323 (452)
T KOG0514|consen  264 ADSNGNTALHYAVSHANFD--------------------VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVV  323 (452)
T ss_pred             hcCCCCeeeeeeecccchH--------------------HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHH
Confidence            4578999999988877665                    788899888 789999999999999987643     46778


Q ss_pred             HhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002539          730 EPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       730 klLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G  808 (911)
                      ..|... .|||++- ..|+|+|++|+.+|+.++|+.||.+|||+|+      +|.+|-|+|+.||.+||++|+++||...
T Consensus       324 ~~LF~m-gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p  396 (452)
T KOG0514|consen  324 ERLFKM-GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVP  396 (452)
T ss_pred             HHHHhc-cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccC
Confidence            887776 4688875 5799999999999999999999999999998      8899999999999999999999999765


Q ss_pred             CCCccccCcccCCCCCcH
Q 002539          809 LSSALSAISLNKKDGDVA  826 (911)
Q Consensus       809 ~~sh~adln~~D~~G~Ta  826 (911)
                          .+|+.+.|.+|.|+
T Consensus       397 ----~cd~sLtD~DgSTA  410 (452)
T KOG0514|consen  397 ----SCDISLTDVDGSTA  410 (452)
T ss_pred             ----cccceeecCCCchh
Confidence                36999999999998

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.69  E-value=6.9e-17  Score=160.55  Aligned_cols=127  Identities=15%  Similarity=0.149  Sum_probs=106.0

Q ss_pred             CCcccCCCCcHHHHHHHcCCHhHHHhHHhcCC-------CccccCCCCCcHHHHHHHcCCH---HHHHHHHHcCCCCCCC
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGV-------NINFRDVNGWTALHWAAYCGRE---RTVASLIALGAAPGAL  775 (911)
Q Consensus       706 ~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GA-------dvN~~D~~G~TPLH~Aa~~G~~---eiVklLL~~GAd~na~  775 (911)
                      ++.+|..|.||||+||..|+  ++.+|+..++       .++.+|..|+||||+||..|+.   +++++|++.|++++. 
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~-   86 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING-   86 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc-
Confidence            45678899999999999998  4455443332       2445799999999999999987   468999999999987 


Q ss_pred             CCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHc-CCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhcCCCCC
Q 002539          776 SDPTPKY-PSGRTPADLASSIGHKGIAGYLAES-DLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPTPV  845 (911)
Q Consensus       776 tDpn~~D-~~G~TPLhlAa~~G~~eIvklLLe~-G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~ga~~~  845 (911)
                           +| ..|+||||+|+..|+.+++++|++. |     ++++.+|..|.||     ..+..++++.|++.|++..
T Consensus        87 -----~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g-----~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         87 -----KERVFGNTPLHIAVYTQNYELATWLCNQPG-----VNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             -----cCCCCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence                 76 5899999999999999999999974 5     6899999999988     3456699999999998753

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.68  E-value=1.1e-16  Score=180.78  Aligned_cols=148  Identities=24%  Similarity=0.279  Sum_probs=135.2

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      =++.|+..|+++|..+.+|.|+||-+|.-.+.++|++|+++|++||..|..||||||.|+.+|+..||++||.+||++.+
T Consensus        55 ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~a  134 (527)
T KOG0505|consen   55 EVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLA  134 (527)
T ss_pred             HHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhh
Confidence            35667888999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CC-----------------------------------------------------CCCCCCCCCCCHHHHHHHcCcHHHH
Q 002539          775 LS-----------------------------------------------------DPTPKYPSGRTPADLASSIGHKGIA  801 (911)
Q Consensus       775 ~t-----------------------------------------------------Dpn~~D~~G~TPLhlAa~~G~~eIv  801 (911)
                      ++                                                     +.+.++..|.|+||+|+.+|+.+++
T Consensus       135 vNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~  214 (527)
T KOG0505|consen  135 VNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVA  214 (527)
T ss_pred             ccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHH
Confidence            64                                                     3566777899999999999999999


Q ss_pred             HHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhcCCCCCCC
Q 002539          802 GYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPTPVSD  847 (911)
Q Consensus       802 klLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~ga~~~~~  847 (911)
                      ++|+++|     .+++++|.+||+|     ..+..++.+.|+++|++....
T Consensus       215 ~lLl~ag-----~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~  260 (527)
T KOG0505|consen  215 ALLLQAG-----YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAK  260 (527)
T ss_pred             HHHHHhc-----cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence            9999988     5899999999977     677789999999999986654

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.67  E-value=2.3e-16  Score=141.88  Aligned_cols=89  Identities=31%  Similarity=0.354  Sum_probs=81.6

Q ss_pred             HHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002539          717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG  796 (911)
Q Consensus       717 LH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G  796 (911)
                      ||+||..|+.+++++|++.|++++.    |.||||+||..|+.+++++|++.|++++.      +|..|+||||+|+..|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence            8999999999999999999999887    99999999999999999999999999887      8899999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCcccC
Q 002539          797 HKGIAGYLAESDLSSALSAISLNK  820 (911)
Q Consensus       797 ~~eIvklLLe~G~~sh~adln~~D  820 (911)
                      +.+++++|+++|     ++++.+|
T Consensus        71 ~~~~~~~Ll~~g-----~~~~~~n   89 (89)
T PF12796_consen   71 NLEIVKLLLEHG-----ADVNIRN   89 (89)
T ss_dssp             HHHHHHHHHHTT-----T-TTSS-
T ss_pred             CHHHHHHHHHcC-----CCCCCcC
Confidence            999999999988     5777765

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.66  E-value=6.8e-16  Score=169.69  Aligned_cols=123  Identities=13%  Similarity=0.036  Sum_probs=105.7

Q ss_pred             cccCCCCcH-HHHHHHcCCHhHHHhHHhcCCCccccC----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-
Q 002539          708 VLDHCGQGV-LHFAAALGYDWALEPTTVAGVNINFRD----VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPK-  781 (911)
Q Consensus       708 ~~D~~G~Tp-LH~AA~~G~~eiVklLLe~GAdvN~~D----~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~-  781 (911)
                      .+|..|+|+ ||.|+..|+.+++++||++||++|.++    ..|.||||+|+..|+.+++++|+++|||+|+      + 
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------~~  100 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------YA  100 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------cc
Confidence            478888875 566777799999999999999999984    6899999999999999999999999999987      4 


Q ss_pred             CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHhh-----hcHHHHHHhhhcC
Q 002539          782 YPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV-----TGATAVQTVPQRC  841 (911)
Q Consensus       782 D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~-----~~~~~V~~Lle~g  841 (911)
                      +..|.||||+|+..|+.+++++|+++|     ++++.+|..|.||..     +...++..+..++
T Consensus       101 ~~~g~TpLh~Aa~~~~~eivklLL~~G-----Adin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~  160 (300)
T PHA02884        101 EEAKITPLYISVLHGCLKCLEILLSYG-----ADINIQTNDMVTPIELALMICNNFLAFMICDNE  160 (300)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc
Confidence            357999999999999999999999888     799999999999843     5555665554433

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.65  E-value=2.9e-16  Score=164.89  Aligned_cols=115  Identities=28%  Similarity=0.270  Sum_probs=108.9

Q ss_pred             hCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 002539          701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTP  780 (911)
Q Consensus       701 e~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~  780 (911)
                      +..-|.|.-|..|.+||||||..|+..+|+.||.+|+.||..+....||||+||..||.+||..||+..+|+|+      
T Consensus        22 ~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna------   95 (448)
T KOG0195|consen   22 DTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA------   95 (448)
T ss_pred             CcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch------
Confidence            44567888999999999999999999999999999999999999999999999999999999999999999999      


Q ss_pred             CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          781 KYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       781 ~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                      .|..|.|||||||--|+..|++-|+..|     |.+++.++.|.||
T Consensus        96 vnehgntplhyacfwgydqiaedli~~g-----a~v~icnk~g~tp  136 (448)
T KOG0195|consen   96 VNEHGNTPLHYACFWGYDQIAEDLISCG-----AAVNICNKKGMTP  136 (448)
T ss_pred             hhccCCCchhhhhhhcHHHHHHHHHhcc-----ceeeecccCCCCc
Confidence            6789999999999999999999999888     6899999999988

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.57  E-value=5.9e-15  Score=155.10  Aligned_cols=202  Identities=20%  Similarity=0.240  Sum_probs=141.5

Q ss_pred             ccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHh
Q 002539          655 KDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV  734 (911)
Q Consensus       655 ~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe  734 (911)
                      ..|+.++.+||.++..+...                    +++.|+..|+.+|..+....||||+||..|+.++|..||+
T Consensus        29 ~gddhgfsplhwaakegh~a--------------------ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~   88 (448)
T KOG0195|consen   29 VGDDHGFSPLHWAAKEGHVA--------------------IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLS   88 (448)
T ss_pred             cccccCcchhhhhhhcccHH--------------------HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHH
Confidence            34578889999887766542                    8899999999999999999999999999999999999999


Q ss_pred             cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccc
Q 002539          735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS  814 (911)
Q Consensus       735 ~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~a  814 (911)
                      ..+|||+.+..|+||||+||..|...|++-|+.+||.+++      -|+.|.|||..|.-.-..-+.++--++|...+  
T Consensus        89 ~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~~n--  160 (448)
T KOG0195|consen   89 RKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN--  160 (448)
T ss_pred             HhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCCCC--
Confidence            9999999999999999999999999999999999999998      78999999998854433334444444553211  


Q ss_pred             cCcccCC--CCC-c----H---hhhcHHH--HHHhhhcCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHh-cch
Q 002539          815 AISLNKK--DGD-V----A---EVTGATA--VQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFR-SRP  881 (911)
Q Consensus       815 dln~~D~--~G~-T----a---~~~~~~~--V~~Lle~ga~~~~~~~~~~~lsLkdsLaAvr~AaqAAarIq~afR-Sf~  881 (911)
                      .+-.+|.  .|. |    +   ...+.++  ..++.+.... .+.........-.|..+.+-+..+..+||..-|. .|.
T Consensus       161 ripfkdt~wkgtktr~rdatlsr~~gid~~~lnl~tkl~e~-hsgelwrgrwqgndivakil~vr~~t~risrdfneefp  239 (448)
T KOG0195|consen  161 RIPFKDTTWKGTKTRTRDATLSRYTGIDVSSLNLITKLAES-HSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFP  239 (448)
T ss_pred             cccccccccccccccccccccccccCcchhhhhhhhhhccC-CCcccccccccCcchhhhhhhhhhcchhhcchhhhhCc
Confidence            2223333  121 1    0   1111111  1111111111 1111212222333556677777888899988888 777


Q ss_pred             hhhH
Q 002539          882 RSQV  885 (911)
Q Consensus       882 rk~~  885 (911)
                      +-++
T Consensus       240 ~lri  243 (448)
T KOG0195|consen  240 ALRI  243 (448)
T ss_pred             ceee
Confidence            6543

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.54  E-value=3.1e-14  Score=128.05  Aligned_cols=76  Identities=33%  Similarity=0.363  Sum_probs=70.9

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +++.|++.+.+++.    |.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus        12 ~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~   87 (89)
T PF12796_consen   12 ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNI   87 (89)
T ss_dssp             HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred             HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            78888999988876    99999999999999999999999999999999999999999999999999999999999987

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.53  E-value=3.3e-14  Score=140.54  Aligned_cols=100  Identities=28%  Similarity=0.294  Sum_probs=93.2

Q ss_pred             HHHHHHHcCCHhHHHhHHhcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 002539          716 VLHFAAALGYDWALEPTTVAGVN-INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS  794 (911)
Q Consensus       716 pLH~AA~~G~~eiVklLLe~GAd-vN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~  794 (911)
                      .+-+|+..+....|+.||+..++ ||.+|.+|+||||-|+++|+.+||+.||..||++++      +...|+||||-||+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a------~T~~GWTPLhSAck  139 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA------KTNEGWTPLHSACK  139 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc------ccccCccchhhhhc
Confidence            46789999999999999998876 999999999999999999999999999999999998      66899999999999


Q ss_pred             cCcHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          795 IGHKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       795 ~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                      -.+.+|+.+||.+|     +|+|+..+...||
T Consensus       140 WnN~~va~~LLqhg-----aDVnA~t~g~ltp  166 (228)
T KOG0512|consen  140 WNNFEVAGRLLQHG-----ADVNAQTKGLLTP  166 (228)
T ss_pred             ccchhHHHHHHhcc-----Ccccccccccchh
Confidence            99999999999877     7999988887777

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.51  E-value=2.1e-13  Score=126.74  Aligned_cols=109  Identities=29%  Similarity=0.365  Sum_probs=93.4

Q ss_pred             cccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 002539          708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRT  787 (911)
Q Consensus       708 ~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~T  787 (911)
                      .+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.      .+..|.|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~   75 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNT   75 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCC
Confidence            3567789999999999999999999999998888899999999999999999999999999887665      6788889


Q ss_pred             HHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcHh
Q 002539          788 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE  827 (911)
Q Consensus       788 PLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta~  827 (911)
                      |+|+|+..++.+++++|++++     .+++..+..|.++.
T Consensus        76 ~l~~a~~~~~~~~~~~L~~~~-----~~~~~~~~~~~~~l  110 (126)
T cd00204          76 PLHLAARNGNLDVVKLLLKHG-----ADVNARDKDGRTPL  110 (126)
T ss_pred             HHHHHHHcCcHHHHHHHHHcC-----CCCcccCCCCCCHH
Confidence            999999999999999999877     46777777787763

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.51  E-value=1.8e-13  Score=127.15  Aligned_cols=122  Identities=30%  Similarity=0.334  Sum_probs=110.5

Q ss_pred             CcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCC
Q 002539          658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV  737 (911)
Q Consensus       658 ~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GA  737 (911)
                      ..++++|+.++..+...                    +++.|++.|.+.+.++..|.||||+|+..+..+++++|+..|+
T Consensus         5 ~~g~t~l~~a~~~~~~~--------------------~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~   64 (126)
T cd00204           5 EDGRTPLHLAASNGHLE--------------------VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA   64 (126)
T ss_pred             cCCCCHHHHHHHcCcHH--------------------HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            56778888877654432                    7788899999989999999999999999999999999999999


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Q 002539          738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA  805 (911)
Q Consensus       738 dvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLL  805 (911)
                      +++..+..|.||+|+|+..++.+++++|++.|.+++.      .+..|.||+++|...++.+++++|+
T Consensus        65 ~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          65 DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999999999999999999999988776      7889999999999999999999885

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.49  E-value=1.4e-13  Score=140.48  Aligned_cols=108  Identities=31%  Similarity=0.360  Sum_probs=101.7

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCC-----HhHHHhHHhcCC---CccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-----DWALEPTTVAGV---NINFRDVNGWTALHWAAYCGRERTVASLI  766 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~-----~eiVklLLe~GA---dvN~~D~~G~TPLH~Aa~~G~~eiVklLL  766 (911)
                      .+..++..|++++.+|..|.||||+|+..|+     .+++++||+.|+   ..+.+|..|+||||+|+..|+.++|++|+
T Consensus        88 ~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll  167 (235)
T COG0666          88 IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL  167 (235)
T ss_pred             HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHH
Confidence            4467889999999999999999999999999     999999999999   66667999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 002539          767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       767 ~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G  808 (911)
                      +.|++++.      ++..|.||++.|+..|+.++++.|++.+
T Consensus       168 ~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         168 EAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999887      7899999999999999999999999875

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.48  E-value=1.5e-13  Score=123.28  Aligned_cols=111  Identities=24%  Similarity=0.279  Sum_probs=91.7

Q ss_pred             HHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHc
Q 002539          716 VLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI  795 (911)
Q Consensus       716 pLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~  795 (911)
                      -+.|++.+|..+.|+..+..|.+||..- .|+||||+||.+|..+++++|+..||+++.      +|+.|-|||--|+..
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvwE   77 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVWE   77 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHHH
Confidence            4678889999999999998998888654 889999999999999999999999999887      889999999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCcccCCCCCcH-hhhcHHHHHHhh
Q 002539          796 GHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTVP  838 (911)
Q Consensus       796 G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-~~~~~~~V~~Ll  838 (911)
                      ||..||++|+..|     |+..++..+|.+. +....+.++.|+
T Consensus        78 GH~~cVklLL~~G-----Adrt~~~PdG~~~~eate~edIr~LL  116 (117)
T KOG4214|consen   78 GHRDCVKLLLQNG-----ADRTIHAPDGTALIEATEEEDIRELL  116 (117)
T ss_pred             hhHHHHHHHHHcC-----cccceeCCCchhHHhhccHHHHHHHh
Confidence            9999999999888     6788888888765 333334455544

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.43  E-value=5.6e-13  Score=157.26  Aligned_cols=197  Identities=18%  Similarity=0.089  Sum_probs=147.3

Q ss_pred             HHHHHHHcCCcHHHHHHHHCCC-------CCCCCCCCCCCChHHHHHHHcCCCcchHHHHHHHHhCCCCccccCCCCChH
Q 002539          541 NCKWSCMFGEIEVPAEIVAGGV-------LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT  613 (911)
Q Consensus       541 ~LH~Ac~~G~~eVV~~LL~~Ga-------dvn~~~~d~~G~TPLhvAa~nG~a~seVv~felLl~~GAdin~~D~~G~Tp  613 (911)
                      ++..|...|.++....|+..+-       +-....+-..|.|.||+|.-+..   +                        
T Consensus       104 ~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~---~------------------------  156 (782)
T KOG3676|consen  104 ALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLS---D------------------------  156 (782)
T ss_pred             hhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCc---h------------------------
Confidence            7888888999988888888772       11222335668888888876532   1                        


Q ss_pred             HHhhHHHHHHHHhcCCCCCCCCCCCCchhhhHHHHHHHhhhccCCcchhHHHHHHhhcCCChHHHHHHHHHHHHHHhhHH
Q 002539          614 SENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV  693 (911)
Q Consensus       614 L~~~~~~ivkLLl~ga~v~~~~~~~~~~~~~~l~~~I~sl~~~d~~g~t~L~~a~~~~~~~~~~~~~~ll~~a~k~~l~~  693 (911)
                         ++.++++.|+.-..              +++..+.  ....-.|.++||.|+...+..                   
T Consensus       157 ---~~n~la~~LL~~~p--------------~lind~~--~~eeY~GqSaLHiAIv~~~~~-------------------  198 (782)
T KOG3676|consen  157 ---GHNELARVLLEIFP--------------KLINDIY--TSEEYYGQSALHIAIVNRDAE-------------------  198 (782)
T ss_pred             ---hHHHHHHHHHHHhH--------------HHhhhhh--hhHhhcCcchHHHHHHhccHH-------------------
Confidence               11122222221111              0111111  111246788888887754432                   


Q ss_pred             HHHHHHHhCCCCCCcc---------cC--------------CCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHH
Q 002539          694 WLVQKAAEGGKGPCVL---------DH--------------CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTAL  750 (911)
Q Consensus       694 ~Lv~lLle~Gad~n~~---------D~--------------~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPL  750 (911)
                       +|++|++.|||++++         |.              .|..||-+||..+..+++++|+++|||++++|.+|+|.|
T Consensus       199 -~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVL  277 (782)
T KOG3676|consen  199 -LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVL  277 (782)
T ss_pred             -HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHH
Confidence             889999999999875         11              367899999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002539          751 HWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       751 H~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~  807 (911)
                      |.-+..-..+|..++|++||+  .  .+..+|..|.|||.+|++.|.++|.+.+++.
T Consensus       278 H~lVi~~~~~My~~~L~~ga~--~--l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  278 HMLVIHFVTEMYDLALELGAN--A--LEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHHHHHHHHHHHHHHhcCCC--c--cccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999999999999999999  1  2334899999999999999999999999997

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.41  E-value=3.2e-12  Score=130.45  Aligned_cols=126  Identities=25%  Similarity=0.260  Sum_probs=111.6

Q ss_pred             CCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCC-----HHHHHHHHHcCC--CCCCCCCC
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-----ERTVASLIALGA--APGALSDP  778 (911)
Q Consensus       706 ~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~-----~eiVklLL~~GA--d~na~tDp  778 (911)
                      ....+..+.+++|.++..+...++++|+..|++++.+|..|.||||+|+..|+     .+++++||+.|+  +..     
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~-----  140 (235)
T COG0666          66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVN-----  140 (235)
T ss_pred             cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCc-----
Confidence            44567789999999999999999999999999999999999999999999999     999999999999  332     


Q ss_pred             CCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhcC
Q 002539          779 TPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRC  841 (911)
Q Consensus       779 n~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~g  841 (911)
                      +.+|..|.||||+|+..|+.+++++|++.|     ++++.++..|.|+     ..+..+.+..+++.+
T Consensus       141 ~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~-----~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         141 NLRDEDGNTPLHWAALNGDADIVELLLEAG-----ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             cccCCCCCchhHHHHHcCchHHHHHHHhcC-----CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            237999999999999999999999999988     6788888888877     455567777777765

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=4.7e-13  Score=149.92  Aligned_cols=108  Identities=29%  Similarity=0.302  Sum_probs=95.7

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      ||+.++..--|+...+..|.|+||-|+..||.+||++||+.|+|||+.|.+||||||+||.++++.|++.|++.||.+-+
T Consensus       565 lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA  644 (752)
T KOG0515|consen  565 LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA  644 (752)
T ss_pred             HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence            66666665568888999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCCCCCCHHHHHHH--cCcHHHHHHHHHc
Q 002539          775 LSDPTPKYPSGRTPADLASS--IGHKGIAGYLAES  807 (911)
Q Consensus       775 ~tDpn~~D~~G~TPLhlAa~--~G~~eIvklLLe~  807 (911)
                      -|     -.++.||...+-.  .|+.+|.+||...
T Consensus       645 sT-----lSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  645 ST-----LSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             ee-----cccccchhhhcchhhhhHHHHHHHHHHH
Confidence            32     3678999987743  6899999999753

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.39  E-value=1.1e-12  Score=159.74  Aligned_cols=85  Identities=31%  Similarity=0.391  Sum_probs=53.7

Q ss_pred             HHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002539          717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG  796 (911)
Q Consensus       717 LH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G  796 (911)
                      ||.||..|+.++|++|++.|+++|.+|..|+||||+||..|+.++|++||++|++++.      +|..|.||||+|+..|
T Consensus        86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~~g  159 (664)
T PTZ00322         86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEENG  159 (664)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCC
Confidence            5566666666666666666666666666666666666666666666666666666555      5556666666666666


Q ss_pred             cHHHHHHHHHc
Q 002539          797 HKGIAGYLAES  807 (911)
Q Consensus       797 ~~eIvklLLe~  807 (911)
                      +.+++++|+++
T Consensus       160 ~~~iv~~Ll~~  170 (664)
T PTZ00322        160 FREVVQLLSRH  170 (664)
T ss_pred             cHHHHHHHHhC
Confidence            66666666655

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.38  E-value=3.7e-13  Score=111.90  Aligned_cols=55  Identities=40%  Similarity=0.577  Sum_probs=26.2

Q ss_pred             HHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 002539          732 TTVAG-VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA  792 (911)
Q Consensus       732 LLe~G-AdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlA  792 (911)
                      ||++| +++|.+|..|.||||+||..|+.++|++||+.|+|+++      +|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence            56666 77777777777777777777777777777777777766      677777777776

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.33  E-value=1.8e-12  Score=116.37  Aligned_cols=87  Identities=28%  Similarity=0.292  Sum_probs=77.1

Q ss_pred             HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002539          699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDP  778 (911)
Q Consensus       699 Lle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDp  778 (911)
                      ....|.++|.. ..|++|||+||-.|...++++|+..||+|+.+|+.|-|||.-|+..||.++|++||+.|||-..    
T Consensus        21 ~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~----   95 (117)
T KOG4214|consen   21 SVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTI----   95 (117)
T ss_pred             HHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccce----
Confidence            34445677744 4899999999999999999999999999999999999999999999999999999999999776    


Q ss_pred             CCCCCCCCCHHHHH
Q 002539          779 TPKYPSGRTPADLA  792 (911)
Q Consensus       779 n~~D~~G~TPLhlA  792 (911)
                        +.++|.+.+..+
T Consensus        96 --~~PdG~~~~eat  107 (117)
T KOG4214|consen   96 --HAPDGTALIEAT  107 (117)
T ss_pred             --eCCCchhHHhhc
Confidence              778888877654

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.32  E-value=8.9e-12  Score=147.25  Aligned_cols=121  Identities=21%  Similarity=0.199  Sum_probs=110.2

Q ss_pred             CCCCcHHHHHHHcCCHhHHHhHHhcCCCcccc---------CC--------------CCCcHHHHHHHcCCHHHHHHHHH
Q 002539          711 HCGQGVLHFAAALGYDWALEPTTVAGVNINFR---------DV--------------NGWTALHWAAYCGRERTVASLIA  767 (911)
Q Consensus       711 ~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~---------D~--------------~G~TPLH~Aa~~G~~eiVklLL~  767 (911)
                      ..|+||||+|+.+.+.++|++||+.||||++|         |.              .|..||-+||..+..+||++|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            47999999999999999999999999999986         21              47789999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHhhhc
Q 002539          768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQR  840 (911)
Q Consensus       768 ~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~Lle~  840 (911)
                      +|||+++      +|..|+|.||..+..-..++-.+++++|+.   +...++|+.|-||     ..+..++.+.++++
T Consensus       262 ~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L~~ga~---~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  262 HGADPNA------QDSNGNTVLHMLVIHFVTEMYDLALELGAN---ALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             cCCCCCc------cccCCChHHHHHHHHHHHHHHHHHHhcCCC---ccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9999988      999999999999999999999999999954   5588999999988     56677899999998

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.31  E-value=3.1e-12  Score=105.22  Aligned_cols=54  Identities=35%  Similarity=0.411  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 002539          713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLI  766 (911)
Q Consensus       713 G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL  766 (911)
                      |+||||+||..|+.+++++|+++|+++|.+|.+|+||||+||.+|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            455555555555555555555555555555555555555555555555555554

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.31  E-value=1.3e-12  Score=108.50  Aligned_cols=55  Identities=31%  Similarity=0.384  Sum_probs=33.7

Q ss_pred             HHhCC-CCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHH
Q 002539          699 AAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA  753 (911)
Q Consensus       699 Lle~G-ad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~A  753 (911)
                      |+++| +++|.+|..|.||||+||..|+.++|++||+.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            46667 89999999999999999999999999999999999999999999999998

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.30  E-value=7e-12  Score=132.40  Aligned_cols=97  Identities=26%  Similarity=0.266  Sum_probs=90.4

Q ss_pred             CCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002539          704 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY  782 (911)
Q Consensus       704 ad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~-D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D  782 (911)
                      -++|.+|..|+|+|..|+..|+.++|++||+.|+|||.. +..++||||+||..|+.++.++||+.||.+..      .|
T Consensus        36 r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~------vN  109 (396)
T KOG1710|consen   36 RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYL------VN  109 (396)
T ss_pred             hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccc------cc
Confidence            358999999999999999999999999999999999974 57799999999999999999999999999988      67


Q ss_pred             CCCCCHHHHHHHcCcHHHHHHHHH
Q 002539          783 PSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       783 ~~G~TPLhlAa~~G~~eIvklLLe  806 (911)
                      .-|+|+..+|+--||.++|.++-.
T Consensus       110 svgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen  110 SVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             chhhhHHHHHHHhcchHHHHHHhc
Confidence            899999999999999999998754

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.28  E-value=6.3e-12  Score=103.33  Aligned_cols=54  Identities=39%  Similarity=0.559  Sum_probs=46.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Q 002539          746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA  805 (911)
Q Consensus       746 G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLL  805 (911)
                      |+||||+||..|+.+++++|++.|++++.      +|..|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence            79999999999999999999999999888      7899999999999999999999996

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.26  E-value=1.3e-11  Score=150.27  Aligned_cols=93  Identities=26%  Similarity=0.222  Sum_probs=85.7

Q ss_pred             HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc------
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL------  768 (911)
Q Consensus       695 Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~------  768 (911)
                      .++.|++.|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++|+++      
T Consensus        97 ~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~  176 (664)
T PTZ00322         97 GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFE  176 (664)
T ss_pred             HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccc
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999998      


Q ss_pred             -CCCCCCCCCCCCCCCCCCCHHHHHH
Q 002539          769 -GAAPGALSDPTPKYPSGRTPADLAS  793 (911)
Q Consensus       769 -GAd~na~tDpn~~D~~G~TPLhlAa  793 (911)
                       |++++.      .+..|.+|+..+.
T Consensus       177 ~ga~~~~------~~~~g~~~~~~~~  196 (664)
T PTZ00322        177 LGANAKP------DSFTGKPPSLEDS  196 (664)
T ss_pred             cCCCCCc------cccCCCCccchhh
Confidence             555544      7788888877665

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.17  E-value=7.2e-11  Score=132.72  Aligned_cols=86  Identities=28%  Similarity=0.182  Sum_probs=81.9

Q ss_pred             HHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCc
Q 002539          718 HFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH  797 (911)
Q Consensus       718 H~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~  797 (911)
                      .-|+..|-.++|+-++..--|+...+..|-||||-|++.||.+||++||+.|+++|+      .|.+||||||+|+.+++
T Consensus       555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCNn  628 (752)
T KOG0515|consen  555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCNN  628 (752)
T ss_pred             HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcCc
Confidence            447888999999999999889999999999999999999999999999999999998      89999999999999999


Q ss_pred             HHHHHHHHHcCC
Q 002539          798 KGIAGYLAESDL  809 (911)
Q Consensus       798 ~eIvklLLe~G~  809 (911)
                      .-+++.|++.|+
T Consensus       629 v~~ckqLVe~Ga  640 (752)
T KOG0515|consen  629 VPMCKQLVESGA  640 (752)
T ss_pred             hHHHHHHHhccc
Confidence            999999999995

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.08  E-value=4.1e-10  Score=119.25  Aligned_cols=115  Identities=23%  Similarity=0.185  Sum_probs=100.0

Q ss_pred             CCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 002539          713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA  792 (911)
Q Consensus       713 G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlA  792 (911)
                      -..||.-+...|..+....||+.--++|.+|..|+|+|..|+++|+.++|++||+.|||+|..     ++..+.||||+|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----qhg~~YTpLmFA   86 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----QHGTLYTPLMFA   86 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----cccccccHHHHH
Confidence            467899999999999999999887779999999999999999999999999999999999973     668899999999


Q ss_pred             HHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH-----hhhcHHHHHHh
Q 002539          793 SSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTV  837 (911)
Q Consensus       793 a~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta-----~~~~~~~V~~L  837 (911)
                      +..|+.++.++|++.|     +.+.+.|.-|+|+     .+++-+.|..+
T Consensus        87 ALSGn~dvcrllldaG-----a~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   87 ALSGNQDVCRLLLDAG-----ARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             HHcCCchHHHHHHhcc-----CccccccchhhhHHHHHHHhcchHHHHHH
Confidence            9999999999999999     5678888888876     34444444443

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.80  E-value=2.6e-09  Score=125.31  Aligned_cols=83  Identities=27%  Similarity=0.363  Sum_probs=79.2

Q ss_pred             CCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPS  784 (911)
Q Consensus       706 ~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~-~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~  784 (911)
                      .|.+|..|+|+||+|+..|...+++.||.+|++++.+|. .||||||-|.+.|+++++-+||++|+...+      +|++
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke  118 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE  118 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence            678999999999999999999999999999999999995 599999999999999999999999999888      8999


Q ss_pred             CCCHHHHHHH
Q 002539          785 GRTPADLASS  794 (911)
Q Consensus       785 G~TPLhlAa~  794 (911)
                      |..||.+-++
T Consensus       119 glsplq~~~r  128 (1267)
T KOG0783|consen  119 GLSPLQFLSR  128 (1267)
T ss_pred             CCCHHHHHhh
Confidence            9999998776

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.76  E-value=2.3e-08  Score=112.22  Aligned_cols=94  Identities=33%  Similarity=0.325  Sum_probs=85.8

Q ss_pred             cccCCCCcH------HHHHHHcCCHhHHHhHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 002539          708 VLDHCGQGV------LHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTP  780 (911)
Q Consensus       708 ~~D~~G~Tp------LH~AA~~G~~eiVklLLe~GAdvN~~D-~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~  780 (911)
                      .+|.+|.|.      ||..+..|+.+..--||..||++|+.+ ..|.||||.||+.|..--+++|+-+|||+++      
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a------  195 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA------  195 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC------
Confidence            456666654      899999999999999999999999988 5699999999999999999999999999998      


Q ss_pred             CCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002539          781 KYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       781 ~D~~G~TPLhlAa~~G~~eIvklLLe~  807 (911)
                      .|.+|.||+.||-..||.++++-|+|.
T Consensus       196 ~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  196 QDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            889999999999999999999988874

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.63  E-value=2.6e-08  Score=111.56  Aligned_cols=93  Identities=31%  Similarity=0.346  Sum_probs=85.1

Q ss_pred             cCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCH
Q 002539          710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL-GAAPGALSDPTPKYPSGRTP  788 (911)
Q Consensus       710 D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~-GAd~na~tDpn~~D~~G~TP  788 (911)
                      +.++.-++++||..|.+..++-+.-.|.|++.+|.+.+|+||.||..|++++|++||+. +.++      +++|..|+||
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~------~~kDRw~rtP  576 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP------DPKDRWGRTP  576 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCC------ChhhccCCCc
Confidence            45667789999999999999999999999999999999999999999999999999976 5554      4499999999


Q ss_pred             HHHHHHcCcHHHHHHHHHcC
Q 002539          789 ADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       789 LhlAa~~G~~eIvklLLe~G  808 (911)
                      |+-|...+|.+++++|-+.-
T Consensus       577 lDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  577 LDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             chHhHhcCcHHHHHHHHHHh
Confidence            99999999999999998765

>PF13606 Ank_3: Ankyrin repeat

Probab=98.61  E-value=4.3e-08  Score=71.30  Aligned_cols=30  Identities=43%  Similarity=0.442  Sum_probs=25.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          745 NGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       745 ~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +|+||||+||+.|+.++|++||++|+|+|+
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            588888998888888888888888888763

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.47  E-value=4.2e-07  Score=103.32  Aligned_cols=119  Identities=24%  Similarity=0.309  Sum_probs=100.1

Q ss_pred             HHHHHHHHHhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCC--ccccCCCCCcHHHHHHHcCC
Q 002539          681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRDVNGWTALHWAAYCGR  758 (911)
Q Consensus       681 ~ll~~a~k~~l~~~Lv~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAd--vN~~D~~G~TPLH~Aa~~G~  758 (911)
                      .++..++...+.. +.+ +-..|-++-.++.+..|.||+|+..|+-++|++||++|..  ++..|..|.|+||-|+..++
T Consensus       869 eil~av~~~D~~k-lqE-~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  869 EILRAVLSSDLMK-LQE-THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN  946 (1004)
T ss_pred             HHHHHHHhccHHH-HHH-HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence            3455555444332 222 3345667778999999999999999999999999999965  67889999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002539          759 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       759 ~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~  807 (911)
                      ..++.+|++.||..-.      .|..|.||-.-|-+.|..+++.||-.+
T Consensus       947 r~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  947 RAVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             hHHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999999999876      789999999999999999999999754

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.47  E-value=2e-07  Score=68.93  Aligned_cols=30  Identities=40%  Similarity=0.480  Sum_probs=25.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          745 NGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       745 ~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +|+||||+||..|+.++|++||++||++++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~   30 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA   30 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence            478888888888888888888888888877

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.42  E-value=4.8e-07  Score=91.60  Aligned_cols=66  Identities=38%  Similarity=0.420  Sum_probs=46.5

Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 002539          736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       736 GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~G-Ad~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~  807 (911)
                      +.+||++|..|||||++|+..|..+.|.+|+.+| +.+.+      .|..|.+++.+|-+.|+.++++.|.+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHH
Confidence            4567777777777777777777777777777777 66655      667777777777777777777777665

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.38  E-value=9.2e-07  Score=101.32  Aligned_cols=88  Identities=26%  Similarity=0.137  Sum_probs=57.0

Q ss_pred             HHHHHHcCCHhHHHhHHhcCCC--ccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 002539          717 LHFAAALGYDWALEPTTVAGVN--INF--RDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA  792 (911)
Q Consensus       717 LH~AA~~G~~eiVklLLe~GAd--vN~--~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlA  792 (911)
                      |.-|+....+..+-+||.+|..  +|.  -+.+|+||||+||..|++.+.++|+=+|+|+-+      +|..|+|||.||
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~ya  701 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYA  701 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhH
Confidence            4445555556666666666643  222  244566777777777777777777777776665      667777777777


Q ss_pred             HHcCcHHHHHHHHHcCCC
Q 002539          793 SSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       793 a~~G~~eIvklLLe~G~~  810 (911)
                      -..|..+|+.+|+.+|+.
T Consensus       702 r~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  702 RQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             hhcccHHHHHHHHHcCCC
Confidence            777777777777777765

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.36  E-value=7e-07  Score=102.04  Aligned_cols=68  Identities=25%  Similarity=0.319  Sum_probs=53.6

Q ss_pred             hCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 002539          701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL  768 (911)
Q Consensus       701 e~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~  768 (911)
                      +.+..++.+|..|.||||+|+..|+...++.|+.+||++-.+|.+||+|||-|+..|+..++..+|.+
T Consensus        43 ~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   43 KVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH  110 (560)
T ss_pred             hhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence            34455777888888888888888888888888888888888888888888888888888777776654

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.32  E-value=2.3e-07  Score=109.43  Aligned_cols=77  Identities=25%  Similarity=0.242  Sum_probs=72.5

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCc
Q 002539          739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS  817 (911)
Q Consensus       739 vN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D-~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln  817 (911)
                      .|.+|..|+|+||+|+..|..++++.||++|+|++.      +| ..|+||||-|...|+++++-+||.+|     +.+.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g-----~SL~  113 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKG-----RSLR  113 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcC-----CceE
Confidence            688999999999999999999999999999999988      66 47999999999999999999999888     6899


Q ss_pred             ccCCCCCcH
Q 002539          818 LNKKDGDVA  826 (911)
Q Consensus       818 ~~D~~G~Ta  826 (911)
                      ++|++|..|
T Consensus       114 i~Dkeglsp  122 (1267)
T KOG0783|consen  114 IKDKEGLSP  122 (1267)
T ss_pred             EecccCCCH
Confidence            999999887

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.31  E-value=1.1e-06  Score=100.60  Aligned_cols=93  Identities=25%  Similarity=0.283  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHhCCCC--CCc--ccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHH
Q 002539          679 KEKLVQKLLKEKLQVWLVQKAAEGGKG--PCV--LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA  754 (911)
Q Consensus       679 ~~~ll~~a~k~~l~~~Lv~lLle~Gad--~n~--~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa  754 (911)
                      ..+++.+...+.+.  .+-+|+.+|..  +|.  -+.+|+|+||+||..|++.+.++||.+|+|+-++|.+|+|||.||-
T Consensus       625 gqqLl~A~~~~Dl~--t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar  702 (749)
T KOG0705|consen  625 GQQLLRAVAAEDLQ--TAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR  702 (749)
T ss_pred             HHHHHHHHHHHHHH--HHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence            44555555555555  33457778754  332  3567899999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCC
Q 002539          755 YCGRERTVASLIALGAAPG  773 (911)
Q Consensus       755 ~~G~~eiVklLL~~GAd~n  773 (911)
                      ..|..+++.+||.+|+-..
T Consensus       703 ~a~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  703 QAGSQECIDVLLQYGCPDE  721 (749)
T ss_pred             hcccHHHHHHHHHcCCCcc
Confidence            9999999999999998643

>PF13606 Ank_3: Ankyrin repeat

Probab=98.29  E-value=6.8e-07  Score=64.99  Aligned_cols=30  Identities=27%  Similarity=0.245  Sum_probs=28.5

Q ss_pred             CCCcHHHHHHHcCCHhHHHhHHhcCCCccc
Q 002539          712 CGQGVLHFAAALGYDWALEPTTVAGVNINF  741 (911)
Q Consensus       712 ~G~TpLH~AA~~G~~eiVklLLe~GAdvN~  741 (911)
                      +|+||||+||..|+.++|++||++|+|||.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999984

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.28  E-value=7.9e-07  Score=65.74  Aligned_cols=33  Identities=33%  Similarity=0.341  Sum_probs=31.3

Q ss_pred             CCCcHHHHHHHcCCHhHHHhHHhcCCCccccCC
Q 002539          712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDV  744 (911)
Q Consensus       712 ~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~  744 (911)
                      +|+||||+||..|+.++|++||++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            589999999999999999999999999999874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.18  E-value=3.3e-06  Score=96.65  Aligned_cols=87  Identities=28%  Similarity=0.289  Sum_probs=74.5

Q ss_pred             cHHHHHHHcCCHhHHHhHH--hcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 002539          715 GVLHFAAALGYDWALEPTT--VAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA  792 (911)
Q Consensus       715 TpLH~AA~~G~~eiVklLL--e~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlA  792 (911)
                      -|||+++.....+-+..++  +.+..|+.+|..|.||||+|+.-|+.+.++.||.+||++..      +|+.|++|||-|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA   95 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA   95 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence            4599999887766555433  34677999999999999999999999999999999999888      999999999999


Q ss_pred             HHcCcHHHHHHHHHc
Q 002539          793 SSIGHKGIAGYLAES  807 (911)
Q Consensus       793 a~~G~~eIvklLLe~  807 (911)
                      +..|+..++..++.+
T Consensus        96 v~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   96 VSTGNEQIITEVLRH  110 (560)
T ss_pred             HHcCCHHHHHHHHHH
Confidence            999999877766644

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.17  E-value=1.4e-06  Score=98.05  Aligned_cols=77  Identities=23%  Similarity=0.058  Sum_probs=69.7

Q ss_pred             HHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 002539          696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP  772 (911)
Q Consensus       696 v~lLle~Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~-GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~  772 (911)
                      ++.+.-.|.|++.+|.+.+|+||.||..|++++|++||+. +++++.+|..|+|||--|...+|.+++++|-++-.-.
T Consensus       522 lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~~y  599 (622)
T KOG0506|consen  522 LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQYPY  599 (622)
T ss_pred             HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhccc
Confidence            4445556899999999999999999999999999999986 8999999999999999999999999999998875543

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.14  E-value=1.7e-06  Score=106.34  Aligned_cols=98  Identities=30%  Similarity=0.345  Sum_probs=86.7

Q ss_pred             CCCCCCc--ccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 002539          702 GGKGPCV--LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPT  779 (911)
Q Consensus       702 ~Gad~n~--~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn  779 (911)
                      +++++|.  .-..|.|+||.|+..|..-++++|+..|+++|.+|..|+||||.+...|+...+.+|+++||++++     
T Consensus       643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a-----  717 (785)
T KOG0521|consen  643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA-----  717 (785)
T ss_pred             chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc-----
Confidence            3444443  335789999999999999999999999999999999999999999999999999999999999988     


Q ss_pred             CCCCCCCCHHHHHHHcCcHHHHHHHH
Q 002539          780 PKYPSGRTPADLASSIGHKGIAGYLA  805 (911)
Q Consensus       780 ~~D~~G~TPLhlAa~~G~~eIvklLL  805 (911)
                       .+.+|.+||++|....+.+++-+|.
T Consensus       718 -~~~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  718 -FDPDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             -cCccCcchhhHHhhhccccHHHHHh
Confidence             8899999999998887777766654

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.07  E-value=4.5e-05  Score=91.93  Aligned_cols=100  Identities=19%  Similarity=0.047  Sum_probs=85.7

Q ss_pred             CCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCC
Q 002539          704 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG----ALSDPT  779 (911)
Q Consensus       704 ad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~n----a~tDpn  779 (911)
                      .++|.+|.-|+++||+|..+-+.+++++|++++..+       .-+|.+|+..|..++|++||.+-....    ..++..
T Consensus        53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~  125 (822)
T KOG3609|consen   53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANS  125 (822)
T ss_pred             cchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCc
Confidence            478999999999999999999999999999998776       348999999999999999998754431    122344


Q ss_pred             CCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 002539          780 PKYPSGRTPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       780 ~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~  810 (911)
                      +....+-|||.+||..++.||+++|+.+|.+
T Consensus       126 ~~ft~ditPliLAAh~NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen  126 PHFTPDITPLMLAAHLNNFEILQCLLTRGHC  156 (822)
T ss_pred             ccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence            5667889999999999999999999999965

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.02  E-value=1.9e-05  Score=89.47  Aligned_cols=85  Identities=19%  Similarity=0.203  Sum_probs=71.2

Q ss_pred             HHHHHHHhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHH
Q 002539          683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT  761 (911)
Q Consensus       683 l~~a~k~~l~~~Lv~lLle~Gad~n~~D~-~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~ei  761 (911)
                      |+..++....+..+ .|+..|+++|..+. .|.||||.||..|..--+++|+-+|||+++.|.+|+||+-+|-..||-++
T Consensus       137 LhasvRt~nlet~L-Rll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  137 LHSSVRTGNLETCL-RLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHhhcccHHHHH-HHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            44444444444333 45678999998875 79999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHc
Q 002539          762 VASLIAL  768 (911)
Q Consensus       762 VklLL~~  768 (911)
                      .+-|++.
T Consensus       216 aeRl~e~  222 (669)
T KOG0818|consen  216 AERLVEI  222 (669)
T ss_pred             HHHHHHH
Confidence            8877764

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.98  E-value=1.9e-05  Score=87.08  Aligned_cols=84  Identities=25%  Similarity=0.174  Sum_probs=67.7

Q ss_pred             CcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 002539          714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS  793 (911)
Q Consensus       714 ~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa  793 (911)
                      ..-|..||+.|..+.|++|++.|++||.+|.....||.+|+.+||+++|++||++||-...      -.-+|.-++ +++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r------dtf~G~RC~-Yga  109 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR------DTFDGDRCH-YGA  109 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc------cccCcchhh-hhh
Confidence            5568999999999999999999999999999999999999999999999999999997654      223565554 444


Q ss_pred             HcCcHHHHHHHHH
Q 002539          794 SIGHKGIAGYLAE  806 (911)
Q Consensus       794 ~~G~~eIvklLLe  806 (911)
                      -+  ..|-++|+.
T Consensus       110 Ln--d~IR~mlls  120 (516)
T KOG0511|consen  110 LN--DRIRRMLLS  120 (516)
T ss_pred             hh--HHHHHHHHH
Confidence            43  233444443

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.87  E-value=2.4e-05  Score=79.55  Aligned_cols=72  Identities=21%  Similarity=0.094  Sum_probs=66.9

Q ss_pred             CCCCCcccCCCCcHHHHHHHcCCHhHHHhHHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 002539          703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       703 Gad~n~~D~~G~TpLH~AA~~G~~eiVklLLe~G-AdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na  774 (911)
                      +.++|++|..|+|+|++||..|..++|.+|+.+| +.|...|..|.+++.+|-+.|+.++|..|.++-.+-..
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~   74 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH   74 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence            4589999999999999999999999999999999 89999999999999999999999999999998655433

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=97.86  E-value=2.9e-05  Score=88.74  Aligned_cols=104  Identities=15%  Similarity=0.203  Sum_probs=84.3

Q ss_pred             HHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002539          717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG  796 (911)
Q Consensus       717 LH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G  796 (911)
                      |.-|+..+..--+.-+-.+|.++-.++.+-.|-||+|+..|+-+||++||++|..- +   .+..|..|.|+||-|+..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~e-l---ld~~de~get~lhkaa~~~  945 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE-L---LDMADETGETALHKAACQR  945 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH-H---HHHHhhhhhHHHHHHHHhc
Confidence            34455555544444455578889999999999999999999999999999998752 1   1236789999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCcccCCCCCcHhhh
Q 002539          797 HKGIAGYLAESDLSSALSAISLNKKDGDVAEVT  829 (911)
Q Consensus       797 ~~eIvklLLe~G~~sh~adln~~D~~G~Ta~~~  829 (911)
                      +..+..+|++.|     +.+.-.|..|.||...
T Consensus       946 ~r~vc~~lvdag-----asl~ktd~kg~tp~er  973 (1004)
T KOG0782|consen  946 NRAVCQLLVDAG-----ASLRKTDSKGKTPQER  973 (1004)
T ss_pred             chHHHHHHHhcc-----hhheecccCCCChHHH
Confidence            999999999999     6788899999998543

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.74  E-value=8.7e-05  Score=82.02  Aligned_cols=81  Identities=23%  Similarity=0.209  Sum_probs=65.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccccCcccCCCCCcH
Q 002539          747 WTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA  826 (911)
Q Consensus       747 ~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh~adln~~D~~G~Ta  826 (911)
                      .--|..||+.|..+.|+.|++.|.++|+      .|.....||.+|+-.||..+|++|+++|+.     +.--.-+|.-+
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~------vD~fD~spL~lAsLcGHe~vvklLLenGAi-----C~rdtf~G~RC  105 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNA------VDRFDSSPLYLASLCGHEDVVKLLLENGAI-----CSRDTFDGDRC  105 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcch------hhcccccHHHHHHHcCcHHHHHHHHHcCCc-----ccccccCcchh
Confidence            4468999999999999999999999988      789999999999999999999999999952     33333367777


Q ss_pred             hhhcH--HHHHHhh
Q 002539          827 EVTGA--TAVQTVP  838 (911)
Q Consensus       827 ~~~~~--~~V~~Ll  838 (911)
                      ..++.  .+-++|+
T Consensus       106 ~YgaLnd~IR~mll  119 (516)
T KOG0511|consen  106 HYGALNDRIRRMLL  119 (516)
T ss_pred             hhhhhhHHHHHHHH
Confidence            66654  3444443

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.69  E-value=6.1e-05  Score=92.53  Aligned_cols=98  Identities=22%  Similarity=0.199  Sum_probs=82.7

Q ss_pred             CCcccCCCCcHHHHHHHcCCHhHHHhHHhc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCCC
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRERTVASLI-ALGAAPGALSDPTPKYP  783 (911)
Q Consensus       706 ~n~~D~~G~TpLH~AA~~G~~eiVklLLe~-GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL-~~GAd~na~tDpn~~D~  783 (911)
                      .......|+|.||+++..++.|+++.+++- |......|.+|.-.+|+ |..++.+++.+|+ -.|..++.      +|.
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i------~D~  639 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI------RDR  639 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc------ccC
Confidence            444567899999999999999999999996 77777788888888888 5666777766666 44777766      899


Q ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 002539          784 SGRTPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       784 ~G~TPLhlAa~~G~~eIvklLLe~G~~  810 (911)
                      .|+||||+|+..|+..++..|++.|+.
T Consensus       640 ~G~tpL~wAa~~G~e~l~a~l~~lga~  666 (975)
T KOG0520|consen  640 NGWTPLHWAAFRGREKLVASLIELGAD  666 (975)
T ss_pred             CCCcccchHhhcCHHHHHHHHHHhccc
Confidence            999999999999999999999988864

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.31  E-value=0.00016  Score=89.24  Aligned_cols=81  Identities=30%  Similarity=0.337  Sum_probs=71.4

Q ss_pred             cCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Q 002539          735 AGVNINFRD--VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSA  812 (911)
Q Consensus       735 ~GAdvN~~D--~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~eIvklLLe~G~~sh  812 (911)
                      +|+++|..+  ..|.|+||.|+..|..-++++||++|+++|.      +|..|+||||.+...|+...+..|+++|    
T Consensus       643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~------~d~~g~~plh~~~~~g~~~~~~~ll~~~----  712 (785)
T KOG0521|consen  643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNA------LDSKGRTPLHHATASGHTSIACLLLKRG----  712 (785)
T ss_pred             chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchh------hhccCCCcchhhhhhcccchhhhhcccc----
Confidence            455555432  4689999999999999999999999999988      8999999999999999999999999877    


Q ss_pred             cccCcccCCCCCcH
Q 002539          813 LSAISLNKKDGDVA  826 (911)
Q Consensus       813 ~adln~~D~~G~Ta  826 (911)
                       ++.++.+.+|..+
T Consensus       713 -a~~~a~~~~~~~~  725 (785)
T KOG0521|consen  713 -ADPNAFDPDGKLP  725 (785)
T ss_pred             -ccccccCccCcch
Confidence             6888888888766

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.67  E-value=0.0023  Score=73.35  Aligned_cols=71  Identities=28%  Similarity=0.351  Sum_probs=59.9

Q ss_pred             HhHHHhHHhcCCCcccc------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHH
Q 002539          726 DWALEPTTVAGVNINFR------DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKG  799 (911)
Q Consensus       726 ~eiVklLLe~GAdvN~~------D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhlAa~~G~~e  799 (911)
                      ...|++|.+++++.|++      +..--|+||+|+..|..++|.+||+.|+|+.+      +|..|+||.+++.   +.+
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd  474 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD  474 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence            67889999999988764      45577999999999999999999999998777      8999999999988   455


Q ss_pred             HHHHHH
Q 002539          800 IAGYLA  805 (911)
Q Consensus       800 IvklLL  805 (911)
                      |-..++
T Consensus       475 Vk~~F~  480 (591)
T KOG2505|consen  475 VKSIFI  480 (591)
T ss_pred             HHHHHH
Confidence            544444

>smart00248 ANK ankyrin repeats

Probab=96.64  E-value=0.003  Score=42.44  Aligned_cols=29  Identities=38%  Similarity=0.414  Sum_probs=21.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002539          745 NGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       745 ~G~TPLH~Aa~~G~~eiVklLL~~GAd~n  773 (911)
                      .|+||||+|+..|+.+++++|++.|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            36778888888888888888887777653

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=96.42  E-value=0.0062  Score=74.13  Aligned_cols=116  Identities=16%  Similarity=0.046  Sum_probs=91.9

Q ss_pred             HHHHHHHcCCHhHHHhHHhc----CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002539          716 VLHFAAALGYDWALEPTTVA----GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL  791 (911)
Q Consensus       716 pLH~AA~~G~~eiVklLLe~----GAdvN~~D~~G~TPLH~Aa~~G~~eiVklLL~~GAd~na~tDpn~~D~~G~TPLhl  791 (911)
                      -.-.||++|+.-.|+..++.    ..++|.+|.-|+++||+|..+.+.+++++|++.....             .-+|-+
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------------gdALL~   94 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------------GDALLL   94 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------------chHHHH
Confidence            45678999999999888875    2579999999999999999999999999999876543             458999


Q ss_pred             HHHcCcHHHHHHHHHcCCCCccccCcccCCC------CCcH-----hhhcHHHHHHhhhcCCCCC
Q 002539          792 ASSIGHKGIAGYLAESDLSSALSAISLNKKD------GDVA-----EVTGATAVQTVPQRCPTPV  845 (911)
Q Consensus       792 Aa~~G~~eIvklLLe~G~~sh~adln~~D~~------G~Ta-----~~~~~~~V~~Lle~ga~~~  845 (911)
                      |+..|..++|++|+.+....+.... ..|.+      +.||     ...+.++++.|+.+|+...
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~-~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLER-SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhcc-ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence            9999999999999987654433222 22222      3344     5667799999999999754

>smart00248 ANK ankyrin repeats

Probab=95.65  E-value=0.016  Score=38.77  Aligned_cols=29  Identities=31%  Similarity=0.281  Sum_probs=26.7

Q ss_pred             CCCcHHHHHHHcCCHhHHHhHHhcCCCcc
Q 002539          712 CGQGVLHFAAALGYDWALEPTTVAGVNIN  740 (911)
Q Consensus       712 ~G~TpLH~AA~~G~~eiVklLLe~GAdvN  740 (911)
                      .|.||||+|+..|+.++++.|+.+|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998775

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.50  E-value=0.025  Score=65.23  Aligned_cols=78  Identities=22%  Similarity=0.145  Sum_probs=60.5

Q ss_pred             HHHHhhHHHHHHHHHhCCCCCCc------ccCCCCcHHHHHHHcCCHhHHHhHHhcCCCccccCCCCCcHHHHHHHcCCH
Q 002539          686 LLKEKLQVWLVQKAAEGGKGPCV------LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE  759 (911)
Q Consensus       686 a~k~~l~~~Lv~lLle~Gad~n~------~D~~G~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~~G~TPLH~Aa~~G~~  759 (911)
                      .++.+-....++.|.+++++.|.      .+..--|+||+|+..|...+|.+||+.|+|+-.+|..|.||..+++   +.
T Consensus       397 ~lkk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nk  473 (591)
T KOG2505|consen  397 RLKKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NK  473 (591)
T ss_pred             HHhccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cH
Confidence            33443334577788888877754      3455679999999999999999999999999999999999999987   34


Q ss_pred             HHHHHHH
Q 002539          760 RTVASLI  766 (911)
Q Consensus       760 eiVklLL  766 (911)
                      ++-..++
T Consensus       474 dVk~~F~  480 (591)
T KOG2505|consen  474 DVKSIFI  480 (591)
T ss_pred             HHHHHHH
Confidence            4443343

>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors

Probab=93.69  E-value=0.011  Score=52.91  Aligned_cols=61  Identities=25%  Similarity=0.415  Sum_probs=51.2

Q ss_pred             EEEeeccccccCCCceEEEEEc-ccccCcccchHHHHHHHcCCcHHHHHHHHCCCCCCCCCC-CCCCChHH
Q 002539          509 SIIDFSPNWAYVSSEVKVLITG-RFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVPF  577 (911)
Q Consensus       509 sI~dfSP~wa~s~~~tKVlI~G-~fl~~~~~~T~LH~Ac~~G~~eVV~~LL~~Gadvn~~~~-d~~G~TPL  577 (911)
                      .|+.+.|.+++..++++|.|+| .|...        +.|+||...+-.+++...+.+|.+|+ +..|-+..
T Consensus         2 ~I~ai~P~eG~~tGGt~VtI~GenF~~g--------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~V   64 (85)
T cd01175           2 CIKAISPSEGWTTGGATVIIIGDNFFDG--------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEV   64 (85)
T ss_pred             cccEecCCCCcccCCeEEEEECCCCCCC--------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEE
Confidence            4889999999999999999999 56554        77999999988888888888888888 77775543

COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.

>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function

Probab=89.20  E-value=0.77  Score=55.48  Aligned_cols=104  Identities=21%  Similarity=0.398  Sum_probs=67.7

Q ss_pred             CChHHHHHHHhccccce-----eCcCCCCCCCCcceEe-ee--hhhhhhhcccCccceecCCCcchHhhhhhhccCCEee
Q 002539           27 LRPAEICEILRNYTKFR-----IAPESPHTPPSGSLFL-FD--RKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV   98 (911)
Q Consensus        27 ~~~~e~~~~l~~~~~~~-----~~~~~~~~p~~g~~~l-~~--r~~~~~fr~dg~~w~k~~~~~~~~e~h~~lk~~~~~~   98 (911)
                      |..++|+++|..--+.-     +.-.=..+|+-|+||| |-  -++.-.|-.|||.|.-       -|.--+..|+|..+
T Consensus        30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~l  102 (669)
T PF08549_consen   30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYTL  102 (669)
T ss_pred             CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeEE
Confidence            66677777777644321     1111246789999987 42  2445779999999974       25555556666553


Q ss_pred             --E---EEEeecccCCcccceeeeecccccc---------ccEEEEeeeeccC
Q 002539           99 --L---HCYYAHGEENENFQRRSYWMLEEEL---------SHIVLVHYREVKG  137 (911)
Q Consensus        99 --~---~~~y~~~~~~~~f~rr~y~~~~~~~---------~~~vlvhy~~~~~  137 (911)
                        .   ++|+-=+|.....-||.|-|+-...         -+.+||||..-..
T Consensus       103 Ei~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~  155 (669)
T PF08549_consen  103 EIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP  155 (669)
T ss_pred             EEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence              1   1233326778899999999995432         3589999987543

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=85.13  E-value=2.4  Score=45.24  Aligned_cols=93  Identities=13%  Similarity=0.077  Sum_probs=54.1

Q ss_pred             CcHHHHHHHcCCHhHHHhHHhcCCCccccCC----CCCcHHHHHHH--cCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCC
Q 002539          714 QGVLHFAAALGYDWALEPTTVAGVNINFRDV----NGWTALHWAAY--CGRERTVASLIALG-AAPGALSDPTPKYPSGR  786 (911)
Q Consensus       714 ~TpLH~AA~~G~~eiVklLLe~GAdvN~~D~----~G~TPLH~Aa~--~G~~eiVklLL~~G-Ad~na~tDpn~~D~~G~  786 (911)
                      .++|-+|..++..+++-+|+.+ -+...+|.    .+.--+-++..  .-...|.+.+|++| +++|.   +-.+-+.|.
T Consensus       180 ~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSGd  255 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSGD  255 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCcc
Confidence            3455566655666666666653 11111111    11112223222  23456777788777 44444   223456889


Q ss_pred             CHHHHHHHcCcHHHHHHHHHcCCC
Q 002539          787 TPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       787 TPLhlAa~~G~~eIvklLLe~G~~  810 (911)
                      |-|+-|.+.++.+++.+||++|++
T Consensus       256 tMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  256 TMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hHHHhHHhcCcHHHHHHHHHcCcc
Confidence            999999999999999999988864

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	911
2cxk_A	95	Crystal Structure Of The Tig Domain Of Human Calmod		1e-10
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-08
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-06
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		5e-06
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-05
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-05
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-05
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		3e-05
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		5e-05
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		2e-04
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-04
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-04
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		3e-04
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		6e-04
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		7e-04

>pdb|2CXK|A Chain A, Crystal Structure Of The Tig Domain Of Human Calmodulin- Binding Transcription Activator 1 (Camta1) Length = 95

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 510 IIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS 569
           + D+SP W+Y    VKVLITG +    QEA N  +SC+F +I VPA ++  GVLRC+  +
Sbjct: 9   VTDYSPEWSYPEGGVKVLITGPW----QEASN-NYSCLFDQISVPASLIQPGVLRCYCPA 63
Query: 570 QKVGRVPFYVTCSNRLSCSEVREFEYRA 597
              G V   V  +N++  + V  FEY++
Sbjct: 64  HDTGLVTLQVAFNNQIISNSVV-FEYKS 90

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E G  P   D  G+  LH+AA  G+   ++     G + N +D +G T LH+AA  G + 
Sbjct: 25  ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKE 84
Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
            V  L++ GA      DP  K   GRTP   A+  GHK I
Sbjct: 85  IVKLLLSKGA------DPNAKDSDGRTPLHYAAENGHKEI 118

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G+  LH AA  G+   ++     G + N +D +G T LH AA  G +  V  L++ G
Sbjct: 34  DSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQG 93
Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
           A      DP  K   G+TP  LA+  GHK +
Sbjct: 94  A------DPNAKDSDGKTPLHLAAENGHKEV 118

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768
           +D  G   LH AA+LG+   +E     G ++N +D  G T L+ AAY G    V  L+  
Sbjct: 64  VDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKH 123
Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
           GA      D   +   G+T  D++  IG++ +A
Sbjct: 124 GA------DVNAQDKFGKTAFDISIDIGNEDLA 150

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E G      D  G+  LH+AA  G+   ++     G ++N +D +G T LH+AA  G + 
Sbjct: 25  ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKE 84
Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
            V  LI+ GA      D   K   GRTP   A+  GHK I
Sbjct: 85  IVKLLISKGA------DVNAKDSDGRTPLHYAAKEGHKEI 118

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G   LH AA +G+   +E     G ++N RD +GWT LH AA  G    V  L+  G
Sbjct: 44  DDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYG 103
Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGH 797
           A      D   +   G TP  LA+  GH
Sbjct: 104 A------DVNAQDAYGLTPLHLAADRGH 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E G      D  G+  LH AA  G+   ++    AG ++N +D NG T LH AA  G   
Sbjct: 23  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82
Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH 797
            V  L+  GA      D   K  +GRTP  LA+  GH
Sbjct: 83  VVKLLLEAGA------DVNAKDKNGRTPLHLAARNGH 113

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G   LH AA  G+   +E    AG ++N +D +G+T LH AA  G    V  L+  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
           A      D   +   G+TP DLA   GH+ IA
Sbjct: 125 A------DVNAQDKFGKTPFDLAIREGHEDIA 150

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
           G+  LH AA  G+   ++    AG ++N +D NG T LH AA  G    V  L+  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-- 59
Query: 773 GALSDPTPKYPSGRTPADLASSIGH 797
               D   K  +GRTP  LA+  GH
Sbjct: 60  ----DVNAKDKNGRTPLHLAARNGH 80

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
           G   LH AAA GY   L+    A  ++N +D +GWT LH AA+ G+E     L+      
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE----- 253
Query: 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGY 803
             L D       G+T  D+A     + I GY
Sbjct: 254 -NLCDMEAVNKVGQTAFDVAD----EDILGY 279

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G   LH AA  G+   +E    AG ++N +D +G+T LH AA  G    V  L+  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
           A      D   +   G+TP DLA   G++ IA
Sbjct: 125 A------DVNAQDKFGKTPFDLAIDNGNEDIA 150

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E G      D  G+  LH AA  G+   ++     G ++N +D +G T LH AA  G + 
Sbjct: 25  ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84
Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
            V  LI+ GA      D   K   GRTP   A+  GHK +
Sbjct: 85  VVKLLISKGA------DVNAKDSDGRTPLHHAAENGHKEV 118

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G   LH AA  G+   +E    AG ++N +D +G+T LH AA  G    V  L+  G
Sbjct: 44  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 103
Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGH 797
           A      D   K   G TP  LA+  GH
Sbjct: 104 A------DVNAKDKDGYTPLHLAAREGH 125

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E G  P +L    +  L  A+  GY   +       V+IN  D NG T L +A +    +
Sbjct: 57  EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVK 116
Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
            V +L+A GA      D T +  SG TP DLA ++G++ +
Sbjct: 117 CVEALLARGA------DLTTEADSGYTPMDLAVALGYRKV 150

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 720 AAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPT 779
           AA  G D  +      G ++N RD  GWT LH AA+ G    V  L+  GA      D  
Sbjct: 21  AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGA------DVN 74
Query: 780 PKYPSGRTPADLASSIGH 797
            K   G TP  LA+  GH
Sbjct: 75  AKDSLGVTPLHLAARRGH 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	911
2cxk_A	95	Camta1, calmodulin binding transcription activator	4e-34
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-15
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-12
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-14
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-12
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-14
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-12
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-10
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-06
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-12
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	8e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-06
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-13
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-08
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-07
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-13
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-13
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-08
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-13
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-11
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-10
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-07
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-13
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-12
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-11
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-08
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-13
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-12
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-12
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-12
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-13
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-12
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-06
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-06
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-13
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-12
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-10
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-13
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-11
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-13
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-12
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-12
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-12
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-11
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-13
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-06
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-12
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-10
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-07
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-05
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-12
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-11
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-07
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-13
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-13
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-12
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-08
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-05
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-13
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-12
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	9e-13
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-11
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-06
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-12
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	9e-07
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-09
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-09
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-06
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-12
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-12
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-12
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-09
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-06
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-12
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-07
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-12
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-12
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-12
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	5e-12
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-09
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-08
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-09
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-08
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-12
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-09
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-04
2rfa_A	232	Transient receptor potential cation channel subfa	1e-11
2rfa_A	232	Transient receptor potential cation channel subfa	7e-10
2rfa_A	232	Transient receptor potential cation channel subfa	4e-09
2rfa_A	232	Transient receptor potential cation channel subfa	1e-08
2rfa_A	232	Transient receptor potential cation channel subfa	1e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-11
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-10
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-11
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-11
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	9e-06
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	9e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-10
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-05
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-11
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-11
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-11
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-07
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-10
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	9e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-06
2etb_A	256	Transient receptor potential cation channel subfam	9e-10
2etb_A	256	Transient receptor potential cation channel subfam	8e-07
2etb_A	256	Transient receptor potential cation channel subfam	2e-06
2etb_A	256	Transient receptor potential cation channel subfam	4e-06
2etb_A	256	Transient receptor potential cation channel subfam	4e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-04
2pnn_A	273	Transient receptor potential cation channel subfa	5e-09
2pnn_A	273	Transient receptor potential cation channel subfa	6e-08
2pnn_A	273	Transient receptor potential cation channel subfa	1e-07
2pnn_A	273	Transient receptor potential cation channel subfa	4e-07
2pnn_A	273	Transient receptor potential cation channel subfa	8e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-09
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-09
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-06
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-06
3muj_A	138	Transcription factor COE3; immunoglobulin like fol	1e-05

>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1 Length = 95

 Score =  124 bits (313), Expect = 4e-34
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 503 SQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGV 562
           S      + D+SP W+Y    VKVLITG +  +     +  +SC+F +I VPA ++  GV
Sbjct: 2   SSGSSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGV 56

Query: 563 LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRAS 598
           LRC+  +   G V   V  +N++  + V  FEY++ 
Sbjct: 57  LRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEYKSG 91

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 73.3 bits (181), Expect = 4e-15
 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 17/103 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVN-GWTALHWAAYCGRERTVA 763
           D  G+  L F A LG     +   V     AG +++ RD+  G TALH AA   R   V 
Sbjct: 73  DENGRTALLFVAGLGS---DK--CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 127

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           +L+ LGA      D   +   G T  +LA  I      G   +
Sbjct: 128 ALVELGA------DIEVEDERGLTALELAREILKTTPKGNPMQ 164

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 39/150 (26%)

Query: 699 AAEGGKGPCVLDHCGQGV---------LHFAAALGYDWALEPTTV----AGVNINFRDVN 745
             + G  P  +                   AA        +   +       +++  D N
Sbjct: 21  EWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKAD---EQ--ALSQLLEDRDVDAVDEN 75

Query: 746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPK-YPSGRTPADLASSIGHKGIAGYL 804
           G TAL + A  G ++ V  L   GA      D   +    G T   +A+      +   L
Sbjct: 76  GRTALLFVAGLGSDKCVRLLAEAGA------DLDHRDMRGGLTALHMAAGYVRPEVVEAL 129

Query: 805 AESDLSSALSA-ISLNKKDGDVAEVTGATA 833
                   +     +  +D       G TA
Sbjct: 130 --------VELGADIEVEDER-----GLTA 146

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 55.6 bits (135), Expect = 5e-09
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 10/59 (16%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH AA        E   V      G +I   D  G TAL  A    +     + +  G 
Sbjct: 114 LHMAAGYVR---PE--VVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 46.3 bits (111), Expect = 8e-06
 Identities = 14/100 (14%), Positives = 24/100 (24%), Gaps = 22/100 (22%)

Query: 734 VAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793
           V  +  +     G          G   +      + A      D   +     TP   A+
Sbjct: 2   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA------DVVSE---YETPWWTAA 52

Query: 794 SIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 833
               +     L        L    ++  D +     G TA
Sbjct: 53  RKADEQALSQL--------LEDRDVDAVDEN-----GRTA 79

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 73.6 bits (182), Expect = 1e-14
 Identities = 31/129 (24%), Positives = 40/129 (31%), Gaps = 20/129 (15%)

Query: 710 DHCGQGVLHFAAALGYDWA----LEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765
           D  G   LH A   G   A    +      G  ++  +    T LH A        V  L
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSS-ALSAISLNKKDGD 824
           +  GA       P      G+T A LA           L    L S A   + L  ++ D
Sbjct: 66  VTAGA------SPMALDRHGQTAAHLACEHRSPTCLRAL----LDSAAPGTLDLEARNYD 115

Query: 825 VAEVTGATA 833
                G TA
Sbjct: 116 -----GLTA 119

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 66.3 bits (163), Expect = 3e-12
 Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  A        L    V      G N+N +  +G +ALH A+  G    V +L+  GA 
Sbjct: 154 LIHAVENNS---LS--MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA- 207

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D + K     TP  +A S     I    
Sbjct: 208 -----DSSLKNCHNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 62.9 bits (154), Expect = 5e-11
 Identities = 24/105 (22%), Positives = 34/105 (32%), Gaps = 21/105 (20%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---------AGVNINFRDVNGWTALHWAAYCGRER 760
           D  GQ   H A             +           +++  R+ +G TALH A     + 
Sbjct: 76  DRHGQTAAHLACEHRS---PT--CLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 130

Query: 761 TVASLIALGAAPGALSDPTPK-YPSGRTPADLASSIGHKGIAGYL 804
           TV  L+  GA      D       SGR+P   A       +   L
Sbjct: 131 TVQLLLERGA------DIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 54.0 bits (131), Expect = 5e-08
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
               D +G T LH A   G    V  L+ L    G   +        +TP  LA      
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLAVITTLP 59

Query: 799 GIAGYL 804
            +   L
Sbjct: 60  SVVRLL 65

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 52.5 bits (127), Expect = 2e-07
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 10/66 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
            + G   LH A+  G    L    V     +G + + ++ +  T L  A        +  
Sbjct: 180 MYSGSSALHSASGRGL---LP--LVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG 234

Query: 765 LIALGA 770
                A
Sbjct: 235 KATRPA 240

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 68.2 bits (168), Expect = 9e-14
 Identities = 23/100 (23%), Positives = 30/100 (30%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           DH G   LH A   G+   L+   V         +N       + LH AA  G    V  
Sbjct: 40  DHAGWTPLHEACNHGH---LK--VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKL 94

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L++ GA              G  P D       K +    
Sbjct: 95  LLSYGA------SRNAVNIFGLRPVDYTDDESMKSLLLLP 128

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 63.2 bits (155), Expect = 5e-12
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +H G+ +LH A+  G    +   +V      G + N +D  GWT LH A   G  + V  
Sbjct: 7   NHRGETLLHIASIKGD---IP--SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A                +P   A+  GH  I   L
Sbjct: 62  LLQHKA------LVNTTGYQNDSPLHDAAKNGHVDIVKLL 95

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 59.0 bits (144), Expect = 1e-10
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G++    +  G T LH A+  G   +V  L+  G+      DP  K  +G TP   A + 
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGS------DPNVKDHAGWTPLHEACNH 53

Query: 796 GHKGIAGYL 804
           GH  +   L
Sbjct: 54  GHLKVVELL 62

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 46.3 bits (111), Expect = 4e-06
 Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 13/71 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVA 763
            +     LH AA  G+   ++   +       G + N  ++ G   + +      +  + 
Sbjct: 73  GYQNDSPLHDAAKNGH---VD---IVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL 126

Query: 764 SLIALGAAPGA 774
                  +  A
Sbjct: 127 LPEK-NESSSA 136

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 72.7 bits (179), Expect = 1e-13
 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 23/132 (17%)

Query: 710 DHCGQGVLHFAAALGY--------DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 761
               + VLH+ A+               +    AG ++N  D +  T L  A    R R 
Sbjct: 122 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 181

Query: 762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 821
           VA L+  GA      DPT    S R+    A++    G+  Y+    L+S      + + 
Sbjct: 182 VAYLMKAGA------DPTIYNKSERSALHQAAANRDFGMMVYM----LNSTKLKGDIEEL 231

Query: 822 DGDVAEVTGATA 833
           D +     G TA
Sbjct: 232 DRN-----GMTA 238

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 17/101 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGRERTVA 763
            + G+  LH+AA +     +    V       G N + +D +G T +  AA  GR   V 
Sbjct: 276 KYKGRTALHYAAQVSN---MP--IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 330

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            LI  GA             +  T   LA +  H  I    
Sbjct: 331 YLIQQGA------SVEAVDATDHTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 60.7 bits (148), Expect = 8e-10
 Identities = 17/126 (13%), Positives = 28/126 (22%), Gaps = 14/126 (11%)

Query: 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768
           L H            G D+  +            +      LH  A  G       +   
Sbjct: 57  LQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRE 115

Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAE 827
                   +        RT     +S      +  L   +    ++A   +N  D D   
Sbjct: 116 SV------NIIDPR-HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD--- 165

Query: 828 VTGATA 833
               T 
Sbjct: 166 --ENTP 169

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 60.4 bits (147), Expect = 1e-09
 Identities = 27/106 (25%), Positives = 38/106 (35%), Gaps = 14/106 (13%)

Query: 710 DHCGQGVLHFAAALGYDWALE------PTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763
           +   +  LH AAA               +T    +I   D NG TAL   A+      VA
Sbjct: 196 NKSERSALHQAAANRD---FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA 252

Query: 764 S---LIALGA--APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           S   L+  GA       +    +   GRT    A+ + +  I  YL
Sbjct: 253 SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 18/107 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---AGVNINFR--------DVNGWTALHWAAYCGR 758
           D  G   L   A       +    +    G  +++            G TALH+AA    
Sbjct: 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 291

Query: 759 ERTVASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
              V  L+   G+      +   +   G+TP  LA+  G   +  YL
Sbjct: 292 MPIVKYLVGEKGS------NKDKQDEDGKTPIMLAAQEGRIEVVMYL 332

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 53.4 bits (129), Expect = 2e-07
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 19/115 (16%)

Query: 692 QVW--LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTA 749
            VW   ++   +  K    +    Q  L  A+  GY              N         
Sbjct: 15  SVWMPPMENEEKNRKNHQSITS-SQHSLLEASYDGY---------IKRQRNELQHYSLYP 64

Query: 750 LHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                  G +                  PT   P         ++ G   I   +
Sbjct: 65  NPQGYGNGNDFLGDFNHTNLQ------IPTEPEPESPIKLHTEAA-GSYAITEPI 112

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 48.8 bits (117), Expect = 4e-06
 Identities = 11/59 (18%), Positives = 15/59 (25%), Gaps = 10/59 (16%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           +  AA  G    +E   V      G ++   D    TA   A        V        
Sbjct: 317 IMLAAQEGR---IE--VVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 69.0 bits (170), Expect = 1e-13
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 16/102 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +      LH AA+ G+    +   V        +IN  + +G   LH+A + G+++    
Sbjct: 69  NRGDDTPLHLAASHGH---RD--IVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 123

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           L+A GA        +     G  P D A +   + +     +
Sbjct: 124 LVANGA------LVSICNKYGEMPVDKAKAPLRELLRERAEK 159

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 62.1 bits (152), Expect = 3e-11
 Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 17/94 (18%)

Query: 717 LHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           +      G         V         ++N  D +G++ LHWA   GR   V  LI  GA
Sbjct: 9   IFTQCREGN---AV--AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                           TP  LA+S GH+ I   L
Sbjct: 64  ------RINVMNRGDDTPLHLAASHGHRDIVQKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 62.1 bits (152), Expect = 3e-11
 Identities = 26/100 (26%), Positives = 30/100 (30%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   LH+A   G         V      G  IN  +    T LH AA  G    V  
Sbjct: 36  DDHGFSPLHWACREGR---SA--VVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQK 90

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A      D       G  P   A   G   +A  L
Sbjct: 91  LLQYKA------DINAVNEHGNVPLHYACFWGQDQVAEDL 124

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 15/88 (17%), Positives = 22/88 (25%), Gaps = 12/88 (13%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           +  G   LH+A   G D   E     G  ++  +  G   +  A    RE        +G
Sbjct: 102 NEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGH 797
                             P       G 
Sbjct: 162 QNLNR------------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 50.5 bits (122), Expect = 3e-07
 Identities = 8/62 (12%), Positives = 12/62 (19%), Gaps = 5/62 (8%)

Query: 743 DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAG 802
                  +      G    V   +          D       G +P   A   G   +  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTEN-----DLNQGDDHGFSPLHWACREGRSAVVE 56

Query: 803 YL 804
            L
Sbjct: 57  ML 58

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 68.6 bits (169), Expect = 2e-13
 Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           +H  AA G    +    +         IN  D  G+T L WAA  G+   V  L+  GA 
Sbjct: 7   VHQLAAQGE---ML--YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA- 60

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                DP        +   LA S G+  I   L
Sbjct: 61  -----DPQLLGKGRESALSLACSKGYTDIVKML 88

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 67.8 bits (167), Expect = 3e-13
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  A + GY    +   V      GV++N  D NG T L +A +    + V  L+  GA 
Sbjct: 73  LSLACSKGY---TD--IVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA- 126

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                DPT +  SG    DLA ++G++ +   +
Sbjct: 127 -----DPTIETDSGYNSMDLAVALGYRSVQQVI 154

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 62.0 bits (152), Expect = 2e-11
 Identities = 21/93 (22%), Positives = 27/93 (29%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L +AAA G    +    V      G +         +AL  A   G    V  L+  G  
Sbjct: 40  LMWAAAHGQ---IA--VVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV- 93

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D      +G TP   A    H      L
Sbjct: 94  -----DVNEYDWNGGTPLLYAVHGNHVKCVKML 121

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 54.3 bits (132), Expect = 1e-08
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
               ++H  A  G    +A+ I                  G TP   A++ G   +  +L
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQEN------VINHTDEEGFTPLMWAAAHGQIAVVEFL 55

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 9/66 (13%), Positives = 21/66 (31%), Gaps = 10/66 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   L +A    +   ++   V     +G +      +G+ ++  A   G       
Sbjct: 99  DWNGGTPLLYAVHGNH---VK--CVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV 153

Query: 765 LIALGA 770
           + +   
Sbjct: 154 IESHLL 159

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 68.6 bits (169), Expect = 2e-13
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  A+  GY    +   V       V+IN  D NG T L +A      + V +L+A GA 
Sbjct: 73  LSLASTGGY---TD--IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA- 126

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D T +  SG TP DLA ++G++ +   +
Sbjct: 127 -----DLTTEADSGYTPMDLAVALGYRKVQQVI 154

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 63.2 bits (155), Expect = 1e-11
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 17/94 (18%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVN-INFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           +H  AA G    L+   +      G N +N  D  G+T L WA+  G   TV  L+  GA
Sbjct: 6   IHQLAAQGE---LD--QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                 DP        +   LAS+ G+  I G L
Sbjct: 61  ------DPHILAKERESALSLASTGGYTDIVGLL 88

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 59.7 bits (146), Expect = 1e-10
 Identities = 20/93 (21%), Positives = 29/93 (31%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L +A+A G    +E  TV      G + +       +AL  A+  G    V  L+     
Sbjct: 40  LIWASAFGE---IE--TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVD 94

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                       +G TP   A    H      L
Sbjct: 95  INIYDW------NGGTPLLYAVRGNHVKCVEAL 121

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 50.1 bits (121), Expect = 4e-07
 Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 16/84 (19%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   L +A    +   ++   V      G ++     +G+T +  A   G  +    
Sbjct: 99  DWNGGTPLLYAVRGNH---VK--CVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV 153

Query: 765 LIALGAAPGALSDPTPKYPSGRTP 788
           +                      P
Sbjct: 154 IENHIL------KLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 48.2 bits (116), Expect = 2e-06
 Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 5/59 (8%)

Query: 746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
              ++H  A  G    +   +  G       D   +   G TP   AS+ G      +L
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD---ER--GFTPLIWASAFGEIETVRFL 55

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 71.8 bits (177), Expect = 2e-13
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 31/141 (21%)

Query: 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
           LV+ A E G+ P                       E   V  +  + +   G TALHW  
Sbjct: 103 LVEGAKERGQMP----------ESLLNECDE---RE---VNEIGSHVKHCKGQTALHWCV 146

Query: 755 YCGRER--TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSA 812
             G E    +  L+ LGA       PT K  +  TP   A    ++     + ++  S +
Sbjct: 147 GLGPEYLEMIKILVQLGA------SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS 200

Query: 813 LSAISLNKKDGDVAEVTGATA 833
             ++ L+  +       G + 
Sbjct: 201 --SLRLDYANKQ-----GNSH 214

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 68.4 bits (168), Expect = 3e-12
 Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 11/100 (11%)

Query: 710 DHCGQGVLHFAAALGYDWALE-----PTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D   +  L  A       AL+       + + + +++ +  G + LHWA     E     
Sbjct: 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMR 229

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            + +G       D   +      P  L+       +   L
Sbjct: 230 FVEMGI------DVNMEDNEHTVPLYLSVRAAMVLLTKEL 263

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 64.1 bits (157), Expect = 6e-11
 Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 18/100 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D      +H AA  G     +   V      GV+   ++  G TALH A   G   T   
Sbjct: 17  DDENMEKIHVAARKGQ---TD--EVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKY 71

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L ++G         +  +  G+ P  LA       +   L
Sbjct: 72  LASVGE------VHSLWH--GQKPIHLAVMANKTDLVVAL 103

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 63.0 bits (154), Expect = 1e-10
 Identities = 17/101 (16%), Positives = 29/101 (28%), Gaps = 11/101 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              GQ  LH+   LG +  LE   +      G +   +D    T L  A        +  
Sbjct: 135 HCKGQTALHWCVGLGPE-YLE--MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDL 191

Query: 765 LIALGAAP-GALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           ++    +              G +    A  I  + +A   
Sbjct: 192 MMDTVPSKSSL--RLDYANKQGNSHLHWAILINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 63.0 bits (154), Expect = 1e-10
 Identities = 15/136 (11%), Positives = 32/136 (23%), Gaps = 29/136 (21%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G   LH+A  + +    +          G+++N  D      L+ +           
Sbjct: 208 NKQGNSHLHWAILINW---ED--VAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKE 262

Query: 765 LIALGAAPGAL-------SDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS 817
           L+                +   P           A+    + +   L E           
Sbjct: 263 LLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL-------DE 315

Query: 818 LNKKDGDVAEVTGATA 833
           + +         GA  
Sbjct: 316 VVRSLNT-----GAGG 326

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 732 TTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL 791
           T    +N    D      +H AA  G+   V  LI  G        PT +   G T   L
Sbjct: 6   TDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGV------SPTIQNRFGCTALHL 59

Query: 792 ASSIGHKGIAGYL 804
           A   G    A YL
Sbjct: 60  ACKFGCVDTAKYL 72

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.7 bits (143), Expect = 3e-09
 Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 28/128 (21%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G   LH A   G    ++  T       G   +    +G   +H A    +   V +
Sbjct: 50  NRFGCTALHLACKFGC---VD--TAKYLASVGEVHS--LWHGQKPIHLAVMANKTDLVVA 102

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES---DLSSAL-SAISLNK 820
           L+                  G+ P  L +    + +    +        +AL   + L  
Sbjct: 103 LVEGAK------------ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGP 150

Query: 821 KDGDVAEV 828
           +  ++ ++
Sbjct: 151 EYLEMIKI 158

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 55.6 bits (135), Expect = 3e-08
 Identities = 10/137 (7%), Positives = 24/137 (17%), Gaps = 31/137 (22%)

Query: 710 DHCGQGVLHFAAALGY-------------DWALEPTTVAGVNINFRDVNGWTALHWAAYC 756
           D+     L+ +                            G  +    V     +  AA  
Sbjct: 241 DNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300

Query: 757 GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAI 816
            ++  +  L           +      +G   A          +                
Sbjct: 301 SKQEVLQLLQEKLD------EVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPS-------A 347

Query: 817 SLNKKDGDVAEVTGATA 833
            +  +         A +
Sbjct: 348 PVRTRSRS-----RARS 359

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 55.6 bits (135), Expect = 3e-08
 Identities = 12/126 (9%), Positives = 24/126 (19%), Gaps = 18/126 (14%)

Query: 673 FSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPT 732
            S       L ++LL++     +       G             +  AA           
Sbjct: 250 LSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK------Q 303

Query: 733 TVA------GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGR 786
            V          +      G                   +A  A          +  S  
Sbjct: 304 EVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSA------PVRTRSRSRA 357

Query: 787 TPADLA 792
             + ++
Sbjct: 358 RSSAVS 363

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 68.2 bits (168), Expect = 3e-13
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G+  L ++   GY    E          G N+N R++ G T L  A+  GR   V  
Sbjct: 98  DFSGKTPLMWSIIFGY---SE--MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKK 152

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+ LGA      D + +  +G T    A   G + +    
Sbjct: 153 LLELGA------DISARDLTGLTAEASARIFGRQEVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 66.3 bits (163), Expect = 1e-12
 Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 36/133 (27%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   L +A        L           G N+N +D +G T L W+   G       
Sbjct: 65  DIEGSTALIWAVKNNR---LG--IAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYF 119

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNK 820
           L+  GA      +   +   G TP  +AS  G   I   L           +     ++ 
Sbjct: 120 LLEHGA------NVNDRNLEGETPLIVASKYGRSEIVKKL-----------LELGADISA 162

Query: 821 KDGDVAEVTGATA 833
           +D       G TA
Sbjct: 163 RDLT-----GLTA 170

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 66.3 bits (163), Expect = 2e-12
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 36/133 (27%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D   +  L  A  LG         +         +  +D+ G TAL WA    R      
Sbjct: 32  DSYNRTPLMVACMLGM---EN--AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEK 86

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNK 820
           L++ G+      +   K  SG+TP   +   G+  ++ +L           +     +N 
Sbjct: 87  LLSKGS------NVNTKDFSGKTPLMWSIIFGYSEMSYFL-----------LEHGANVND 129

Query: 821 KDGDVAEVTGATA 833
           ++ +     G T 
Sbjct: 130 RNLE-----GETP 137

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 64.3 bits (158), Expect = 6e-12
 Identities = 26/129 (20%), Positives = 33/129 (25%), Gaps = 32/129 (24%)

Query: 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768
           +D  G+ V                       N+RD    T L  A   G E  +  L+  
Sbjct: 4   MDKNGEIVEKIKDEKSI------NQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVEN 57

Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNKKDGD 824
                       K   G T    A      GIA  L           +S    +N KD  
Sbjct: 58  FD------KLEDKDIEGSTALIWAVKNNRLGIAEKL-----------LSKGSNVNTKDFS 100

Query: 825 VAEVTGATA 833
                G T 
Sbjct: 101 -----GKTP 104

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 50.1 bits (121), Expect = 5e-07
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G+  L  A+  G     E   V      G +I+ RD+ G TA   A   GR+  +  
Sbjct: 131 NLEGETPLIVASKYGR---SE--IVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185

Query: 765 LIALGAA 771
              +  A
Sbjct: 186 FTEVRRA 192

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGRERTVA 763
           D  G   L++A   G+    +   V        + +N ++  G TALH AA+ G    V 
Sbjct: 103 DKAGSTALYWACHGGH---KD--IVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQ 157

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 823
            L+A GA          +    +   D+A++     +      +D     +  +L+  + 
Sbjct: 158 LLLAKGA------RTDLRNIEKKLAFDMATNAACASLLKKKQGTD-----AVRTLSNAED 206

Query: 824 DVAE 827
            + +
Sbjct: 207 YLDD 210

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 65.3 bits (160), Expect = 6e-12
 Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 5/95 (5%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
                  LH AA  G    L       V +N  D  G TAL+WA + G +  V  L    
Sbjct: 70  AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF--- 126

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
             P    +   +   G T    A+  G+  I   L
Sbjct: 127 TQPNI--ELNQQNKLGDTALHAAAWKGYADIVQLL 159

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 14/95 (14%), Positives = 22/95 (23%), Gaps = 11/95 (11%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
                       + G         +    +  +  +    LH AA  G    +   +   
Sbjct: 42  TDMSDTNWWKGTSKG-----RTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR 96

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                         +G T    A   GHK I   L
Sbjct: 97  V------GVNGLDKAGSTALYWACHGGHKDIVEML 125

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 11/56 (19%), Positives = 14/56 (25%), Gaps = 6/56 (10%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
            G   +  A Y    RT   L           D         T     +S G  G+
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEG------DIIYITDMSDTNWWKGTSKGRTGL 60

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 15/118 (12%), Positives = 27/118 (22%), Gaps = 25/118 (21%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
           +  A         +   +   +I +      T        GR   +         P    
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---------PSNYV 66

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
               +      P   A+  G+               L   + +N  D       G+TA
Sbjct: 67  AEQAES--IDNPLHEAAKRGNLSWLREC--------LDNRVGVNGLDKA-----GSTA 109

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 28/100 (28%), Positives = 34/100 (34%), Gaps = 10/100 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           ++  Q  LH A          P        AG +   RD  G T LH A   G   +V  
Sbjct: 42  NNLQQTPLHLAVITNQ-----PEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGV 96

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L      P   S       +G T   LAS  G+ GI   L
Sbjct: 97  LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 717 LHFAAALGY-DWALEPTTVA---GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
           LH A         +E           +NF++    T LH A    +     +L+  G   
Sbjct: 12  LHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC-- 69

Query: 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 832
               DP  +   G TP  LA   G     G L +S  +  L +I L   + +     G T
Sbjct: 70  ----DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI-LKATNYN-----GHT 119

Query: 833 A 833
            
Sbjct: 120 C 120

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 62.6 bits (153), Expect = 6e-11
 Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 695 LVQKAAEGGKGPCV--LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALH 751
           L Q          +   ++ G   LH A+  GY   +E     G ++N ++  NG TALH
Sbjct: 97  LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156

Query: 752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            A        V+ L+  GA      D       G +P  L        I   L
Sbjct: 157 LAVDLQNPDLVSLLLKCGA------DVNRVTYQGYSPYQLTWGRPSTRIQQQL 203

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 61.8 bits (151), Expect = 1e-10
 Identities = 29/131 (22%), Positives = 43/131 (32%), Gaps = 25/131 (19%)

Query: 710 DHCGQGVLHFAAALGYDWALE------PTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763
           D  G   LH A   G   ++        T      +   + NG T LH A+  G    V 
Sbjct: 75  DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVE 134

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKD 822
            L++LGA   A         +GRT   LA  + +  +   L        L     +N+  
Sbjct: 135 LLVSLGADVNAQEP-----CNGRTALHLAVDLQNPDLVSLL--------LKCGADVNRVT 181

Query: 823 GDVAEVTGATA 833
                  G + 
Sbjct: 182 YQ-----GYSP 187

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 12/90 (13%), Positives = 19/90 (21%), Gaps = 16/90 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A  L      +   V      G ++N     G++           R    L  L   
Sbjct: 155 LHLAVDLQN---PD--LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL- 208

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIA 801
                +     P         +        
Sbjct: 209 -----ENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 45.2 bits (108), Expect = 4e-05
 Identities = 18/92 (19%), Positives = 25/92 (27%), Gaps = 16/92 (17%)

Query: 743 DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAG 802
             +G + LH A     +     +I       A      +    +TP  LA       IA 
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA--FLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 803 YLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
            L        L A      +D       G T 
Sbjct: 63  AL--------LGAGCDPELRDFR-----GNTP 81

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 70.6 bits (174), Expect = 5e-13
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 9/98 (9%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHWAAYCGRERTVASLI 766
               +  LH A A  +    +   +    G N+N ++ +  T LH AA       +  L 
Sbjct: 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLH 267

Query: 767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
             GA              G+T    A+  GH      L
Sbjct: 268 KHGA------KMNALDSLGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 69.4 bits (171), Expect = 1e-12
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A + G+    E          G  +N  D+  +T LH AA   R    + L++ GA 
Sbjct: 95  LHNACSYGH---YE--VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA- 148

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                DPT     G++  D+A +   +    Y 
Sbjct: 149 -----DPTLVNCHGKSAVDMAPTPELRERLTYE 176

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 64.4 bits (158), Expect = 5e-11
 Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 7/96 (7%)

Query: 710 DHCGQGVLHFAAALG-YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768
               +  L  AA  G  +  +   T   VN +  D    T LH AA   R R V  L+  
Sbjct: 21  GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH 80

Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           GA      D   K   G  P   A S GH  +   L
Sbjct: 81  GA------DVHAKDKGGLVPLHNACSYGHYEVTELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 59.0 bits (144), Expect = 2e-09
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 18/95 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVA 763
           +      LH AA   +        V       G  +N  D  G TALH AA  G  +T  
Sbjct: 244 NKDFMTPLHVAAERAH------NDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCR 297

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
            L++ G+      DP+     G T A + +    +
Sbjct: 298 LLLSYGS------DPSIISLQGFTAAQMGNEAVQQ 326

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 52.5 bits (127), Expect = 3e-07
 Identities = 13/70 (18%), Positives = 17/70 (24%), Gaps = 7/70 (10%)

Query: 736 GVNINFRDVNGWTALHWAA-YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
                         L  AA     E+ +A L  L        +         TP  LA+ 
Sbjct: 14  SAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV------NCHASDGRKSTPLHLAAG 67

Query: 795 IGHKGIAGYL 804
                I   L
Sbjct: 68  YNRVRIVQLL 77

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 49.8 bits (120), Expect = 2e-06
 Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 12/68 (17%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVA 763
           D      LH AA+      +E   V       G +    + +G +A+  A        + 
Sbjct: 121 DLWQFTPLHEAASKNR---VE---VCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLT 174

Query: 764 SLIALGAA 771
                 + 
Sbjct: 175 YEFKGHSL 182

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 68.6 bits (169), Expect = 6e-13
 Identities = 34/131 (25%), Positives = 45/131 (34%), Gaps = 31/131 (23%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
               +  LH AA  G+   ++         AG NI+    +  T L  AA       V  
Sbjct: 8   HQNKRSPLHAAAEAGH---VD--ICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY 62

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS--AISLNKKD 822
           LI  GA         PK   G T   LA+  GH  +  YL        LS   + +N +D
Sbjct: 63  LIKAGA------LVDPKDAEGSTCLHLAAKKGHYEVVQYL--------LSNGQMDVNCQD 108

Query: 823 GDVAEVTGATA 833
                  G T 
Sbjct: 109 DG-----GWTP 114

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 65.9 bits (162), Expect = 4e-12
 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 15/100 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
               +  L  AA   +   LE   V     AG  ++ +D  G T LH AA  G    V  
Sbjct: 41  SEDQRTPLMEAAENNH---LE--AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQY 95

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L++ G       D   +   G TP   A+   H  +   L
Sbjct: 96  LLSNGQM-----DVNCQDDGGWTPMIWATEYKHVDLVKLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 65.9 bits (162), Expect = 5e-12
 Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 36/133 (27%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   + +A    +   ++   V      G +IN RD      LHWAA+ G       
Sbjct: 108 DDGGWTPMIWATEYKH---VD--LVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI 162

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNK 820
           L+A         D       G +P  +A+                      +S    +  
Sbjct: 163 LLAAKC------DLHAVNIHGDSPLHIAARENRYDCVVLF-----------LSRDSDVTL 205

Query: 821 KDGDVAEVTGATA 833
           K+ +     G T 
Sbjct: 206 KNKE-----GETP 213

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 65.5 bits (161), Expect = 6e-12
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D+     LH+AA  G    ++         A  +++  +++G + LH AA   R   V  
Sbjct: 141 DNEENICLHWAAFSGC---VD--IAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL 195

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            ++  +      D T K   G TP   AS       A  +
Sbjct: 196 FLSRDS------DVTLKNKEGETPLQCASLNSQVWSALQM 229

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 62.4 bits (153), Expect = 6e-11
 Identities = 29/132 (21%), Positives = 44/132 (33%), Gaps = 33/132 (25%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA-------GVNINFRDVNGWTALHWAAYCGRERTV 762
           D  G   LH AA  G+    E   V         +++N +D  GWT + WA        V
Sbjct: 74  DAEGSTCLHLAAKKGH---YE---VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV 127

Query: 763 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKK 821
             L++ G+      D   +          A+  G   IA  L        L+A   L+  
Sbjct: 128 KLLLSKGS------DINIRDNEENICLHWAAFSGCVDIAEIL--------LAAKCDLHAV 173

Query: 822 DGDVAEVTGATA 833
           +       G + 
Sbjct: 174 NIH-----GDSP 180

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.7 bits (151), Expect = 1e-10
 Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 20/98 (20%)

Query: 737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG 796
           +N      N  + LH AA  G       L+  GA      +        RTP   A+   
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA------NIDTCSEDQRTPLMEAAENN 55

Query: 797 HKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
           H     YL        + A   ++ KD +     G+T 
Sbjct: 56  HLEAVKYL--------IKAGALVDPKDAE-----GSTC 80

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 48.9 bits (118), Expect = 2e-06
 Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 10/66 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G   LH AA        +   V        ++  ++  G T L  A+   +  +   
Sbjct: 174 NIHGDSPLHIAARENR---YD--CVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQ 228

Query: 765 LIALGA 770
           +     
Sbjct: 229 MSKALQ 234

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 68.6 bits (169), Expect = 6e-13
 Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
            H G   L  AA L          +     +  ++N  D  G +ALHWAA          
Sbjct: 121 MHDGTTPLILAARLAV---EG--MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 175

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      +   +     TP  LA+  G    A  L
Sbjct: 176 LLKNGA------NKDMQNNREETPLFLAAREGSYETAKVL 209

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 66.7 bits (164), Expect = 3e-12
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G+  LH+AAA+     ++          G N + ++    T L  AA  G   T   
Sbjct: 154 DDLGKSALHWAAAVNN---VD--AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 208

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A               R P D+A    H  I   L
Sbjct: 209 LLDHFANRDI------TDHMDRLPRDIAQERMHHDIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 65.6 bits (161), Expect = 7e-12
 Identities = 30/133 (22%), Positives = 43/133 (32%), Gaps = 35/133 (26%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G+  LH AA        +         A  + N +D  G T LH A     +     
Sbjct: 54  DRTGETALHLAARYSR---SD--AAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI 108

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNK 820
           LI   A      D   +   G TP  LA+ +  +G+   L           I+    +N 
Sbjct: 109 LIRNRAT-----DLDARMHDGTTPLILAARLAVEGMLEDL-----------INSHADVNA 152

Query: 821 KDGDVAEVTGATA 833
            D       G +A
Sbjct: 153 VDDL-----GKSA 160

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 54.8 bits (133), Expect = 2e-08
 Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 32/111 (28%)

Query: 737 VNINFRDVNGWTALHWAAYCGRERTVAS-------------LIALGAAPGALSDPTPKYP 783
           +++N R  +G+T L  A+  G      +              I  GA+    +D      
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTD-----R 55

Query: 784 SGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
           +G T   LA+       A  L        L A    N +D       G T 
Sbjct: 56  TGETALHLAARYSRSDAAKRL--------LEASADANIQDNM-----GRTP 93

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 47.5 bits (114), Expect = 6e-06
 Identities = 11/68 (16%), Positives = 15/68 (22%), Gaps = 10/68 (14%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           ++  +  L  AA  G     E  T         N +  D         A        V  
Sbjct: 187 NNREETPLFLAAREGS---YE--TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241

Query: 765 LIALGAAP 772
           L       
Sbjct: 242 LDLEHHHH 249

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 66.3 bits (163), Expect = 8e-13
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 15/100 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G  V+H AA  G+   L+  T+        ++N  D  G   LH AA  G  R V  
Sbjct: 67  DRTGFAVIHDAARAGF---LD--TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 121

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A     S+   +   G T  DLA   G   +   +
Sbjct: 122 LVKHTA-----SNVGHRNHKGDTACDLARLYGRNEVVSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 65.1 bits (160), Expect = 2e-12
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 32/131 (24%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G+  L     LG     E          G N + +D  G+  +H AA  G   T+ +
Sbjct: 35  NGFGRTALQ-VMKLGN---PE--IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQT 88

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS--AISLNKKD 822
           L+   A      D   +   G  P  LA+  GH  +  +L        +   A ++  ++
Sbjct: 89  LLEFQA------DVNIEDNEGNLPLHLAAKEGHLRVVEFL--------VKHTASNVGHRN 134

Query: 823 GDVAEVTGATA 833
                  G TA
Sbjct: 135 HK-----GDTA 140

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 60.1 bits (147), Expect = 1e-10
 Identities = 27/126 (21%), Positives = 39/126 (30%), Gaps = 37/126 (29%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  AAA G    LE   +       VN+N ++  G TAL      G       L+  GA 
Sbjct: 9   LASAAARGD---LE--QLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA- 61

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNKKDGDVAE 827
                +P  K  +G      A+  G       L           +     +N +D +   
Sbjct: 62  -----NPDLKDRTGFAVIHDAARAGFLDTLQTL-----------LEFQADVNIEDNE--- 102

Query: 828 VTGATA 833
             G   
Sbjct: 103 --GNLP 106

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 13/69 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA-------GVNINFRDVNGWTALHWAAYCGRERTV 762
           D+ G   LH AA  G+   L    V          N+  R+  G TA   A   GR   V
Sbjct: 100 DNEGNLPLHLAAKEGH---LR---VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV 153

Query: 763 ASLIALGAA 771
           + + A GA 
Sbjct: 154 SLMQANGAG 162

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 44.3 bits (106), Expect = 3e-05
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 9/61 (14%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL-ASSIGHKGIAGY 803
                L  AA  G    + SL+          +   +   GRT   L    +G+  IA  
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNV------NVNAQNGFGRTA--LQVMKLGNPEIARR 55

Query: 804 L 804
           L
Sbjct: 56  L 56

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 65.9 bits (162), Expect = 8e-13
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHWAAYCGRERTVASLI 766
           D  G   +H AA  G+   L+   V    G ++N  D  G   +H A   G    V+ L 
Sbjct: 65  DTSGTSPVHDAARTGF---LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121

Query: 767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           A  +      D   +   G TP +LA   G + +   L
Sbjct: 122 A-ES------DLHRRDARGLTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 64.7 bits (159), Expect = 3e-12
 Identities = 27/124 (21%), Positives = 37/124 (29%), Gaps = 32/124 (25%)

Query: 717 LHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           L  AAA G         V        V+ +  +  G TAL    + G       L+  GA
Sbjct: 6   LSGAAARGDV-----QEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGA 59

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVT 829
                  P  +  SG +P   A+  G       L        +     +N  DG      
Sbjct: 60  ------SPNVQDTSGTSPVHDAARTGFLDTLKVL--------VEHGADVNVPDGT----- 100

Query: 830 GATA 833
           GA  
Sbjct: 101 GALP 104

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 62.4 bits (153), Expect = 2e-11
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 19/98 (19%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G + N +D +G + +H AA  G   T+  L+  GA      D      +G  P  LA   
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA------DVNVPDGTGALPIHLAVQE 111

Query: 796 GHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 833
           GH  +  +L     + +     L+++D       G T 
Sbjct: 112 GHTAVVSFL----AAES----DLHRRDAR-----GLTP 136

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 49.3 bits (119), Expect = 4e-07
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV----AGVNINFRDVNGWTALHWAAYCGRERTVASL 765
           D  G   +H A   G+        V    A  +++ RD  G T L  A   G +  V  L
Sbjct: 98  DGTGALPIHLAVQEGH---TA--VVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 766 I 766
            
Sbjct: 153 Q 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 41.6 bits (99), Expect = 2e-04
 Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 6/59 (10%)

Query: 746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
               L  AA  G  + V  L+           P      G+T   +    G   IA  L
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELV-----HPDALNRFGKTALQVMMF-GSTAIALEL 54

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 67.1 bits (165), Expect = 8e-13
 Identities = 25/124 (20%), Positives = 37/124 (29%), Gaps = 17/124 (13%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
            +    +L  A         E        ++  D  G T L+ A +        +LI  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 829
           A      D   +     +P   A + G   I  Y+    L  A     LNK +       
Sbjct: 63  A------DINLQNSISDSPYLYAGAQGRTEILAYM----LKHA--TPDLNKHNRY----- 105

Query: 830 GATA 833
           G  A
Sbjct: 106 GGNA 109

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 59.8 bits (146), Expect = 3e-10
 Identities = 25/139 (17%), Positives = 38/139 (27%), Gaps = 41/139 (29%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGRERTVA 763
           +        +A A G     E   +      A  ++N  +  G  AL  AA  G    V 
Sbjct: 69  NSISDSPYLYAGAQGR---TE--ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVK 123

Query: 764 SLIALGAAPGALSDPTPKYPSGRTP-----ADLASSIGHKGIAGYLAESDLSSALSAIS- 817
            L+  G       D   +   G T           +  ++ I   L           +  
Sbjct: 124 LLLEDGRE-----DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL-----------MEN 167

Query: 818 ---LNKKDGDVAEVTGATA 833
               + KD       G TA
Sbjct: 168 GADQSIKDNS-----GRTA 181

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 58.6 bits (143), Expect = 8e-10
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AG-VNINFRDVNGWTALHWAAYC-----GR 758
           +  G   L  AA  G+   ++   V      G  +I+F++  G+TAL  A          
Sbjct: 103 NRYGGNALIPAAEKGH---ID--NVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLY 157

Query: 759 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808
           +  V  L+  GA      D + K  SGRT  D A+  G+  I+  LA+ +
Sbjct: 158 QDIVKLLMENGA------DQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.7 bits (125), Expect = 2e-07
 Identities = 12/96 (12%), Positives = 21/96 (21%), Gaps = 26/96 (27%)

Query: 742 RDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
           +       L  A     ++    L                   G TP ++A       IA
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTY------QVDEVDTEGNTPLNIAVHNNDIEIA 55

Query: 802 GYLAESDLSSALSAIS----LNKKDGDVAEVTGATA 833
             L           I     +N ++         + 
Sbjct: 56  KAL-----------IDRGADINLQNSI-----SDSP 75

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 67.9 bits (167), Expect = 8e-13
 Identities = 30/131 (22%), Positives = 40/131 (30%), Gaps = 29/131 (22%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-------AGVNINFRDVNGWTALHWAAYCGRERTV 762
           D  G    H A ++G    LE   V          ++N     G T LH A         
Sbjct: 69  DDSGWTPFHIACSVGN---LE--VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123

Query: 763 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKD 822
             LI  GA          K    + P   A+S+G   +   L         SA+  N +D
Sbjct: 124 QFLIENGA------SVRIKDKFNQIPLHRAASVGSLKLIELL----CGLGKSAV--NWQD 171

Query: 823 GDVAEVTGATA 833
                  G T 
Sbjct: 172 KQ-----GWTP 177

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 65.9 bits (162), Expect = 3e-12
 Identities = 24/123 (19%), Positives = 35/123 (28%), Gaps = 24/123 (19%)

Query: 717 LHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH A             V          +  +D +G   LHW+         + L++   
Sbjct: 6   LHQACMENEF-----FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830
                        SG TP  +A S+G+  +   L        L    LNK         G
Sbjct: 61  NVNLDDY---PDDSGWTPFHIACSVGNLEVVKSL----YDRPLKP-DLNKITNQ-----G 107

Query: 831 ATA 833
            T 
Sbjct: 108 VTC 110

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 54.4 bits (132), Expect = 3e-08
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 19/101 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVN-INFRDVNGWTALHWAAYCGRERTVA 763
           D   Q  LH AA++G    L+   +      G + +N++D  GWT L  A   G      
Sbjct: 137 DKFNQIPLHRAASVGS---LK--LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            L+    A     +       G    D+A    ++ +  + 
Sbjct: 192 LLVEKYGA-----EYDLVDNKGAKAEDVAL---NEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 46.7 bits (112), Expect = 1e-05
 Identities = 12/60 (20%), Positives = 16/60 (26%), Gaps = 7/60 (11%)

Query: 746 GWTALHWAAYCGRERTVAS-LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
               LH A        V   L +  +          K   GR P   + S     I  +L
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPS------LLLQKDQDGRIPLHWSVSFQAHEITSFL 55

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 65.9 bits (162), Expect = 9e-13
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
               +  LH AA+ G+        V      G ++N +D+   TALHWA     +  V  
Sbjct: 64  TKVDRTPLHMAASEGH---AN--IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           LI  GA      D   +    +T  D++   G++ +A  L
Sbjct: 119 LIKYGA------DVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 63.9 bits (157), Expect = 5e-12
 Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   LH AA  G+       T      AGV+ + R     T LH AA  G    V  
Sbjct: 31  DWLGTSPLHLAAQYGH---FS--TTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEV 85

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      D   K     T    A+   H+ +   L
Sbjct: 86  LLKHGA------DVNAKDMLKMTALHWATEHNHQEVVELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 45.8 bits (110), Expect = 8e-06
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 21/90 (23%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           +    L  AA  G++  V  L+A GA       P      G +P  LA+  GH      L
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGA-------PFTTDWLGTSPLHLAAQYGHFSTTEVL 53

Query: 805 AESDLSSALSA-ISLNKKDGDVAEVTGATA 833
                   L A +S + +          T 
Sbjct: 54  --------LRAGVSRDARTKV-----DRTP 70

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 66.2 bits (163), Expect = 9e-13
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           DH G   L  AA  G+   LE   V      G ++N  D+ G T LH AA  G    V  
Sbjct: 77  DHAGMTPLRLAALFGH---LE--IVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEV 131

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      D   +   G+T  D++   G++ +A  L
Sbjct: 132 LLKNGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 63.2 bits (155), Expect = 1e-11
 Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 36/126 (28%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  AA  G     +   V      G ++N  D +GWT LH AA+ G    V  L+  GA 
Sbjct: 18  LLEAARAGR---DD--EVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA- 71

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNKKDGDVAE 827
                D      +G TP  LA+  GH  I   L           +     +N  D +   
Sbjct: 72  -----DVNAVDHAGMTPLRLAALFGHLEIVEVL-----------LKNGADVNANDME--- 112

Query: 828 VTGATA 833
             G T 
Sbjct: 113 --GHTP 116

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 49.7 bits (120), Expect = 4e-07
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
           +  + +    +    L  AA  GR+  V  L+A GA      D   +  SG TP  LA+ 
Sbjct: 4   SHHHHH-HGSDLGKKLLEAARAGRDDEVRILMANGA------DVNAEDASGWTPLHLAAF 56

Query: 795 IGHKGIAGYL 804
            GH  I   L
Sbjct: 57  NGHLEIVEVL 66

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 47.0 bits (113), Expect = 4e-06
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 10/62 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   LH AA  G+   LE   V      G ++N +D  G TA   +   G E     
Sbjct: 110 DMEGHTPLHLAAMFGH---LE--IVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEI 164

Query: 765 LI 766
           L 
Sbjct: 165 LQ 166

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 64.7 bits (159), Expect = 1e-12
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   L+ A A G+   LE   V      G ++N  D  G+T LH AA+ G       
Sbjct: 44  DEYGLTPLYLATAHGH---LE--IVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEV 98

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      D   +   G+T  D++   G++ +A  L
Sbjct: 99  LLKHGA------DVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 60.5 bits (148), Expect = 4e-11
 Identities = 34/126 (26%), Positives = 44/126 (34%), Gaps = 36/126 (28%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  AA  G     +   V      G ++N +D  G T L+ A   G    V  L+  GA 
Sbjct: 18  LLEAARAGQ---DD--EVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA- 71

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNKKDGDVAE 827
                D       G TP  LA+ IGH  IA  L           +     +N +D     
Sbjct: 72  -----DVNAVDAIGFTPLHLAAFIGHLEIAEVL-----------LKHGADVNAQDKF--- 112

Query: 828 VTGATA 833
             G TA
Sbjct: 113 --GKTA 116

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.2 bits (116), Expect = 7e-07
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 10/62 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   LH AA +G+   LE          G ++N +D  G TA   +   G E     
Sbjct: 77  DAIGFTPLHLAAFIGH---LE--IAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEI 131

Query: 765 LI 766
           L 
Sbjct: 132 LQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.2 bits (116), Expect = 9e-07
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 27/103 (26%)

Query: 736 GVNINFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
           G + +     +    L  AA  G++  V  L+A GA      D   K   G TP  LA++
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGA------DVNAKDEYGLTPLYLATA 56

Query: 795 IGHKGIAGYLAESDLSSALSAIS----LNKKDGDVAEVTGATA 833
            GH  I   L           +     +N  D       G T 
Sbjct: 57  HGHLEIVEVL-----------LKNGADVNAVDAI-----GFTP 83

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 64.3 bits (158), Expect = 1e-12
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 16/96 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G+  LH+AA  G    LE   +      G +IN  D +  T L  A Y G    V  
Sbjct: 37  LEGGRKPLHYAADCGQ---LE--ILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKL 91

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
           L++ GA      D T K P G T  +   +   K +
Sbjct: 92  LLSKGA------DKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 59.7 bits (146), Expect = 5e-11
 Identities = 23/93 (24%), Positives = 31/93 (33%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
             +A   G    L+   V      G ++N     G   LH+AA CG+   +  L+  GA 
Sbjct: 11  FMWALKNGD---LD--EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA- 64

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D         TP   A   GH      L
Sbjct: 65  -----DINAPDKHHITPLLSAVYEGHVSCVKLL 92

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 14/60 (23%), Positives = 17/60 (28%), Gaps = 6/60 (10%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                  WA   G    V   +A G       D       GR P   A+  G   I  +L
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGE------DVNRTLEGGRKPLHYAADCGQLEILEFL 59

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 67.9 bits (167), Expect = 2e-12
 Identities = 28/121 (23%), Positives = 37/121 (30%), Gaps = 27/121 (22%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A        ++   V      G NIN  D  GW  LH AA CG       LI+ GA 
Sbjct: 77  LHQACIDDN---VD--MVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA- 130

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 831
                        G TP D+A     + +               ++    D + A     
Sbjct: 131 -----HVGAVNSEGDTPLDIAEEEAMEELLQNE-----------VNRQGVDIEAARKEEE 174

Query: 832 T 832
            
Sbjct: 175 R 175

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 67.1 bits (165), Expect = 4e-12
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 16/102 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AAA GY    E   +     A  ++N +D +GWT LH AA+ G+E     
Sbjct: 196 AKSGGTALHVAAAKGY---TE--VLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           L+          D       G+T  D+A       +     +
Sbjct: 251 LVENLC------DMEAVNKVGQTAFDVADEDILGYLEELQKK 286

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 58.7 bits (143), Expect = 3e-09
 Identities = 32/127 (25%), Positives = 44/127 (34%), Gaps = 36/127 (28%)

Query: 716 VLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           V   A + G     E   V      G +IN+ +V+G TALH A        V  L+  GA
Sbjct: 43  VFLAACSSGD---TE--EVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNKKDGDVA 826
                 +       G  P   A+S G+  IA YL           IS    +   + +  
Sbjct: 98  ------NINQPDNEGWIPLHAAASCGYLDIAEYL-----------ISQGAHVGAVNSE-- 138

Query: 827 EVTGATA 833
              G T 
Sbjct: 139 ---GDTP 142

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 57.1 bits (139), Expect = 8e-09
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
            +N      +G TALH AA  G    +  LI          D   K   G TP   A+  
Sbjct: 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY------DVNIKDYDGWTPLHAAAHW 242

Query: 796 GHKGIAGYLAE 806
           G +     L E
Sbjct: 243 GKEEACRILVE 253

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 53.3 bits (129), Expect = 1e-07
 Identities = 18/88 (20%), Positives = 26/88 (29%), Gaps = 7/88 (7%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
                 +G +  LEP  V       +  +G   L  A   G    V  L+  GA      
Sbjct: 12  EQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACSSGDTEEVLRLLERGA------ 64

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYL 804
           D       G T    A    +  +  +L
Sbjct: 65  DINYANVDGLTALHQACIDDNVDMVKFL 92

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 47.5 bits (114), Expect = 9e-06
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 26/118 (22%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
           L  A         E   +    +N + V+   A               L +         
Sbjct: 143 LDIAEEEAM---EE---LLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI------ 190

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
           +      SG T   +A++ G+  +   L        + A   +N KD D     G T 
Sbjct: 191 NDVRHAKSGGTALHVAAAKGYTEVLKLL--------IQARYDVNIKDYD-----GWTP 235

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 47.1 bits (113), Expect = 1e-05
 Identities = 15/96 (15%), Positives = 22/96 (22%), Gaps = 21/96 (21%)

Query: 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
           +   D           + G E  +   +              K+  G      A S G  
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRK------KTKVKFDDG-AVFLAACSSGDT 53

Query: 799 GIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
                L        L     +N  + D     G TA
Sbjct: 54  EEVLRL--------LERGADINYANVD-----GLTA 76

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 66.3 bits (163), Expect = 2e-12
 Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G+  LH+AAA+     ++          G N + ++    T L  AA  G   T   
Sbjct: 122 DDLGKSALHWAAAVNN---VD--AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 176

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A      +        R P D+A    H  I   L
Sbjct: 177 LLDHFA------NRDITDHMDRLPRDIAQERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 65.1 bits (160), Expect = 6e-12
 Identities = 25/100 (25%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G+  LH AA        +         A  + N +D  G T LH A     +     
Sbjct: 22  DRTGETALHLAARYSR---SD--AAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI 76

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           LI   A      D   +   G TP  LA+ +  +G+   L
Sbjct: 77  LIRNRAT-----DLDARMHDGTTPLILAARLAVEGMLEDL 111

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 64.7 bits (159), Expect = 7e-12
 Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
            H G   L  AA L          +     +  ++N  D  G +ALHWAA          
Sbjct: 89  MHDGTTPLILAARLAV---EG--MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      +   +     TP  LA+  G    A  L
Sbjct: 144 LLKNGA------NKDMQNNREETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 61.7 bits (151), Expect = 1e-10
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA-------GVNINFRDVNGWTALHWAAYCGRERTV 762
           D+ G+  LH A +           V          +++ R  +G T L  AA    E  +
Sbjct: 55  DNMGRTPLHAAVSADA------QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGML 108

Query: 763 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
             LI   A      D       G++    A+++ +   A  L
Sbjct: 109 EDLINSHA------DVNAVDDLGKSALHWAAAVNNVDAAVVL 144

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 58.6 bits (143), Expect = 1e-09
 Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 22/101 (21%)

Query: 736 GVNI-NFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
           G ++ N  D  G TALH AA   R      L+   A      D   +   GRTP   A S
Sbjct: 14  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA------DANIQDNMGRTPLHAAVS 67

Query: 795 IGHKGIAGYLAESDLSSALS--AISLNKKDGDVAEVTGATA 833
              +G+   L        +   A  L+ +  D     G T 
Sbjct: 68  ADAQGVFQIL--------IRNRATDLDARMHD-----GTTP 95

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 11/66 (16%), Positives = 15/66 (22%), Gaps = 10/66 (15%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           ++  +  L  AA  G     E  T         N +  D         A        V  
Sbjct: 155 NNREETPLFLAAREGS---YE--TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 209

Query: 765 LIALGA 770
           L     
Sbjct: 210 LDEYNL 215

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 62.8 bits (154), Expect = 2e-12
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH AA  G+   LE   V     AG ++N +D NG T LH AA  G    V  L+  GA 
Sbjct: 6   LHLAARNGH---LE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA- 59

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D   K  +GRTP  LA+  GH  +   L
Sbjct: 60  -----DVNAKDKNGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 51.2 bits (124), Expect = 2e-08
 Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 26/93 (27%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           NG T LH AA  G    V  L+  GA      D   K  +GRTP  LA+  GH  +   L
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLHLAARNGHLEVVKLL 54

Query: 805 AESDLSSALSAIS----LNKKDGDVAEVTGATA 833
                      +     +N KD +     G T 
Sbjct: 55  -----------LEAGADVNAKDKN-----GRTP 71

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 50.0 bits (121), Expect = 7e-08
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 10/59 (16%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH AA  G+   LE   V     AG ++N +D NG T LH AA  G    V  L+  GA
Sbjct: 39  LHLAARNGH---LE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 9/106 (8%), Positives = 21/106 (19%), Gaps = 11/106 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVA 763
              G  +       G +     T +       G +I          +    +        
Sbjct: 72  TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENE 131

Query: 764 SLI---ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
            +     + +  G       K   G T  +             + +
Sbjct: 132 MIPLYKLIFSQSGL--QLLIKDKWGLTALEFVKRCQKPIALKMMED 175

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 19/128 (14%), Positives = 29/128 (22%), Gaps = 22/128 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS------L 765
           + +      +              G +I  R   G T        G      +       
Sbjct: 41  ILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIF 100

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV 825
           +  GA      D T  Y   +                 +    L  + S + L  KD   
Sbjct: 101 LEKGA------DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKW- 153

Query: 826 AEVTGATA 833
               G TA
Sbjct: 154 ----GLTA 157

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 55.5 bits (134), Expect = 7e-09
 Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-------AGVNINFRDVNGWTALHWAAYCGRERTV 762
               + V+       +    E   +       +G+ +  +D  G TAL +   C +   +
Sbjct: 111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170

Query: 763 ASLIALGA 770
             +     
Sbjct: 171 KMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 17/92 (18%), Positives = 22/92 (23%), Gaps = 9/92 (9%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINF---RDVNGWTALHWAAYCGRERTVASLIALGAAPG 773
           +  AA LG           G        +    +  L       R +    LI  GA   
Sbjct: 10  VSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA--- 66

Query: 774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLA 805
              D   +   G T        G   I G   
Sbjct: 67  ---DIKSRTKEGTTLFFPLFQGGGNDITGTTE 95

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 64.7 bits (159), Expect = 3e-12
 Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 17/100 (17%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D  G   LH A + G+    E          G  +N  D+  +T LH AA  G+      
Sbjct: 72  DKGGLVPLHNACSYGH---YE--VAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 126

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA      DPT K   G TP DL    G   I   L
Sbjct: 127 LLQHGA------DPTKKNRDGNTPLDLVKD-GDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 61.6 bits (151), Expect = 3e-11
 Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 17/94 (18%)

Query: 717 LHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           L  AA  G    +E  TV        VN    +    T LH+AA   R   V  L+  GA
Sbjct: 12  LLEAAKAGD---VE--TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA 66

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                 D   K   G  P   A S GH  +A  L
Sbjct: 67  ------DVHAKDKGGLVPLHNACSYGHYEVAELL 94

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 61.6 bits (151), Expect = 3e-11
 Identities = 27/133 (20%), Positives = 38/133 (28%), Gaps = 36/133 (27%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +      LHFAA       +    V      G +++ +D  G   LH A   G       
Sbjct: 39  EGRQSTPLHFAAGYNR---VS--VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 93

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS----LNK 820
           L+  GA                TP   A++ G   I   L           +       K
Sbjct: 94  LVKHGA------VVNVADLWKFTPLHEAAAKGKYEICKLL-----------LQHGADPTK 136

Query: 821 KDGDVAEVTGATA 833
           K+ D     G T 
Sbjct: 137 KNRD-----GNTP 144

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 50.5 bits (122), Expect = 3e-07
 Identities = 14/69 (20%), Positives = 19/69 (27%), Gaps = 8/69 (11%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G   N         L  AA  G   TV  L  + +      +         TP   A+  
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVETVKKLCTVQSV-----NCRDIEGRQSTPLHFAAGY 52

Query: 796 GHKGIAGYL 804
               +  YL
Sbjct: 53  NRVSVVEYL 61

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 63.0 bits (154), Expect = 3e-12
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L  AA  G     +   V      G ++  +D NG T LH AA  G    V  L+  GA 
Sbjct: 28  LLEAARAGQ---DD--EVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA- 81

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D   +   G+T  D++   G++ +A  L
Sbjct: 82  -----DVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G ++     +    L  AA  G++  V  L+A GA      D   K  +G TP  LA+  
Sbjct: 17  GSHMG---SDLGKKLLEAARAGQDDEVRILMANGA------DVAAKDKNGSTPLHLAARN 67

Query: 796 GHKGIAGYL 804
           GH  +   L
Sbjct: 68  GHLEVVKLL 76

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 65.9 bits (162), Expect = 4e-12
 Identities = 28/130 (21%), Positives = 38/130 (29%), Gaps = 29/130 (22%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           D      +  A   G     E         AG ++   D    T LHWAA   R   V  
Sbjct: 6   DDYSTWDIVKATQYGI---YE--RCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDG 823
            I+ GA    L           TP   A+  GH  +   L        +      +  DG
Sbjct: 61  YISKGAIVDQLGG-----DLNSTPLHWATRQGHLSMVVQL--------MKYGADPSLIDG 107

Query: 824 DVAEVTGATA 833
           +     G + 
Sbjct: 108 E-----GCSC 112

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 64.4 bits (158), Expect = 1e-11
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---AGVNINFRD-VNGWTALHWAAYCGRERTVASL 765
           D  G   L +AA   +  +++PT +     V++N  D  +  TALHWA   G    ++ L
Sbjct: 139 DQNGMTPLMWAAYRTH--SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLL 196

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           +  GA      +   +   G +  DLA    +  +  +L
Sbjct: 197 LEAGA------NVDAQNIKGESALDLAKQRKNVWMINHL 229

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 62.5 bits (153), Expect = 6e-11
 Identities = 13/97 (13%), Positives = 24/97 (24%), Gaps = 19/97 (19%)

Query: 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH 797
           ++   D      +  A   G       L+  G       D         T    A+    
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGY------DVRQPDKENVTLLHWAAINNR 54

Query: 798 KGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
             +  Y         +S    +++  GD      +T 
Sbjct: 55  IDLVKYY--------ISKGAIVDQLGGD----LNSTP 79

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 60.9 bits (149), Expect = 2e-10
 Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 17/94 (18%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH+A   G+   L    V      G + +  D  G + +H AA  G    VA LIA G  
Sbjct: 80  LHWATRQGH---LS--MVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ- 133

Query: 772 PGALSDPTPKYPSGRTPADLASSIGH-KGIAGYL 804
                D      +G TP   A+   H       L
Sbjct: 134 -----DVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 51.7 bits (125), Expect = 3e-07
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 10/63 (15%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH+A   G         +     AG N++ +++ G +AL  A        +  L     A
Sbjct: 181 LHWAVLAGN---TT--VISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

Query: 772 PGA 774
            G 
Sbjct: 236 KGY 238

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 68.3 bits (168), Expect = 5e-12
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 25/126 (19%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A+  G    ++   V        ++N +   G++ LH AA  G    V  L+  GA 
Sbjct: 315 LHVASHYGN---IK--LVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA- 368

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 831
                 P      G TP  +A  +G+  +   L      ++     +   D         
Sbjct: 369 -----SPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSF----VLVSDKH-----RM 414

Query: 832 TAVQTV 837
           +  +TV
Sbjct: 415 SFPETV 420

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 66.7 bits (164), Expect = 1e-11
 Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 30/130 (23%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +   +  LH AA  G+    E             +N +  +  T LH AA  G    V  
Sbjct: 44  NVKVETPLHMAARAGH---TE--VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKL 98

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDG 823
           L+   A      +P     +G TP  +A+  GH      L        L    S      
Sbjct: 99  LLENNA------NPNLATTAGHTPLHIAAREGHVETVLAL--------LEKEASQACMTK 144

Query: 824 DVAEVTGATA 833
                 G T 
Sbjct: 145 K-----GFTP 149

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 66.7 bits (164), Expect = 1e-11
 Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AA  G+   +E  TV        +       G+T LH AA  G+ R    
Sbjct: 110 TTAGHTPLHIAAREGH---VE--TVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 164

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+   A       P     +G TP  +A    +  I   L
Sbjct: 165 LLERDA------HPNAAGKNGLTPLHVAVHHNNLDIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 66.4 bits (163), Expect = 2e-11
 Identities = 32/130 (24%), Positives = 46/130 (35%), Gaps = 30/130 (23%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVA 763
           +  G   LH  A  G+        VA      GV ++     G+T LH A++ G  + V 
Sbjct: 275 NKSGLTPLHLVAQEGH------VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK 328

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 823
            L+   A      D   K   G +P   A+  GH  I   L ++         S N+   
Sbjct: 329 FLLQHQA------DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG-------ASPNEVSS 375

Query: 824 DVAEVTGATA 833
           D     G T 
Sbjct: 376 D-----GTTP 380

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.6 bits (161), Expect = 3e-11
 Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH A        L+   V      G + +    NG+T LH AA   +     S
Sbjct: 176 GKNGLTPLHVAVHHNN---LD--IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARS 230

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  G           +   G TP  LA+  GH  +   L
Sbjct: 231 LLQYGG------SANAESVQGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 1e-10
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 20/99 (20%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G++      +G T LH A++ G    V +L+  GA       P        TP  +A+  
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARA 57

Query: 796 GHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
           GH  +A YL        L     +N K  D       T 
Sbjct: 58  GHTEVAKYL--------LQNKAKVNAKAKD-----DQTP 83

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.7 bits (156), Expect = 1e-10
 Identities = 26/100 (26%), Positives = 33/100 (33%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AA  G+    E   V        N N  + +G T LH  A  G       
Sbjct: 242 SVQGVTPLHLAAQEGH---AE--MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADV 296

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           LI  G               G TP  +AS  G+  +  +L
Sbjct: 297 LIKHGV------MVDATTRMGYTPLHVASHYGNIKLVKFL 330

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.7 bits (156), Expect = 1e-10
 Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AA       +E          G + N   V G T LH AA  G    VA 
Sbjct: 209 AWNGYTPLHIAAKQNQ---VE--VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 263

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L++  A      +      SG TP  L +  GH  +A  L
Sbjct: 264 LLSKQA------NGNLGNKSGLTPLHLVAQEGHVPVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 47.1 bits (113), Expect = 2e-05
 Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 20/104 (19%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AA  G+    +   V      G + N    +G T L  A   G       
Sbjct: 341 TKLGYSPLHQAAQQGH---TD--IVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDV 395

Query: 765 LIALGAAPGALSDPTPKYPSGRTPA-------DLASSIGHKGIA 801
           L  +     +            +         D++   G + I+
Sbjct: 396 LKVVTDE-TS--FVLVSDKHRMSFPETVDEILDVSEDEGEELIS 436

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 62.4 bits (153), Expect = 5e-12
 Identities = 32/93 (34%), Positives = 38/93 (40%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH AA  G+    E   V      G ++N R  +G T LH AA  G    V  L+A GA 
Sbjct: 13  LHNAAKNGH---AE--EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA- 66

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D   +   G TP  LA   GH  I   L
Sbjct: 67  -----DVNARSKDGNTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 54.3 bits (132), Expect = 4e-09
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 28/102 (27%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G        +G T LH AA  G    V  L++ GA      D   +   G TP  LA+  
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGA------DVNARSKDGNTPLHLAAKN 52

Query: 796 GHKGIAGYLAESDLSSALSAIS----LNKKDGDVAEVTGATA 833
           GH  I   L           ++    +N +  D     G T 
Sbjct: 53  GHAEIVKLL-----------LAKGADVNARSKD-----GNTP 78

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 52.4 bits (127), Expect = 2e-08
 Identities = 22/84 (26%), Positives = 27/84 (32%), Gaps = 16/84 (19%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
              G   LH AA  G+    E   V      G ++N R  +G T  H A   G    V  
Sbjct: 39  SKDGNTPLHLAAKNGH---AE--IVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKL 93

Query: 765 LIALGAAPGALSDPTPKYPSGRTP 788
           L A GA      D   +       
Sbjct: 94  LDAKGA------DVNARSWGSSHH 111

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 62.7 bits (154), Expect = 5e-12
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH AA  G+   LE   V     AG ++N +D NG T LH AA  G    V  L+  GA 
Sbjct: 39  LHLAARNGH---LE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA- 92

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D   K  +GRTP  LA+  GH  +   L
Sbjct: 93  -----DVNAKDKNGRTPLHLAARNGHLEVVKLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 62.4 bits (153), Expect = 6e-12
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH AA  G+   LE   V     AG ++N +D NG T LH AA  G    V  L+  GA 
Sbjct: 6   LHLAARNGH---LE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA- 59

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                D   K  +GRTP  LA+  GH  +   L
Sbjct: 60  -----DVNAKDKNGRTPLHLAARNGHLEVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 53.9 bits (131), Expect = 6e-09
 Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 26/93 (27%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           NG T LH AA  G    V  L+  GA      D   K  +GRTP  LA+  GH  +   L
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLHLAARNGHLEVVKLL 54

Query: 805 AESDLSSALSAIS----LNKKDGDVAEVTGATA 833
                      +     +N KD +     G T 
Sbjct: 55  -----------LEAGADVNAKDKN-----GRTP 71

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 50.8 bits (123), Expect = 7e-08
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 10/59 (16%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH AA  G+   LE   V     AG ++N +D NG T LH AA  G    V  L+  GA
Sbjct: 72  LHLAARNGH---LE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 65.3 bits (160), Expect = 7e-12
 Identities = 27/146 (18%), Positives = 44/146 (30%), Gaps = 31/146 (21%)

Query: 699 AAEGGKGPCVLDHCGQGV---------LHFAAALGYDWALEPTTVAGVNINFRDVNGWTA 749
             + G  P  +                   AA    + AL    +   +++  D NG TA
Sbjct: 22  EWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALS-QLLEDRDVDAVDENGRTA 80

Query: 750 LHWAAYCGRERTVASLIALGAAPGALSDPTPK-YPSGRTPADLASSIGHKGIAGYLAESD 808
           L + A  G ++ V  L   GA      D   +    G T   +A+      +   L    
Sbjct: 81  LLFVAGLGSDKCVRLLAEAGA------DLDHRDMRGGLTALHMAAGYVRPEVVEAL---- 130

Query: 809 LSSALSA-ISLNKKDGDVAEVTGATA 833
               +     +  +D       G TA
Sbjct: 131 ----VELGADIEVEDER-----GLTA 147

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 21/126 (16%), Positives = 26/126 (20%), Gaps = 35/126 (27%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH AA        E   V      G +I   D  G TAL  A    +     + +  G  
Sbjct: 115 LHMAAGYVR---PE--VVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 169

Query: 772 PGALSDPTP-----------------KYPSGRTPADLASSIGHKGIAGYLA-------ES 807
            G                        K   G+    L                       
Sbjct: 170 IGL-EKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAK 228

Query: 808 DLSSAL 813
           D    L
Sbjct: 229 DYEDGL 234

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 44.9 bits (107), Expect = 5e-05
 Identities = 14/100 (14%), Positives = 24/100 (24%), Gaps = 22/100 (22%)

Query: 734 VAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793
           V  +  +     G          G   +      + A      D   +     TP   A+
Sbjct: 3   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA------DVVSE---YETPWWTAA 53

Query: 794 SIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 833
               +     L        L    ++  D +     G TA
Sbjct: 54  RKADEQALSQL--------LEDRDVDAVDEN-----GRTA 80

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 14/116 (12%)

Query: 698 KAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHW 752
             +     P  L + G+  L FAA +G     E   V      G +I  +D  G T LH 
Sbjct: 106 TGSVFHYRPHNLIYYGEHPLSFAACVGS---EE--IVRLLIEHGADIRAQDSLGNTVLHI 160

Query: 753 AAYCGRERTVAS----LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                 +         L++        S        G TP  LA   G+  +  +L
Sbjct: 161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 717 LHFAAALGYDWALEPTTVA------GVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           L  AA       ++   ++      G  ++ R   G TALH AA          L+    
Sbjct: 7   LLLAAKEND---VQ--ALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP 61

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                   T +   G+T   +A    +  +   L
Sbjct: 62  ELVF-EPMTSELYEGQTALHIAVINQNVNLVRAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 27/110 (24%), Positives = 34/110 (30%), Gaps = 18/110 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---AGVNI-----NFRDVNGWTALHWAAYCGRERT 761
              G+  LH AA       LE   V   A   +           G TALH A        
Sbjct: 34  GAMGETALHIAALYDN---LEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNL 90

Query: 762 VASLIALGA-------APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           V +L+A GA              P      G  P   A+ +G + I   L
Sbjct: 91  VRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 24/115 (20%), Positives = 34/115 (29%), Gaps = 29/115 (25%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVN-------------GWTALH 751
            + GQ  LH A        +    V      G +++ R                G   L 
Sbjct: 72  LYEGQTALHIAVINQN---VN--LVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLS 126

Query: 752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           +AA  G E  V  LI  GA      D   +   G T   +     +K  A  +  
Sbjct: 127 FAACVGSEEIVRLLIEHGA------DIRAQDSLGNTVLHILILQPNKTFACQMYN 175

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 11/71 (15%), Positives = 17/71 (23%), Gaps = 10/71 (14%)

Query: 710 DHCGQGVLHFAAALGY-DWALEPTTV---AGVNIN------FRDVNGWTALHWAAYCGRE 759
           D  G  VLH         +A +   +        +        +  G T    A   G  
Sbjct: 151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210

Query: 760 RTVASLIALGA 770
                L+    
Sbjct: 211 VMFQHLMQKRK 221

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 61.7 bits (151), Expect = 2e-11
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 7/70 (10%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
               I+    +    L  AA  G+  TV  L+  GA      DP      GR P  +   
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA------DPNALNRFGRRPIQVMMM 54

Query: 795 IGHKGIAGYL 804
            G   +A  L
Sbjct: 55  -GSAQVAELL 63

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 57.8 bits (141), Expect = 4e-10
 Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 735 AGVNINFRDVNGWT-ALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793
            G   N  D    T  +H AA  G   T+  L   GA              GR P DLA 
Sbjct: 66  HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA------RLDVCDAWGRLPVDLAE 119

Query: 794 SIGHKGIAGYL 804
             GH+ IA YL
Sbjct: 120 EQGHRDIARYL 130

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 51.7 bits (125), Expect = 6e-08
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 10/59 (16%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           +H AA  G+   L+  T+     AG  ++  D  G   +  A   G       L A   
Sbjct: 82  VHDAAREGF---LD--TLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 17/97 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A             V     AG N+N  D +GWT LH AA C       +L+  GAA
Sbjct: 58  LHNAICGAN---YS--IVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA 112

Query: 772 PGALSDPTPKYPSGRTPADLASSI--GHKGIAGYLAE 806
             A +        G T  +       G+   A YLA+
Sbjct: 113 IFATTL-----SDGATAFEKCDPYREGYADCATYLAD 144

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 25/97 (25%), Positives = 31/97 (31%), Gaps = 16/97 (16%)

Query: 713 GQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIA 767
              +L  AA  G    LE   V        + +  +  G TALH A        V  LI 
Sbjct: 21  PLVLLLDAALTGE---LE--VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLIT 75

Query: 768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            GA      +       G TP   A+S     I   L
Sbjct: 76  AGA------NVNSPDSHGWTPLHCAASCNDTVICMAL 106

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 46.9 bits (112), Expect = 9e-06
 Identities = 13/72 (18%), Positives = 19/72 (26%), Gaps = 9/72 (12%)

Query: 736 GVNINFRD---VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
             +        +N    L  AA  G    V   +          DP+     G T    A
Sbjct: 8   AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN------DPSQPNEEGITALHNA 61

Query: 793 SSIGHKGIAGYL 804
               +  I  +L
Sbjct: 62  ICGANYSIVDFL 73

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 10/30 (33%), Positives = 12/30 (40%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
             V +  RD    T   WAA  G+E  V  
Sbjct: 177 ESVTVLRRDGPEETDWWWAALHGQEGYVPR 206

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 64.4 bits (158), Expect = 2e-11
 Identities = 25/105 (23%), Positives = 34/105 (32%), Gaps = 14/105 (13%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
           +H AA  G+  +L      G  +N    +  + LH A   G    V  L+  GA      
Sbjct: 63  MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA------ 116

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYL--------AESDLSSAL 813
                     TP   A   G       L         ESDL+S +
Sbjct: 117 QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPI 161

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 63.3 bits (155), Expect = 6e-11
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 17/100 (17%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +      +H AA  G+   +E   V      G NI+ +  +  T L+ A    +   V  
Sbjct: 154 ESDLASPIHEAARRGH---VE--CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           L+  GA                +P         + +A  L
Sbjct: 209 LLESGADVNQGKG-------QDSPLHAVVRTASEELACLL 241

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 57.9 bits (141), Expect = 4e-09
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 9/93 (9%)

Query: 713 GQGVLHFAAALGY-DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
            QG +  +   G  D+         +  +   V+ W+ +H AA  G + ++ +LI+ G  
Sbjct: 27  KQGGMDGSKPAGPRDFPGIRLLSNPLMGD--AVSDWSPMHEAAIHGHQLSLRNLISQGW- 83

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                          +P   A   GH      L
Sbjct: 84  -----AVNIITADHVSPLHEACLGGHLSCVKIL 111

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 54.4 bits (132), Expect = 5e-08
 Identities = 16/86 (18%), Positives = 25/86 (29%), Gaps = 17/86 (19%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           L+ A             V     +G ++N +     + LH       E     L+  GA 
Sbjct: 194 LYLACENQQ---RA--CVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGA- 246

Query: 772 PGALSDPTPKYPSGRTPADLASSIGH 797
                D   K   G+ P +L      
Sbjct: 247 -----DTQAKNAEGKRPVELVPPESP 267

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 42.5 bits (101), Expect = 4e-04
 Identities = 8/59 (13%), Positives = 12/59 (20%), Gaps = 11/59 (18%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA 770
           LH           E          G +   ++  G   +              L   GA
Sbjct: 226 LHAVVRTAS---EE--LACLLMDFGADTQAKNAEGKRPVELVPPESPL-AQLFLEREGA 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 64.4 bits (158), Expect = 2e-11
 Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 30/135 (22%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  G   LH A  +      +   V      G +   R  NG T    AA  G  + +  
Sbjct: 36  EEGGWTPLHNAVQMSR---ED--IVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL 90

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA-ISLNKKDG 823
            ++ GA      D       G T    A+  G      +L             ++N +  
Sbjct: 91  FLSKGA------DVNECDFYGFTAFMEAAVYGKVKALKFL--------YKRGANVNLRRK 136

Query: 824 DVAEVT-----GATA 833
              +       GATA
Sbjct: 137 TKEDQERLRKGGATA 151

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 62.9 bits (154), Expect = 9e-11
 Identities = 24/99 (24%), Positives = 33/99 (33%), Gaps = 9/99 (9%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTT----VAGVNINFRDVNGWTALHWAAYCGRERTVASL 765
           D+ G+  L  A     D  +E  T      G ++N R   G T L  A        V  L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           +          +       G+T   LA  +  K IA  L
Sbjct: 239 L---EQEHI--EINDTDSDGKTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 62.1 bits (152), Expect = 1e-10
 Identities = 35/141 (24%), Positives = 48/141 (34%), Gaps = 32/141 (22%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYC 756
            +    L   G   L  AA  G+   +E   +       G ++N  D  G  AL  A   
Sbjct: 138 KEDQERLRKGGATALMDAAEKGH---VE--VLKILLDEMGADVNACDNMGRNALIHALLS 192

Query: 757 GRERTVAS----LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSA 812
             +  V +    L+  GA      D   +   G+TP  LA    H G+   L    L   
Sbjct: 193 SDDSDVEAITHLLLDHGA------DVNVRGERGKTPLILAVEKKHLGLVQRL----LEQE 242

Query: 813 LSAISLNKKDGDVAEVTGATA 833
              I +N  D D     G TA
Sbjct: 243 --HIEINDTDSD-----GKTA 256

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 53.2 bits (129), Expect = 1e-07
 Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 11/67 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV------AGVNINFRDVNGWTALHWAAYCGRERTVA 763
              G+  L  A    +   L    V        + IN  D +G TAL  A     ++   
Sbjct: 216 GERGKTPLILAVEKKH---LG--LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270

Query: 764 SLIALGA 770
            L   GA
Sbjct: 271 LLCKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 45.5 bits (109), Expect = 4e-05
 Identities = 16/96 (16%), Positives = 24/96 (25%), Gaps = 27/96 (28%)

Query: 743 DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPK-YPSGRTPADLASSIGHKGIA 801
            V     L  A        V  L+  GA      +   +    G TP   A  +  + I 
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGA------NVNFQEEEGGWTPLHNAVQMSREDIV 55

Query: 802 GYLAESDLSSALSAIS----LNKKDGDVAEVTGATA 833
             L           +        +  +     GAT 
Sbjct: 56  ELL-----------LRHGADPVLRKKN-----GATP 75

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 13/93 (13%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A   G+    E   V      GVN+N  D +GWT LH AA C   +    L+  GAA
Sbjct: 74  LHNAVCAGH---TE--IVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
             A+   T                G+   + +L
Sbjct: 129 VFAM---TYSDMQTAADKCEEMEEGYTQCSQFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 18/95 (18%), Positives = 26/95 (27%), Gaps = 7/95 (7%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           +  GQ  L                  G+ + F        L  ++  G    V  +I   
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP-LPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                  DP+     G T    A   GH  I  +L
Sbjct: 61  D------DPSLPNDEGITALHNAVCAGHTEIVKFL 89

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 16/97 (16%)

Query: 713 GQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIA 767
              +L  ++  G     +   V        + +  +  G TALH A   G    V  L+ 
Sbjct: 37  PLALLLDSSLEGE---FD--LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ 91

Query: 768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            G       +       G TP   A+S  +  +  +L
Sbjct: 92  FGV------NVNAADSDGWTPLHCAASCNNVQVCKFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 44.5 bits (106), Expect = 6e-05
 Identities = 13/129 (10%), Positives = 31/129 (24%), Gaps = 21/129 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNG---WTALHWAAYCGRERT 761
           D  G   LH AA+      ++         +G  +     +              G  + 
Sbjct: 100 DSDGWTPLHCAASCNN---VQ--VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 154

Query: 762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK 821
              L  +    G ++                       +   + E D  + +     ++ 
Sbjct: 155 SQFLYGVQEKMGIMNK------GVIYALWDYEPQNDDELP--MKEGDCMTIIHREDEDEI 206

Query: 822 DGDVAEVTG 830
           +   A +  
Sbjct: 207 EWWWARLND 215

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 63.7 bits (156), Expect = 4e-11
 Identities = 16/90 (17%), Positives = 20/90 (22%), Gaps = 16/90 (17%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           LH A             +     AG +   R   G T L  A           L A GA 
Sbjct: 196 LHLAVEAQA---AS--VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA- 249

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIA 801
                          +P   + S       
Sbjct: 250 -----PEPEDGGDKLSPCSSSGSDSDSDNR 274

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 63.3 bits (155), Expect = 5e-11
 Identities = 23/157 (14%), Positives = 33/157 (21%), Gaps = 28/157 (17%)

Query: 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-----AGV 737
              LL+ +             +                +        E           +
Sbjct: 94  ACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNP----ENEEEPRDEDWRL 149

Query: 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH 797
            +   + +G T LH A        V  L   GA              GRTP  LA     
Sbjct: 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP-----TCGRTPLHLAVEAQA 204

Query: 798 KGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
             +   L        L A      +        G T 
Sbjct: 205 ASVLELL--------LKAGADPTARMYG-----GRTP 228

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 59.5 bits (145), Expect = 9e-10
 Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 17/101 (16%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVN-GWTALHWAAYCGRERTVA 763
           ++ G   LH A         E   V     AG ++N  +   G T LH A        + 
Sbjct: 155 NYDGHTPLHVAVIHKD---AE--MVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLE 209

Query: 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            L+  GA      DPT +   GRTP   A    +  +A  L
Sbjct: 210 LLLKAGA------DPTARMYGGRTPLGSALLRPNPILARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 59.5 bits (145), Expect = 1e-09
 Identities = 30/138 (21%), Positives = 41/138 (29%), Gaps = 32/138 (23%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           +  GQ  LH AA LG        TV     AG  +   +  G TALH A           
Sbjct: 42  NDLGQTALHLAAILGE---AS--TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96

Query: 765 LIALGAAPGA---------LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA 815
           L+    +              D TP   +   PA + S    +       E         
Sbjct: 97  LLQPRPSHPRDASDTYLTQSQDCTPD--TSHAPAAVDSQPNPENEEEPRDED------WR 148

Query: 816 ISLNKKDGDVAEVTGATA 833
           + L  ++ D     G T 
Sbjct: 149 LQLEAENYD-----GHTP 161

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 23/96 (23%), Positives = 30/96 (31%), Gaps = 19/96 (19%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVN---INFRDVNGWTALHWAAYCGRERTVASLIAL 768
           LH A    +        +            ++ ++  G TALH AA  G   TV  L A 
Sbjct: 13  LHLAVIHQH---EP--FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           GA              G T   LA  +     A  L
Sbjct: 68  GA------GVLVAERGGHTALHLACRVRAHTCACVL 97

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 52.9 bits (128), Expect = 2e-07
 Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 17/96 (17%)

Query: 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
             +   +G TALH A     E  +  L+   A    L     +   G+T   LA+ +G  
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL---QNDLGQTALHLAAILGEA 58

Query: 799 GIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
                L         +A   +   +       G TA
Sbjct: 59  STVEKL--------YAAGAGVLVAERG-----GHTA 81

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 61.0 bits (149), Expect = 5e-11
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 12/98 (12%)

Query: 735 AGVNINFRDVNGWT-ALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793
            G   N  D    T  +H AA  G   T+  L   GA          +   GR P DLA 
Sbjct: 66  HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA------RLDVRDAWGRLPVDLAE 119

Query: 794 SIGHKGIAGYL----AESDLSSALSAISLNKKDGDVAE 827
            +GH+ +A YL      +  S+     +      D+ +
Sbjct: 120 ELGHRDVARYLRAAAGGTRGSNHARIDAAE-GPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 59.8 bits (146), Expect = 1e-10
 Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 21/90 (23%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           +H AA  G+   L+  T+     AG  ++ RD  G   +  A   G       L A    
Sbjct: 82  VHDAAREGF---LD--TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136

Query: 772 PGALSDPTPKYPSGRTPADLASSIGHKGIA 801
                        G   A + ++ G   I 
Sbjct: 137 -----------TRGSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 53.2 bits (129), Expect = 2e-08
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 9/70 (12%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
                +         L  AA  GR   V +L+  GA      +P      GR P  +   
Sbjct: 3   PAAGSSMEP--SADWLATAAARGRVEEVRALLEAGA------NPNAPNSYGRRPIQVMMM 54

Query: 795 IGHKGIAGYL 804
            G   +A  L
Sbjct: 55  -GSARVAELL 63

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 685 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV 744
           K   + L  W+V+K     +             +          L+   +    +N +D 
Sbjct: 222 KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
           NG T L+ AA  G    V +L+  GA      DP     SG  P D  
Sbjct: 282 NGDTCLNIAARLGNISIVDALLDYGA------DPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 22/137 (16%)

Query: 709 LDHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVNGWTALHWAAY---CGRER 760
           +D  G   LH+  ++     LE   V      G N  + D  G + L  A          
Sbjct: 127 VDEHGNTPLHWLTSIAN---LE--LVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTP----ADLASSIGHKGIAGYLAESDLSSALSAI 816
           T  +L+        L D        RT        +   G    A Y  +  +   +   
Sbjct: 182 TFEALLDYLYPCLILED-----SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 236

Query: 817 SLNKKDGDVAEVTGATA 833
           +   + G   + +    
Sbjct: 237 NRPIQSGTNEKESKPND 253

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 54.3 bits (130), Expect = 8e-08
 Identities = 20/117 (17%), Positives = 32/117 (27%), Gaps = 15/117 (12%)

Query: 718 HFAAALGYDWALEPTTVAGVNINF-RDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
           H +         +      +N+N   D +G T LHW         V  L+  G+      
Sbjct: 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS------ 155

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 833
           +       G +    A    +   +G      L   L    L  +D         T 
Sbjct: 156 NRLYGDNMGESCLVKAVKSVNNYDSGTFEA--LLDYL-YPCLILEDSM-----NRTI 204

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 61.4 bits (150), Expect = 3e-10
 Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 26/121 (21%)

Query: 717 LHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG 773
           LH AA L      +   +   +G++ +  D  G TAL++A   G  +TV   +       
Sbjct: 66  LHQAATLED---TKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW--- 119

Query: 774 ALSDPTPKYPSG-RTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGAT 832
                     +G +T    A  +    I  Y         LS I               +
Sbjct: 120 ---RLMFYGKTGWKTSFYHAVMLNDVSIVSYF--------LSEIPSTFDLAI-----LLS 163

Query: 833 A 833
            
Sbjct: 164 C 164

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 59.8 bits (146), Expect = 9e-10
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 22/100 (22%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
           +  +    DV+G +A ++A      R V +L+  GA                 P   A++
Sbjct: 20  SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGA------LKNLL--ENEFPLHQAAT 71

Query: 795 IGHKGIAGYLAESDLSSALSA-ISLNKKDGDVAEVTGATA 833
           +    I   L        L + +  ++ D       G TA
Sbjct: 72  LEDTKIVKIL--------LFSGLDDSQFDDK-----GNTA 98

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 56.8 bits (138), Expect = 8e-09
 Identities = 11/93 (11%), Positives = 20/93 (21%), Gaps = 16/93 (17%)

Query: 717 LHFAAALGYDWALEPTTV----AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
            + A  L     +    V    + +   F      + +H     G    +  L+      
Sbjct: 133 FYHAVMLND---VS--IVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMT-- 185

Query: 773 GALSDPTPKYPSGRTPA-DLASSIGHKGIAGYL 804
                          P   LA       +   L
Sbjct: 186 ----STNTNNSLLFIPDIKLAIDNKDIEMLQAL 214

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 49.8 bits (120), Expect = 2e-06
 Identities = 8/114 (7%), Positives = 24/114 (21%), Gaps = 31/114 (27%)

Query: 717 LHFAAALGYDWALEPTTV-----AGVNINFRDVNGWT-ALHWAAYCGRERTVASLIALGA 770
           +H     G+   ++   +        + N  +   +   +  A        + +L     
Sbjct: 165 IHITIKNGH---VD--MMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDI 219

Query: 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGD 824
                        +  +       +    IA  + E         +        
Sbjct: 220 -------------NIYSANLENVLLDDAEIAKMIIEKH-------VEYKSDSYT 253

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 59.4 bits (144), Expect = 9e-10
 Identities = 25/129 (19%), Positives = 32/129 (24%), Gaps = 25/129 (19%)

Query: 717 LHFAAALGYDWALE--------------PTTVAGVNINFRDVNGWTALHWAAYCGRERTV 762
           L  A     D                  P  +           G +ALH A      + V
Sbjct: 47  LMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCV 106

Query: 763 ASLIALGA-----APGALSDPTPKYPS--GRTPADLASSIGHKGIAGYLAESDLSSALSA 815
             L+  GA     A G             G  P  LA+      +  YL    L +    
Sbjct: 107 KLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL----LENPHQP 162

Query: 816 ISLNKKDGD 824
            SL   D  
Sbjct: 163 ASLEATDSL 171

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 50.2 bits (120), Expect = 8e-07
 Identities = 18/95 (18%), Positives = 25/95 (26%), Gaps = 23/95 (24%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G  VLH                    +   +    +AL    Y G  +  A L    
Sbjct: 169 DSLGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMGARLCPTV 211

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                          G TP  LA+  G   I  ++
Sbjct: 212 Q------LEEISNHQGLTPLKLAAKEGKIEIFRHI 240

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 13/108 (12%), Positives = 27/108 (25%), Gaps = 16/108 (14%)

Query: 713 GQGVLHFAAALG--------YDWALEPTTVAGVNINFRDVNGWTALHWAA---YCGRERT 761
            +  L    + G         ++    +     +       G T L  A      G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 762 VASLIALGAAPGAL-----SDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           +  L+ +    G       +  T ++  G +   +A           L
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLL 109

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 48.2 bits (115), Expect = 4e-06
 Identities = 17/107 (15%), Positives = 24/107 (22%), Gaps = 26/107 (24%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRDVN-------------GWTALH 751
            + G   LH A             V      G +++ R                G   L 
Sbjct: 87  FYQGHSALHIAIEKRS-----LQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLS 141

Query: 752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
            AA   +   V  L+     P   +        G T       I   
Sbjct: 142 LAACTKQWDVVTYLLENPHQP---ASLEATDSLGNTVLHALVMIADN 185

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 8/63 (12%), Positives = 14/63 (22%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           +      L      G                  +  G T L  AA  G+      ++   
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244

Query: 770 AAP 772
            + 
Sbjct: 245 FSG 247

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 23/134 (17%), Positives = 32/134 (23%), Gaps = 26/134 (19%)

Query: 713 GQGVLHFAAALGYDWALE--------------PTTVAGVNINFRDVNGWTALHWAAYCGR 758
           G+  L  A         +                             G TALH A     
Sbjct: 46  GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC 105

Query: 759 ERTVASLIALGA--------APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS 810
           +  V  L+  GA              D    +  G  P  LA+      I  YL      
Sbjct: 106 KHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL----TE 161

Query: 811 SALSAISLNKKDGD 824
           +      L ++D  
Sbjct: 162 NGHKQADLRRQDSR 175

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 27/108 (25%)

Query: 717 LHFAAALGYDWALEPTTV--------AGVNINFRDVNGWTALHWAAYCGRERT------- 761
           L  AA         P  V           ++  +D  G T LH                 
Sbjct: 144 LSLAACTNQ-----PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVT 198

Query: 762 --VASLIALGA---APGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                L+   A       L         G +P  +A+  G  GI  ++
Sbjct: 199 KMYDLLLIKCAKLFPDTNLEALLNND--GLSPLMMAAKTGKIGIFQHI 244

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 16/78 (20%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV---------AGVNIN-------FRDVNGWTALHWA 753
           D  G  VLH   A+  +       V             +          + +G + L  A
Sbjct: 173 DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232

Query: 754 AYCGRERTVASLIALGAA 771
           A  G+      +I    A
Sbjct: 233 AKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 12/81 (14%)

Query: 736 GVNINFRDV----NGWTALHWAAYC---GRERTVASLIALGAAPGAL-----SDPTPKYP 783
              +   +      G T L  A      GR  T+  L+ +    G +     S     Y 
Sbjct: 32  KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYY 91

Query: 784 SGRTPADLASSIGHKGIAGYL 804
            G+T   +A     K     L
Sbjct: 92  RGQTALHIAIERRCKHYVELL 112

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 57.5 bits (139), Expect = 5e-09
 Identities = 19/98 (19%), Positives = 30/98 (30%), Gaps = 12/98 (12%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA--------APGALSDPTPKYPSGR 786
              +       G TALH A        V  L+  GA             +   P +  G 
Sbjct: 90  VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGE 149

Query: 787 TPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGD 824
            P  LA+      I  +L ++    A     ++ +D  
Sbjct: 150 LPLSLAACTNQLAIVKFLLQNSWQPA----DISARDSV 183

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 16/104 (15%)

Query: 717 LHFAAALGYDWALE-------PTTVAGVNINFRDV-NGWTALHWA---AYCGRERTVASL 765
           +  A A      LE        +     +  F+D   G T L  A    + G+  T+A L
Sbjct: 17  IFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALL 76

Query: 766 IALGAAPGALS-----DPTPKYPSGRTPADLASSIGHKGIAGYL 804
           + +     +L        T  Y  G+T   +A    +  +   L
Sbjct: 77  LDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 27/126 (21%), Positives = 41/126 (32%), Gaps = 27/126 (21%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTV--------AGVNINFRDVNGWTALHWAA 754
                   + G+  L  AA       L    V           +I+ RD  G T LH   
Sbjct: 138 KTKGRPGFYFGELPLSLAACTNQ---LA--IVKFLLQNSWQPADISARDSVGNTVLHALV 192

Query: 755 YCGRERTVAS---------LIALGA---APGALSDPTPKYPSGRTPADLASSIGHKGIAG 802
                    +         ++ LGA       L + T +   G TP  LA+S G  G+  
Sbjct: 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK--GLTPLALAASSGKIGVLA 250

Query: 803 YLAESD 808
           Y+ + +
Sbjct: 251 YILQRE 256

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 51.7 bits (124), Expect = 4e-07
 Identities = 18/123 (14%), Positives = 32/123 (26%), Gaps = 27/123 (21%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFRD--------------VNGWTAL 750
            + GQ  LH A           T V      G ++                    G   L
Sbjct: 98  YYKGQTALHIAIERRN-----MTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPL 152

Query: 751 HWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS 810
             AA   +   V  L+     P   +D + +   G T       +    +      + + 
Sbjct: 153 SLAACTNQLAIVKFLLQNSWQP---ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209

Query: 811 SAL 813
           + +
Sbjct: 210 NEI 212

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 15/105 (14%), Positives = 23/105 (21%), Gaps = 29/105 (27%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVA----------------GVNINFRDVNGWTALHWA 753
           D  G  VLH    +  +       V                        +  G T L  A
Sbjct: 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240

Query: 754 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798
           A  G+   +A ++                         A+   H 
Sbjct: 241 ASSGKIGVLAYILQREI-------------HEPECRHAAAHHHHH 272

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 31/156 (19%), Positives = 47/156 (30%), Gaps = 18/156 (11%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
            + A +   D   E            D +  TALHWA   G    V  L+ LG       
Sbjct: 11  CNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV------ 64

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQT 836
               K  +G +P  +A+S G   I   L             +N  + +     G T +  
Sbjct: 65  PVNDKDDAGWSPLHIAASAGXDEIVKALLV-------KGAHVNAVNQN-----GCTPLHY 112

Query: 837 VPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAAR 872
              +    ++   L  G +          A   AA 
Sbjct: 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAA 148

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 18/167 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D  G   LH AA+ G D  ++   V G ++N  + NG T LH+AA   R      L+  G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 829
           A      +P  K     T    A++ G+  +   L            S N +D +     
Sbjct: 130 A------NPDAKDHYDATAMHRAAAKGNLKMVHILLF-------YKASTNIQDTE----- 171

Query: 830 GATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQV 876
           G T +           +   +  G S+       +   Q A     +
Sbjct: 172 GNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGL 218

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.1 bits (130), Expect = 4e-08
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 11/143 (7%)

Query: 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
           +V+     G     ++  G   LH+AA+             G N + +D    TA+H AA
Sbjct: 88  IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAA 147

Query: 755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALS 814
             G  + V  L+   A          +   G TP  LA        A +L         +
Sbjct: 148 AKGNLKMVHILLFYKA------STNIQDTEGNTPLHLACDEERVEEAKFLVTQG-----A 196

Query: 815 AISLNKKDGDVAEVTGATAVQTV 837
           +I +  K+           +  +
Sbjct: 197 SIYIENKEEKTPLQVAKGGLGLI 219

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 27/110 (24%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
           +     EGG  P   DH     +H AAA G    +        + N +D  G T LH A 
Sbjct: 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180

Query: 755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
              R      L+  GA          +    +TP  +A   G  G+    
Sbjct: 181 DEERVEEAKFLVTQGA------SIYIENKEEKTPLQVAK--GGLGLILKR 222

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 6/61 (9%)

Query: 744 VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGY 803
           V+     + A     +     ++A  +        T      RT    A S GH  I  +
Sbjct: 5   VSNIMICNLAYSGKLDELKERILADKS------LATRTDQDSRTALHWACSAGHTEIVEF 58

Query: 804 L 804
           L
Sbjct: 59  L 59

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 9/92 (9%)

Query: 713 GQGVLHFAAALGYDWAL---EPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
            + VLH A  +    +L   +     G +++ +  +G TALH+AA   +   +  L+   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
           A             +G T  D+A    HK   
Sbjct: 250 A------LVGTVNEAGETALDIARKKHHKECE 275

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 10/132 (7%)

Query: 674 SSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPT 732
           +      + V+      L            K P    H   +  LH A       +L   
Sbjct: 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIV 188

Query: 733 ---TVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPA 789
                   N++ +   G TALH+         +  L+   A+    +       SG TP 
Sbjct: 189 DFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN------ESGETPL 242

Query: 790 DLASSIGHKGIA 801
           D+A  + H+   
Sbjct: 243 DIAKRLKHEHCE 254

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.0 bits (134), Expect = 5e-08
 Identities = 83/617 (13%), Positives = 162/617 (26%), Gaps = 205/617 (33%)

Query: 3   DSRRFALGNQLDIEQILIEAQHR-------WL---RPAEIC-----EILR-NYTKF---R 43
           D  +  L  + +I+ I++            W    +  E+      E+LR NY KF    
Sbjct: 40  DMPKSILSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY-KFLMSP 97

Query: 44  IAPESPHTPPSGSLFLFDRKVL----RYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVL 99
           I  E         +++  R  L    + F K  +  R +     +++A   L+     ++
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPY-LKLRQALLELRPAKNVLI 155

Query: 100 H--------CYYAHGEENENFQRRS----YWMLEEELSHIVLVHYREVKGNRTNFNRAKV 147
                            +   Q +     +W+                     N      
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL---------------------NLKNCNS 194

Query: 148 AEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASE-YEDA---- 202
            E       E  + +         S   H ++ ++   +    L     S+ YE+     
Sbjct: 195 PETVL----EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 203 ESVYNNQA------------SSRFHSFLDL------QQPVAEKIDAGLADPYYPSSLTNN 244
            +V N +A            ++RF    D            +     L      S L   
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 245 YQGKFSVVPG-ADFISP----------------------AQTDKSRNSNDTGL----TYE 277
              +   +P      +P                         DK     ++ L      E
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 278 PQKNLD----FPSWEDVLQNCSQGVGSQPEALGDIPNQGYDIL-GEPFTNSFGERKEFGS 332
            +K  D    FP                      IP     ++  +   +   +     +
Sbjct: 371 YRKMFDRLSVFP--PSA----------------HIPTILLSLIWFDVIKS---DVMVVVN 409

Query: 333 HLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAH-DLTSQSCEQGAAHDGLLDSLRPPHAH 391
            L             S +   P +  + + S + +L  +   + A H  ++D    P   
Sbjct: 410 KLHKY----------SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 392 PNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFN- 450
            +      + +P     +                FYS  I  HL   + E  +++  F  
Sbjct: 460 DS-----DDLIPPYLDQY----------------FYSH-IGHHLK--NIEHPERMTLFRM 495

Query: 451 -----RWMSKELGDVKESNMQSSSGAYWETVES-ENGVDDSGVSPQARLDTYMM-----S 499
                R++ +++               W    S  N +          L  Y        
Sbjct: 496 VFLDFRFLEQKI---------RHDSTAWNASGSILNTLQQ--------LKFYKPYICDND 538

Query: 500 PSLSQDQLYSIIDFSPN 516
           P   +  + +I+DF P 
Sbjct: 539 PKYER-LVNAILDFLPK 554

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 1e-07
 Identities = 91/645 (14%), Positives = 173/645 (26%), Gaps = 176/645 (27%)

Query: 280 KNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGE 339
            N D    +D+ ++    + S+ E   D       I+        G  + F + L ++ E
Sbjct: 31  DNFDCKDVQDMPKS----ILSKEEI--D------HIIMSK-DAVSGTLRLFWT-LLSKQE 76

Query: 340 WQASRNDSSHLS---NWPMD--QKVYLDSAHDLTSQSCEQGAAHDGLLDSLR--PPHAHP 392
               +     L     + M   +      +              D L +  +    +   
Sbjct: 77  EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI----EQRDRLYNDNQVFAKYNVS 132

Query: 393 NMENDVHEQLPNAEHGHLLKSDPESSLTIDG-----KS-FYSSAIKQHLIDGSTEGLKKL 446
            ++   + +L  A    LL+  P  ++ IDG     K+         + +          
Sbjct: 133 RLQP--YLKLRQA----LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV---------Q 177

Query: 447 DSFNR---WMSKELGDVKES-----NMQS----SSGAYWETVESENGVDDSGVSPQARLD 494
              +    W++  L +          +Q         +    +  + +     S QA L 
Sbjct: 178 CKMDFKIFWLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 495 TYMMSPSLSQDQLYSIID--FSPN-WAYVSSEVKVLITGR------FLMSQQEAENC--K 543
             + S       L  ++    +   W   +   K+L+T R      FL +          
Sbjct: 236 RLLKSKPYENCLL--VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 544 WSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCS----EVREFEYRASH 599
            S      EV   ++    L C     +   +P  V  +N    S     +R+       
Sbjct: 294 HSMTLTPDEV-KSLLLK-YLDC-----RPQDLPREVLTTNPRRLSIIAESIRDG------ 340

Query: 600 IPDVDVADNCGDITSENLR-MQFGKLLCLTSVSTPNYDPSNLSD------ISQLNSKIS- 651
                        T +N + +   KL  +   S    +P+          +   ++ I  
Sbjct: 341 -LA----------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT 389

Query: 652 ---SLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK-----------LQVWLVQ 697
              SL+      W     +   +      V  KL +  L EK           + + L  
Sbjct: 390 ILLSLI------WF---DVIKSD---VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV 437

Query: 698 KAAEGG----------KGPCVLDHCGQGVLH----FAAALGYDWALEPTTVAGVNINFRD 743
           K                 P   D       +    F + +G+   L+          FR 
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--LKNIEHPERMTLFRM 495

Query: 744 VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTP------KY-----PSGRTPADLA 792
           V  +    +            +     A  A             Y      +      L 
Sbjct: 496 V--FLDFRFLE--------QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545

Query: 793 SSIGH--KGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQ 835
           ++I      I   L  S  +  L  I+L  +D  + E      VQ
Sbjct: 546 NAILDFLPKIEENLICSKYTDLLR-IALMAEDEAIFE-EAHKQVQ 588

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 18/182 (9%)

Query: 635 YDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 694
           ++  N  +  QL      L ++    +    +L+       E +   L      E+++  
Sbjct: 7   HNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQL 66

Query: 695 LVQKAAEGGKG-------PCVLDHCGQGVLHFAAALGYDWALEPTTV-----AGVNINFR 742
           L    A   +                + +   AA  G   AL+  T+     +   +   
Sbjct: 67  LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALD--TLCLLLTSDEIVKVI 124

Query: 743 DVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAG 802
               + A   AA  G    +  L  L                      LA+  GH  +  
Sbjct: 125 QAENYQAFRLAAENGHLHVLNRLCELAPTE----IMAMIQAENYHAFRLAAENGHLHVLN 180

Query: 803 YL 804
            L
Sbjct: 181 RL 182

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 15/102 (14%), Positives = 28/102 (27%), Gaps = 17/102 (16%)

Query: 713 GQGVLHFAAALGYDWALE--------PTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS 764
           G  +L        +  L+        P   A         +    L  A   G +   A 
Sbjct: 278 GFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACAL 337

Query: 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           L+++ +   AL+     Y        +  + G   +     E
Sbjct: 338 LLSIPSVL-ALTKANNYY--------INETGGRLDLRAVALE 370

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 49.8 bits (118), Expect = 2e-06
 Identities = 26/110 (23%), Positives = 34/110 (30%), Gaps = 6/110 (5%)

Query: 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
               L  A A     A E     G N+N  D  G   LH A   G        +  GA  
Sbjct: 235 NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294

Query: 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKD 822
           GA          GR P  +A    +  I   L  + +  A +A      +
Sbjct: 295 GARD------SEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDE 338

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 49.1 bits (117), Expect = 4e-06
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 37/171 (21%)

Query: 662 DLMLKLTAEEKFSSEEVKE-----KLVQKLLKEKLQ---------------VWLVQKAAE 701
               K +AE   S    +      K V+     +                 + +++  A 
Sbjct: 98  HGGPKPSAE---SDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFAN 154

Query: 702 GGKGPCVL-----DHCGQGVLHFAAALGYDWALEPTTVA---GVNINFRDVNGWTALHWA 753
           G      L         + VLH A  +    +L         G +++ +  +G TALH+A
Sbjct: 155 GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 214

Query: 754 AYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           A   +   +  L+   A  G ++       +G T  D+A    HK     L
Sbjct: 215 ALYNQPDCLKLLLKGRALVGTVN------EAGETALDIARKKHHKECEELL 259

>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A Length = 138

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 9/100 (9%)

Query: 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHT- 567
            I   SP+  + +    V+I G                +FG + V +E++    +R  T 
Sbjct: 7   CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTP 59

Query: 568 SSQKVGRVPFYVTCSNRLSCSEVR-EFEYRASHIPDVDVA 606
                G V   ++  ++  C      F Y A + P +D  
Sbjct: 60  PRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYG 99

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	911
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	9e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	9e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	0.004
d2cxka1	82	b.1.18.1 (A:872-953) Calmodulin binding transcript	6e-11
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-10
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-09
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	6e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	0.002
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	0.002
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-09
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-08
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-08
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.001
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.003
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-07
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	7e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-07
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	6e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.002
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.003
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.004
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	7e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.003
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	9e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.002

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 1e-11
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776
           LH A+ +G+   ++     G + N  +V   T LH AA  G       L+   A      
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA------ 57

Query: 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
               K    +TP   A+ IGH  +   L E
Sbjct: 58  KVNAKAKDDQTPLHCAARIGHTNMVKLLLE 87

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 9e-11
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           + G         G   LH A+  G    ++       ++N +   G++ LH AA  G   
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 344

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            V  L+  GA       P      G TP  +A  +G+  +   L
Sbjct: 345 IVTLLLKNGA------SPNEVSSDGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 20/78 (25%), Positives = 31/78 (39%)

Query: 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
           +V+   + G  P V +   +  LH AA  G+    +        +N +  +  T LH AA
Sbjct: 15  IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA 74

Query: 755 YCGRERTVASLIALGAAP 772
             G    V  L+   A P
Sbjct: 75  RIGHTNMVKLLLENNANP 92

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 6/104 (5%)

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           E       +   G   LH AA  G     E       + N    NG T LH A +     
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 179

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
            V  L+  G        P     +G TP  +A+      +A  L
Sbjct: 180 IVKLLLPRGG------SPHSPAWNGYTPLHIAAKQNQVEVARSL 217

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 16/77 (20%), Positives = 24/77 (31%)

Query: 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALH 751
            + LV+   +           G   LH AA  G+   +      G + N    +G T L 
Sbjct: 309 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 368

Query: 752 WAAYCGRERTVASLIAL 768
            A   G       L  +
Sbjct: 369 IAKRLGYISVTDVLKVV 385

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 7e-06
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 748 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 807
           T LH A++ G    V +L+  GA       P        TP  +A+  GH  +A YL ++
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARAGHTEVAKYLLQN 55

Query: 808 DLSSALSAISLNKKDGD 824
                     +N K  D
Sbjct: 56  K-------AKVNAKAKD 65

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 9e-06
 Identities = 33/157 (21%), Positives = 44/157 (28%), Gaps = 39/157 (24%)

Query: 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765
                  G   LH AA  G+   +        N N  + +G T LH  A  G       L
Sbjct: 224 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 283

Query: 766 IALGAAPGALSDP--TP-------------------------KYPSGRTPADLASSIGHK 798
           I  G    A +    TP                         K   G +P   A+  GH 
Sbjct: 284 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343

Query: 799 GIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQ 835
            I   L ++         S N+   D     G T + 
Sbjct: 344 DIVTLLLKNG-------ASPNEVSSD-----GTTPLA 368

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 4e-05
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 6/110 (5%)

Query: 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALH 751
           +V + +   E    P      G   LH A        ++     G + +    NG+T LH
Sbjct: 144 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLH 203

Query: 752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIA 801
            AA   +     SL+  G +  A S        G TP  LA+  GH  + 
Sbjct: 204 IAAKQNQVEVARSLLQYGGSANAESVQ------GVTPLHLAAQEGHAEMV 247

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.004
 Identities = 23/130 (17%), Positives = 33/130 (25%), Gaps = 39/130 (30%)

Query: 710 DHCGQGVLHFAAALGY---------------------------------DWALEPTTVAG 736
               Q  LH AA +G+                                    +       
Sbjct: 63  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG 796
            +       G+T LH AA  G+ R    L+   A       P     +G TP  +A    
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA------HPNAAGKNGLTPLHVAVHHN 176

Query: 797 HKGIAGYLAE 806
           +  I   L  
Sbjct: 177 NLDIVKLLLP 186

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 82

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 6e-11
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 510 IIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS 569
           + D+SP W+Y    VKVLITG +        +  +SC+F +I VPA ++  GVLRC+  +
Sbjct: 2   VTDYSPEWSYPEGGVKVLITGPWQE-----ASNNYSCLFDQISVPASLIQPGVLRCYCPA 56

Query: 570 QKVGRVPFYVTCSNRLSCSEVREFEYR 596
              G V   V  +N++  + V  FEY+
Sbjct: 57  HDTGLVTLQVAFNNQIISNSV-VFEYK 82

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.5 bits (145), Expect = 2e-10
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 9/112 (8%)

Query: 684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWA---LEPTTVAGVNIN 740
               K  L + +     +  +      +  +   +       D     L+   +    +N
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 741 FRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
            +D NG T L+ AA  G    V +L+  GA      DP     SG  P D  
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGA------DPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 9e-06
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 1/94 (1%)

Query: 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739
           E  +Q+LL  ++Q        +            Q   H +         +      +N+
Sbjct: 40  EAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNL 99

Query: 740 NFR-DVNGWTALHWAAYCGRERTVASLIALGAAP 772
           N   D +G T LHW         V  L+  G+  
Sbjct: 100 NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR 133

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (93), Expect = 6e-04
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
           D  G   L+ AA LG    ++     G +    + +G   + + A
Sbjct: 256 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 10/97 (10%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
              G   LH AAA GY   L+    A  ++N +D +GWT LH AA+ G+E     L+   
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
                  D       G+T  D+A     + I GYL E
Sbjct: 256 C------DMEAVNKVGQTAFDVAD----EDILGYLEE 282

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.5 bits (93), Expect = 6e-04
 Identities = 21/82 (25%), Positives = 27/82 (32%), Gaps = 6/82 (7%)

Query: 725 YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPS 784
              A +      +N      +G TALH AA  G    +  LI          D   K   
Sbjct: 178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY------DVNIKDYD 231

Query: 785 GRTPADLASSIGHKGIAGYLAE 806
           G TP   A+  G +     L E
Sbjct: 232 GWTPLHAAAHWGKEEACRILVE 253

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 12/49 (24%), Positives = 18/49 (36%)

Query: 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754
             + D+ G   LH AA  G + A         ++   +  G TA   A 
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 10/59 (16%), Positives = 15/59 (25%), Gaps = 6/59 (10%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGY 803
           +       A   G    V  L+  GA      D       G T    A    +  +  +
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGA------DINYANVDGLTALHQACIDDNVDMVKF 91

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 57.1 bits (136), Expect = 3e-09
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTT-VAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768
            + G+  LH+AA +     ++      G N + +D +G T +  AA  GR   V  LI  
Sbjct: 184 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 243

Query: 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           GA             +  T   LA +  H  I    
Sbjct: 244 GA------SVEAVDATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 49.3 bits (116), Expect = 7e-07
 Identities = 13/73 (17%), Positives = 19/73 (26%)

Query: 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753
            +     E G      D  G+  +  AA  G    +      G ++   D    TA   A
Sbjct: 202 IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 261

Query: 754 AYCGRERTVASLI 766
                   V    
Sbjct: 262 QANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.6 bits (114), Expect = 1e-06
 Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 4/74 (5%)

Query: 717 LHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP--GA 774
           LH   A G     EP T   VNI     +  T LHW A          LI   A     A
Sbjct: 6   LH-TEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAA 63

Query: 775 LSDPTPKYPSGRTP 788
            +D         TP
Sbjct: 64  GADVNAMDCDENTP 77

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 54.9 bits (131), Expect = 2e-08
 Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 16/164 (9%)

Query: 646 LNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG 705
           +++   SL+     +   +            +  E++ Q L          + A +    
Sbjct: 32  ISANELSLMTLSYKEAIHIF-------LPGTKNMEQVRQLLCLYYAHY--NRNAKQLWSD 82

Query: 706 PCVLDHCGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHWAAYCGRERTV 762
                   + +   AA  G   AL+   +   +   +       + A   AA  G    +
Sbjct: 83  AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 142

Query: 763 ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
             L  L                      LA+  GH  +   L E
Sbjct: 143 NRLCELAPTE----IMAMIQAENYHAFRLAAENGHLHVLNRLCE 182

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 48.0 bits (113), Expect = 3e-06
 Identities = 15/152 (9%), Positives = 34/152 (22%), Gaps = 4/152 (2%)

Query: 656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK-AAEGGKGPCV--LDHC 712
            E           A    +       ++  LL   + +   +    E G+      +   
Sbjct: 186 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARH 245

Query: 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772
              +     A           +   +   +       L           +  L+++    
Sbjct: 246 VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIK 305

Query: 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
                 T           LA  +G++G    L
Sbjct: 306 ALAPTATIPG-DANELLRLALRLGNQGACALL 336

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 15/103 (14%), Positives = 26/103 (25%), Gaps = 5/103 (4%)

Query: 708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN--GWTALHWAAYCGRERTVASL 765
           V+          AA  G+   L              +    + A   AA  G    +  L
Sbjct: 121 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 180

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808
             L       +    +  +       A   GH  +  +L +  
Sbjct: 181 CELAPTE---ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 220

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 14/131 (10%), Positives = 27/131 (20%), Gaps = 11/131 (8%)

Query: 649 KISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-----G 703
            + + L D              E                 +++         +G      
Sbjct: 211 NVINFLLDCPVMLAYAEIH-EFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT 269

Query: 704 KGPCVLDHCGQGVLHFAAALGYDWALE-----PTTVAGVNINFRDVNGWTALHWAAYCGR 758
           K  C+        L           +      P   A         +    L  A   G 
Sbjct: 270 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 329

Query: 759 ERTVASLIALG 769
           +   A L+++ 
Sbjct: 330 QGACALLLSIP 340

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 2e-08
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 5/87 (5%)

Query: 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEP-TTVAGVNINFRDVNGW 747
           E +   L+   A+      V    G+  L  A    +   ++       + IN  D +G 
Sbjct: 199 EAITHLLLDHGAD----VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK 254

Query: 748 TALHWAAYCGRERTVASLIALGAAPGA 774
           TAL  A     ++    L   GA+   
Sbjct: 255 TALLLAVELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 3e-08
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 5/72 (6%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS 794
            G ++N R   G T L  A        V  L+          +       G+T   LA  
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI-----EINDTDSDGKTALLLAVE 262

Query: 795 IGHKGIAGYLAE 806
           +  K IA  L +
Sbjct: 263 LKLKKIAELLCK 274

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 0.001
 Identities = 40/173 (23%), Positives = 50/173 (28%), Gaps = 53/173 (30%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV----------NGWTALHW 752
           G      D  G      AA  G   AL+     G N+N R             G TAL  
Sbjct: 95  GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154

Query: 753 AAYCGRERTVASLIA-LGAAPGALS-------------------------------DPTP 780
           AA  G    +  L+  +GA   A                                 D   
Sbjct: 155 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214

Query: 781 KYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATA 833
           +   G+TP  LA    H G+   L E +       I +N  D D     G TA
Sbjct: 215 RGERGKTPLILAVEKKHLGLVQRLLEQE------HIEINDTDSD-----GKTA 256

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.003
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 716 VLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTV 762
           +L  A        ++     G N+NF++   GWT LH A    RE  V
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIV 55

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.4 bits (116), Expect = 4e-07
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           D+ G+  LH+AAA+    A+    +   N + +D    T L  AA  G      +L+   
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179

Query: 770 AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYL 804
           A      +        R P D+AS   H  I   L
Sbjct: 180 A------NREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.8 bits (91), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 735 AGVNINFR-DVNGWTALHWAAYCGRERTVASL 765
            G  +N   D  G T+LH AA   R      L
Sbjct: 11  QGAELNATMDKTGETSLHLAARFARADAAKRL 42

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 5e-07
 Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 701 EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER 760
           EGG  P   DH     +H AAA G    +        + N +D  G T LH A    R  
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 183

Query: 761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
               L++ GA          +    +TP  +A   G   I   + E
Sbjct: 184 EAKLLVSQGA------SIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-04
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTP 788
           G  +N  + NG T LH+AA   R      L+  GA      +P  K     T 
Sbjct: 93  GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA------NPDAKDHYEATA 139

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.3 bits (116), Expect = 6e-07
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH 797
             +   +G TALH A     E  +  L+   A    L     +   G+T   LA+ +G 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL---QNDLGQTALHLAAILGE 57

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.5 bits (114), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 12/37 (32%)

Query: 735 AGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771
           AG +   R   G T L  A           L A GA 
Sbjct: 214 AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 3/50 (6%)

Query: 713 GQGVLHFAAALGYDWALEPTTVAGVN---INFRDVNGWTALHWAAYCGRE 759
           G   LH A    ++  L+           ++ ++  G TALH AA  G  
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 30/262 (11%), Positives = 61/262 (23%), Gaps = 33/262 (12%)

Query: 544 WSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLSCSEVREFEYRASHIPD 602
            + +         ++       +   Q  +G+   ++      + +  + +   A  +  
Sbjct: 15  LAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVA 74

Query: 603 VDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWD 662
                    +           +L              L          S     ++ D  
Sbjct: 75  ERGGHTALHLACRVRAHTCACVL--------------LQPRPSHPRDASDTYLTQSQDCT 120

Query: 663 LMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAA 722
                      S    + +   +    +LQ+    +  +G     V              
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE--AENYDGHTPLHVAVIHKD-------- 170

Query: 723 LGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 782
              +                   G T LH A        +  L+  GA      DPT + 
Sbjct: 171 --AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA------DPTARM 222

Query: 783 PSGRTPADLASSIGHKGIAGYL 804
             GRTP   A    +  +A  L
Sbjct: 223 YGGRTPLGSALLRPNPILARLL 244

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 2e-06
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765
             V    G+  L  A        ++     G N+N +  +G +ALH A+  G    V +L
Sbjct: 137 DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTL 196

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800
           +  GA      D + K     TP  +A S     I
Sbjct: 197 VRSGA------DSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 3e-05
 Identities = 12/69 (17%), Positives = 24/69 (34%)

Query: 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753
            +VQ   + G       + G   LH A+  G    +     +G + + ++ +  T L  A
Sbjct: 158 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 217

Query: 754 AYCGRERTV 762
                   +
Sbjct: 218 RSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 5e-05
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792
           +G T LH A   G    V  L+ L    G   +        +TP  LA
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLA 47

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 4e-04
 Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 4/48 (8%)

Query: 713 GQGVLHFAAALGYDWA----LEPTTVAGVNINFRDVNGWTALHWAAYC 756
           G   LH A   G   A    +      G  ++  +    T LH A   
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 12/63 (19%), Positives = 20/63 (31%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 762
           G      D      LH+A    +   +E     G +++ +     TA   +   G E   
Sbjct: 90  GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149

Query: 763 ASL 765
             L
Sbjct: 150 EIL 152

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 5e-05
 Identities = 12/77 (15%), Positives = 20/77 (25%)

Query: 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753
            +    + G          G+  LH A  L     +      G ++N     G++     
Sbjct: 126 IVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 185

Query: 754 AYCGRERTVASLIALGA 770
                 R    L  L  
Sbjct: 186 WGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 3e-04
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 707 CVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI-NFRDVNGWTALHWAAYCGRERTVASL 765
              ++ G   LH A+  GY   +E     G ++      NG TALH A        V+ L
Sbjct: 105 KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 164

Query: 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806
           +  GA      D       G +P  L        I   L +
Sbjct: 165 LKCGA------DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 199

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (86), Expect = 0.003
 Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 2/44 (4%)

Query: 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTP 788
           +G + LH A     +     +I       A      +    +TP
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLA--FLNFQNNLQQTP 42

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (85), Expect = 0.004
 Identities = 10/48 (20%), Positives = 14/48 (29%), Gaps = 4/48 (8%)

Query: 713 GQGVLHFAAALGYDWA----LEPTTVAGVNINFRDVNGWTALHWAAYC 756
           G   LH A            +         +NF++    T LH A   
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT 49

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 7e-05
 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTV 762
           G    V D  G   +H A   G+         A  +++ RD  G T L  A   G +  V
Sbjct: 91  GADVNVPDGTGALPIHLAVQEGHTAV-VSFLAAESDLHRRDARGLTPLELALQRGAQDLV 149

Query: 763 ASLI 766
             L 
Sbjct: 150 DILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSI 795
           G ++N  D  G   +H A   G    V+ L A         D   +   G TP +LA   
Sbjct: 91  GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES-------DLHRRDARGLTPLELALQR 143

Query: 796 GHKGIAGYL 804
           G + +   L
Sbjct: 144 GAQDLVDIL 152

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.3 bits (95), Expect = 2e-04
 Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)

Query: 717 LHFAAALG-YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE 759
           LH A     +    E        +  +D +G   LHW+      
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAH 47

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.6 bits (88), Expect = 0.002
 Identities = 10/50 (20%), Positives = 13/50 (26%), Gaps = 5/50 (10%)

Query: 748 TALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGH 797
             LH A        V  L+    +         K   GR P   + S   
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPS-----LLLQKDQDGRIPLHWSVSFQA 46

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (88), Expect = 9e-04
 Identities = 12/82 (14%), Positives = 23/82 (28%)

Query: 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWT 748
           ++  + +V    +           G   LH+         L+       +I   + +G T
Sbjct: 57  DRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGET 116

Query: 749 ALHWAAYCGRERTVASLIALGA 770
            L  A     E     L    +
Sbjct: 117 PLDIAKRLKHEHCEELLTQALS 138

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 738 NINFRDVNGWTALHWAAYCGRERTVASLIALG 769
           N+  R+  G TA   A   GR   V+ + A G
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	911
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.98
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.98
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.98
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.95
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.94
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.91
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.91
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.91
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.91
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.9
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.9
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.9
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.86
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.86
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.85
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.85
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.84
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.84
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.84
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.83
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.8
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.8
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.73
d2cxka1	82	Calmodulin binding transcription activator 1 {Huma	96.63

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-35  Score=244.17  Aligned_cols=82  Identities=13%  Similarity=0.144  Sum_probs=57.0

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH--
Q ss_conf             449899997399189999998899988888988997388999971998612788998871999965457999907773--
Q 002539          539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN--  616 (911)
Q Consensus       539 ~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~--  616 (911)
                      +||||+||..|+.++|+.||+.|++++  ..+..|.||||+||..|+  .+++  ++|+++|++++..+..|.||++.  
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in--~~d~~g~TpL~~A~~~g~--~~iv--~~Ll~~gadi~~~~~~g~t~L~~A~   74 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPN--VSNVKVETPLHMAARAGH--TEVA--KYLLQNKAKVNAKAKDDQTPLHCAA   74 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSC--CSSSCCCCHHHHHHHHTC--HHHH--HHHHHHTCCSSCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf             986999998848999999997878999--889999889999998688--9999--9999885998877999899999999


Q ss_pred             --HHHHHHHHHH
Q ss_conf             --3799999981
Q 002539          617 --LRMQFGKLLC  626 (911)
Q Consensus       617 --~~~~ivkLLl  626 (911)
                        ++.+++++|+
T Consensus        75 ~~g~~~~~~~Ll   86 (408)
T d1n11a_          75 RIGHTNMVKLLL   86 (408)
T ss_dssp             HHTCHHHHHHHH
T ss_pred             HCCCHHHHHHHH
T ss_conf             869977999998

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-34  Score=243.89  Aligned_cols=238  Identities=14%  Similarity=0.016  Sum_probs=179.6

Q ss_pred             CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             8665449899997399189999998899988-888988997388999971998612788998871999965457999907
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRC-HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT  613 (911)
Q Consensus       535 ~~~~~T~LHlAc~fG~~eVv~~LLe~Gadvn-~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~Ta  613 (911)
                      +..+.||||+||..|+.+++++||+.|++.+ ...++..|+||||+||.+|+  .+++  ++|+..|++++..|..|.+|
T Consensus         6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~--~~iv--~~Ll~~ga~i~~~d~~g~tp   81 (255)
T d1oy3d_           6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTV--EKLYAAGAGVLVAERGGHTA   81 (255)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCSSCCCTTSCCH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC--CCCC--CCCCCCCCCCCCCCCCCCHH
T ss_conf             9599789999998588999999998699900115758999972406876245--4323--22223333322322222102


Q ss_pred             HHH----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             773----3799999981289999998999922456788987742105895025999988623989378999999999997
Q 002539          614 SEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       614 L~~----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~  689 (911)
                      ++.    ++..++++|+..............      ......     ..........                ......
T Consensus        82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~----------------~~~~~~  134 (255)
T d1oy3d_          82 LHLACRVRAHTCACVLLQPRPSHPRDASDTY------LTQSQD-----CTPDTSHAPA----------------AVDSQP  134 (255)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred             HHHHHCCCCHHHHHHHHHHCCCHHCCCCHHH------HHHHHH-----HCCCCHHHHH----------------HHHHHC
T ss_conf             3333226825899999861420101220256------667765-----2243067799----------------998620


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             56999999999499999723699993899999919976887587649974324-79997188999981999999999983
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYCGRERTVASLIAL  768 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~r-D~~G~TPLH~AA~~G~~eiVklLL~~  768 (911)
                      .............+..++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|+||||+||..|+.++|++||++
T Consensus       135 ~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~  214 (255)
T d1oy3d_         135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA  214 (255)
T ss_dssp             ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             30678998765328663310046763223332232222221000013331221334443322001233399999999987


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             99999988999999999999999997394999999998299
Q 002539          769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       769 GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl  809 (911)
                      ||+++.      +|..|+||||+|+.+|+.+++++|++.|+
T Consensus       215 gadin~------~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga  249 (255)
T d1oy3d_         215 GADPTA------RMYGGRTPLGSALLRPNPILARLLRAHGA  249 (255)
T ss_dssp             TCCTTC------CCTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred             CCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             899888------79999999999998788999999997698

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-33  Score=230.97  Aligned_cols=250  Identities=14%  Similarity=0.119  Sum_probs=157.5

Q ss_pred             CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             65449899997399189999998899988888988997388999971998612788998871999965457999907773
Q 002539          537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN  616 (911)
Q Consensus       537 ~~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~  616 (911)
                      ...+++++++..|+.++++.|++.|++++  ..+..|.+|||+|+..+.  .+++  ++|+..|++++..+..|.++++.
T Consensus       131 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~--~~~~~~~~~L~~A~~~~~--~~~~--~~Ll~~g~~~~~~~~~~~t~l~~  204 (408)
T d1n11a_         131 KGFTPLHVAAKYGKVRVAELLLERDAHPN--AAGKNGLTPLHVAVHHNN--LDIV--KLLLPRGGSPHSPAWNGYTPLHI  204 (408)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCSSCCCHHHHHHHTTC--HHHH--HHHGGGTCCSCCCCTTCCCHHHH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCCCHH
T ss_conf             46428999987598999999997699888--678767409999998599--9999--99986588400457789971024


Q ss_pred             ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHH--------HHHHHH----HHHCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf             ----37999999812899999989999224567--------889877----42105895025999988623989378999
Q 002539          617 ----LRMQFGKLLCLTSVSTPNYDPSNLSDISQ--------LNSKIS----SLLKDENDDWDLMLKLTAEEKFSSEEVKE  680 (911)
Q Consensus       617 ----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~--------l~~~i~----sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~  680 (911)
                          ....+...|.............+.+....        ++....    .....+..+.++++.++..+..       
T Consensus       205 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~-------  277 (408)
T d1n11a_         205 AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV-------  277 (408)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH-------
T ss_pred             HHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCH-------
T ss_conf             3202104555554320012212477899999999980867675442002211111247899733454302848-------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Q ss_conf             99999999756999999999499999723699993899999919976887587649974324799971889999819999
Q 002539          681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRER  760 (911)
Q Consensus       681 ~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~e  760 (911)
                                   .+++.|++.|++++..+..+.||||.++..+..++++.+++.|+++|.+|.+|.||||+||.+|+.+
T Consensus       278 -------------~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~  344 (408)
T d1n11a_         278 -------------PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD  344 (408)
T ss_dssp             -------------HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             -------------HHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf             -------------9999999779965621023445302210058621355301333322346899999999999868899


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             999999839999998899999999999999999739499999999829978643575458
Q 002539          761 TVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK  820 (911)
Q Consensus       761 iVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd  820 (911)
                      +|++||++||++++      +|..|+||||+|+++||.++|++|....  .+.++..+.+
T Consensus       345 iv~~Ll~~GAd~n~------~d~~G~t~L~~A~~~~~~~iv~~L~~~~--~~~~~~~~~~  396 (408)
T d1n11a_         345 IVTLLLKNGASPNE------VSSDGTTPLAIAKRLGYISVTDVLKVVT--DETSFVLVSD  396 (408)
T ss_dssp             HHHHHHHTTCCSCC------CCSSSCCHHHHHHHTTCHHHHHHHHHHC--CCCSSCC---
T ss_pred             HHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHHH--HCCCCCCCCC
T ss_conf             99999987889988------7999989999999839999999999987--3656456000

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-31  Score=223.81  Aligned_cols=213  Identities=21%  Similarity=0.159  Sum_probs=156.6

Q ss_pred             CHHHHHHHHCCCCHHHHHHH-HCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH-
Q ss_conf             44989999739918999999-8899988888988997388999971998612788998871999965457999907773-
Q 002539          539 AENCKWSCMFGEIEVPAEIV-AGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN-  616 (911)
Q Consensus       539 ~T~LHlAc~fG~~eVv~~LL-e~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~-  616 (911)
                      .+.++.+|..|+++.++.+| +.+.+++  ..|..|+||||+||..|+  .+++  ++++..+......+..+.++++. 
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~--~~D~~G~TpLh~Aa~~g~--~e~~--~~l~~~~~~~~~~~~~~~~~~~~~   77 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLAT--RTDQDSRTALHWACSAGH--TEIV--EFLLQLGVPVNDKDDAGWSPLHIA   77 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGG--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHHTCCSCCCCTTCCCHHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHHHH--HCCC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             7999999996999999999994997476--748999888999998511--0243--322222333332222222332222


Q ss_pred             ---HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             ---3799999981-289999998999922456788987742105895025999988623989378999999999997569
Q 002539          617 ---LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ  692 (911)
Q Consensus       617 ---~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~  692 (911)
                         ++.+++++|+ .+.+.+..                      +..++++|+.++..+...                  
T Consensus        78 ~~~~~~~i~~~Ll~~~~d~~~~----------------------d~~g~tpL~~A~~~~~~e------------------  117 (223)
T d1uoha_          78 ASAGRDEIVKALLGKGAQVNAV----------------------NQNGCTPLHYAASKNRHE------------------  117 (223)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCC----------------------CTTCCCHHHHHHHHTCHH------------------
T ss_pred             CCCCCCCHHHHHHCCCCEEEEE----------------------CCCCCCHHHHHHHCCCHH------------------
T ss_conf             2211110167774068646754----------------------899996626988769899------------------


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             99999999499999723699993899999919976887587649974324799971889999819999999999839999
Q 002539          693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP  772 (911)
Q Consensus       693 ~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdi  772 (911)
                        ++++|++.|++++.++..|.||||+|+..++..++++|+..|+++|.+|.+|+||||+||..|+.++|++||+.||++
T Consensus       118 --~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~  195 (223)
T d1uoha_         118 --IAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASI  195 (223)
T ss_dssp             --HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             --HHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHCCCCC
T ss_conf             --999999878999876899995010232138742023320223201203688874112100258499999999877999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9988999999999999999997394999999998
Q 002539          773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       773 navtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE  806 (911)
                      +.      +|..|+||||+| .+|+.+|+++|+|
T Consensus       196 ~~------~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         196 YI------ENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CC------CCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CC------CCCCCCCHHHHH-HCCCHHHHHCCCC
T ss_conf             88------799999999998-7789999830047

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.4e-29  Score=209.99  Aligned_cols=260  Identities=13%  Similarity=0.060  Sum_probs=174.7

Q ss_pred             CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH-
Q ss_conf             5449899997399189999998899988888988997388999971998612788998871999965457999907773-
Q 002539          538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN-  616 (911)
Q Consensus       538 ~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~-  616 (911)
                      +.|.||+||..|++++++.||+.|++++. ..+..|+||||+|+.+|+  .+++  ++|+..+......+..+.++.+. 
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~-~~~~~g~tpL~~A~~~~~--~eiv--~~L~~~~~~~~~~~~~~~~~~~~~   79 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSR--EDIV--ELLLRHGADPVLRKKNGATPFLLA   79 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHCCC--HHHH--HHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf             84899999982999999999987989682-489999799999998599--9886--552023432222221111146777


Q ss_pred             ---HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--------HHHHHHHCC-C-CCCHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             ---3799999981289999998999922456788--------987742105-8-95025999988623989378999999
Q 002539          617 ---LRMQFGKLLCLTSVSTPNYDPSNLSDISQLN--------SKISSLLKD-E-NDDWDLMLKLTAEEKFSSEEVKEKLV  683 (911)
Q Consensus       617 ---~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~--------~~i~sl~~~-d-~~~~t~Ll~a~~~~~~~~~~~~~~ll  683 (911)
                         +......++.............+........        ......... + ..............+       ...+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~t~L  152 (285)
T d1wdya_          80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG-------ATAL  152 (285)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCC-------CCHH
T ss_pred             HHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC-------CHHH
T ss_conf             643875322113431022101356898636788874001254454431001132321012222201468-------5699


Q ss_pred             HHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999756999999999-499999723699993899999919----9768875876499743247999718899998199
Q 002539          684 QKLLKEKLQVWLVQKAA-EGGKGPCVLDHCGQGVLHFAAALG----YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR  758 (911)
Q Consensus       684 ~~alk~~l~~~Lv~lLl-e~Gadin~~D~~G~TpLHlAA~~G----~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~  758 (911)
                      +.+++.+..+ +++.|+ +.|++++..+..|.++++.+...+    ...++++|+++|++++.+|..|+||||+||..|+
T Consensus       153 ~~A~~~~~~~-~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~  231 (285)
T d1wdya_         153 MDAAEKGHVE-VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH  231 (285)
T ss_dssp             HHHHHHTCHH-HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHCCCHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC
T ss_conf             9999868999-999998456989455467898332233223430179999999997799988668999982411221386


Q ss_pred             HHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             999999998-399999988999999999999999997394999999998299786435754588
Q 002539          759 ERTVASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKK  821 (911)
Q Consensus       759 ~eiVklLL~-~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~  821 (911)
                      .++|++||+ .|++++.      +|..|.||||+|+++|+.+++++|+++|     |+++++|.
T Consensus       232 ~~~v~~lL~~~g~din~------~d~~G~TpL~~A~~~~~~eiv~~Ll~~G-----Ad~n~~d~  284 (285)
T d1wdya_         232 LGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCGDL  284 (285)
T ss_dssp             HHHHHHHHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHS-----SCSCCSSC
T ss_pred             HHHHHHHHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCC
T ss_conf             99999999808999868------7999989999999859799999999879-----89986017

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.98  E-value=7.1e-31  Score=218.62  Aligned_cols=239  Identities=21%  Similarity=0.223  Sum_probs=172.5

Q ss_pred             CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH-
Q ss_conf             5449899997399189999998899988888988997388999971998612788998871999965457999907773-
Q 002539          538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN-  616 (911)
Q Consensus       538 ~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~-  616 (911)
                      +.|+|++||..|++++|++||+.|++++  ..+..|+||||+|+.+|+  .+++  ++|+..+++....+..+.++++. 
T Consensus        40 ~~t~l~~A~~~G~~~~v~~Ll~~Gadvn--~~d~~G~T~L~~A~~~g~--~eiv--~~Ll~~~~~~~~~~~~~~~~L~~a  113 (291)
T d1s70b_          40 DGAVFLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQACIDDN--VDMV--KFLVENGANINQPDNEGWIPLHAA  113 (291)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHCCCTT--CBCTTCCBHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCC--CEEE--EEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             9669999998588999999998799988--668999969999986197--3121--100122233333222323333333


Q ss_pred             ---HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             ---3799999981-28999999899992245678898774210589502599998-862398937899999999999756
Q 002539          617 ---LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKL-TAEEKFSSEEVKEKLVQKLLKEKL  691 (911)
Q Consensus       617 ---~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a-~~~~~~~~~~~~~~ll~~alk~~l  691 (911)
                         ++.++++.|+ .+........ .+.......          ...+....+.. .......... .....    ....
T Consensus       114 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~a----------~~~~~~~~~~~ll~~~~~~~~~-~~~~~----~~~~  177 (291)
T d1s70b_         114 ASCGYLDIAEYLISQGAHVGAVNS-EGDTPLDIA----------EEEAMEELLQNEVNRQGVDIEA-ARKEE----ERIM  177 (291)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHC----------CSHHHHHHHHHHHHHHTCCHHH-HHHHH----HHHH
T ss_pred             CCCCCCCHHHCCCCCCCCCCCCCC-CCCCCCCCC----------CCCCCCHHCCCCCCCCCCCCCC-CCCCC----CCCC
T ss_conf             222211001101246764222224-676422221----------1122200010000024653211-00001----3332


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             99999999949999972369999389999991997688758764997432479997188999981999999999983999
Q 002539          692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA  771 (911)
Q Consensus       692 ~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAd  771 (911)
                      .......+..........+..|.||||+|+..|+.++++.|+..|+++|.+|..|+||||+||..|+.++|++||++|||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gad  257 (291)
T d1s70b_         178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD  257 (291)
T ss_dssp             HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             21100110123211002467898730488876995441013441011242125798899999985989999999987999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             9998899999999999999999739499999999829
Q 002539          772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       772 inavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~g  808 (911)
                      +++      +|..|+||||+|++    +++++|.+..
T Consensus       258 v~~------~d~~G~TaL~~A~e----~~~~~L~~~~  284 (291)
T d1s70b_         258 MEA------VNKVGQTAFDVADE----DILGYLEELQ  284 (291)
T ss_dssp             TTC------CCTTSCCTTTSCCS----GGGHHHHHHH
T ss_pred             CCC------CCCCCCCHHHHHHH----HHHHHHHHHH
T ss_conf             988------68999999999999----8999999986

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=6.4e-31  Score=218.94  Aligned_cols=217  Identities=21%  Similarity=0.230  Sum_probs=168.9

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC---CCCCCHHH
Q ss_conf             4498999973991899999988-9998888898899738899997199861278899887199996545---79999077
Q 002539          539 AENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVA---DNCGDITS  614 (911)
Q Consensus       539 ~T~LHlAc~fG~~eVv~~LLe~-Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~---D~~G~TaL  614 (911)
                      .+|||+||+.|+.++++.||+. +.+++  .++..|+||||+|+..|.  .+++  ++|++.|++++..   +..|.+++
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~--~~d~~G~TpL~~A~~~g~--~~iv--~~Ll~~ga~~~~~~~~~~~~~~~~   74 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLL--QKDQDGRIPLHWSVSFQA--HEIT--SFLLSKMENVNLDDYPDDSGWTPF   74 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTT--CCCTTSCCHHHHHHHTTC--HHHH--HHHHTTCTTCCGGGCCCTTSCCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHCCC--CCCC--CHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             9769999986899999999980998665--659999989999998699--6544--135443012333222322222222


Q ss_pred             HH----HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             73----3799999981-289999998999922456788987742105895025999988623989378999999999997
Q 002539          615 EN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       615 ~~----~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~  689 (911)
                      +.    ...++++.+. .+......                    ..+....++++.+...+...               
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~~~---------------  119 (229)
T d1ixva_          75 HIACSVGNLEVVKSLYDRPLKPDLN--------------------KITNQGVTCLHLAVGKKWFE---------------  119 (229)
T ss_dssp             HHHHHHTCHHHHHHHHSSSSCCCTT--------------------CCCTTSCCHHHHHHHTTCHH---------------
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC--------------------CCCCCCCCCCCCCCCCCHHH---------------
T ss_conf             2111123323333322222222222--------------------23223344332212320034---------------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-
Q ss_conf             56999999999499999723699993899999919976887587649-9743247999718899998199999999998-
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGRERTVASLIA-  767 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~G-adIN~rD~~G~TPLH~AA~~G~~eiVklLL~-  767 (911)
                           +++.+++.|..++.+|..|+||||+|+..|+.+++++|+..| .++|.+|..|+||||+||..|+.++|++||+ 
T Consensus       120 -----~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~  194 (229)
T d1ixva_         120 -----VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK  194 (229)
T ss_dssp             -----HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             -----HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
T ss_conf             -----322221100232124788997350232124533233332222222223566667810221012519999999996


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             3999999889999999999999999973949999999982997
Q 002539          768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       768 ~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~  810 (911)
                      .||++++      +|..|+||||+|+.   .+++++|+++|++
T Consensus       195 ~gad~~~------~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         195 YGAEYDL------VDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HCCCSCC------CCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             CCCCCCC------CCCCCCCHHHHHHH---HHHHHHHHHCCCC
T ss_conf             5999888------58999999999846---7899999976999

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=5.4e-31  Score=219.43  Aligned_cols=231  Identities=16%  Similarity=0.146  Sum_probs=167.0

Q ss_pred             CCCHHHHHHHHCCCCHHHHHH--------HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             654498999973991899999--------988999888889889973889999719986127889988719999654579
Q 002539          537 QEAENCKWSCMFGEIEVPAEI--------VAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADN  608 (911)
Q Consensus       537 ~~~T~LHlAc~fG~~eVv~~L--------Le~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~  608 (911)
                      .+.||||+||..|+.++++.|        ++.|++++  ..+..|+||||+||.+|+  .+++  ++|+..|++++.++.
T Consensus        32 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn--~~d~~G~TpLh~A~~~g~--~~iv--~~Ll~~Gad~n~~~~  105 (277)
T d2fo1e1          32 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN--AMDCDENTPLMLAVLARR--RRLV--AYLMKAGADPTIYNK  105 (277)
T ss_dssp             SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT--CCCTTSCCHHHHHHHHTC--HHHH--HHHHHTTCCSCCCCT
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCC--CCCCCCCEEECCCCCCCC--CCCC--CCCCCCCCCCCCCCC
T ss_conf             9966999999868999999999652367987699764--547888851003433333--3333--333223222332222


Q ss_pred             CCCHHHHH----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             99907773----37999999812899999989999224567889877421058950259999886239893789999999
Q 002539          609 CGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ  684 (911)
Q Consensus       609 ~G~TaL~~----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~  684 (911)
                      .|.|+++.    ++..+.+++......                  ...+...+....+....+...........    ..
T Consensus       106 ~g~t~l~~a~~~~~~~~~~~l~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  163 (277)
T d2fo1e1         106 SERSALHQAAANRDFGMMVYMLNSTKL------------------KGDIEELDRNGMTALMIVAHNEGRDQVAS----AK  163 (277)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHTTSHHH------------------HHTTSCCCTTSCCHHHHHHHSCSTTHHHH----HH
T ss_pred             CCCCCCCCHHHHCCHHHHHHHHHCCCC------------------CCCCCCCCCCCCHHHHHHHHCCCCCCCCC----CC
T ss_conf             222222100110000123444311454------------------22222222211036788875034332222----21


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             9999756999999999499999723699993899999919976887587-649974324799971889999819999999
Q 002539          685 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTT-VAGVNINFRDVNGWTALHWAAYCGRERTVA  763 (911)
Q Consensus       685 ~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLL-e~GadIN~rD~~G~TPLH~AA~~G~~eiVk  763 (911)
                      .....     ............+..+..|+|+||+++..++...+++++ ..+.+++.+|..|+||||+||..|+.++|+
T Consensus       164 ~~~~~-----~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~  238 (277)
T d2fo1e1         164 LLVEK-----GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM  238 (277)
T ss_dssp             HHHHH-----TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred             CCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
T ss_conf             00112-----3322222234555446689870000122333222223222345433346899998999999859899999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9998399999988999999999999999997394999999998
Q 002539          764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       764 lLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE  806 (911)
                      +||++|||+++      +|..|+||||+|+++|+.+|+++|++
T Consensus       239 ~Ll~~gadin~------~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         239 YLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             99987699988------69999999999998598999999997

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-29  Score=205.36  Aligned_cols=212  Identities=16%  Similarity=0.111  Sum_probs=177.0

Q ss_pred             CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             97388999971998612788998871999965457999907773----37999999812899999989999224567889
Q 002539          573 GRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNS  648 (911)
Q Consensus       573 G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~  648 (911)
                      +.+.|+.+|..|+  .+.+. +++...+..++.+|..|+||||+    ++.+++++|...........            
T Consensus         3 ~~~~~~~~a~~G~--~~~v~-~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~------------   67 (223)
T d1uoha_           3 SNLMVCNLAYSGK--LEELK-ESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD------------   67 (223)
T ss_dssp             SSSHHHHHHHTTC--HHHHH-HHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCC------------
T ss_pred             CHHHHHHHHHHCC--HHHHH-HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC------------
T ss_conf             7799999999699--99999-99994997476748999888999998511024332222233333222------------


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             87742105895025999988623989378999999999997569999999994999997236999938999999199768
Q 002539          649 KISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWA  728 (911)
Q Consensus       649 ~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~i  728 (911)
                               ...+++++.+...+..                    .+++.|++.|++++.+|..|+||||+|+..|+.++
T Consensus        68 ---------~~~~~~~~~~~~~~~~--------------------~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~  118 (223)
T d1uoha_          68 ---------DAGWSPLHIAASAGRD--------------------EIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEI  118 (223)
T ss_dssp             ---------TTCCCHHHHHHHHTCH--------------------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             ---------CCCCCCCCCCCCCCCC--------------------CHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHH
T ss_conf             ---------2222332222221111--------------------01677740686467548999966269887698999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             87587649974324799971889999819999999999839999998899999999999999999739499999999829
Q 002539          729 LEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       729 VklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~g  808 (911)
                      +++|+++|++++.+|..|.||||+|+..|+.+++++|+..|++++.      +|..|.||||+|+..|+.+++++|+++|
T Consensus       119 ~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~------~d~~g~TpL~~Aa~~g~~~~v~~LL~~G  192 (223)
T d1uoha_         119 AVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI------QDTEGNTPLHLACDEERVEEAKLLVSQG  192 (223)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEE------CCCCCCCEECCCCCCCCHHHHHHHHHCC
T ss_conf             9999987899987689999501023213874202332022320120------3688874112100258499999999877


Q ss_pred             CCCCCCCCCCCCCCCCCH----HHHCHHHHHHHHH
Q ss_conf             978643575458889907----6311899997662
Q 002539          809 LSSALSAISLNKKDGDVA----EVTGATAVQTVPQ  839 (911)
Q Consensus       809 l~sh~adlnlkd~~G~ta----~~~~~~vV~~Lle  839 (911)
                           ++++.+|..|++|    ..+..++++.|++
T Consensus       193 -----ad~~~~d~~g~tpl~~A~~~~~~i~~~Ll~  222 (223)
T d1uoha_         193 -----ASIYIENKEEKTPLQVAKGGLGLILKRMVE  222 (223)
T ss_dssp             -----CCSCCCCTTSCCHHHHCCTTHHHHHHHHHC
T ss_pred             -----CCCCCCCCCCCCHHHHHHCCCHHHHHCCCC
T ss_conf             -----999887999999999987789999830047

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=1.2e-28  Score=203.93  Aligned_cols=202  Identities=19%  Similarity=0.146  Sum_probs=158.5

Q ss_pred             CHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH----HHHHHHHHH
Q ss_conf             189999998899988888-988997388999971998612788998871999965457999907773----379999998
Q 002539          551 IEVPAEIVAGGVLRCHTS-SQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLL  625 (911)
Q Consensus       551 ~eVv~~LLe~Gadvn~~p-~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~----~~~~ivkLL  625 (911)
                      .|||+.||++|++++  . .+..|.||||+||.+|+  .+++  ++|+..+++++..+..+.++++.    .......+.
T Consensus         2 ~~~v~~Ll~~g~din--~~~d~~G~t~L~~A~~~g~--~e~v--~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~   75 (209)
T d1ot8a_           2 AQVISDLLAQGAELN--ATMDKTGETSLHLAARFAR--ADAA--KRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQIL   75 (209)
T ss_dssp             HHHHHHHHHHHHHHH--HHHHHHCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHCCCCCC--CCCCCCCCCHHHHHHHCCC--HHHH--HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             899999998789868--6769999889999998399--9999--998750223322222222222222222222222222


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             12899999989999224567889877421058950259999886239893789999999999975699999999949999
Q 002539          626 CLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG  705 (911)
Q Consensus       626 l~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gad  705 (911)
                      ...........                    ...+....+.........                    ..+.|...+++
T Consensus        76 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~--------------------~~~~L~~~~~~  115 (209)
T d1ot8a_          76 LRNRATNLNAR--------------------MHDGTTPLILAARLAIEG--------------------MVEDLITADAD  115 (209)
T ss_dssp             HTCTTCCTTCC--------------------CTTCCCHHHHHHHTTCTT--------------------HHHHHHHTTCC
T ss_pred             CCCCCCCCCCC--------------------CCCCCCCCCCCCCCCCHH--------------------HHHHHHHHCCC
T ss_conf             22222223222--------------------222333222222221012--------------------35555310146


Q ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             97236999938999999199768875876499743247999718899998199999999998399999988999999999
Q 002539          706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSG  785 (911)
Q Consensus       706 in~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G  785 (911)
                      ++..+..|+|+||.++..+...+++.++..++++|.+|..|+||||+||.+|+.++|++||++|||++.      +|..|
T Consensus       116 ~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~------~d~~g  189 (209)
T d1ot8a_         116 INAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI------TDHMD  189 (209)
T ss_dssp             TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred             CCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCC------CCCCC
T ss_conf             555577999823000036863145320122223454434445521121032499999999987999988------68999


Q ss_pred             CCHHHHHHHCCCHHHHHHH
Q ss_conf             9999999973949999999
Q 002539          786 RTPADLASSIGHKGIAGYL  804 (911)
Q Consensus       786 ~TPLhlAa~~Gh~eIvk~L  804 (911)
                      +||||+|+++|+.+||++|
T Consensus       190 ~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         190 RLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CCHHHHHHHTTCHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHC
T ss_conf             9999999986879899643

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.9e-28  Score=201.36  Aligned_cols=98  Identities=17%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             99743247999718899998199999999998399999988999999999999999997394999999998299786435
Q 002539          736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA  815 (911)
Q Consensus       736 GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~ad  815 (911)
                      +.+++.+|..|+||||+||..|+.++|++|++++++.+..     ++..|.||||+|+..|+.+++++|+++|     ++
T Consensus       148 ~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~g~TpL~~A~~~~~~~~v~~Ll~~g-----ad  217 (255)
T d1oy3d_         148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP-----EPTCGRTPLHLAVEAQAASVLELLLKAG-----AD  217 (255)
T ss_dssp             GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC-----CCCCCCCCCCCCCCCCHHHHHHHHHHCC-----CC
T ss_conf             8663310046763223332232222221000013331221-----3344433220012333999999999878-----99


Q ss_pred             CCCCCCCCCCH-----HHHCHHHHHHHHHCCCC
Q ss_conf             75458889907-----63118999976625999
Q 002539          816 ISLNKKDGDVA-----EVTGATAVQTVPQRCPT  843 (911)
Q Consensus       816 lnlkd~~G~ta-----~~~~~~vV~~Lle~gA~  843 (911)
                      ++.++..|.+|     ..+..++++.|+++||.
T Consensus       218 in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         218 PTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             888799999999999987889999999976989

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-27  Score=196.76  Aligned_cols=216  Identities=19%  Similarity=0.096  Sum_probs=163.6

Q ss_pred             CCCHHHHHHHHCCCCHHHHHHHH----CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             65449899997399189999998----89998888898899738899997199861278899887199996545799990
Q 002539          537 QEAENCKWSCMFGEIEVPAEIVA----GGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDI  612 (911)
Q Consensus       537 ~~~T~LHlAc~fG~~eVv~~LLe----~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~T  612 (911)
                      .+.||||+||..|+.++++.||+    .|++++  ..+..|+||||+||..|+  .+++  ++|+..+++.+.....+.+
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in--~~d~~g~TpL~~A~~~~~--~~iv--~~Ll~~ga~~~~~~~~~~~   75 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD--IYNNLRQTPLHLAVITTL--PSVV--RLLVTAGASPMALDRHGQT   75 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCEEHHCCCC--CCCC--CCCCCCCCCCCCCCCCCCC
T ss_conf             884299999983999999999998997799777--668999962410001355--3333--3332222233433332223


Q ss_pred             HHHH----HHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             7773----37999999812-899999989999224567889877421058950259999886239893789999999999
Q 002539          613 TSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL  687 (911)
Q Consensus       613 aL~~----~~~~ivkLLl~-ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~al  687 (911)
                      +++.    ....+++.+.. .........                  ........+++........              
T Consensus        76 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~~~~~~--------------  123 (228)
T d1k1aa_          76 AAHLACEHRSPTCLRALLDSAAPGTLDLE------------------ARNYDGLTALHVAVNTECQ--------------  123 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCTTSCCTT------------------CCCTTSCCHHHHHHHHTCH--------------
T ss_pred             CCCCCCCCCCCCCHHHHHHCCCCCCCCCC------------------CCCCCCCCCCCCCCCCCCC--------------
T ss_conf             33222223452100234420454322322------------------3333222222222222210--------------


Q ss_pred             HHHHHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             975699999999949999-9723699993899999919976887587649974324799971889999819999999999
Q 002539          688 KEKLQVWLVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLI  766 (911)
Q Consensus       688 k~~l~~~Lv~lLle~Gad-in~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL  766 (911)
                            .....+.....+ .......+.++||.|+..+...+++.++..|.+++.+|..|.||||+||.+|+.++|++||
T Consensus       124 ------~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll  197 (228)
T d1k1aa_         124 ------ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV  197 (228)
T ss_dssp             ------HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred             ------HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             ------01344300123322221000255788988751002344322202232221236861689999858799999999


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             839999998899999999999999999739499999
Q 002539          767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAG  802 (911)
Q Consensus       767 ~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk  802 (911)
                      ++|||+++      +|..|.||||+|+++|+.++++
T Consensus       198 ~~Gad~n~------~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         198 RSGADSSL------KNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HTTCCTTC------CCTTSCCTTTTCSSHHHHHHHT
T ss_pred             HCCCCCCC------CCCCCCCHHHHHHHCCCCCCCC
T ss_conf             87899988------7899999999998687703538

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=197.47  Aligned_cols=193  Identities=18%  Similarity=0.128  Sum_probs=154.7

Q ss_pred             CCHHHHHHHHCCCCHH----HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             5449899997399189----999998899988888988997388999971998612788998871999965457999907
Q 002539          538 EAENCKWSCMFGEIEV----PAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT  613 (911)
Q Consensus       538 ~~T~LHlAc~fG~~eV----v~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~Ta  613 (911)
                      +.||||+|+..|..++    ++.++..|++++  ..+..|+||||+||.+|+  .+++  ++|++.|++++..+..|.+|
T Consensus         2 G~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in--~~d~~g~TpLh~A~~~~~--~~iv--~~L~~~g~d~~~~d~~g~t~   75 (221)
T d1iknd_           2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLN--FQNNLQQTPLHLAVITNQ--PEIA--EALLGAGCDPELRDFRGNTP   75 (221)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCC--CCCTTCCCHHHHHHHTTC--HHHH--HCCCSCCCCSCCCCTTCCCH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCCC--CCCC--CCCCCCCCCCCCCCCCCCCC
T ss_conf             87299999985899999999999986799753--678999954634334332--2233--33222222222232232222


Q ss_pred             HHH----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             773----3799999981289999998999922456788987742105895025999988623989378999999999997
Q 002539          614 SEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       614 L~~----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~  689 (911)
                      ++.    +...++++|+......                                                         
T Consensus        76 l~~~~~~~~~~~~~~l~~~~~~~---------------------------------------------------------   98 (221)
T d1iknd_          76 LHLACEQGCLASVGVLTQSCTTP---------------------------------------------------------   98 (221)
T ss_dssp             HHHHHHHTCHHHHHHHHHSTTTT---------------------------------------------------------
T ss_pred             CCCCCCCCCCCCCCHHHHHCCCC---------------------------------------------------------
T ss_conf             22233322222111011101323---------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             569999999994999997236999938999999199768875876499743247-9997188999981999999999983
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIAL  768 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD-~~G~TPLH~AA~~G~~eiVklLL~~  768 (911)
                                 ............|.||||.|+..++...+++|+..|+.++.++ .+|+||||+|+..|+.++|++||++
T Consensus        99 -----------~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~  167 (221)
T d1iknd_          99 -----------HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC  167 (221)
T ss_dssp             -----------SSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             -----------CCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf             -----------332222222334321356775559822301001368631122446777843111122248988889863


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             999999889999999999999999973949999999982997
Q 002539          769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS  810 (911)
Q Consensus       769 GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~  810 (911)
                      |||+++      +|..|+||||+|+..++.+++++|++....
T Consensus       168 gad~~~------~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         168 GADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             TCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             CCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             886456------699998999999987889999999982873

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.95  E-value=1.4e-26  Score=190.25  Aligned_cols=232  Identities=18%  Similarity=0.124  Sum_probs=178.8

Q ss_pred             CHHHHHHHHCCCCCCCCCCC-------CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH----HHH
Q ss_conf             18999999889998888898-------8997388999971998612788998871999965457999907773----379
Q 002539          551 IEVPAEIVAGGVLRCHTSSQ-------KVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRM  619 (911)
Q Consensus       551 ~eVv~~LLe~Gadvn~~p~d-------~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~----~~~  619 (911)
                      .+.++.++....+.......       ..|.|+|+.||..|+  .+++  ++|++.|+++|..|..|.|||+.    ++.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~G~--~~~v--~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~   86 (291)
T d1s70b_          11 NEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGD--TEEV--LRLLERGADINYANVDGLTALHQACIDDNV   86 (291)
T ss_dssp             HHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTC--HHHH--HHHHHHCCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred             HHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             999999973764336711211344568899669999998588--9999--999987999886689999699999861973


Q ss_pred             HHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999812-89999998999922456788987742105895025999988623989378999999999997569999999
Q 002539          620 QFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK  698 (911)
Q Consensus       620 ~ivkLLl~-ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~l  698 (911)
                      +++++|+. +.+....                      +..+.++++.++..+...                    +++.
T Consensus        87 eiv~~Ll~~~~~~~~~----------------------~~~~~~~L~~a~~~~~~~--------------------~~~~  124 (291)
T d1s70b_          87 DMVKFLVENGANINQP----------------------DNEGWIPLHAAASCGYLD--------------------IAEY  124 (291)
T ss_dssp             HHHHHHHHTTCCTTCC----------------------CTTSCCHHHHHHHHTCHH--------------------HHHH
T ss_pred             EEEEEECCCCCCCCCC----------------------CCCCCCCCCCCCCCCCCC--------------------HHHC
T ss_conf             1211001222333332----------------------223233333332222110--------------------0110


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-C--------------------------CCCCCCCCCCCCHHH
Q ss_conf             9949999972369999389999991997688758764-9--------------------------974324799971889
Q 002539          699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-G--------------------------VNINFRDVNGWTALH  751 (911)
Q Consensus       699 Lle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~-G--------------------------adIN~rD~~G~TPLH  751 (911)
                      +++.|+..+..|..+.+++++|+..+....++.++.. |                          .+....+..|.||||
T Consensus       125 l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  204 (291)
T d1s70b_         125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH  204 (291)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHH
T ss_conf             12467642222246764222211122200010000024653211000013332211001101232110024678987304


Q ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-HHHC
Q ss_conf             999819999999999839999998899999999999999999739499999999829978643575458889907-6311
Q 002539          752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTG  830 (911)
Q Consensus       752 ~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-~~~~  830 (911)
                      +|+..|+.++++.|++.|++++.      ++..|+||||+|+..|+.+++++|+++|     ++++.+|+.|.|| .++.
T Consensus       205 ~a~~~~~~~~~~~Ll~~g~din~------~~~~g~TpL~~A~~~g~~~iv~lLl~~G-----adv~~~d~~G~TaL~~A~  273 (291)
T d1s70b_         205 VAAAKGYTEVLKLLIQARYDVNI------KDYDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKVGQTAFDVAD  273 (291)
T ss_dssp             HHHHHTCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTSCC
T ss_pred             HHHHCCCHHHHCCCCCCEECCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHH
T ss_conf             88876995441013441011242------1257988999999859899999999879-----999886899999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             899997662
Q 002539          831 ATAVQTVPQ  839 (911)
Q Consensus       831 ~~vV~~Lle  839 (911)
                      .+++..|.+
T Consensus       274 e~~~~~L~~  282 (291)
T d1s70b_         274 EDILGYLEE  282 (291)
T ss_dssp             SGGGHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             989999999

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=2.3e-25  Score=182.21  Aligned_cols=217  Identities=18%  Similarity=0.137  Sum_probs=173.3

Q ss_pred             CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH----HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             7388999971998612788998871999965457999907773----3799999981-2899999989999224567889
Q 002539          574 RVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNS  648 (911)
Q Consensus       574 ~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~----~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~  648 (911)
                      .+|||+||..|+  .+++. .++...+..++.+|..|.|||+.    ++.+++++|+ .+++++...             
T Consensus         1 n~pLh~A~~~g~--~~~v~-~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~-------------   64 (229)
T d1ixva_           1 NYPLHQACMENE--FFKVQ-ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD-------------   64 (229)
T ss_dssp             CCHHHHHHHHTC--HHHHH-HHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGG-------------
T ss_pred             CHHHHHHHHCCC--HHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCC-------------
T ss_conf             976999998689--99999-99980998665659999989999998699654413544301233322-------------


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCH
Q ss_conf             877421058950259999886239893789999999999975699999999949999--972369999389999991997
Q 002539          649 KISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG--PCVLDHCGQGVLHFAAALGYD  726 (911)
Q Consensus       649 ~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gad--in~~D~~G~TpLHlAA~~G~~  726 (911)
                            ..+..++++++.+...+...                    +++.+...+..  ....+..+.++|+.++..++.
T Consensus        65 ------~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (229)
T d1ixva_          65 ------YPDDSGWTPFHIACSVGNLE--------------------VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF  118 (229)
T ss_dssp             ------CCCTTSCCHHHHHHHHTCHH--------------------HHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             ------CCCCCCCCCCCCCCCCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             ------23222222222111123323--------------------3333222222222222322334433221232003


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             6887587649974324799971889999819999999999839-999998899999999999999999739499999999
Q 002539          727 WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA  805 (911)
Q Consensus       727 ~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~G-AdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LL  805 (911)
                      ++++.|+..|.+++.+|..|+||||+|+..|+.++++.|++.| .+++.      +|..|.||||+|+..|+.+++++|+
T Consensus       119 ~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~------~d~~g~TpLh~A~~~~~~~~v~~Ll  192 (229)
T d1ixva_         119 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGHGDAAVLLV  192 (229)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC------CCCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf             4322221100232124788997350232124533233332222222223------5666678102210125199999999


Q ss_pred             HC-CCCCCCCCCCCCCCCCCCHH-H-HCHHHHHHHHHCCCC
Q ss_conf             82-99786435754588899076-3-118999976625999
Q 002539          806 ES-DLSSALSAISLNKKDGDVAE-V-TGATAVQTVPQRCPT  843 (911)
Q Consensus       806 E~-gl~sh~adlnlkd~~G~ta~-~-~~~~vV~~Lle~gA~  843 (911)
                      ++ |     ++++++|..|.+|. + ...++++.|+++|++
T Consensus       193 ~~~g-----ad~~~~d~~g~t~l~~A~~~~~~~~Ll~~g~d  228 (229)
T d1ixva_         193 EKYG-----AEYDLVDNKGAKAEDVALNEQVKKFFLNNVVD  228 (229)
T ss_dssp             HHHC-----CCSCCCCTTSCCTGGGCSCHHHHHHHHHHCCC
T ss_pred             HHCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             9659-----99888589999999998467899999976999

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.94  E-value=3.8e-26  Score=187.34  Aligned_cols=242  Identities=17%  Similarity=0.121  Sum_probs=172.3

Q ss_pred             HHHHHHHH-CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH------HHHHHCCCCCCCCCCCCCH
Q ss_conf             49899997-3991899999988999888889889973889999719986127889------9887199996545799990
Q 002539          540 ENCKWSCM-FGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREF------EYRASHIPDVDVADNCGDI  612 (911)
Q Consensus       540 T~LHlAc~-fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~f------eyLl~~gadin~~D~~G~T  612 (911)
                      ||||+++. -|..++++.|.+.+++..  .. ..|+||||+||.+|+  .+++.+      .+++..|+++|.+|..|.|
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~--~~-~~g~T~Lh~A~~~g~--~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~T   76 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNII--DP-RHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDENT   76 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTC--CC-SSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCC--CC-CCCCCHHHHHHHCCC--HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCE
T ss_conf             869999981798889999986699867--79-999669999998689--9999999965236798769976454788885


Q ss_pred             HHHH----HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             7773----3799999981-2899999989999224567889877421058950259999886239893789999999999
Q 002539          613 TSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL  687 (911)
Q Consensus       613 aL~~----~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~al  687 (911)
                      |||+    ++.+++++|+ .|++++..+                      ..+.++++.+...+...             
T Consensus        77 pLh~A~~~g~~~iv~~Ll~~Gad~n~~~----------------------~~g~t~l~~a~~~~~~~-------------  121 (277)
T d2fo1e1          77 PLMLAVLARRRRLVAYLMKAGADPTIYN----------------------KSERSALHQAAANRDFG-------------  121 (277)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCC----------------------TTCCCHHHHHHHTTCHH-------------
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCC----------------------CCCCCCCCCHHHHCCHH-------------
T ss_conf             1003433333333333322322233222----------------------22222221001100001-------------


Q ss_pred             HHHHHHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHCCCHH---HHHHHHHC--------CCCCCCCCCCCCCHHHHH
Q ss_conf             975699999999949---9999723699993899999919976---88758764--------997432479997188999
Q 002539          688 KEKLQVWLVQKAAEG---GKGPCVLDHCGQGVLHFAAALGYDW---ALEPTTVA--------GVNINFRDVNGWTALHWA  753 (911)
Q Consensus       688 k~~l~~~Lv~lLle~---Gadin~~D~~G~TpLHlAA~~G~~~---iVklLLe~--------GadIN~rD~~G~TPLH~A  753 (911)
                             ++..+...   ...++..+..+.++.+++...+...   .+..+...        ....+..+..|+||||++
T Consensus       122 -------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~  194 (277)
T d2fo1e1         122 -------MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA  194 (277)
T ss_dssp             -------HHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHH
T ss_pred             -------HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -------2344431145422222222211036788875034332222210011233222222345554466898700001


Q ss_pred             HHCCCHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-----H
Q ss_conf             9819999999999-839999998899999999999999999739499999999829978643575458889907-----6
Q 002539          754 AYCGRERTVASLI-ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----E  827 (911)
Q Consensus       754 A~~G~~eiVklLL-~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-----~  827 (911)
                      +..++.++++.++ ..+.+.+.      +|..|+||||+|+..|+.+++++|++.|     ++++.+|..|.+|     .
T Consensus       195 ~~~~~~~~~~~~l~~~~~~~~~------~d~~g~tpL~~A~~~g~~~iv~~Ll~~g-----adin~~d~~G~T~L~~A~~  263 (277)
T d2fo1e1         195 AQVSNMPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDATDHTARQLAQA  263 (277)
T ss_dssp             HSSCCHHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSSSCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHH
T ss_conf             2233322222322234543334------6899998999999859899999999876-----9998869999999999998


Q ss_pred             HHCHHHHHHHHH
Q ss_conf             311899997662
Q 002539          828 VTGATAVQTVPQ  839 (911)
Q Consensus       828 ~~~~~vV~~Lle  839 (911)
                      .+..++|+.|++
T Consensus       264 ~~~~~iv~lL~~  275 (277)
T d2fo1e1         264 NNHHNIVDIFDR  275 (277)
T ss_dssp             TTCHHHHHHHHT
T ss_pred             CCCHHHHHHHHH
T ss_conf             598999999997

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-23  Score=169.16  Aligned_cols=243  Identities=18%  Similarity=0.109  Sum_probs=175.3

Q ss_pred             CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC-CCCCHHHHH----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             97388999971998612788998871999965457-999907773----3799999981289999998999922456788
Q 002539          573 GRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD-NCGDITSEN----LRMQFGKLLCLTSVSTPNYDPSNLSDISQLN  647 (911)
Q Consensus       573 G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D-~~G~TaL~~----~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~  647 (911)
                      +.|+|+.|+.+|+  .+++  ++|+..|++++.++ ..|.|||++    ++.+++++|......................
T Consensus         5 ~~~~L~~Ai~~~~--~e~v--k~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~   80 (285)
T d1wdya_           5 DNHLLIKAVQNED--VDLV--QQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAA   80 (285)
T ss_dssp             HHHHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             CCHHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             8489999998299--9999--99998798968248999979999999859998865520234322222211111467776


Q ss_pred             ------------HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-------
Q ss_conf             ------------9877421058950259999886239893789999999999975699999999949999972-------
Q 002539          648 ------------SKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCV-------  708 (911)
Q Consensus       648 ------------~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~-------  708 (911)
                                  .........+..+.+.+..++..+..                    .++..++....+++.       
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~  140 (285)
T d1wdya_          81 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--------------------KALKFLYKRGANVNLRRKTKED  140 (285)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH--------------------HHHHHHHHTTCCTTCCCCCCHH
T ss_pred             HCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCH--------------------HHHHHHHHHCCCCCCCCCCHHH
T ss_conf             43875322113431022101356898636788874001--------------------2544544310011323210122


Q ss_pred             ---CCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHC----CCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             ---369999389999991997688758764-997432479997188999981----999999999983999999889999
Q 002539          709 ---LDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYC----GRERTVASLIALGAAPGALSDPTP  780 (911)
Q Consensus       709 ---~D~~G~TpLHlAA~~G~~~iVklLLe~-GadIN~rD~~G~TPLH~AA~~----G~~eiVklLL~~GAdinavtDpt~  780 (911)
                         .+..|.||||+|+..|+.+++++||+. |++++.++..|.++++.+...    +...+++.|+++|++++.      
T Consensus       141 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~------  214 (285)
T d1wdya_         141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV------  214 (285)
T ss_dssp             HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC------
T ss_pred             HHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC------
T ss_conf             22201468569999998689999999984569894554678983322332234301799999999977999886------


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-----HHHCHHHHHHHHHCCCCCCCCCC
Q ss_conf             9999999999999739499999999829978643575458889907-----63118999976625999999999
Q 002539          781 KYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPTPVSDGD  849 (911)
Q Consensus       781 ~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-----~~~~~~vV~~Lle~gA~~~~~~~  849 (911)
                      ++..|.||||+|+..|+.+++++|++..    +++++.+|.+|.||     ..+..++|+.|++.||++++.+.
T Consensus       215 ~~~~g~t~L~~a~~~~~~~~v~~lL~~~----g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         215 RGERGKTPLILAVEKKHLGLVQRLLEQE----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHSS----SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCCCCCCCCCHHHHCCCHHHHHHHHHCC----CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
T ss_conf             6899998241122138699999999808----999868799998999999985979999999987989986017

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-23  Score=170.11  Aligned_cols=153  Identities=24%  Similarity=0.268  Sum_probs=124.8

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             49899997399189999998899988888988997388999971998612788998871999965457999907773379
Q 002539          540 ENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRM  619 (911)
Q Consensus       540 T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~~~~  619 (911)
                      ++||+||..|++++++.||+.|++++  ..+..|+||||+|+ .++  .+++  ++                        
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n--~~d~~g~TpL~~A~-~~~--~ei~--~~------------------------   51 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMK-LGN--PEIA--RR------------------------   51 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTT--CCCTTSCCHHHHCC-SSC--HHHH--HH------------------------
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCCCCCCC-CCC--CCCC--CC------------------------
T ss_conf             89999998679999999998787967--46774453212222-222--2222--22------------------------


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999812899999989999224567889877421058950259999886239893789999999999975699999999
Q 002539          620 QFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKA  699 (911)
Q Consensus       620 ~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lL  699 (911)
                                                                                                     |
T Consensus        52 -------------------------------------------------------------------------------L   52 (156)
T d1ihba_          52 -------------------------------------------------------------------------------L   52 (156)
T ss_dssp             -------------------------------------------------------------------------------H
T ss_pred             -------------------------------------------------------------------------------C
T ss_conf             -------------------------------------------------------------------------------2


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCC
Q ss_conf             94999997236999938999999199768875876499743247999718899998199999999998399-99998899
Q 002539          700 AEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGA-APGALSDP  778 (911)
Q Consensus       700 le~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GA-dinavtDp  778 (911)
                      ++.|++++.++..|.++|+.++..++.+.++.|+..+.+++..|..|.+|||+|+..|+.+++++|+++|+ +++.    
T Consensus        53 l~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~----  128 (156)
T d1ihba_          53 LLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH----  128 (156)
T ss_dssp             HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC----
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----
T ss_conf             2222222121235753222332222222222221122222235644321122333322122222222122011224----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             999999999999999739499999999829
Q 002539          779 TPKYPSGRTPADLASSIGHKGIAGYLAESD  808 (911)
Q Consensus       779 t~~D~~G~TPLhlAa~~Gh~eIvk~LLE~g  808 (911)
                        +|..|.||||+|++.|+.+++++|+++|
T Consensus       129 --~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         129 --RNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             --CCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             --CCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             --5899989999999839899999999667

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=7.1e-23  Score=165.74  Aligned_cols=150  Identities=21%  Similarity=0.203  Sum_probs=121.6

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             44989999739918999999889998888898899738899997199861278899887199996545799990777337
Q 002539          539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR  618 (911)
Q Consensus       539 ~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~~~  618 (911)
                      .|||+.||+.|+.++++.||+.|++.+   .+..|+||||+|+..++  .+++  .++.....                 
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~---~~~~g~t~L~~a~~~~~--~~~~--~~~~~~~~-----------------   58 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGH--FSTT--EVLLRAGV-----------------   58 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTC--HHHH--HHHHTTTC-----------------
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCC--CCCC--CCCCCCCC-----------------
T ss_conf             979999998789999999998699834---24478753334323222--2222--22222222-----------------


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999981289999998999922456788987742105895025999988623989378999999999997569999999
Q 002539          619 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK  698 (911)
Q Consensus       619 ~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~l  698 (911)
                                                                                                      
T Consensus        59 --------------------------------------------------------------------------------   58 (153)
T d1awcb_          59 --------------------------------------------------------------------------------   58 (153)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99499999723699993899999919976887587649974324799971889999819999999999839999998899
Q 002539          699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDP  778 (911)
Q Consensus       699 Lle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDp  778 (911)
                            .....+..+.++++.++...+...+++++..|++++.+|.+|+||||+||..|+.++|++|+++|++++.    
T Consensus        59 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~----  128 (153)
T d1awcb_          59 ------SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT----  128 (153)
T ss_dssp             ------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred             ------CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCCCCC----
T ss_conf             ------2221222233323222233110122122246876123224673477766430222412311434467726----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             99999999999999973949999999
Q 002539          779 TPKYPSGRTPADLASSIGHKGIAGYL  804 (911)
Q Consensus       779 t~~D~~G~TPLhlAa~~Gh~eIvk~L  804 (911)
                        +|..|.||||+|+.+|+.+|+++|
T Consensus       129 --~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         129 --QSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             --CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             --CCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             --689899999999985999999867

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.6e-23  Score=167.00  Aligned_cols=151  Identities=20%  Similarity=0.227  Sum_probs=121.4

Q ss_pred             HHHHHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             498999973991899999988-9998888898899738899997199861278899887199996545799990777337
Q 002539          540 ENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR  618 (911)
Q Consensus       540 T~LHlAc~fG~~eVv~~LLe~-Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~~~  618 (911)
                      ..|+.||+.|++++|++||+. +++++  ..+..|+||||+|+.++   .+++  ++|                      
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n--~~d~~g~t~L~~A~~~~---~~~v--~~L----------------------   54 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPD--ALNRFGKTALQVMMFGS---TAIA--LEL----------------------   54 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTT--CCCTTSCCHHHHSCTTC---HHHH--HHH----------------------
T ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCC---CCCC--CCC----------------------
T ss_conf             799999995899999999995899988--64899984133432222---2222--222----------------------


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999981289999998999922456788987742105895025999988623989378999999999997569999999
Q 002539          619 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK  698 (911)
Q Consensus       619 ~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~l  698 (911)
                                                                                                      
T Consensus        55 --------------------------------------------------------------------------------   54 (156)
T d1bd8a_          55 --------------------------------------------------------------------------------   54 (156)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99499999723699993899999919976887587649974324799971889999819999999999839999998899
Q 002539          699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDP  778 (911)
Q Consensus       699 Lle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDp  778 (911)
                       ++.+.+++..+..|.+||++++..++.++++.+++.|+++|.+|..|+||||+||..|+.+++++|+ .|++++.    
T Consensus        55 -l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~----  128 (156)
T d1bd8a_          55 -LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHR----  128 (156)
T ss_dssp             -HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTC----
T ss_pred             -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC----
T ss_conf             -2222222222222222222222222222222222221221123677872221222233222211112-2256646----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             99999999999999973949999999982
Q 002539          779 TPKYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       779 t~~D~~G~TPLhlAa~~Gh~eIvk~LLE~  807 (911)
                        +|..|.||||+|+..|+.+|+++|+++
T Consensus       129 --~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         129 --RDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             --CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             --CCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             --689999999999985989999999966

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-23  Score=169.12  Aligned_cols=190  Identities=17%  Similarity=0.156  Sum_probs=154.1

Q ss_pred             CCCHHHHHHHHCCCCCCHHHH--HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             997388999971998612788--998871999965457999907773379999998128999999899992245678898
Q 002539          572 VGRVPFYVTCSNRLSCSEVRE--FEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSK  649 (911)
Q Consensus       572 ~G~TPLhiAa~ng~a~seVv~--feyLl~~gadin~~D~~G~TaL~~~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~  649 (911)
                      +|.||||+|+.+|.  .+++.  ++++...++++|.+|..|.||||+                                 
T Consensus         1 dG~t~Lh~A~~~g~--~~~~~~li~~~~~~~~~in~~d~~g~TpLh~---------------------------------   45 (221)
T d1iknd_           1 DGDSFLHLAIIHEE--KALTMEVIRQVKGDLAFLNFQNNLQQTPLHL---------------------------------   45 (221)
T ss_dssp             CCCCTTHHHHHTTC--SSSSSCCCC-----CCCCCCCCTTCCCHHHH---------------------------------
T ss_pred             CCCHHHHHHHHCCC--HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---------------------------------
T ss_conf             98729999998589--9999999999986799753678999954634---------------------------------


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             77421058950259999886239893789999999999975699999999949999972369999389999991997688
Q 002539          650 ISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWAL  729 (911)
Q Consensus       650 i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iV  729 (911)
                                       ++..+..                    .+++.|++.|++++.+|..|.||||+++..|+.+++
T Consensus        46 -----------------A~~~~~~--------------------~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~   88 (221)
T d1iknd_          46 -----------------AVITNQP--------------------EIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASV   88 (221)
T ss_dssp             -----------------HHHTTCH--------------------HHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHH
T ss_pred             -----------------CCCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -----------------3343322--------------------233332222222222322322222223332222211


Q ss_pred             HHHHHCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf             758764997------43247999718899998199999999998399999988999999999999999997394999999
Q 002539          730 EPTTVAGVN------INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGY  803 (911)
Q Consensus       730 klLLe~Gad------IN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~  803 (911)
                      +.|+..+..      .+.....|.||||+|+..|+.+++++|+..|+.++..     .+..|.||||+|+..|+.+++++
T Consensus        89 ~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~-----~~~~G~T~L~~A~~~g~~~~v~~  163 (221)
T d1iknd_          89 GVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ-----EPCNGRTALHLAVDLQNPDLVSL  163 (221)
T ss_dssp             HHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTTCCCHHHHHHHTTCHHHHHH
T ss_pred             CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCC-----CCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             1011101323332222222334321356775559822301001368631122-----44677784311112224898888


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCH-----HHHCHHHHHHHHHCCCC
Q ss_conf             99829978643575458889907-----63118999976625999
Q 002539          804 LAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRCPT  843 (911)
Q Consensus       804 LLE~gl~sh~adlnlkd~~G~ta-----~~~~~~vV~~Lle~gA~  843 (911)
                      |++.|     +|++.++..|.||     ..+..++++.|.+....
T Consensus       164 Ll~~g-----ad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         164 LLKCG-----ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHTTT-----CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHCC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             98638-----86456699998999999987889999999982873

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=2.1e-22  Score=162.62  Aligned_cols=184  Identities=13%  Similarity=0.009  Sum_probs=137.8

Q ss_pred             CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             86654498999973991899999988999888889889973889999719986127889988719999654579999077
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS  614 (911)
Q Consensus       535 ~~~~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL  614 (911)
                      +..+.|||||||..|+.+++++||+.|+.++  ..+..+.+++++++..+.  .....+ ...............+.+..
T Consensus        20 d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n--~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~   94 (209)
T d1ot8a_          20 DKTGETSLHLAARFARADAAKRLLDAGADAN--SQDNTGRTPLHAAVAADA--MGVFQI-LLRNRATNLNARMHDGTTPL   94 (209)
T ss_dssp             HHHCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC--HHHHHH-HHTCTTCCTTCCCTTCCCHH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCC--CCCCCC-CCCCCCCCCCCCCCCCCCCC
T ss_conf             9999889999998399999999875022332--222222222222222222--222222-22222222322222233322


Q ss_pred             HH----HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             73----3799999981-289999998999922456788987742105895025999988623989378999999999997
Q 002539          615 EN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE  689 (911)
Q Consensus       615 ~~----~~~~ivkLLl-~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~  689 (911)
                      +.    ....+.++|. .+.++...                      +..++++++.++..+...               
T Consensus        95 ~~~~~~~~~~~~~~L~~~~~~~~~~----------------------~~~~~t~l~~~~~~~~~~---------------  137 (209)
T d1ot8a_          95 ILAARLAIEGMVEDLITADADINAA----------------------DNSGKTALHWAAAVNNTE---------------  137 (209)
T ss_dssp             HHHHHTTCTTHHHHHHHTTCCTTCB----------------------CTTSCBHHHHHHHTTCHH---------------
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCC----------------------CCCCCCCCHHHCCCCCCE---------------
T ss_conf             2222221012355553101465555----------------------779998230000368631---------------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             5699999999949999972369999389999991997688758764997432479997188999981999999999
Q 002539          690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL  765 (911)
Q Consensus       690 ~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklL  765 (911)
                           +++.+++.+.+++.+|..|.||||+||..|+.++|++||++|++++.+|..|+||||+|+.+|+.++|++|
T Consensus       138 -----~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         138 -----AVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             -----HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             -----EEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             -----45320122223454434445521121032499999999987999988689999999999986879899643

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.9e-24  Score=172.89  Aligned_cols=192  Identities=17%  Similarity=0.121  Sum_probs=123.3

Q ss_pred             CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH-CCCCCCCCCCCCCHH
Q ss_conf             8665449899997399189999998899988888988997388999971998612788998871-999965457999907
Q 002539          535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRAS-HIPDVDVADNCGDIT  613 (911)
Q Consensus       535 ~~~~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~-~gadin~~D~~G~Ta  613 (911)
                      +..+.|||||||..|+.++|+.||+.|++++  ..+..|+||||.||..++ +.+...|+.++. ....++..|..|+|+
T Consensus       104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~--~~d~~G~TpL~~A~~~~~-~~~~~~~~~ll~~l~~~~~~~d~~g~t~  180 (301)
T d1sw6a_         104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRL--YGDNMGESCLVKAVKSVN-NYDSGTFEALLDYLYPCLILEDSMNRTI  180 (301)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--BCCTTCCCHHHHHHHSSH-HHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             8999888999998679999999998789977--677643517777422022-0246669999999764555134532778


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             77337999999812899999989999224567889877421058950259999886239893789999999999975699
Q 002539          614 SENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV  693 (911)
Q Consensus       614 L~~~~~~ivkLLl~ga~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~  693 (911)
                      +|+..                                                  ............       +.. .+
T Consensus       181 lh~~~--------------------------------------------------~~~~~~~~~~~~-------~~~-~~  202 (301)
T d1sw6a_         181 LHHII--------------------------------------------------ITSGMTGCSAAA-------KYY-LD  202 (301)
T ss_dssp             HHHHH--------------------------------------------------HHHTSTTCHHHH-------HHH-HH
T ss_pred             HHHHH--------------------------------------------------HHHCCCCCHHHH-------HHH-HH
T ss_conf             79999--------------------------------------------------983755418999-------998-99


Q ss_pred             HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHH-HH--CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             999999949999-972369999389999991997688758-76--49974324799971889999819999999999839
Q 002539          694 WLVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPT-TV--AGVNINFRDVNGWTALHWAAYCGRERTVASLIALG  769 (911)
Q Consensus       694 ~Lv~lLle~Gad-in~~D~~G~TpLHlAA~~G~~~iVklL-Le--~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~G  769 (911)
                      .++.++...+.. .......+.++++.+........+..+ +.  .+..+|.+|.+|+||||+||+.|+.++|++||++|
T Consensus       203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~G  282 (301)
T d1sw6a_         203 ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG  282 (301)
T ss_dssp             HHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred             HHHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             99999986587200002456640468988601488999986677886076687899988999999868799999999879


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             999998899999999999999999
Q 002539          770 AAPGALSDPTPKYPSGRTPADLAS  793 (911)
Q Consensus       770 AdinavtDpt~~D~~G~TPLhlAa  793 (911)
                      |++++      +|..|+|||++|+
T Consensus       283 Ad~~~------~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         283 ADPFI------ANKSGLRPVDFGA  300 (301)
T ss_dssp             CCTTC------CCTTSCCGGGGTC
T ss_pred             CCCCC------CCCCCCCHHHHCC
T ss_conf             99999------8999999999737

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.90  E-value=4.7e-26  Score=186.79  Aligned_cols=227  Identities=7%  Similarity=-0.023  Sum_probs=159.7

Q ss_pred             CCCCCHHHHHHHHCCCCHHHHH---HHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC--CC
Q ss_conf             8665449899997399189999---998899988888988997388999971998612788998871999965457--99
Q 002539          535 SQQEAENCKWSCMFGEIEVPAE---IVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD--NC  609 (911)
Q Consensus       535 ~~~~~T~LHlAc~fG~~eVv~~---LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D--~~  609 (911)
                      +..+.|+|++||..|+.++++.   |++.|++++  ..+..|+||||+||.+||  .+++  ++|+..|++++..+  ..
T Consensus        87 ~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in--~~~~~g~taL~~Aa~~G~--~~~v--~~Ll~~g~~~~~~~~~~~  160 (346)
T d2ajaa1          87 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVK--VIQAENYQAFRLAAENGH--LHVL--NRLCELAPTEIMAMIQAE  160 (346)
T ss_dssp             TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC----CHHHHHHHHHHHHTTC--HHHH--HHHHHSCTTTHHHHHSHH
T ss_pred             CCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCC
T ss_conf             6788849999998599889999999983898553--368999979999998789--9999--999986997021455569


Q ss_pred             CCHHHHH----HHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             9907773----3799999981289-9999989999224567889877421058950259999886239893789999999
Q 002539          610 GDITSEN----LRMQFGKLLCLTS-VSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ  684 (911)
Q Consensus       610 G~TaL~~----~~~~ivkLLl~ga-~~~~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~  684 (911)
                      |.||||.    ++.+++++|+... ....              .     ...+.++.++++.++..++.+          
T Consensus       161 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~--------------~-----~~~~~~~~t~l~~A~~~g~~~----------  211 (346)
T d2ajaa1         161 NYHAFRLAAENGHLHVLNRLCELAPTEAT--------------A-----MIQAENYYAFRWAAVGRGHHN----------  211 (346)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHSCGGGHH--------------H-----HHHHHHHHHHHHHHSTTCCHH----------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCCC--------------C-----CCCCCCCCCHHHHHHHCCHHH----------
T ss_conf             98743899887567999999976994201--------------2-----001689963115776248899----------


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCC-------CCCCCCHHHHHHHCCCHHHHHHHHHCCCC--CCCCC-------CCCCC
Q ss_conf             9999756999999999499999723-------69999389999991997688758764997--43247-------99971
Q 002539          685 KLLKEKLQVWLVQKAAEGGKGPCVL-------DHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRD-------VNGWT  748 (911)
Q Consensus       685 ~alk~~l~~~Lv~lLle~Gadin~~-------D~~G~TpLHlAA~~G~~~iVklLLe~Gad--IN~rD-------~~G~T  748 (911)
                                +++.|++.|++++..       ...+.++++.+...+..+....++....+  .+..+       ..+.+
T Consensus       212 ----------iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~  281 (346)
T d2ajaa1         212 ----------VINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLR  281 (346)
T ss_dssp             ----------HHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHH
T ss_conf             ----------9999996899866377999875947666889976304437899999736265676773333235624422


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             88999981999999999983999999889999999999999999973949999999982
Q 002539          749 ALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES  807 (911)
Q Consensus       749 PLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~  807 (911)
                      +|+.|+..|+.++|++|++.++...... ....+..|.||||+|++.||.+++++|++.
T Consensus       282 ~l~~a~~~~~ld~v~~Ll~~~~~~~~~~-~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         282 NLIRRNDEVLLDDIRFLLSIPGIKALAP-TATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             HHHHHCCGGGHHHHHHHHTSTTTGGGSS-CCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             HHHHHHCCCHHHHHHHHHHCCCHHHHCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHCC
T ss_conf             9999861795999999986867555364-456799998199999984819999998589

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.8e-20  Score=149.79  Aligned_cols=206  Identities=17%  Similarity=0.071  Sum_probs=155.1

Q ss_pred             CCCCHHHHHHHHCCCCCCHHHHH--HHHHHCCCCCCCCCCCCCHHHHH----HHHHHHHHHH-CCCCCCCCCCCCCCHHH
Q ss_conf             89973889999719986127889--98871999965457999907773----3799999981-28999999899992245
Q 002539          571 KVGRVPFYVTCSNRLSCSEVREF--EYRASHIPDVDVADNCGDITSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDI  643 (911)
Q Consensus       571 ~~G~TPLhiAa~ng~a~seVv~f--eyLl~~gadin~~D~~G~TaL~~----~~~~ivkLLl-~ga~~~~~~~~~~~~e~  643 (911)
                      .+|.||||+||..|+  .+++.+  +++...|++++.+|..|.|||+.    ++.+++++|+ .+++.+...        
T Consensus         1 ~dG~TpLh~A~~~g~--~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~--------   70 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGN--LPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD--------   70 (228)
T ss_dssp             CTTCCHHHHHHHTTC--HHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------
T ss_pred             CCCCCHHHHHHHCCC--HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCC--------
T ss_conf             988429999998399--9999999998997799777668999962410001355333333322222334333--------


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             67889877421058950259999886239893789999999999975699999999949999972369999389999991
Q 002539          644 SQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL  723 (911)
Q Consensus       644 ~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~  723 (911)
                                    ..+..++..+........                ...............+.......++||.+...
T Consensus        71 --------------~~~~~~~~~a~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  120 (228)
T d1k1aa_          71 --------------RHGQTAAHLACEHRSPTC----------------LRALLDSAAPGTLDLEARNYDGLTALHVAVNT  120 (228)
T ss_dssp             --------------TTSCCHHHHHHHTTCHHH----------------HHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHH
T ss_pred             --------------CCCCCCCCCCCCCCCCCC----------------HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             --------------322233322222345210----------------02344204543223223333222222222222


Q ss_pred             CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             99768875876499743-24799971889999819999999999839999998899999999999999999739499999
Q 002539          724 GYDWALEPTTVAGVNIN-FRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAG  802 (911)
Q Consensus       724 G~~~iVklLLe~GadIN-~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk  802 (911)
                      ......+.|.....+.. ..+..|++|||+|+..+...+++.+++.|.+++.      +|..|.||||+|+.+|+.++++
T Consensus       121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~------~d~~g~t~L~~A~~~g~~~~v~  194 (228)
T d1k1aa_         121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA------QMYSGSSALHSASGRGLLPLVR  194 (228)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHH
T ss_pred             CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             2100134430012332222100025578898875100234432220223222------1236861689999858799999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9998299786435754588899076
Q 002539          803 YLAESDLSSALSAISLNKKDGDVAE  827 (911)
Q Consensus       803 ~LLE~gl~sh~adlnlkd~~G~ta~  827 (911)
                      +|+++|     ++++.+|..|.||.
T Consensus       195 ~Ll~~G-----ad~n~~d~~G~TpL  214 (228)
T d1k1aa_         195 TLVRSG-----ADSSLKNCHNDTPL  214 (228)
T ss_dssp             HHHHTT-----CCTTCCCTTSCCTT
T ss_pred             HHHHCC-----CCCCCCCCCCCCHH
T ss_conf             999878-----99988789999999

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=9.6e-21  Score=151.67  Aligned_cols=108  Identities=19%  Similarity=0.175  Sum_probs=97.0

Q ss_pred             HHHHHHCCCCCCCC------CCCCCCHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             99999499999723------69999389999991---9976887587649974324799971889999819999999999
Q 002539          696 VQKAAEGGKGPCVL------DHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLI  766 (911)
Q Consensus       696 v~lLle~Gadin~~------D~~G~TpLHlAA~~---G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL  766 (911)
                      +..++..|++++..      +..|+||||+|+..   |..++|++||++|+++|.+|..|+||||+||..|+.++|++||
T Consensus        22 l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll  101 (154)
T d1dcqa1          22 LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL  101 (154)
T ss_dssp             HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999869986777775457899982699999832899899999999749973331312101000111123333221221


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             8399999988999999999999999997394999999998299
Q 002539          767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       767 ~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl  809 (911)
                      ++||+++.      +|..|+||||+|+..|+.+++++|++.+.
T Consensus       102 ~~gad~~~------~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1         102 RGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             CCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             35755024------47899999999999399999999999388

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.86  E-value=1.4e-23  Score=170.33  Aligned_cols=134  Identities=12%  Similarity=0.012  Sum_probs=104.4

Q ss_pred             CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             58950259999886239893789999999999975699999999949999972369999389999991997688758764
Q 002539          656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA  735 (911)
Q Consensus       656 ~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~  735 (911)
                      .+..+.++|+.++..|+.+.                 .-+++.|+..|++++.+|..|.||||+||..|+.++|++|++.
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~-----------------~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~  148 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSA-----------------LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL  148 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHH-----------------HHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHCCHHH-----------------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
T ss_conf             36788849999998599889-----------------9999999838985533689999799999987899999999986


Q ss_pred             CCCCCCCCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             997432479--99718899998199999999998399999988999999999999999997394999999998299
Q 002539          736 GVNINFRDV--NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL  809 (911)
Q Consensus       736 GadIN~rD~--~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl  809 (911)
                      |++++.++.  .|+||||+||.+|+.++|++|++.|++....   +..+..|.||++.|+.+||.+++++|++.|+
T Consensus       149 g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~---~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga  221 (346)
T d2ajaa1         149 APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATA---MIQAENYYAFRWAAVGRGHHNVINFLLDCPV  221 (346)
T ss_dssp             CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHH---HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC
T ss_conf             997021455569987438998875679999999769942012---0016899631157762488999999996899

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-21  Score=156.60  Aligned_cols=109  Identities=30%  Similarity=0.372  Sum_probs=95.9

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999949999972369999389999991997688758764997432479997188999981999999999983999999
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdina  774 (911)
                      +++.|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++|.+|.+|+||||+||.+|+.++|++|+++||+++.
T Consensus        16 ~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~   95 (130)
T d1ycsb1          16 LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA   95 (130)
T ss_dssp             HHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             99999986997561002111111222222222222222222222222123676422232102688999999986998664


Q ss_pred             CCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHCC
Q ss_conf             889999999999999999--9739499999999829
Q 002539          775 LSDPTPKYPSGRTPADLA--SSIGHKGIAGYLAESD  808 (911)
Q Consensus       775 vtDpt~~D~~G~TPLhlA--a~~Gh~eIvk~LLE~g  808 (911)
                      .+     +..|.||++++  +.+||.+++++|++..
T Consensus        96 ~~-----~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          96 MT-----YSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             CC-----SSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             CC-----CCCCCCHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             66-----89998899999999868299999998678

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-21  Score=157.65  Aligned_cols=105  Identities=28%  Similarity=0.345  Sum_probs=98.9

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             99999949999972369999389999991997688758764997432479997-18899998199999999998399999
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       695 Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~-TPLH~AA~~G~~eiVklLL~~GAdin  773 (911)
                      +++.|++.|++++.++..|.|+||+|+ .|+.+++++|+++|+++|.+|..|+ ||||+||..|+.++|++|+++|++++
T Consensus        18 ~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~   96 (125)
T d1bi7b_          18 EVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD   96 (125)
T ss_dssp             HHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999859741332221222222222-2222222212222222222222222222222223222222222212222233


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             988999999999999999997394999999998
Q 002539          774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE  806 (911)
Q Consensus       774 avtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE  806 (911)
                      .      +|..|+||||+|+.+|+.+++++|+.
T Consensus        97 ~------~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          97 V------RDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             C------CCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             C------CCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             2------45789899999998687999999995

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.5e-20  Score=147.96  Aligned_cols=136  Identities=20%  Similarity=0.262  Sum_probs=126.6

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999949999972369999389999991997688758764997432479997188999981999999999983999999
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdina  774 (911)
                      +++.|++.|++++.+|..|.||||+|+ .|+.+++++|+++|++++.++..|.++|++++..++.++++.|+..+.+++.
T Consensus        16 ~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~   94 (156)
T d1ihba_          16 QLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI   94 (156)
T ss_dssp             HHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999878796746774453212222-2222222222222222212123575322233222222222222112222223


Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-----HHHCHHHHHHHHHCC
Q ss_conf             8899999999999999999739499999999829978643575458889907-----631189999766259
Q 002539          775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQRC  841 (911)
Q Consensus       775 vtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-----~~~~~~vV~~Lle~g  841 (911)
                            .+..|.+|+|+|+..++.+++++|++++.    .+.+.++..|.||     ..+..++++.|+++|
T Consensus        95 ------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          95 ------EDNEGNLPLHLAAKEGHLRVVEFLVKHTA----SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             ------CCTTSCCHHHHHHHTTCHHHHHHHHHHSC----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ------CCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             ------56443211223333221222222221220----112245899989999999839899999999667

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.4e-20  Score=150.63  Aligned_cols=194  Identities=12%  Similarity=-0.012  Sum_probs=130.3

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99999988999888889889973889999719986127889988719999654579999077733799999981289999
Q 002539          553 VPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVST  632 (911)
Q Consensus       553 Vv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng~a~seVv~feyLl~~gadin~~D~~G~TaL~~~~~~ivkLLl~ga~~~  632 (911)
                      +...+...+.+++. +.|..|+||||+||..|+  .+++  ++|+..|++++.+|..|.||||..-.       .+    
T Consensus        88 ~~~~~~~~~~dvn~-~~D~~G~T~LH~Aa~~g~--~~~v--~~Ll~~gad~~~~d~~G~TpL~~A~~-------~~----  151 (301)
T d1sw6a_          88 VNDAFPNTQLNLNI-PVDEHGNTPLHWLTSIAN--LELV--KHLVKHGSNRLYGDNMGESCLVKAVK-------SV----  151 (301)
T ss_dssp             HHHHCTTSCCCSCS-CCSTTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTBCCTTCCCHHHHHHH-------SS----
T ss_pred             HHHCCCCCCCCCCC-CCCCCCCCHHHHHHHCCC--HHHH--HHHHHCCCCCCCCCCCCCCHHHHHHH-------CC----
T ss_conf             98517766878686-868999888999998679--9999--99998789977677643517777422-------02----


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99899992245678898774210589502599998862398937899999999999756999999999499999723699
Q 002539          633 PNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC  712 (911)
Q Consensus       633 ~~~~~~~~~e~~~l~~~i~sl~~~d~~~~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~  712 (911)
                                                .    .   .                   ..+....+++++.   ..++.+|..
T Consensus       152 --------------------------~----~---~-------------------~~~~~~~ll~~l~---~~~~~~d~~  176 (301)
T d1sw6a_         152 --------------------------N----N---Y-------------------DSGTFEALLDYLY---PCLILEDSM  176 (301)
T ss_dssp             --------------------------H----H---H-------------------HTTCHHHHHHHHG---GGGGEECTT
T ss_pred             --------------------------C----C---H-------------------HHHHHHHHHHHHH---HHHHHCCCC
T ss_conf             --------------------------2----0---2-------------------4666999999976---455513453


Q ss_pred             CCCHHHHHHHCCCH------------HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHH-H--CCCCCCCCC
Q ss_conf             99389999991997------------688758764997-4324799971889999819999999999-8--399999988
Q 002539          713 GQGVLHFAAALGYD------------WALEPTTVAGVN-INFRDVNGWTALHWAAYCGRERTVASLI-A--LGAAPGALS  776 (911)
Q Consensus       713 G~TpLHlAA~~G~~------------~iVklLLe~Gad-IN~rD~~G~TPLH~AA~~G~~eiVklLL-~--~GAdinavt  776 (911)
                      |+||||.++..+..            .++.+++..+.. .......+.++++.+.......++..+. .  .+..+|.  
T Consensus       177 g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~--  254 (301)
T d1sw6a_         177 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA--  254 (301)
T ss_dssp             CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTC--
T ss_pred             CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC--
T ss_conf             277879999983755418999998999999998658720000245664046898860148899998667788607668--


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             9999999999999999973949999999982997864357545888990763
Q 002539          777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV  828 (911)
Q Consensus       777 Dpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta~~  828 (911)
                          +|..|+||||+|+++|+.+++++|++.|     ++++++|+.|.||.-
T Consensus       255 ----~D~~G~TpLh~A~~~g~~~iv~~Ll~~G-----Ad~~~~n~~G~Tpl~  297 (301)
T d1sw6a_         255 ----QDSNGDTCLNIAARLGNISIVDALLDYG-----ADPFIANKSGLRPVD  297 (301)
T ss_dssp             ----CCTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCTTCCCTTSCCGGG
T ss_pred             ----CCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHH
T ss_conf             ----7899988999999868799999999879-----999998999999999

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.6e-21  Score=156.86  Aligned_cols=113  Identities=24%  Similarity=0.236  Sum_probs=91.8

Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             93899999919976887587649974324799971889999819999999999839999998899999999999999999
Q 002539          714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS  793 (911)
Q Consensus       714 ~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa  793 (911)
                      .|||++|+..|+.++|++||++|+++|.+|..|+||||+||.+|+.+++++|++.|++++.      +|..|+||||+|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~------~d~~g~tpLh~A~   76 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPLLSAV   76 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC------CSSSCSCHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE------CCCCCCCCHHHHH
T ss_conf             7289999987799999999984201223222222222222222222222223343202331------0123321022332


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-HHHCHHHHHHH
Q ss_conf             739499999999829978643575458889907-63118999976
Q 002539          794 SIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTV  837 (911)
Q Consensus       794 ~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-~~~~~~vV~~L  837 (911)
                      .+|+.+++++|+++|     ++++.+|..|.+| ..+..+.++.|
T Consensus        77 ~~~~~~~v~~Ll~~G-----ad~~~~d~~G~t~l~~a~~~~i~~L  116 (118)
T d1myoa_          77 YEGHVSCVKLLLSKG-----ADKTVKGPDGLTALEATDNQAIKAL  116 (118)
T ss_dssp             TTTCCHHHHHHHTTC-----CCSSSSSSSTCCCCCTCSSTTTGGG
T ss_pred             HCCCHHHHHHHHCCC-----CCCEEECCCCCCHHHHHHHHHHHHH
T ss_conf             047324324331020-----0000038999999999868799873

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-19  Score=144.06  Aligned_cols=133  Identities=22%  Similarity=0.258  Sum_probs=119.6

Q ss_pred             HHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             999999-4999997236999938999999199768875876499743247999718899998199999999998399999
Q 002539          695 LVQKAA-EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG  773 (911)
Q Consensus       695 Lv~lLl-e~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdin  773 (911)
                      .++.|+ ..+++++.+|..|+||||+|+ .|+.++++.||+.+++++.++..|++||+.|+..++.++++.+++.|++++
T Consensus        17 ~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n   95 (156)
T d1bd8a_          17 EVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN   95 (156)
T ss_dssp             HHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999999589998864899984133432-222222222222222222222222222222222222222222222212211


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-----HHHCHHHHHHHHHC
Q ss_conf             98899999999999999999739499999999829978643575458889907-----63118999976625
Q 002539          774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVPQR  840 (911)
Q Consensus       774 avtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-----~~~~~~vV~~Lle~  840 (911)
                      .      +|..|+||||+|+..|+.+++++|+ .+     ++++.++..|.||     ..+..++++.|+++
T Consensus        96 ~------~~~~~~t~L~~A~~~~~~~i~~~L~-~~-----~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          96 V------PDGTGALPIHLAVQEGHTAVVSFLA-AE-----SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             C------CCTTSCCHHHHHHHHTCHHHHHHHH-TT-----SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             C------CCCCCCEEECCCCCCCCCCCCCCCC-CC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             2------3677872221222233222211112-22-----56646689999999999985989999999966

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.8e-20  Score=148.55  Aligned_cols=115  Identities=23%  Similarity=0.166  Sum_probs=100.8

Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             38999999199768875876499743247999718899998199999999998399999988999999999999999997
Q 002539          715 GVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASS  794 (911)
Q Consensus       715 TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~  794 (911)
                      ++||.||..|+.++|+.|+++|+|+|.+|.+|+||||+||..|+.+++++|+++|++++.      +|..|+||||+|+.
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~------~d~~g~tpLh~A~~   76 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAAS   76 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCH
T ss_conf             999999993999999999986997561002111111222222222222222222222222------12367642223210


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCH-------HHHCHHHHHHHHHC
Q ss_conf             394999999998299786435754588-89907-------63118999976625
Q 002539          795 IGHKGIAGYLAESDLSSALSAISLNKK-DGDVA-------EVTGATAVQTVPQR  840 (911)
Q Consensus       795 ~Gh~eIvk~LLE~gl~sh~adlnlkd~-~G~ta-------~~~~~~vV~~Lle~  840 (911)
                      +|+.+++++|+++|     ++++..+. .+.++       ..+..++++.|+..
T Consensus        77 ~g~~~~v~~Ll~~g-----a~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          77 CNNVQVCKFLVESG-----AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             TTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCC-----CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             26889999999869-----98664668999889999999986829999999867

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=8.8e-22  Score=158.52  Aligned_cols=114  Identities=25%  Similarity=0.209  Sum_probs=100.4

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             59999886239893789999999999975699999999949999972369999389999991997688758764997432
Q 002539          662 DLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF  741 (911)
Q Consensus       662 t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~  741 (911)
                      ++|+.|+..++..                    +++.|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++|.
T Consensus         4 tpL~~A~~~g~~~--------------------~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~   63 (118)
T d1myoa_           4 KEFMWALKNGDLD--------------------EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA   63 (118)
T ss_dssp             HHHHHHHHTTCHH--------------------HHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC
T ss_pred             HHHHHHHHCCCHH--------------------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             2899999877999--------------------99999984201223222222222222222222222223343202331


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             4799971889999819999999999839999998899999999999999999739499999999
Q 002539          742 RDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA  805 (911)
Q Consensus       742 rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LL  805 (911)
                      +|..|+||||+|+.+|+.++|++||++|||++.      +|..|.||||+|..    +.++.|+
T Consensus        64 ~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~~~------~d~~G~t~l~~a~~----~~i~~LL  117 (118)
T d1myoa_          64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTV------KGPDGLTALEATDN----QAIKALL  117 (118)
T ss_dssp             CSSSCSCHHHHHHTTTCCHHHHHHHTTCCCSSS------SSSSTCCCCCTCSS----TTTGGGG
T ss_pred             CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCEE------ECCCCCCHHHHHHH----HHHHHHC
T ss_conf             012332102233204732432433102000000------38999999999868----7998733

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=2.4e-18  Score=135.77  Aligned_cols=145  Identities=23%  Similarity=0.165  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             25999988623989378999999999997569999999994999997236999938999999199768875876499743
Q 002539          661 WDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN  740 (911)
Q Consensus       661 ~t~Ll~a~~~~~~~~~~~~~~ll~~alk~~l~~~Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN  740 (911)
                      .++|+.|+..++.+                    +++.|++.|++++ .|..|+||||+|+..++.++++.++......+
T Consensus         3 ~t~L~~Aa~~g~~~--------------------~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~   61 (153)
T d1awcb_           3 GKKLLEAARAGQDD--------------------EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD   61 (153)
T ss_dssp             HHHHHHHHHHTCHH--------------------HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred             CHHHHHHHHCCCHH--------------------HHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             97999999878999--------------------9999998699834-24478753334323222222222222222222


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             24799971889999819999999999839999998899999999999999999739499999999829978643575458
Q 002539          741 FRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK  820 (911)
Q Consensus       741 ~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~TPLhlAa~~Gh~eIvk~LLE~gl~sh~adlnlkd  820 (911)
                      ..+..+.+++++++...+.+++++|+.+|++++.      ++..|.||||+|+..|+.+++++|++.|     ++++.+|
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~g~T~L~~A~~~g~~~iv~~ll~~g-----ad~~~~d  130 (153)
T d1awcb_          62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQS  130 (153)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC------CCCCCCHHHHHHHHCCHHHEEEECCCCC-----CCCCCCC
T ss_conf             1222233323222233110122122246876123------2246734777664302224123114344-----6772668


Q ss_pred             CCCCCH-----HHHCHHHHHHH
Q ss_conf             889907-----63118999976
Q 002539          821 KDGDVA-----EVTGATAVQTV  837 (911)
Q Consensus       821 ~~G~ta-----~~~~~~vV~~L  837 (911)
                      ..|.||     ..+..++++.|
T Consensus       131 ~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         131 KFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCHHHHHHHCCCHHHHHHC
T ss_conf             9899999999985999999867

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.1e-19  Score=142.82  Aligned_cols=114  Identities=20%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHH
Q ss_conf             99389999991997688758764997432479997188999981999999999983999999889999999999-99999
Q 002539          713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGR-TPADL  791 (911)
Q Consensus       713 G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdinavtDpt~~D~~G~-TPLhl  791 (911)
                      +.++||+||..|+.++|++||++|+++|.+|..|+||||+|+ .|+.++|++|+++|++++.      ++..|. ||||+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~------~~~~~~~~~L~~   75 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------ADPATLTRPVHD   75 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------CCTTTCCCHHHH
T ss_pred             CHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCC
T ss_conf             705999999877999999999859741332221222222222-2222222212222222222------222222222222


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-----HHHCHHHHHHHH
Q ss_conf             99739499999999829978643575458889907-----631189999766
Q 002539          792 ASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-----EVTGATAVQTVP  838 (911)
Q Consensus       792 Aa~~Gh~eIvk~LLE~gl~sh~adlnlkd~~G~ta-----~~~~~~vV~~Ll  838 (911)
                      |+.+|+.+++++|+++|     ++++.+|..|.||     ..+..++++.|+
T Consensus        76 A~~~g~~~~v~~Ll~~g-----a~~~~~d~~G~T~l~~A~~~g~~~~v~~Ll  122 (125)
T d1bi7b_          76 AAREGFLDTLVVLHRAG-----ARLDVRDAWGRLPVDLAEELGHRDVARYLR  122 (125)
T ss_dssp             HHHHTCHHHHHHHHHHT-----CCSSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             22322222222221222-----223324578989999999868799999999

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=8.2e-17  Score=125.66  Aligned_cols=80  Identities=15%  Similarity=0.040  Sum_probs=73.0

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999949999972369999389999991997688758764997432479997188999981999999999983999999
Q 002539          695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA  774 (911)
Q Consensus       695 Lv~lLle~Gadin~~D~~G~TpLHlAA~~G~~~iVklLLe~GadIN~rD~~G~TPLH~AA~~G~~eiVklLL~~GAdina  774 (911)
                      ++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++++..-.
T Consensus        63 iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~~  142 (154)
T d1dcqa1          63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN  142 (154)
T ss_dssp             HHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf             99999974997333131210100011112333322122135755024478999999999993999999999993889778

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=6.1e-06  Score=53.78  Aligned_cols=70  Identities=40%  Similarity=0.822  Sum_probs=59.8

Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             886325654679965899971566686654498999973991899999988999888889889973889999719
Q 002539          510 IIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNR  584 (911)
Q Consensus       510 I~dfSP~wa~~~~~tKVli~G~fl~~~~~~T~LHlAc~fG~~eVv~~LLe~Gadvn~~p~d~~G~TPLhiAa~ng  584 (911)
                      |++++|.|+...++++|.|.|.++....     .++|+||...+....+......|..|++.+|.+++.++..++
T Consensus         2 It~isP~~G~~~GGt~V~I~G~~f~~~~-----~~~c~fG~~~~~~~~vs~~~i~C~tP~~~~G~v~v~Vs~ng~   71 (82)
T d2cxka1           2 VTDYSPEWSYPEGGVKVLITGPWQEASN-----NYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQ   71 (82)
T ss_dssp             CCEEECSEECTTCCCEEEEESSCCCCSS-----CEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTE
T ss_pred             EEEECCCCEECCCCEEEEEEECCCCCCC-----EEEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEEEEECCE
T ss_conf             9398189660899999999973666445-----079999720030599712599998475356158999998999