Citrus Sinensis ID: 002706

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890
MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI
ccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccEEEEccccEEEEEEEEEEEccccccHHHHcccccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEEEccccccEEEEEccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccHHHHccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHccEEEcccccccccccccccccccccccccEEEEEEccccccccEEEEEccccccccccccEEEcccccccccHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccEEEEEcccccHHHHHHHHHHccccccccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEcccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
cccccEEEcccccccccccccccccccccccccccccccHccccEEEEEEcccccEEEEEEEEEEccEEEEEEEEcccHHcccHHHHHccccEEEEEEEEcccccccccccccHHHHHHcccccccccEEEEEEEEEccccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccccccHHHccccEccccccccEEcccccEcccccccEcccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHccccccHHHHcEccccccEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccHHHcccccccccHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEEcccccHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHccccHHHHcHHHHHHHcccEEEcccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccHHHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHccHHHHHccccccccccEccccccccHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHccEcccccEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccEccccccEccccc
mlnpqvhhqsqsirtlcplpkpflrgngqafrpaqlnpsfkkaskigvgfspsnnsIKAIFNLTEKSTKVKAVItvkpiipdplaLSSLVGALGLELVsaeldpktgeekptikGLALgvlgkdddgnikykaelkipasfgdvGAILVESDQLTEMYLQDIvldglpngpvnltcdswiqpkivdkqKRIFftnksylpsqtpnglKRLRAEELNnlqgdgqgerkrheriydydvyndlalpeikelarpvlggeehpyprrcrtgrpksfadpasesrsvsiyvprdeafadiklgqfsassLYSGLHALVPFLEAILIdkdlgfsslSDIDKVFNegielppelkdqplwqKILPILFKTVsntgkevfrfdtpetvdrdkffwirneefgretlaglnpysikllsqlplkstldpeiygppesaiTTELIEQEIGGLMTVNEAIKQKKLFIIDYHDAllpyvgklrqiegstlygsralfflnpdgtlrplaieltrppldgkpqwkqvftpsrhstdSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLsamhpinrllkphfryTMEINAKARLILVNagglvettffpgkysmEFSSVIydkqwrfdhealpkdlisrgmavedpnaphglkltiedypfandgLDLWDALKQWVTEYVNHyytdpslvesdEELQAWWTEIRtvghadkkdepwwpvlktpqdLIEIVTTIAWVASGQHAAVNFGqylyggyfpnrptmsrtnmptedqseADWKSflanpedtllqcfpSKMQAMQDMVILDtlsthspdeeylgkemepawgddpVIKAAFEKFNRKMQELEGIiddrnsnenlrnrtgagivpyellkpfsgpgatgkgvpysisi
mlnpqvhhqsqsirtlcplPKPFLRGNGQAFRPAQLNPSFKKASkigvgfspsnNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAeldpktgeekptikglalgvlgkdDDGNIKYKAElkipasfgdVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFtnksylpsqtpnglKRLRAEELnnlqgdgqgerkrherIYDYDVYNDLALPEIKELarpvlggeehpyprrcrtgrpksfadpasesrsvsiYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKtvsntgkevfrfdtpetvdrdkfFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTvghadkkdepwwpvLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKemepawgddPVIKAAFEKFNRKMQELEgiiddrnsnenlrnrtgagivpyellkpfsgpgatgkgvpysisi
MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPlalsslvgalglelvsaELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI
**********************************************GVGF****NSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAEL*********TIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYL*******************************RIYDYDVYNDLALPEIKELARPVL*****************************SIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFP**********************FLANPEDTLLQCFPSKMQAMQDMVILDTL****************AWGDDPVIKAAFEKFN***********************GAGIVPYELLK******************
********************************************************************KVKAVITVKPIIPDPLALSSLVGALGLEL*********************GVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFA***SESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRP*****PQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI
*************RTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQ********RHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGR************SVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRT**********DWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI
*L**QVHHQSQSIRTLCPLPKPFLRGNGQAFRP*QLNPS*KKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSIS*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query890 2.2.26 [Sep-21-2011]
O24370899 Linoleate 13S-lipoxygenas N/A no 0.994 0.984 0.594 0.0
P38418896 Lipoxygenase 2, chloropla yes no 0.884 0.878 0.569 0.0
Q8GSM2896 Lipoxygenase 2.3, chlorop N/A no 0.876 0.870 0.551 0.0
P38419924 Lipoxygenase 7, chloropla no no 0.915 0.882 0.548 0.0
Q84YK8941 Probable lipoxygenase 8, no no 0.901 0.852 0.550 0.0
P93184936 Lipoxygenase 2.1, chlorop N/A no 0.916 0.871 0.532 0.0
Q8GSM3932 Lipoxygenase 2.2, chlorop N/A no 0.885 0.845 0.509 0.0
O24371914 Linoleate 13S-lipoxygenas N/A no 0.949 0.924 0.467 0.0
Q9FNX8926 Lipoxygenase 4, chloropla no no 0.916 0.881 0.464 0.0
Q9LNR3919 Lipoxygenase 3, chloropla no no 0.917 0.889 0.460 0.0
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/904 (59%), Positives = 683/904 (75%), Gaps = 19/904 (2%)

Query: 1   MLNPQVHHQSQSIRTLCPL--PKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNN--- 55
           ML PQ+   SQS + L P     P       +F    LN +F+   K       + N   
Sbjct: 1   MLKPQLQQSSQSTKALIPSWNTNPLFLA---SFPINILNKNFRLKKKNNFRVHHNYNGAS 57

Query: 56  SIKAIFNLTEKSTKVKAVITVKPIIPDPLA-----LSSLVG-ALGLELVSAELDPKTGEE 109
           + KA+ + TEK+T VKAV+TV+  +   L+     +  L+G +L L +V+AELD KTG E
Sbjct: 58  TTKAVLSSTEKATGVKAVVTVQKQVNLNLSRGLDDIGDLLGKSLLLWIVAAELDHKTGIE 117

Query: 110 KPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN 169
           KP I+  A    G+D DG+  Y+A+  IP  FG+VGAIL+E++   EMY+++IV+DG  +
Sbjct: 118 KPGIRAYAH--RGRDVDGDTHYEADFVIPQDFGEVGAILIENEHHKEMYVKNIVIDGFVH 175

Query: 170 GPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRH 229
           G V +TC+SW+  K  +  KRIFFTNKSYLPSQTP+G+ RLR EEL  L+GDG GERK  
Sbjct: 176 GKVEITCNSWVHSKFDNPDKRIFFTNKSYLPSQTPSGVSRLREEELVTLRGDGIGERKVF 235

Query: 230 ERIYDYDVYNDLALPEIK--ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
           ERIYDYDVYNDL   +    +  RPVLGG+E PYPRRC+TGRP+S  DP SE+RS  +YV
Sbjct: 236 ERIYDYDVYNDLGEADSNNDDAKRPVLGGKELPYPRRCKTGRPRSKKDPLSETRSTFVYV 295

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPE 347
           PRDEAF+++K   FS +++YS LHA+VP LE+++ D +LGF     ID +FN G++LP  
Sbjct: 296 PRDEAFSEVKSVAFSGNTVYSVLHAVVPALESVVTDPNLGFPHFPAIDSLFNVGVDLPGL 355

Query: 348 LKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSI 407
              +     ++P L K +S+T K+V  F++P+ V RDKF W R+ EF R+TLAGLNPYSI
Sbjct: 356 GDKKSGLFNVVPRLIKAISDTRKDVLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSI 415

Query: 408 KLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPY 467
           +L+++ PL+S LDP++YGPPES IT ELIE+EIG  MTV +A++QKKLFI+DYHD LLPY
Sbjct: 416 RLVTEWPLRSKLDPKVYGPPESEITKELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPY 475

Query: 468 VGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSR-HSTDSW 526
           V K+ +++GS LYGSR +FFL P GTL+PLAIELTRPP+D KPQWK+V++P+  ++T +W
Sbjct: 476 VNKVNELKGSMLYGSRTIFFLTPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAW 535

Query: 527 LWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTME 586
           LW LAKAH L HD+GYHQL+SHWLRTHCC EPYIIA+NR+LSAMHPI RLL PHFRYTME
Sbjct: 536 LWKLAKAHVLSHDSGYHQLVSHWLRTHCCTEPYIIASNRQLSAMHPIYRLLHPHFRYTME 595

Query: 587 INAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPN 646
           INA AR  L+NA G++E++FFPGKY++E SS+ Y  +WRFD EALP++LISRG+AVEDPN
Sbjct: 596 INALAREALINANGVIESSFFPGKYAIELSSIAYGAEWRFDQEALPQNLISRGLAVEDPN 655

Query: 647 APHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVG 706
            PHGLKL IEDYPFANDGL LWD LKQWVT YVNHYY   +L+ESD+ELQAWW+EI+ VG
Sbjct: 656 EPHGLKLAIEDYPFANDGLVLWDILKQWVTNYVNHYYPQTNLIESDKELQAWWSEIKNVG 715

Query: 707 HADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMP 766
           H DK+DEPWWP LKTP DLI I+TTI WV SG HAAVNFGQY Y GYFPNRPT++R+ MP
Sbjct: 716 HGDKRDEPWWPELKTPNDLIGIITTIVWVTSGHHAAVNFGQYSYAGYFPNRPTVARSKMP 775

Query: 767 TEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGD 826
           TED +  +W+ F+  PE+ LL+CFPS++QA + M ILD LS HSPDEEY+G+++EP W +
Sbjct: 776 TEDPTAEEWEWFMNKPEEALLRCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWAE 835

Query: 827 DPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPY 886
           DPVI AAFE F+ K++ELEGIID RN++  L NR GAG++PYELLKP+S PG TGKGVPY
Sbjct: 836 DPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPY 895

Query: 887 SISI 890
           SISI
Sbjct: 896 SISI 899
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query890
71999169898 lipoxygenase LOX1 [Populus deltoides] 0.994 0.985 0.638 0.0
224053392897 predicted protein [Populus trichocarpa] 0.993 0.985 0.633 0.0
18461098895 lipoxygenase [Citrus jambhiri] 0.983 0.977 0.647 0.0
71999171903 lipoxygenase LOX2 [Populus deltoides] 0.988 0.974 0.627 0.0
255544764900 lipoxygenase, putative [Ricinus communis 0.988 0.977 0.631 0.0
213876486900 lipoxygenase [Camellia sinensis] 0.988 0.977 0.617 0.0
229554825901 lipoxygenase [Camellia sinensis] 0.995 0.983 0.625 0.0
308943877901 lipoxygenase [Camellia sinensis] 0.995 0.983 0.625 0.0
32454712900 lipoxygenase, partial [Nicotiana attenua 0.993 0.982 0.627 0.0
225435556901 PREDICTED: linoleate 13S-lipoxygenase 2- 0.993 0.981 0.613 0.0
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/903 (63%), Positives = 709/903 (78%), Gaps = 18/903 (1%)

Query: 1   MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPA-QLNPSFKKASKIGVGFSPSNNSIKA 59
           ML PQ+H    S +    LPKPF+ G+G A  P    + S K   K+ VG+   + SIK+
Sbjct: 1   MLKPQLHQSQLSTKNPFLLPKPFIHGSGHASFPVYSRSLSTKANKKVRVGYK--HGSIKS 58

Query: 60  IFNLTEKSTKVKAVITVKPIIPDPLA----------LSSLVG-ALGLELVSAELDPKTGE 108
           I ++T++ST +KAV+TVK  + D              + L G  L LELVSAELDPKTG 
Sbjct: 59  IASVTQQSTDIKAVVTVKETVVDFWTEIGIERGLDDFTDLFGKTLLLELVSAELDPKTGL 118

Query: 109 EKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLP 168
           EKP+I+  A  +  + +D  IKY+A+  +P  FG+VGAI VE++   EMYL D+VLDG P
Sbjct: 119 EKPSIRKYAHKIDHEGED--IKYEADFVVPPDFGEVGAIFVENEHHKEMYLHDVVLDGFP 176

Query: 169 NGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKR 228
            GPV++TCDSWI PK  +K+KR+FFTNKSYLPS+TPNGL +LR EEL  L+G+  GERK+
Sbjct: 177 TGPVHVTCDSWIHPKFDNKKKRLFFTNKSYLPSETPNGLTKLRKEELETLRGNDSGERKK 236

Query: 229 HERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
            ERIYDYDVYNDL  P+   E ARPVLGG+EHPYPRRCRTGRP++ +DP +E+RS S YV
Sbjct: 237 GERIYDYDVYNDLGNPDSDPETARPVLGGQEHPYPRRCRTGRPRTESDPLTETRSSSFYV 296

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPE 347
           PRDE F++IK+G FSA +L S LHALVP L   ++D DLGF   S ID +FNEGI LPP 
Sbjct: 297 PRDEEFSEIKMGTFSARTLKSVLHALVPSLSTAIVDSDLGFPFFSSIDALFNEGINLPP- 355

Query: 348 LKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSI 407
           LK Q  W+ +LP LF+ +++  K++ +F+TPET++RD+FFW R+EEF R+TL+GLNP SI
Sbjct: 356 LKKQGFWKDLLPNLFRAITDGTKDILKFETPETMERDRFFWFRDEEFARQTLSGLNPCSI 415

Query: 408 KLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPY 467
           K++++ PL+S LDPEIYGP ESAITTE++EQEI G MT  +A+K +KLFI+DYHD  LP+
Sbjct: 416 KMVTEWPLRSKLDPEIYGPQESAITTEMVEQEIKGFMTCGQAVKDQKLFILDYHDLFLPF 475

Query: 468 VGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWL 527
           V K+R+++G+TLYGSR LFFL  +GTLRPLAIELTRPP+DGKPQWKQVF P+ HSTD WL
Sbjct: 476 VSKIRELKGTTLYGSRTLFFLTHEGTLRPLAIELTRPPMDGKPQWKQVFRPTWHSTDVWL 535

Query: 528 WTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEI 587
           W LAKAH L H++GYHQLISHWLRTHCC EPYIIAA+R+LS MHPI RLL PHFRYTMEI
Sbjct: 536 WRLAKAHVLAHESGYHQLISHWLRTHCCTEPYIIAAHRQLSEMHPIYRLLHPHFRYTMEI 595

Query: 588 NAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNA 647
           NA AR  L++A G++ET+FFPGKYSME SSV+YD++WRFD+EALPKDLI+RGMAVEDP+A
Sbjct: 596 NALARQYLISAKGVIETSFFPGKYSMELSSVVYDQEWRFDYEALPKDLINRGMAVEDPSA 655

Query: 648 PHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGH 707
           PHGLKL +EDYP+ANDGL LWD +K+WV++YVNHYY D SL+ SD ELQAWWTE+RTVGH
Sbjct: 656 PHGLKLMVEDYPYANDGLVLWDIIKEWVSDYVNHYYPDSSLIVSDNELQAWWTEVRTVGH 715

Query: 708 ADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPT 767
           ADKKDEPWWPVLKTPQDLIE +TTI W+ASG HAAVNFGQY Y GYFPNRPT +R NMPT
Sbjct: 716 ADKKDEPWWPVLKTPQDLIETLTTIIWIASGHHAAVNFGQYTYAGYFPNRPTTARMNMPT 775

Query: 768 EDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDD 827
           ED ++   K F   PE  LL  FPS++QA   M ILD LS HSPDEEYLG+++EPAW ++
Sbjct: 776 EDPNDELLKLFWEKPEVILLTTFPSQIQATTVMAILDVLSNHSPDEEYLGQQIEPAWTEE 835

Query: 828 PVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYS 887
           P I AAF KFN +++E EGIID+RN++  L+NR GAG+VPYELLKPFS PG TGKGVPYS
Sbjct: 836 PAINAAFVKFNGRLKEFEGIIDERNADTKLKNRNGAGVVPYELLKPFSDPGVTGKGVPYS 895

Query: 888 ISI 890
           ISI
Sbjct: 896 ISI 898

Source: Populus deltoides

Species: Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18461098|dbj|BAB84352.1| lipoxygenase [Citrus jambhiri] Back     alignment and taxonomy information
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|32454712|gb|AAP83137.1| lipoxygenase, partial [Nicotiana attenuata] Back     alignment and taxonomy information
>gi|225435556|ref|XP_002285574.1| PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Vitis vinifera] gi|297746381|emb|CBI16437.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query890
TAIR|locus:2096915896 LOX2 "lipoxygenase 2" [Arabido 0.877 0.871 0.573 3.8e-252
UNIPROTKB|P38419924 CM-LOX1 "Lipoxygenase 7, chlor 0.885 0.852 0.555 4.8e-245
TAIR|locus:2030215926 LOX4 "lipoxygenase 4" [Arabido 0.879 0.845 0.475 5.2e-207
TAIR|locus:2008808917 LOX6 "lipoxygenase 6" [Arabido 0.882 0.856 0.476 1.3e-203
TAIR|locus:2018848919 LOX3 "lipoxygenase 3" [Arabido 0.880 0.853 0.469 5.6e-203
TAIR|locus:2011030859 LOX1 "lipoxygenase 1" [Arabido 0.848 0.878 0.467 1e-185
TAIR|locus:2087837886 LOX5 [Arabidopsis thaliana (ta 0.834 0.838 0.450 2.5e-175
UNIPROTKB|P29250870 LOX1.1 "Linoleate 9S-lipoxygen 0.831 0.850 0.430 1.7e-162
ZFIN|ZDB-GENE-060623-19676 zgc:136911 "zgc:136911" [Danio 0.383 0.504 0.319 1.6e-39
UNIPROTKB|E1BIT6711 ALOXE3 "Uncharacterized protei 0.351 0.440 0.295 1.7e-38
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2428 (859.8 bits), Expect = 3.8e-252, P = 3.8e-252
 Identities = 455/794 (57%), Positives = 571/794 (71%)

Query:   102 LDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQD 161
             +  KT +++ T++  A  V  +  D   KY+ E ++P  FG VGAI +++    +++L+ 
Sbjct:   111 ISAKT-DQRITVEDYAQRVWAEAPDE--KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKG 167

Query:   162 IVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGD 221
             + L  LP G +  TC+SW+ PK VD  KRIFF++KSYLPSQTP  LK+ R EEL  LQG 
Sbjct:   168 VELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGK 226

Query:   222 GQ---GERKRHERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPA 277
              +   GE  + ERIYDYDVYND+  P+   ELARPV+GG  HPYPRRC+TGR     DP+
Sbjct:   227 NREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGGLTHPYPRRCKTGRKPCETDPS 286

Query:   278 SESR-SVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDK 336
             SE R     YVPRDE F+  K   F+  ++ + L ++ P +E++L+     F     I  
Sbjct:   287 SEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQN 346

Query:   337 VFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGR 396
             +F EGI+LP   KD  L   +LP + K +     ++ +FD P  ++RD+F W+R++EF R
Sbjct:   347 LFEEGIQLP---KDAGLLP-LLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFAR 402

Query:   397 ETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLF 456
             +TLAGLNPYSI+L+ + PL S LDP +YG P S IT E++E+E+ G MTV+EA+K K+LF
Sbjct:   403 QTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEALKNKRLF 462

Query:   457 IIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVF 516
             ++DYHD LLPYV K+R++  +TLY SR LFFL+ D TLRP+AIELT PP   KPQWKQVF
Sbjct:   463 VLDYHDLLLPYVNKVRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQWKQVF 522

Query:   517 TPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRL 576
             TP   +T  WLW LAK H + HD GYHQLISHWLRTH C EPYIIAANR+LSAMHPI RL
Sbjct:   523 TPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMHPIYRL 582

Query:   577 LKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLI 636
             L PHFRYTMEINA+AR  LVN GG++ET F+PGKY++E SS +Y K WRFD E LP DLI
Sbjct:   583 LHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLI 642

Query:   637 SRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQ 696
              RG+A ED  A HG++LTI DYPFANDGL LWDA+K+WVT+YV HYY D  L+ SDEELQ
Sbjct:   643 KRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQ 702

Query:   697 AWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPN 756
              WW+E+R +GH DKKDEPWWPVLKT  DLI +VTTIAWV SG HAAVNFGQY YGGYFPN
Sbjct:   703 GWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPN 762

Query:   757 RPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYL 816
             RPT +R  MPTED ++   K F  +PE  LL+ +PS+ QA   MV LD LSTHSPDEEY+
Sbjct:   763 RPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYI 822

Query:   817 GKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSG 876
             G++ E +W ++PVI AAFE+F  K+Q LEG+ID+RN N  L+NR GAG+V YELLKP S 
Sbjct:   823 GEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSE 882

Query:   877 PGATGKGVPYSISI 890
              G TG GVPYSISI
Sbjct:   883 HGVTGMGVPYSISI 896
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA;TAS
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0080027 "response to herbivore" evidence=IEP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IMP;IDA
GO:0009620 "response to fungus" evidence=IEP
GO:0034440 "lipid oxidation" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA;TAS
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009414 "response to water deprivation" evidence=TAS
GO:0051707 "response to other organism" evidence=TAS
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BIT6 ALOXE3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P93184LOX21_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.53250.91680.8717N/Ano
P38418LOX2_ARATH1, ., 1, 3, ., 1, 1, ., 1, 20.56960.88420.8783yesno
Q8GSM3LOX22_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.50960.88530.8454N/Ano
O24370LOX21_SOLTU1, ., 1, 3, ., 1, 1, ., 1, 20.59400.99430.9844N/Ano
Q8GSM2LOX23_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.55160.87640.8705N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.110.691
3rd Layer1.13.11.120.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query890
PLN02305918 PLN02305, PLN02305, lipoxygenase 0.0
pfam00305667 pfam00305, Lipoxygenase, Lipoxygenase 0.0
PLN02264919 PLN02264, PLN02264, lipoxygenase 0.0
PLN02337866 PLN02337, PLN02337, lipoxygenase 0.0
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 1e-34
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 5e-12
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 6e-08
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information 
 Score =  924 bits (2389), Expect = 0.0
 Identities = 425/876 (48%), Positives = 577/876 (65%), Gaps = 31/876 (3%)

Query: 36  LNPSFKKA---SKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLA------L 86
           +  S  ++   S  G    PS+ S  A          V+AVIT++  I + +        
Sbjct: 53  VEESGGESANKSVDGSSLLPSSRSKYA------GGIDVRAVITIRKKIKEKITEKFEDQW 106

Query: 87  SSLVGALG----LELVSAELDPKTGEEKPTIKGLALGVLGK--DDDGNIKYKAELKIPAS 140
              +  +G    ++LVS E+DP TG  K +++    G L K  +D   ++Y A+  +P  
Sbjct: 107 EYFMNGIGQGILIQLVSEEIDPVTGSGK-SVESSVRGWLPKPSNDPHIVEYAADFTVPFD 165

Query: 141 FGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLP 200
           FG  GA+LV +    E YL +IV+ G  +GP+    ++WI  +  + + RI F N++YLP
Sbjct: 166 FGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLP 225

Query: 201 SQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKE-LARPVLGGEEH 259
           SQTP G+K LR E+L +L+G+G+GERK H+RIYDY  YNDL  P+  E LARPVLGGEE 
Sbjct: 226 SQTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEW 285

Query: 260 PYPRRCRTGRPKSFADPASESRSVS---IYVPRDEAFADIKLGQFSASSLYSGLHALVPF 316
           PYPRRCRTGRP +  DP  ESR      +YVPRDE F +IK   FSA  L + LH L+P 
Sbjct: 286 PYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPS 345

Query: 317 LEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFD 376
           + A L   D+ F+  SDIDK++N+GI L  E          L    K V +  + + ++D
Sbjct: 346 IAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVLSVSERLLKYD 405

Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
            P  + RD+F W+R+ EF R+ LAG+NP +I++L + P+ S LDP +YGPPESA+T ELI
Sbjct: 406 IPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELI 465

Query: 437 EQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRP 496
           E+E+ G MTV +AI++K+LFI+DYHD LLP++ K+  +     Y SR +FF +  G LRP
Sbjct: 466 ERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRP 524

Query: 497 LAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCV 556
           +AIEL+ PP    P  K V+T    +T  W+W LAKAH   +D G HQL++HWLRTH C+
Sbjct: 525 IAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACM 584

Query: 557 EPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFS 616
           EPYIIA +R+LSAMHPI +LL PH RYT+EINA AR  L+N GG++E  F PGKY+ME S
Sbjct: 585 EPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYAMELS 644

Query: 617 SVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVT 676
           S  Y   WRFD EALP DLI RGMA EDP+ P G++L IEDYP+A DGL +W A+K+WV 
Sbjct: 645 SAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVE 704

Query: 677 EYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVA 736
            YV+H+Y++P+ + SD ELQAWW EI+  GH DK++EPWWP L T +DL  I+TT+ W+A
Sbjct: 705 SYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIA 764

Query: 737 SGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQA 796
           SGQHAA+NFGQY +GGY PNRPT+ R  +P E+  + D++ F+ NP+ T L   P+++QA
Sbjct: 765 SGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEN--DPDYEKFIRNPQYTFLSSLPTQLQA 822

Query: 797 MQDMVILDTLSTHSPDEEYLGK--EMEPAWGDDPVIKAAFEKFNRKMQELEGIIDDRNSN 854
            + M + DTLSTHSPDEEYLG+   +   W +D  +   F KF+ +++E+E  I++RN +
Sbjct: 823 TKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKD 882

Query: 855 ENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI 890
             L+NR GAGI PYELL P SGPG TG+G+P SISI
Sbjct: 883 IRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918

Length = 918
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 890
PLN02305918 lipoxygenase 100.0
PLN02264919 lipoxygenase 100.0
PLN02337866 lipoxygenase 100.0
PF00305667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.11
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 98.72
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.46
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.2
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 97.82
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 97.81
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.6
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.58
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 97.33
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=1e-264  Score=2280.90  Aligned_cols=821  Identities=50%  Similarity=0.934  Sum_probs=776.9

Q ss_pred             cceeEEeeecc-eeeeEEEEecccCCCcc-ccccccc-cEEEEEEecccCCCCCCcc---cccccccccCCCCCCCCceE
Q 002706           57 IKAIFNLTEKS-TKVKAVITVKPIIPDPL-ALSSLVG-ALGLELVSAELDPKTGEEK---PTIKGLALGVLGKDDDGNIK  130 (890)
Q Consensus        57 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g-~~~l~lvS~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  130 (890)
                      +||+|++|+++ ++++.+.+      ..+ +++|++| +|+|||||++++|+||+||   ++|++|+++.. .. +++++
T Consensus        84 i~~~v~~~~~~~~~~~~~~~------~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~~-~~-~~~~~  155 (918)
T PLN02305         84 VRAVITIRKKIKEKITEKFE------DQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPS-ND-PHIVE  155 (918)
T ss_pred             EEEEEEEEeecccchhhccc------chhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCCC-CC-CCceE
Confidence            55555555554 44444332      234 6899999 9999999999999999555   89999998633 32 45779


Q ss_pred             EEEEEecCCCCCCeeEEEEEeCCCCceeeeeEEEeecCCCcEEEeecccccCCCCCCcceEEeeCccccCCCCChhhHHH
Q 002706          131 YKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRL  210 (890)
Q Consensus       131 y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~l~~~  210 (890)
                      |+++|+|+++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+++||||+||+|||++||++|++|
T Consensus       156 ~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~  235 (918)
T PLN02305        156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL  235 (918)
T ss_pred             EEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhCCCCCcccccCeEeeccccCCCCCCccc-ccccccCCCCCCCCCCccCCCCCCCCCCCCCCCccC---CCc
Q 002706          211 RAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSV---SIY  286 (890)
Q Consensus       211 R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~-~~~rpvlgg~~~pyprR~rtgr~~~~~dp~~e~~~~---~~y  286 (890)
                      ||+||++|||||+||||+||||||||||||||+||++ +++||||||++|||||||||||+|+++||.||||..   .+|
T Consensus       236 Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~Y  315 (918)
T PLN02305        236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY  315 (918)
T ss_pred             HHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcC
Confidence            9999999999999999999999999999999999999 999999999669999999999999999999999953   479


Q ss_pred             cCCCCccCccccccchhchhHHhhhhhhHHHHHHhccCCCCCCCHHHHHHHhccCCCCCCCCCCchhhhhh-hh-hhHhh
Q 002706          287 VPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI-LP-ILFKT  364 (890)
Q Consensus       287 vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-~~-~~~~~  364 (890)
                      |||||+|+++|++||+++++|+++|.++|.|+++++.+..+|++|+||++||++|+++| .. ..+..+.+ +| .+.+.
T Consensus       316 vPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~-~~-~~~~~~~~p~~~~~~~~  393 (918)
T PLN02305        316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLK-TE-EPKDIGLNPFLGNFMKQ  393 (918)
T ss_pred             CCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCC-ch-hhhhhhcCCchHHHHHH
Confidence            99999999999999999999999999999999999888999999999999999999999 32 00222223 32 45555


Q ss_pred             hccCCccccccCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHhhCCcc
Q 002706          365 VSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLM  444 (890)
Q Consensus       365 ~~~~~~~~l~fp~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~  444 (890)
                      ++++++.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||+..|+| +
T Consensus       394 i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~  472 (918)
T PLN02305        394 VLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-M  472 (918)
T ss_pred             hhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-C
Confidence            588899999999999999999999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             cHHHHHhCCcEEEeecccccccccccccCCCCceecccceeEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCC
Q 002706          445 TVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTD  524 (890)
Q Consensus       445 Tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VftP~d~~~~  524 (890)
                      ||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||++++++
T Consensus       473 TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~  552 (918)
T PLN02305        473 TVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATT  552 (918)
T ss_pred             cHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999998777778899999877778


Q ss_pred             chHHHHHHHHHhhhcchhhhhhhhhccccchhhHHHHHHhccCCCcCchhhccchhhhhhhhhHHHHHhcccCCCCcccc
Q 002706          525 SWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVET  604 (890)
Q Consensus       525 ~~~W~LAK~~v~~aD~~~HqlisHll~THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~  604 (890)
                      +|.|+||||||++||++|||+|+||++|||||||||||||||||++|||||||+||||+||+||++||++|||+||+||+
T Consensus       553 ~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~  632 (918)
T PLN02305        553 HWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEA  632 (918)
T ss_pred             chHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCchhHHHHHHHHHhcccCCCccCCchHHHhcCCCCCCCCCCCcccccccCCCCchhhHHHHHHHHHHHHhhcccccc
Q 002706          605 TFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYT  684 (890)
Q Consensus       605 ~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~~~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V~~yv~~YY~  684 (890)
                      +|++|+|+|+|++++|++.|+|++++||+||++|||+++|+++|||++|.|||||||+|||+||+||++||++||++||+
T Consensus       633 ~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~  712 (918)
T PLN02305        633 CFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYS  712 (918)
T ss_pred             eeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCC
Confidence            99999999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCCcccCCCC
Q 002706          685 DPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTN  764 (890)
Q Consensus       685 sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p  764 (890)
                      +|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++
T Consensus       713 ~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp  792 (918)
T PLN02305        713 EPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKL  792 (918)
T ss_pred             ChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHhhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccCCCCC--CCCCcHHHHHHHHHHHHHHH
Q 002706          765 MPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEP--AWGDDPVIKAAFEKFNRKMQ  842 (890)
Q Consensus       765 ~P~~kkg~~~~~~l~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~  842 (890)
                      ||++  ++.+|++|+.+||++||++||++.||+.+|+++++||+|++||+|||++.++  .|+.|+++++||++|+++|+
T Consensus       793 ~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~  870 (918)
T PLN02305        793 IPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLE  870 (918)
T ss_pred             CCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHH
Confidence            9988  6778999999999999999999999999999999999999999999999876  79999999999999999999


Q ss_pred             HHHHHHhhhcCCccccccCCCccCCceeeccCCCCCCCcCCCCccccC
Q 002706          843 ELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI  890 (890)
Q Consensus       843 ~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  890 (890)
                      +||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus       871 eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI  918 (918)
T PLN02305        871 EIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI  918 (918)
T ss_pred             HHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence            999999999999999999999999999999999999999999999998

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query890
1ik3_A857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 0.0
2iuj_A853 Crystal Structure Of Soybean Lipoxygenase-B Length 0.0
1rov_A857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 0.0
2iuk_A864 Crystal Structure Of Soybean Lipoxygenase-D Length 0.0
3bnd_A839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 0.0
3pzw_A839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 0.0
2sbl_B839 The Three-Dimensional Structure Of An Arachidonic A 0.0
3bnb_A839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 0.0
3bne_A839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 0.0
1fgr_A839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 0.0
1fgq_A839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 0.0
3bnc_A839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 0.0
1fgt_A839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 0.0
1fgm_A839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 0.0
1fgo_A839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 0.0
1y4k_A839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 0.0
3dy5_A1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 1e-44
3fg1_A696 Crystal Structure Of Delta413-417:gs Lox Length = 6 2e-44
3v92_B691 S663a Stable-5-Lox Length = 691 2e-44
3o8y_A691 Stable-5-Lipoxygenase Length = 691 2e-44
3v98_A691 S663d Stable-5-Lox Length = 691 2e-44
3fg4_A696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 3e-44
2fnq_A699 Insights From The X-Ray Crystal Structure Of Coral 4e-44
3fg3_A696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 1e-43
3vf1_A698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 1e-42
3rde_A573 Crystal Structure Of The Catalytic Domain Of Porcin 2e-36
3d3l_A541 The 2.6 A Crystal Structure Of The Lipoxygenase Dom 4e-35
1lox_A662 Rabbit Reticulocyte 15-Lipoxygenase Length = 662 7e-35
2p0m_A662 Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy 7e-35
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure 
Iteration: 1

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/778 (46%), Positives = 490/778 (62%), Gaps = 29/778 (3%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
           G   +K   +     G  GA  +++   TE +L  + L+ +PN G ++  C+SWI    +
Sbjct: 95  GQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKL 154
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
            K  RIFF N++YLPS+TP  L + R EEL+NL+GDG GERK  ERIYDYDVYNDL  P+
Sbjct: 155 FKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPD 214
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
             E  ARPVLGG +  PYPRR RTGR  +  DP SESRS  +Y+PRDEAF  +K   F  
Sbjct: 215 KGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLT 274
Query: 304 SSLYSGLHALVPFLEAILIDKDLGFS-----SLSDIDKVFNEGIELPPEL--KDQPLWQK 356
             L S    ++P L++     DL F+     S  ++  +++ GI+LP ++  K  PL   
Sbjct: 275 YGLKSVSQNVLPLLQSAF---DLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPL--- 328
Query: 357 ILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLK 416
             P+L +     G++  +F  P+ +   K  W+ +EEF RE LAG+NP  I+ L   P +
Sbjct: 329 --PVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPR 386
Query: 417 STLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEG 476
           S LD ++YG   S IT E +E  + GL TV+EAI+ K+LF++D+HD ++PY   LR+I  
Sbjct: 387 SKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQNKRLFLLDHHDPIMPY---LRRINA 442
Query: 477 STL--YGSRALFFLNPDGTLRPLAIELT--RPPLDGKPQWKQVFTPSRHSTDSWLWTLAK 532
           ++   Y +R + FL  DGTLRPLAIEL+   P  D    + QVF P+    +S +W LAK
Sbjct: 443 TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAK 502
Query: 533 AHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKAR 592
           A+ +V+D+ YHQL+SHWL TH  VEP+IIA NR LS +HPI +LL PH+R TM IN  AR
Sbjct: 503 AYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLAR 562
Query: 593 LILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLK 652
           L LVN GG++E TF  G+YS+E S+V+Y K W F  +ALP DLI RGMA+EDP+ PHG++
Sbjct: 563 LSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKRGMAIEDPSCPHGIR 621
Query: 653 LTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKD 712
           L IEDYP+  DGL++WDA+K WV EYV  YY     +  D ELQA W E+  VGH DKK+
Sbjct: 622 LVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKN 681
Query: 713 EPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSE 772
           EPWWP ++T ++L+E    I W AS  HAAVNFGQY YGG   NRPT+SR  MP  ++  
Sbjct: 682 EPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMP--EKGS 739
Query: 773 ADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKA 832
           A+++    NP+   L+    K Q + D+ +++ LS H+ DE YLG+   P W  D     
Sbjct: 740 AEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALE 799
Query: 833 AFEKFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI 890
           AF++F  K+ ++E  + +RN++E LRNR G   +PY LL P S  G T +G+P SISI
Sbjct: 800 AFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 Back     alignment and structure
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 Back     alignment and structure
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query890
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 0.0
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 1e-168
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 1e-168
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-163
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 1e-161
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 1e-161
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 1e-154
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 1e-153
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  876 bits (2264), Expect = 0.0
 Identities = 343/848 (40%), Positives = 495/848 (58%), Gaps = 29/848 (3%)

Query: 63  LTEKSTKVKAVITVKP---IIPDPLA-----LSSLVG-ALGLELVSAELDPKTGEEKPTI 113
           +     K+K  + + P   +  +P       L++ +G ++ L+L+SA      G+ K   
Sbjct: 1   MFSAGHKIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGK 60

Query: 114 KGLALGV---LGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN- 169
                G+   L     G   +    +   S G  GA  +++    E +L+ + L+ + N 
Sbjct: 61  DTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQ 120

Query: 170 GPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRH 229
           G +   C+SW+    + K  RIFF N +Y+PS+TP  L   R EEL +L+G+G GERK +
Sbjct: 121 GTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEY 180

Query: 230 ERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
           +RIYDYDVYNDL  P+   +LARPVLGG    PYPRR RTGR  +  DP +E +    YV
Sbjct: 181 DRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYV 240

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKD--LGFSSLSDIDKVFNEGIELP 345
           PRDE    +K          S    + P  E+    K   + F S  D+  ++  GI+LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300

Query: 346 PELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPY 405
            ++         LP++ +     G+ + +F  P  V   +  W+ +EEF RE +AG+NP 
Sbjct: 301 RDVIS---TIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357

Query: 406 SIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALL 465
            I+ L + P KS LDP IYG   S IT + ++ +     T++EA+  ++LF++DYHD  +
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG---YTMDEALGSRRLFMLDYHDIFM 414

Query: 466 PYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHST 523
           PYV ++ Q+  +  Y +R + FL  DGTL+P+AIEL+ P   G       QV  P++   
Sbjct: 415 PYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGV 474

Query: 524 DSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRY 583
           +S +W LAKA+ +V+D+ YHQL+SHWL TH  +EP++IA +R LS +HPI +LL PH+R 
Sbjct: 475 ESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRN 534

Query: 584 TMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVE 643
            M INA AR  L+NA G++ETTF P KYS+E SS +Y K W F  +ALP DLI RG+A++
Sbjct: 535 NMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIK 593

Query: 644 DPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSLVESDEELQAWWTEIR 703
           DP+ PHG++L IEDYP+A DGL++W A+K WV EYV  YY     V++D ELQ WW E  
Sbjct: 594 DPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAV 653

Query: 704 TVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRT 763
             GH D KD+PWWP L+T +DL+E+   I W+AS  HAAVNFGQY YGG   NRPT SR 
Sbjct: 654 EKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRR 713

Query: 764 NMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPA 823
            +P +   E  ++  + N E   L+   SK+  +  + +++ LSTH+ DE YLG+   P 
Sbjct: 714 LLPEKGTPE--YEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPH 771

Query: 824 WGDDPVIKAAFEKFNRKMQELEGIIDDRNSNENLR-NRTGAGIVPYELLKPFSGPGATGK 882
           W  D     AF+KF  K++E+E  +  RN++ +L+ NR G   +PY LL P S  G T +
Sbjct: 772 WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFR 831

Query: 883 GVPYSISI 890
           G+P SISI
Sbjct: 832 GIPNSISI 839
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 890
d3bnea1690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 0.0
d2p0ma1551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 1e-180
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 5e-30
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  876 bits (2266), Expect = 0.0
 Identities = 309/701 (44%), Positives = 431/701 (61%), Gaps = 20/701 (2%)

Query: 199 LPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEI-KELARPVLGG- 256
           +PS+TP  L   R EEL +L+G+G GERK ++RIYDYDVYNDL  P+  ++LARPVLGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 257 EEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPF 316
              PYPRR RTGR  +  DP +E +    YVPRDE    +K          S    + P 
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPA 120

Query: 317 LEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILF--KTVSNTGKEV 372
            E+    K   + F S  D+  ++  GI+LP     + +   I+P+    +     G+ +
Sbjct: 121 FESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-----RDVISTIIPLPVIKELYRTDGQHI 175

Query: 373 FRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAIT 432
            +F  P  V   +  W+ +EEF RE +AG+NP  I+ L + P KS LDP IYG   S IT
Sbjct: 176 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 235

Query: 433 TELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDG 492
            + ++ +     T++EA+  ++LF++DYHD  +PYV ++ Q+  +  Y +R + FL  DG
Sbjct: 236 ADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDG 292

Query: 493 TLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWL 550
           TL+P+AIEL+ P   G       QV  P++   +S +W LAKA+ +V+D+ YHQL+SHWL
Sbjct: 293 TLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWL 352

Query: 551 RTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGK 610
            TH  +EP++IA +R LS +HPI +LL PH+R  M INA AR  L+NA G+ ETTF P K
Sbjct: 353 NTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSK 412

Query: 611 YSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDA 670
           YS+E SS +Y K W F  +ALP DLI RG+A++DP+ PHG++L IEDYP+A DGL++W A
Sbjct: 413 YSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 471

Query: 671 LKQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVT 730
           +K WV EYV  YY     V++D ELQ WW E    GH D KD+PWWP L+T +DL+E+  
Sbjct: 472 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 531

Query: 731 TIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCF 790
            I W+AS  HAAVNFGQY YGG   NRPT SR  +P +   E  ++  + N E   L+  
Sbjct: 532 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMINNHEKAYLRTI 589

Query: 791 PSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKFNRKMQELEGIIDD 850
            SK+  +  + +++ LSTH+ DE YLG+   P W  D     AF+KF  K++E+E  +  
Sbjct: 590 TSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVR 649

Query: 851 RNSNENLR-NRTGAGIVPYELLKPFSGPGATGKGVPYSISI 890
           RN++ +L+ NR G   +PY LL P S  G T +G+P SISI
Sbjct: 650 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query890
d3bnea1690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.89
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 97.7
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 97.24
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 93.71
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 93.26
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=0  Score=1811.97  Aligned_cols=682  Identities=45%  Similarity=0.841  Sum_probs=659.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf             6789985669989999996418998765446737531234789997422-345556899-88988774478999998999
Q 002706          199 LPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADP  276 (890)
Q Consensus       199 Lp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdyd~yndlG~Pd~~-~~~rpvlgg-~~~pyPRR~rtgr~~~~~dp  276 (890)
                      ||++||++|+++||+||++|||||+||||+||||||||||||||+||++ +++|||||| ++|||||||||||+||++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             97426477999999999980799987787621146420015588988897868998889998999998878989988998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHC--CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             9887667885697876671000220010267766445677998730--38999999787998720597799888771234
Q 002706          277 ASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILI--DKDLGFSSLSDIDKVFNEGIELPPELKDQPLW  354 (890)
Q Consensus       277 ~~e~~~~~~yvPrDe~F~~~K~~~f~~~~~~~~~~~~~p~l~~~~~--~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~  354 (890)
                      .+|+|...+||||||+|+++|+++|+++++|+++|.++|.++++++  .+.++|++|+||++||++|+++| ..   .+.
T Consensus        81 ~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~-~~---~~~  156 (690)
T d3bnea1          81 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-RD---VIS  156 (690)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECC-HH---HHH
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-HH---HHH
T ss_conf             86567888877998886602688999999999999877878777731468889998999999986045570-24---543


Q ss_pred             HHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             545-4555743035885211237851332242364021999989960899412000346998999997777999987738
Q 002706          355 QKI-LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITT  433 (890)
Q Consensus       355 ~~~-~~~~~~~~~~~~~~~l~~p~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~  433 (890)
                      +.+ ++.+.+.++++++++||||+|+++++|+++|++|+|||||+|||+||++||||++||++|+||+++||+++++||+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~it~  236 (690)
T d3bnea1         157 TIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITA  236 (690)
T ss_dssp             HHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCCCCG
T ss_pred             HCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCHHHHHHHHHCCCCCHHEEECCCCCCCCCCCHHHHCCHHHHHHH
T ss_conf             02658999998614666404369831312354211267999999863789554154454687577897770751345667


Q ss_pred             HHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEEEECCCCCCCC--CC
Q ss_conf             9999761795539999747958896055323543355657899300013216854799953458998317999999--99
Q 002706          434 ELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGK--PQ  511 (890)
Q Consensus       434 e~i~~~l~g~~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~p~~~~~--~~  511 (890)
                      ++++  ++| +||++||++|||||+||||+++|++.++|..++++.|||+||||++++|+|+||||||++++..++  ++
T Consensus       237 ~~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~~~  313 (690)
T d3bnea1         237 DSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAA  313 (690)
T ss_dssp             GGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCCCC
T ss_pred             HHHC--CCC-CHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCCEEECCHHHEEECCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             6504--575-1799999729989994445416421236676774434020010578789765078883578987666787


Q ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHH
Q ss_conf             86145179999993478999999862000124566642013210458999871237975704260510135453317999
Q 002706          512 WKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKA  591 (890)
Q Consensus       512 ~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lA  591 (890)
                      +++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||||||+||||.+|||||||.||||+||+||++|
T Consensus       314 ~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~A  393 (690)
T d3bnea1         314 VSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALA  393 (690)
T ss_dssp             CCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHH
T ss_pred             CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHH
T ss_conf             78505899887664389999999997457788888754333567889999987048865777886204553257888999


Q ss_pred             HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             76155799711101367456999999997105678866774578855998789999876434555797731138999999
Q 002706          592 RLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDAL  671 (890)
Q Consensus       592 R~~LI~~gGiie~~f~~G~~~~elss~~y~~~w~F~~~~LP~DL~~RGva~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI  671 (890)
                      |++|||+||++|++|++|+++|+|++++|++ |+|++++||+||++|||+++|+++|||++|+|||||||||||+||+||
T Consensus       394 R~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW~AI  472 (690)
T d3bnea1         394 RQSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAI  472 (690)
T ss_dssp             HHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCEEEECCCCCHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9852088871210036741499999999833-756556787999975897523456444335677886266599999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEC
Q ss_conf             99897515312244425358888999999996205688889999999899567999884430003432100034552002
Q 002706          672 KQWVTEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYG  751 (890)
Q Consensus       672 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~  751 (890)
                      ++||++||++||++|++|++|.|||+||+|++++||+|+++.+|||+|+|+++||++||+|||+||+||||||||||+|+
T Consensus       473 ~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~  552 (690)
T d3bnea1         473 KTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYG  552 (690)
T ss_dssp             HHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
T ss_conf             99999975511698412346799999999986156887778999977788999999999778643178764412533335


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             11699856579999999999046765204967789720999588999999999622899997644677899999947899
Q 002706          752 GYFPNRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIK  831 (890)
Q Consensus       752 gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~  831 (890)
                      ||+||+|++||++||++  |.+++++++.++++++|++||++.||+.+|+++++||.|++||+|||+|+++.|++|++++
T Consensus       553 gfvPN~P~~~r~~~P~~--~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~~  630 (690)
T d3bnea1         553 GLIMNRPTASRRLLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKAL  630 (690)
T ss_dssp             SSTTTSCCCBCCCCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHH
T ss_pred             CCCCCCCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             70789986763789999--8703666641408789886773899999999999964388875457777875554676899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             999999999999999886413872111-36788657720004699999986887753249
Q 002706          832 AAFEKFNRKMQELEGIIDDRNSNENLR-NRTGAGIVPYELLKPFSGPGATGKGVPYSISI  890 (890)
Q Consensus       832 ~a~~~F~~~L~~Ie~~I~~RN~~~~~k-nR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  890 (890)
                      +|+++|+++|++||+.|++||+++++| ||+||+++||+||+|+++||||||||||||||
T Consensus       631 ~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI  690 (690)
T d3bnea1         631 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI  690 (690)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999999999999999982786434445788788845618898788676878870459
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure