Citrus Sinensis ID: 002711

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------89
MDIQDYKDDSLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccEEEECccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccccccccccccHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHcccccccHHcccccHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccEEEEEEcccEEEHHHHHHHHHHHcccEEEEEEEEEEEcccEEEEEEEcccccccccccEEEEEEEccccccccCEEEccccccccEEEEEEEccccHHHHHHHHHHcccccccccccccccccccccccccccEEEECccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHccccEEEEEECccHHHHHHHHHHHHHHccccccEEEEECccc
****************************************************ECYVEITLDVRDDSVSV*****************************************************KSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS********SRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQP*****SGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQ*********************FATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF
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MDIQDYKDDSLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Respiratory burst oxidase homolog protein B Calcium-dependent NADPH oxidase that generates superoxide.confidentQ9SBI0
Respiratory burst oxidase homolog protein B Calcium-dependent NADPH oxidase that generates superoxide. Involved in the massive phase II oxidative burst induced by pathogen infection.probableQ948T9
Respiratory burst oxidase homolog protein B Calcium-dependent NADPH oxidase that generates superoxide.probableQ5ZAJ0

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3A8R, chain A
Confidence level:very confident
Coverage over the Query: 122-287
View the alignment between query and template
View the model in PyMOL
Template: 3A1F, chain A
Confidence level:confident
Coverage over the Query: 684-730,749-796,828-889
View the alignment between query and template
View the model in PyMOL
Template: 2QDX, chain A
Confidence level:probable
Coverage over the Query: 573-651,667-671,683-773
View the alignment between query and template
View the model in PyMOL
Template: 2EHB, chain A
Confidence level:probable
Coverage over the Query: 106-134,150-277
View the alignment between query and template
View the model in PyMOL
Template: 1KRH, chain A
Confidence level:probable
Coverage over the Query: 550-651,669-723
View the alignment between query and template
View the model in PyMOL