Citrus Sinensis ID: 002638

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------90

MSSQPNKFTKPAKPTSQGQQSSSANASRSSSLSSHLAMVEMKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENNGTVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPLLQSIHECLGSTDWATRKAAADALSALALHSSNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGSDDQKSSPVPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLTKGKAGNISEKAVVILKKKAPALSDKELNPEFFQNLSRGSGDLPVEVVVPRRCLNSSNSNNEEESDPSDLDSKGRSNRMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKDPRMRAPDVERELSGNRAGFSKTDSQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGSNFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRTPFGERFAQSDGVAASTRGRGPSWRSDMSDAWDFTAYCASRNGQLGSRRAPGGGPVDSRSPKSEHDNDQVGGRRAWDKGTGPVRLGEGPSARSVWQASKDEATLEAIRVAGEDSGTSRSARVAIPELTAEAMGDDNVGQERDPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWIQQLVELVLENGPHVLGIPMELKKELLLNLHEASTTMDPPEDWEGPAPDQLLLQLASAWEIELQQFDK

cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHcccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccc

*****************************************KQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSN*****VKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENNGTVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPLLQSIHECLGSTDWATRKAAADALSALALHSSNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIA***************************************************************************************************VEVVV*****************************************************************************************FINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGG****MVTLENRVRGLERV*********************************************************************************************************************************************************************************************DPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWIQQLVELVLENGPHVLGIPMELKKELLLNLHEAST*******WEGPAPDQLLLQLASAWEIELQQF**

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MSSQPNKFTKPAKPTSQGQQSSSANASRSSSLSSHLAMVEMKQKILTSLSKLADxxxxxxxxxxxxxxxxxxxxxSLPMLLNCLYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENNGTVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPLLQSIHECLGSTDWATRKAAADALSALALHSSNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGSDDQKSSPVPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLTKGKAGNISEKAVVILKKKAPALSDKELNPEFFQNLSRGSGDLPVEVVVPRRCLNSSNSNNEEESDPSDLDSKGRSNRMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKDPRMRAPDVERELSGNRAGFSKTDSQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSxxxxxxxxxxxxxxxxxxxxxLSISSGRRGSNFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRTPFGERFAQSDGVAASTRGRGPSWRSDMSDAWDFTAYCASRNGQLGSRRAPGGGPVDSRSPKSEHDNDQVGGRRAWDKGTGPVRLGEGPSARSVWQASKDEATLEAIRVAGEDSGTSRSARVAIPELTAEAMGDDNVGQERDPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWIQQLVELVLENGPHVLGIPMELKKELLLNLHEASTTMDPPEDWEGPAPDQLLLQLASAWEIELQQFDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Microtubule-associated protein TORTIFOLIA1	Plant-specific microtubule-associated protein (MAP) that regulates the orientation of cortical microtubules and the direction of organ growth.	probable	Q9T041

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1U6G, chain C
Confidence level:probable
Coverage over the Query: 44-217,258-321,338-351
View the alignment between query and template
View the model in PyMOL

Template: 1B3U, chain A
Confidence level:probable
Coverage over the Query: 26-318
View the alignment between query and template
View the model in PyMOL

Template: 4FDD, chain A
Confidence level:probable
Coverage over the Query: 45-186,201-220,240-306
View the alignment between query and template
View the model in PyMOL