Citrus Sinensis ID: 002711
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | 2.2.26 [Sep-21-2011] | |||||||
| Q948T9 | 867 | Respiratory burst oxidase | N/A | no | 0.973 | 0.997 | 0.778 | 0.0 | |
| Q9SBI0 | 843 | Respiratory burst oxidase | yes | no | 0.926 | 0.977 | 0.705 | 0.0 | |
| Q2HXL0 | 938 | Respiratory burst oxidase | N/A | no | 0.979 | 0.928 | 0.633 | 0.0 | |
| Q5ZAJ0 | 905 | Respiratory burst oxidase | yes | no | 0.960 | 0.943 | 0.659 | 0.0 | |
| Q6J2K5 | 905 | Respiratory burst oxidase | N/A | no | 0.960 | 0.943 | 0.659 | 0.0 | |
| Q9FIJ0 | 921 | Respiratory burst oxidase | no | no | 0.968 | 0.934 | 0.630 | 0.0 | |
| O81210 | 905 | Respiratory burst oxidase | no | no | 0.978 | 0.961 | 0.623 | 0.0 | |
| Q2HXK9 | 858 | Respiratory burst oxidase | N/A | no | 0.932 | 0.966 | 0.619 | 0.0 | |
| O81209 | 902 | Respiratory burst oxidase | no | no | 0.939 | 0.925 | 0.591 | 0.0 | |
| Q9SW17 | 849 | Putative respiratory burs | no | no | 0.870 | 0.911 | 0.602 | 0.0 |
| >sp|Q948T9|RBOHB_SOLTU Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1470 bits (3805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/891 (77%), Positives = 784/891 (87%), Gaps = 26/891 (2%)
Query: 1 MDIQDYKDDSLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEITL 60
M+I++ +D + S SRVG+SG L S +KSARFKD DE YVEITL
Sbjct: 1 MEIENTRD-----SDSMRGSRVGFSGSLV-----------SGKKSARFKD-DESYVEITL 43
Query: 61 DVRDDSVSVQNIRGGDSETAFLASRLERKPSSS--SALSARLRQVSQELKRMASSKRFDK 118
DVRDDSVSVQNI+G D E A LASRLE++P+++ S LS LRQVS+ELKRM SS +F K
Sbjct: 44 DVRDDSVSVQNIKGADHEAALLASRLEKRPNNTLGSQLSFHLRQVSKELKRMTSSNKFQK 103
Query: 119 VDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDF 178
+DR+KSGAARAL+GL+F+ KNVGTEGW EVE RFD+LAV+GML KS FGQCIGM ES +F
Sbjct: 104 IDRSKSGAARALRGLQFMNKNVGTEGWSEVESRFDQLAVNGMLTKSLFGQCIGMKESSEF 163
Query: 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEV 238
A ELFDALAR+R +TS ++TK ELR FWEQITD SFDARL+TFFDMVDK+ DGRIT+EEV
Sbjct: 164 AEELFDALARKRCITSPAVTKDELREFWEQITDTSFDARLQTFFDMVDKDADGRITQEEV 223
Query: 239 KEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLT 298
KEII+LSASANKLSKIQ+ +EYAALIMEELDP N+GYIELYNLE LLLQAPS S NL T
Sbjct: 224 KEIISLSASANKLSKIQDNSDEYAALIMEELDPGNVGYIELYNLETLLLQAPSHSMNLST 283
Query: 299 DSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQ 358
+SRVLS+MLSQ+L PTK+RNP K+C R L YF++DNWKRIWVM LWLSICAGLFTWKFIQ
Sbjct: 284 NSRVLSRMLSQKLKPTKERNPFKRCKRRLDYFIEDNWKRIWVMALWLSICAGLFTWKFIQ 343
Query: 359 YKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNIN 418
YK RAVF VMGYCV+ AKG AET KFNMAL+LLPVCRNTITWLRSRTKLG+++PFDDNIN
Sbjct: 344 YKRRAVFDVMGYCVSVAKGGAETTKFNMALVLLPVCRNTITWLRSRTKLGKIIPFDDNIN 403
Query: 419 FHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEG 478
FHKVIA GIA+GVGLHA +HLTCDFPRLLHATDEEYEPMKPFFGD+RP++YWWFVKGTEG
Sbjct: 404 FHKVIAFGIAVGVGLHAISHLTCDFPRLLHATDEEYEPMKPFFGDERPNNYWWFVKGTEG 463
Query: 479 WTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGY 538
WTGVVMVVLM I+Y LAQPWFRRNRLNLP +KKLTGFNAFWYSHHLFVIVYVLFIIHGY
Sbjct: 464 WTGVVMVVLMIIAYVLAQPWFRRNRLNLPSTIKKLTGFNAFWYSHHLFVIVYVLFIIHGY 523
Query: 539 FLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKP 598
FLYLSKKWYK+TTWMY+AVP++LYACERL+RAFRSGYK+V+ILKVAVYPGNV+A+ MSKP
Sbjct: 524 FLYLSKKWYKKTTWMYIAVPMILYACERLLRAFRSGYKAVKILKVAVYPGNVMAVHMSKP 583
Query: 599 QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQ 658
QGFKYTSGQYIFVNC+ VS FQWHPF+I+SAPGDDYLS+HIRTLGDWTSQLK++F+KVC+
Sbjct: 584 QGFKYTSGQYIFVNCSDVSSFQWHPFTISSAPGDDYLSMHIRTLGDWTSQLKTLFSKVCE 643
Query: 659 PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISI 718
PP+ DQSGLLRAD+ +AD +PR+PKLLIDGPYGAPAQDYK YDV+LLVGLGIGATPLISI
Sbjct: 644 PPTGDQSGLLRADVAKADYKPRLPKLLIDGPYGAPAQDYKKYDVVLLVGLGIGATPLISI 703
Query: 719 IKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778
+KDVLNNIKQQK IE+G TK SK+ PFATKRAYFYWVTREQGSFEWF+GVM+EV
Sbjct: 704 VKDVLNNIKQQKNIEDG-------TKGSKRSPFATKRAYFYWVTREQGSFEWFKGVMDEV 756
Query: 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWR 838
+E DQ+G+IELHNYCTSVYEEGDARSALITMLQSI AK+G+DIVSGTRVKTHFARPNWR
Sbjct: 757 SENDQEGLIELHNYCTSVYEEGDARSALITMLQSIQQAKSGVDIVSGTRVKTHFARPNWR 816
Query: 839 TVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
VFK V + H D+R+GVFYCG GL GELR LSQDFS KT TKF+FHKENF
Sbjct: 817 QVFKRVTINHPDQRIGVFYCGPQGLVGELRHLSQDFSHKTGTKFEFHKENF 867
|
Calcium-dependent NADPH oxidase that generates superoxide. Involved in the massive phase II oxidative burst induced by pathogen infection. Solanum tuberosum (taxid: 4113) EC: 1EC: .EC: 6EC: .EC: 3EC: .EC: - |
| >sp|Q9SBI0|RBOHB_ARATH Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/860 (70%), Positives = 704/860 (81%), Gaps = 36/860 (4%)
Query: 36 TNKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSA 95
TNK + + + + DE YVEITL+VRD++++ ++ K + S
Sbjct: 14 TNKISRCKATGS-DNPDEDYVEITLEVRDETINT----------------MKAKATLRSV 56
Query: 96 LSARLRQVSQELKRMASSKRFDKVDRTKS-GAARALKGLKFITKN--VGTEGWGEVEKRF 152
LS RL+ + + L +S+R +DR+KS GA AL+GL+FI KN VG GW EV RF
Sbjct: 57 LSGRLKTMVKSLS--FASRR---LDRSKSFGAMFALRGLRFIAKNDAVG-RGWDEVAMRF 110
Query: 153 DELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ 212
D+LAV+G LPKS FG CIGM ES +F +ELF+AL RRRG TSSSITK+EL FWEQIT
Sbjct: 111 DKLAVEGKLPKSKFGHCIGMVESSEFVNELFEALVRRRGTTSSSITKTELFEFWEQITGN 170
Query: 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH 272
SFD RL+ FFDMVDKNLDGRIT +EVKEIIALSASANKLSKI+E V+EYAALIMEELD
Sbjct: 171 SFDDRLQIFFDMVDKNLDGRITGDEVKEIIALSASANKLSKIKENVDEYAALIMEELDRD 230
Query: 273 NLGYIELYNLEMLLLQAPSQSANLL--TDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYF 330
NLGYIEL+NLE LLLQ PSQS N + R L++MLSQ+L+PTKDRNP+K+ +SYF
Sbjct: 231 NLGYIELHNLETLLLQVPSQSNNSPSSANKRALNKMLSQKLIPTKDRNPVKRFAMNISYF 290
Query: 331 VQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALIL 390
+NWKRIWV+ LW+SIC LFTWKF+QYK + VF VMGYCVT AKG+AETLKFNMALIL
Sbjct: 291 FLENWKRIWVLTLWISICITLFTWKFLQYKRKTVFEVMGYCVTVAKGSAETLKFNMALIL 350
Query: 391 LPVCRNTITWLRSRTKL-GQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHA 449
LPVCRNTITWLR+++KL G VVPFDDNINFHKV+A GIA+G+GLHA +HL CDFPRLLHA
Sbjct: 351 LPVCRNTITWLRTKSKLIGSVVPFDDNINFHKVVAFGIAVGIGLHAISHLACDFPRLLHA 410
Query: 450 TDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKI 509
+ E+EPMK FFGD+RP++Y WF+KGT+GWTGV MVVLM ++Y LAQ WFRRNR NLPK
Sbjct: 411 KNVEFEPMKKFFGDERPENYGWFMKGTDGWTGVTMVVLMLVAYVLAQSWFRRNRANLPKS 470
Query: 510 LKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIR 569
LK+LTGFNAFWYSHHLFVIVYVL I+HGYF+YLSK+WY +TTWMYLAVPVLLYA ERLIR
Sbjct: 471 LKRLTGFNAFWYSHHLFVIVYVLLIVHGYFVYLSKEWYHKTTWMYLAVPVLLYAFERLIR 530
Query: 570 AFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSA 629
AFR G K+V++LKVAVYPGNVL+L MSKP+GFKYTSGQYI++NC+ VS QWHPFSITSA
Sbjct: 531 AFRPGAKAVKVLKVAVYPGNVLSLYMSKPKGFKYTSGQYIYINCSDVSPLQWHPFSITSA 590
Query: 630 PGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGP 689
GDDYLS+HIRTLGDWTSQLKS+++KVCQ PS QSGL ADIGQA+N R P+LLIDGP
Sbjct: 591 SGDDYLSVHIRTLGDWTSQLKSLYSKVCQLPSTSQSGLFIADIGQANNITRFPRLLIDGP 650
Query: 690 YGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKK 749
YGAPAQDY++YDVLLLVGLGIGATPLISII+DVLNNIK Q IE G T K
Sbjct: 651 YGAPAQDYRNYDVLLLVGLGIGATPLISIIRDVLNNIKNQNSIERG-------TNQHIKN 703
Query: 750 PFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITM 809
ATKRAYFYWVTREQGS EWF VMNEVAEYD +G+IELHNYCTSVYEEGDARSALITM
Sbjct: 704 YVATKRAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALITM 763
Query: 810 LQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRR 869
LQS+HHAK+G+DIVSGTRV+THFARPNWR+VFKHVAV H ++RVGVFYCG + GEL+R
Sbjct: 764 LQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGELKR 823
Query: 870 LSQDFSRKTTTKFDFHKENF 889
L+QDFSRKTTTKF+FHKENF
Sbjct: 824 LAQDFSRKTTTKFEFHKENF 843
|
Calcium-dependent NADPH oxidase that generates superoxide. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q2HXL0|RBOHC_SOLTU Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1225 bits (3170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/930 (63%), Positives = 724/930 (77%), Gaps = 59/930 (6%)
Query: 12 SETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARF----------------KDQDECY 55
S+T + R YSGPLSGPL K +KSARF K D+ Y
Sbjct: 16 SDTEIIGNDRASYSGPLSGPL-----NKRGGKKSARFNIPESTDIGTSAGAGAKSNDDAY 70
Query: 56 VEITLDVRDDSVSVQNIR--GG----DSETAFLASRLERKPSSSSAL----SARLRQVSQ 105
VEITLDVR+DSV+V +++ GG D E A LA LE+K + ++L S+R+RQVSQ
Sbjct: 71 VEITLDVREDSVAVHSVKTAGGADVEDPELALLAKGLEKKSTLGASLVRNASSRIRQVSQ 130
Query: 106 ELKRMAS-SKR---FDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAV--DG 159
ELKR+AS +KR + DR KS AA ALKGLKFI+K G GW VEKRFDE+ G
Sbjct: 131 ELKRLASLNKRPIPTGRFDRNKSAAAHALKGLKFISKTDGGAGWAAVEKRFDEITAPTTG 190
Query: 160 MLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARL 218
+LP++ FG+CIGMN ESK+FA EL+DALARRR +T+ SI K++L+ FW+Q+ DQSFD RL
Sbjct: 191 LLPRAKFGECIGMNKESKEFAGELYDALARRRNITTDSINKAQLKEFWDQVADQSFDTRL 250
Query: 219 ETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIE 278
+TFFDMVDK+ DGRITEEEV+EII LSASAN+LS IQ++ +EYAA+IMEELDP+NLGYI
Sbjct: 251 QTFFDMVDKDADGRITEEEVREIIGLSASANRLSTIQKQSDEYAAMIMEELDPNNLGYIM 310
Query: 279 LYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRI 338
+ NLEMLLLQAP+QS +SR LSQMLSQ+L T++ NP+ + + YF+ DNW+R+
Sbjct: 311 IENLEMLLLQAPNQSVQRGGESRNLSQMLSQKLKHTQEPNPLVRWYKSFMYFLLDNWQRV 370
Query: 339 WVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTI 398
WV+LLW+ I A LFTWK+IQYK +A + VMG CV AKGAAET+K NMA+ILLPVCRNTI
Sbjct: 371 WVLLLWIGIMAVLFTWKYIQYKQKAAYDVMGPCVCLAKGAAETIKLNMAIILLPVCRNTI 430
Query: 399 TWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMK 458
TWLR++T+LG VPFDDN+NFHKVIAV IA+GV +H AHLTCDFP+LL+A++E YEPM
Sbjct: 431 TWLRNKTRLGSAVPFDDNLNFHKVIAVAIALGVAIHGLAHLTCDFPKLLNASEEAYEPMI 490
Query: 459 PFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNA 518
+FG+ +P+ YWWFV+G EG TG++MVVLMAI++TLA PWFRR R++ PK KLTGFNA
Sbjct: 491 YYFGE-QPESYWWFVRGVEGVTGIIMVVLMAIAFTLATPWFRRGRVSFPKPFHKLTGFNA 549
Query: 519 FWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSV 578
FWYSHHLF+IVY L I+HG LY++K WYKR+TWMYL VP++LYA ERL+RAFRS K+V
Sbjct: 550 FWYSHHLFIIVYTLLIVHGEKLYITKDWYKRSTWMYLTVPLVLYAGERLLRAFRSSIKAV 609
Query: 579 RILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIH 638
+ILKVAVYPGNVLAL MSKPQG+KY SGQY+FVNCAAVS F+WHPFSITSAPGDD+LS+H
Sbjct: 610 KILKVAVYPGNVLALHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDHLSVH 669
Query: 639 IRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYK 698
IRTLGDWT QLK++F++VCQPP +SGLLRAD Q +N P P++LIDGPYGAPAQDYK
Sbjct: 670 IRTLGDWTRQLKTVFSEVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGPYGAPAQDYK 729
Query: 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKP-------- 750
Y+V+LLVGLGIGATP+ISI+KD++NN+K E EE E+G N+ +
Sbjct: 730 QYEVVLLVGLGIGATPMISIVKDIVNNMKAMDE-EENSLENGNGMSNAAQNASPNMAQKR 788
Query: 751 -----------FATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEE 799
F T+RAYFYWVTREQGSF+WF+G+MNE AE D GVIE+HNYCTSVYEE
Sbjct: 789 GKSSSASGGNSFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHNYCTSVYEE 848
Query: 800 GDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCG 859
GDARSALITMLQS+HHAK+G+DIVSGTRVK+HFA+PNWR V+K +A+ H + +VGVFYCG
Sbjct: 849 GDARSALITMLQSLHHAKSGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKVGVFYCG 908
Query: 860 APGLTGELRRLSQDFSRKTTTKFDFHKENF 889
AP LT EL++ + +FS KT+TKFDFHKENF
Sbjct: 909 APALTKELKQHALNFSHKTSTKFDFHKENF 938
|
Calcium-dependent NADPH oxidase that generates superoxide. May be responsible for the oxidative burst in response to pathogen attack in the leaves. Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q5ZAJ0|RBOHB_ORYSJ Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. japonica GN=RBOHB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/885 (65%), Positives = 709/885 (80%), Gaps = 31/885 (3%)
Query: 27 PLSGPLVTTTNKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIRGGDSE-----TAF 81
P SG L ++ N S K+ARFKD DE VEITLDV+ DSV++Q +RG D T F
Sbjct: 30 PNSGNLGSS----NRSTKTARFKDDDEL-VEITLDVQRDSVAIQEVRGVDEGGSGHGTGF 84
Query: 82 LASRLERKPSSSSALSARLRQVSQELKRMASSKRF-------------DKVDRTKSGAAR 128
L S S L+++LRQV+ LK +SS++ ++DRTKS AA
Sbjct: 85 DGLPLVSPSSKSGKLTSKLRQVTNGLKMKSSSRKAPSPQAQQSAKRVRKRLDRTKSSAAV 144
Query: 129 ALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALAR 188
ALKGL+F+T VG +GW VEKRF++L VDG+L +S FG+CIGM+ S +FA ++FD+LAR
Sbjct: 145 ALKGLQFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCIGMDGSDEFAVQMFDSLAR 204
Query: 189 RRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASA 248
+RG+ +TK EL+ F+EQ+TDQ FD RL TFFDMVDKN DGR+T EEVKEIIALSASA
Sbjct: 205 KRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA 264
Query: 249 NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSA--NLLTDSRVLSQM 306
NKLSKI+ER +EY ALIMEELDP NLGYIE+ +LE LLLQ+PS++A + T S LS+
Sbjct: 265 NKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAARSTTTHSSKLSKA 324
Query: 307 LSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFH 366
LS +L K+ +P++ + YF+++NWKR WVM LW+SIC LF WKFIQY++RAVF
Sbjct: 325 LSMKLASNKEMSPVRHYWQQFMYFLEENWKRSWVMTLWISICIALFIWKFIQYRNRAVFG 384
Query: 367 VMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVG 426
+MGYCVTTAKGAAETLKFNMAL+LLPVCRNTITW+RS+T++G VVPF+DNINFHKVIA G
Sbjct: 385 IMGYCVTTAKGAAETLKFNMALVLLPVCRNTITWIRSKTQVGAVVPFNDNINFHKVIAAG 444
Query: 427 IAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVV 486
+A+GV LHAGAHLTCDFPRLLHA+D +YE MKPFFG+ RP +YWWFVKGTEGWTGVVMVV
Sbjct: 445 VAVGVALHAGAHLTCDFPRLLHASDAQYELMKPFFGEKRPPNYWWFVKGTEGWTGVVMVV 504
Query: 487 LMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKW 546
LMAI++TLAQPWFRRN+L LKK+TGFNAFW++HHLFVIVY L +HG LYLS+KW
Sbjct: 505 LMAIAFTLAQPWFRRNKLKDSNPLKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKW 564
Query: 547 YKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSG 606
YK+TTWMYLAVPV+LY ER++R FRS + +V I KVAVYPGNVLAL MSKP GF+Y SG
Sbjct: 565 YKKTTWMYLAVPVVLYVSERILRLFRS-HDAVGIQKVAVYPGNVLALYMSKPPGFRYRSG 623
Query: 607 QYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSG 666
QYIF+ C AVS ++WHPFSITSAPGDDYLS+HIRT GDWTS+L+++F++ C+PP+ +SG
Sbjct: 624 QYIFIKCTAVSPYEWHPFSITSAPGDDYLSVHIRTRGDWTSRLRTVFSEACRPPTEGESG 683
Query: 667 LLRADI--GQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLN 724
LLRAD+ G D + R PKLL+DGPYGAPAQDY++YDVLLL+GLGIGATPLISI+KDVLN
Sbjct: 684 LLRADLSKGITDEKARFPKLLVDGPYGAPAQDYREYDVLLLIGLGIGATPLISIVKDVLN 743
Query: 725 NIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQD 784
+I Q E G TE ++K +KKKPF TKRAYFYWVTRE+GSFEWFRGVMNEV+E D+D
Sbjct: 744 HI--QGEGSVGTTEPESSSK-AKKKPFMTKRAYFYWVTREEGSFEWFRGVMNEVSEKDKD 800
Query: 785 GVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHV 844
GVIELHN+C+SVY+EGDARSALI MLQ + HAK G+DI+SGT VKTHFARPNWR+VFK V
Sbjct: 801 GVIELHNHCSSVYQEGDARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKKV 860
Query: 845 AVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
AV H ++RVGVFYCG P L +LR+LS DF+ KT T+FDFHKENF
Sbjct: 861 AVSHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNTRFDFHKENF 905
|
Calcium-dependent NADPH oxidase that generates superoxide. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q6J2K5|RBOHB_ORYSI Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. indica GN=RBOHB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1219 bits (3155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/885 (65%), Positives = 709/885 (80%), Gaps = 31/885 (3%)
Query: 27 PLSGPLVTTTNKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIRGGDSE-----TAF 81
P SG L ++ N S K+ARFKD DE VEITLDV+ DSV++Q +RG D T F
Sbjct: 30 PNSGNLGSS----NRSTKTARFKDDDEL-VEITLDVQRDSVAIQEVRGVDEGGSGHGTGF 84
Query: 82 LASRLERKPSSSSALSARLRQVSQELKRMASSKRF-------------DKVDRTKSGAAR 128
L S S L+++LRQV+ LK +SS++ ++DRTKS AA
Sbjct: 85 DGLPLVSPSSKSGKLTSKLRQVTNGLKMKSSSRKAPSPQAQQSAKRVRKRLDRTKSSAAV 144
Query: 129 ALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALAR 188
ALKGL+F+T VG +GW VEKRF++L VDG+L +S FG+CIGM+ S +FA ++FD+LAR
Sbjct: 145 ALKGLQFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCIGMDGSDEFAVQMFDSLAR 204
Query: 189 RRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASA 248
+RG+ +TK EL+ F+EQ+TDQ FD RL TFFDMVDKN DGR+T EEVKEIIALSASA
Sbjct: 205 KRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA 264
Query: 249 NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSA--NLLTDSRVLSQM 306
NKLSKI+ER +EY ALIMEELDP NLGYIE+ +LE LLLQ+PS++A + T S LS+
Sbjct: 265 NKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAARSTTTHSSKLSKA 324
Query: 307 LSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFH 366
LS +L K+ +P++ + YF+++NWKR WVM LW+SIC LF WKFIQY++RAVF
Sbjct: 325 LSMKLASNKEMSPVRHYWQQFMYFLEENWKRSWVMTLWISICIALFIWKFIQYRNRAVFG 384
Query: 367 VMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVG 426
+MGYCVTTAKGAAETLKFNMAL+LLPVCRNTITW+RS+T++G VVPF+DNINFHKVIA G
Sbjct: 385 IMGYCVTTAKGAAETLKFNMALVLLPVCRNTITWIRSKTQVGAVVPFNDNINFHKVIAAG 444
Query: 427 IAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVV 486
+A+GV LHAGAHLTCDFPRLLHA+D +YE MKPFFG+ RP +YWWFVKGTEGWTGVVMVV
Sbjct: 445 VAVGVALHAGAHLTCDFPRLLHASDAQYELMKPFFGEKRPPNYWWFVKGTEGWTGVVMVV 504
Query: 487 LMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKW 546
LMAI++TLAQPWFRRN+L LKK+TGFNAFW++HHLFVIVY L +HG LYLS+KW
Sbjct: 505 LMAIAFTLAQPWFRRNKLKDSNPLKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKW 564
Query: 547 YKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSG 606
YK+TTWMYLAVPV+LY ER++R FRS + +V I KVAVYPGNVLAL MSKP GF+Y SG
Sbjct: 565 YKKTTWMYLAVPVVLYVSERILRLFRS-HDAVGIQKVAVYPGNVLALYMSKPPGFRYRSG 623
Query: 607 QYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSG 666
QYIF+ C AVS ++WHPFSITSAPGDDYLS+HIRT GDWTS+L+++F++ C+PP+ +SG
Sbjct: 624 QYIFIKCTAVSPYEWHPFSITSAPGDDYLSVHIRTRGDWTSRLRTVFSEACRPPTEGESG 683
Query: 667 LLRADI--GQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLN 724
LLRAD+ G D + R PKLL+DGPYGAPAQDY++YDVLLL+GLGIGATPLISI+KDVLN
Sbjct: 684 LLRADLSKGITDEKARFPKLLVDGPYGAPAQDYREYDVLLLIGLGIGATPLISIVKDVLN 743
Query: 725 NIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQD 784
+I Q E G TE ++K +KKKPF TKRAYFYWVTRE+GSFEWFRGVMNEV+E D+D
Sbjct: 744 HI--QGEGSVGTTEPESSSK-AKKKPFMTKRAYFYWVTREEGSFEWFRGVMNEVSEKDKD 800
Query: 785 GVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHV 844
GVIELHN+C+SVY+EGDARSALI MLQ + HAK G+DI+SGT VKTHFARPNWR+VFK V
Sbjct: 801 GVIELHNHCSSVYQEGDARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKKV 860
Query: 845 AVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
AV H ++RVGVFYCG P L +LR+LS DF+ KT T+FDFHKENF
Sbjct: 861 AVSHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNTRFDFHKENF 905
|
Calcium-dependent NADPH oxidase that generates superoxide. Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9FIJ0|RBOHD_ARATH Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/919 (63%), Positives = 716/919 (77%), Gaps = 58/919 (6%)
Query: 9 DSLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQ--------------DEC 54
D+ S+T S S R +SGPL P K +S+K+ARF D D+
Sbjct: 23 DTNSDTESIASDRGAFSGPLGRP-------KRASKKNARFADDLPKRSNSVAGGRGDDDE 75
Query: 55 YVEITLDVRDDSV---SVQNIRGG-----DSETAFLASR-LERKPSSSSALS------AR 99
YVEITLD+RDDSV SVQ GG D E A L + LE +++++LS +R
Sbjct: 76 YVEITLDIRDDSVAVHSVQQAAGGGGHLEDPELALLTKKTLESSLNNTTSLSFFRSTSSR 135
Query: 100 LRQVSQELKRMAS---SKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELA 156
++ S+EL+R+ S S + DRT S A ALKGLKFI T W V++RFD+L+
Sbjct: 136 IKNASRELRRVFSRRPSPAVRRFDRTSSAAIHALKGLKFIATK--TAAWPAVDQRFDKLS 193
Query: 157 VD--GMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQS 213
D G+L + F +C+GMN ESKDFA +LF ALARR ++ +ITK +LR FWEQI+D+S
Sbjct: 194 ADSNGLLLSAKFWECLGMNKESKDFADQLFRALARRNNVSGDAITKEQLRIFWEQISDES 253
Query: 214 FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHN 273
FDA+L+ FFDMVDK+ DGR+TEEEV EII+LSASANKLS IQ++ +EYAALIMEELDP N
Sbjct: 254 FDAKLQVFFDMVDKDEDGRVTEEEVAEIISLSASANKLSNIQKQAKEYAALIMEELDPDN 313
Query: 274 LGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQD 333
G+I + NLEMLLLQAP+QS + DSR+LSQMLSQ+L P K+ NP+ + + YF+ D
Sbjct: 314 AGFIMIENLEMLLLQAPNQSVRM-GDSRILSQMLSQKLRPAKESNPLVRWSEKIKYFILD 372
Query: 334 NWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPV 393
NW+R+W+M+LWL IC GLFT+KFIQYK++A + VMGYCV AKG AETLKFNMALILLPV
Sbjct: 373 NWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGVMGYCVCVAKGGAETLKFNMALILLPV 432
Query: 394 CRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEE 453
CRNTITWLR++TKLG VVPFDD++NFHKVIA GI +GV LHAGAHLTCDFPRL+ A ++
Sbjct: 433 CRNTITWLRNKTKLGTVVPFDDSLNFHKVIASGIVVGVLLHAGAHLTCDFPRLIAADEDT 492
Query: 454 YEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKL 513
YEPM+ +FGD +P YWWFVKG EGWTG+VMVVLMAI++TLA PWFRRN+LNLP LKKL
Sbjct: 493 YEPMEKYFGD-QPTSYWWFVKGVEGWTGIVMVVLMAIAFTLATPWFRRNKLNLPNFLKKL 551
Query: 514 TGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRS 573
TGFNAFWY+HHLF+IVY L I+HG LYL+K WY++TTWMYLAVP+LLYA ERL+RAFRS
Sbjct: 552 TGFNAFWYTHHLFIIVYALLIVHGIKLYLTKIWYQKTTWMYLAVPILLYASERLLRAFRS 611
Query: 574 GYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD 633
K V+++KVAVYPGNVL+L M+KPQGFKY SGQ++ VNC AVS F+WHPFSITSAPGDD
Sbjct: 612 SIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSPFEWHPFSITSAPGDD 671
Query: 634 YLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693
YLS+HIRTLGDWT +L+++F++VC+PP+ +SGLLRAD G N P PK+LIDGPYGAP
Sbjct: 672 YLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDG-NLP-FPKVLIDGPYGAP 729
Query: 694 AQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK---QQKEIEEGITEDGGATKNSKKKP 750
AQDYK YDV+LLVGLGIGATP+ISI+KD++NN+K + +IE N+ K
Sbjct: 730 AQDYKKYDVVLLVGLGIGATPMISILKDIINNMKGPDRDSDIEN-------NNSNNNSKG 782
Query: 751 FATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITML 810
F T++AYFYWVTREQGSFEWF+G+M+E++E D++G+IELHNYCTSVYEEGDAR ALI ML
Sbjct: 783 FKTRKAYFYWVTREQGSFEWFKGIMDEISELDEEGIIELHNYCTSVYEEGDARVALIAML 842
Query: 811 QSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRL 870
QS+ HAKNG+D+VSGTRVK+HFA+PNWR V+K +AV+H +R+GVFYCG PG+ EL+ L
Sbjct: 843 QSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGMPGMIKELKNL 902
Query: 871 SQDFSRKTTTKFDFHKENF 889
+ DFSRKTTTKFDFHKENF
Sbjct: 903 ALDFSRKTTTKFDFHKENF 921
|
Calcium-dependent NADPH oxidase that generates superoxide. Involved in the generation of reactive oxygen species (ROS) during incompatible interactions with pathogens and in UV-B and abscisic acid ROS-dependent signaling. Might be required for ROS signal amplification during light stress. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O81210|RBOHC_ARATH Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/900 (62%), Positives = 694/900 (77%), Gaps = 30/900 (3%)
Query: 15 GSTTSSRVGYSGPLSGPLVTTTNKK-NSSRKSARFKDQDEC--YVEITLDVRDDSVSVQN 71
G + + G SGP+SG + KK +SR +A + YV++T+DV+DD+VSV +
Sbjct: 11 GYHSDAEAGNSGPMSGGQLPPIYKKPGNSRFTAENSQRTRTAPYVDLTVDVQDDTVSVHS 70
Query: 72 IR--GGDSE------TAFLASRLERKPSSSSALSARLRQVSQELKRMAS---------SK 114
++ GG S T +RLE+K + + RL VS ELKR+ S
Sbjct: 71 LKMEGGSSVEESPELTLLKRNRLEKK----TTVVKRLASVSHELKRLTSVSGGIGGRKPP 126
Query: 115 RFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVD--GMLPKSSFGQCIGM 172
R K+DRTKS A++ALKGLKFI+K G GW VEKRF+++ G+L ++ FG+CIGM
Sbjct: 127 RPAKLDRTKSAASQALKGLKFISKTDGGAGWSAVEKRFNQITATTGGLLLRTKFGECIGM 186
Query: 173 NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGR 232
SKDFA ELFDALARRR +T I +L+ FWEQI DQSFD+RL+TFFDMVDK+ DGR
Sbjct: 187 T-SKDFALELFDALARRRNITGEVIDGDQLKEFWEQINDQSFDSRLKTFFDMVDKDADGR 245
Query: 233 ITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQ 292
+TE+EV+EII+LSASAN LS IQ+R +EYAALIMEELDP N+GYI L +LE LLLQA +Q
Sbjct: 246 LTEDEVREIISLSASANNLSTIQKRADEYAALIMEELDPDNIGYIMLESLETLLLQAATQ 305
Query: 293 SANLLTDSRV-LSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGL 351
S T R LS M+SQRL PT +RNP+K+ RGL +F+ DNW+R WV++LW + A L
Sbjct: 306 SVITSTGERKNLSHMMSQRLKPTFNRNPLKRWYRGLRFFLLDNWQRCWVIVLWFIVMAIL 365
Query: 352 FTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVV 411
FT+K+IQY+ V+ VMG CV AKGAAET+K NMALILLPVCRNTITWLR++T+LG+VV
Sbjct: 366 FTYKYIQYRRSPVYPVMGDCVCMAKGAAETVKLNMALILLPVCRNTITWLRNKTRLGRVV 425
Query: 412 PFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWW 471
PFDDN+NFHKVIAVGI +GV +HAGAHL CDFPRLLHAT E Y P++ FFGD++P YW
Sbjct: 426 PFDDNLNFHKVIAVGIIVGVTMHAGAHLACDFPRLLHATPEAYRPLRQFFGDEQPKSYWH 485
Query: 472 FVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLN-LPKILKKLTGFNAFWYSHHLFVIVY 530
FV EG TG+VMV+LMAI++TLA PWFRR +LN LP LKKL FNAFWY+HHLFVIVY
Sbjct: 486 FVNSVEGITGLVMVLLMAIAFTLATPWFRRGKLNYLPGPLKKLASFNAFWYTHHLFVIVY 545
Query: 531 VLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNV 590
+L + HGY+LYL++ W+ +TTWMYL VPV+LYACERLIRAFRS K+V I KVAVYPGNV
Sbjct: 546 ILLVAHGYYLYLTRDWHNKTTWMYLVVPVVLYACERLIRAFRSSIKAVTIRKVAVYPGNV 605
Query: 591 LALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLK 650
LA+ +S+PQ FKY SGQY+FVNCAAVS F+WHPFSITSAP DDYLS+HIR LGDWT LK
Sbjct: 606 LAIHLSRPQNFKYKSGQYMFVNCAAVSPFEWHPFSITSAPQDDYLSVHIRVLGDWTRALK 665
Query: 651 SIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGI 710
+F++VC+PP SGLLRAD+ N P PK+LIDGPYGAPAQDYK Y+V+LLVGLGI
Sbjct: 666 GVFSEVCKPPPAGVSGLLRADMLHGANNPDFPKVLIDGPYGAPAQDYKKYEVVLLVGLGI 725
Query: 711 GATPLISIIKDVLNNIKQQKEIEEGITEDGGA-TKNSKKKPFATKRAYFYWVTREQGSFE 769
GATP+ISI+KD++NNIK +++ + E+G + + SKK+ F T+RAYFYWVTREQGSF+
Sbjct: 726 GATPMISIVKDIVNNIKAKEQAQLNRMENGTSEPQRSKKESFRTRRAYFYWVTREQGSFD 785
Query: 770 WFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVK 829
WF+ +MNEVAE D + VIE+HNYCTSVYEEGDARSALI MLQS++HAKNG+DIVSGTRV
Sbjct: 786 WFKNIMNEVAERDANRVIEMHNYCTSVYEEGDARSALIHMLQSLNHAKNGVDIVSGTRVM 845
Query: 830 THFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
+HFA+PNWR V+K +A+ H + +VGVFYCGAP LT ELR L+ DF+ KT+T+F FHKENF
Sbjct: 846 SHFAKPNWRNVYKRIAMDHPNTKVGVFYCGAPALTKELRHLALDFTHKTSTRFSFHKENF 905
|
Calcium-dependent NADPH oxidase that generates superoxide. Required for H(2)O(2) production in response to K(+) deficiency and for the generation of reactive oxygen species (ROS) that regulate cell expansion through the activation of Ca(2+) channels. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q2HXK9|RBOHD_SOLTU Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/864 (61%), Positives = 670/864 (77%), Gaps = 35/864 (4%)
Query: 42 SRKSARFKDQDECYVEITLDVRDDSVSVQNIRGG------DSETAFLASRLERKPSSSSA 95
S S K D+ VEITLD+RDD+++ Q+++ ++E L L++K S +
Sbjct: 14 SSPSNTTKSNDDKNVEITLDIRDDTMAGQSVKNATKTKAEEAELEALGKNLQKKCSFGAT 73
Query: 96 LSARLRQVSQELKRMASSKRF----DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKR 151
+ +R VS + R+ S KR DR+ + A ALKG KFI+K G GW V++R
Sbjct: 74 I---VRNVSMRM-RLPSFKRQPHPPQTFDRSSTAAQNALKGFKFISKTDGGSGWDTVQQR 129
Query: 152 FDELAV--DGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQ 208
FDEL D +LP++ FG+CIGMN ES+ FA ELF+ALARRR +TS I+K +L+ FW+Q
Sbjct: 130 FDELTATSDSLLPRAKFGECIGMNRESEGFALELFNALARRRNITSGCISKEQLKEFWDQ 189
Query: 209 ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEE 268
I +QSFD+RL TFFDMVDK+ DGR+TEEEV+EII LSASANKLS IQ++ EYAALIMEE
Sbjct: 190 IANQSFDSRLRTFFDMVDKDADGRLTEEEVREIICLSASANKLSNIQKQAAEYAALIMEE 249
Query: 269 LDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLS 328
LD GYI L NLEMLLL+AP Q +R LS MLS +L PT + NPIK+ L
Sbjct: 250 LDRDQKGYIMLENLEMLLLEAPIQPDGEKGLNRNLSHMLSMKLKPTLETNPIKRWYNNLK 309
Query: 329 YFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMAL 388
YF+ DNW+R+WV+LLW+ + AGLF +K++QYK++A F+VMG+CV AKGAAE LK NMAL
Sbjct: 310 YFLLDNWRRVWVLLLWIGVMAGLFAYKYVQYKNKAAFNVMGHCVCVAKGAAEVLKLNMAL 369
Query: 389 ILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLH 448
ILLPVCRNTITWLR++TKLG VPFDDNINFHKV+A IA+GVG+H AH+TCDFPRLL+
Sbjct: 370 ILLPVCRNTITWLRNKTKLGGAVPFDDNINFHKVVAGAIAVGVGIHVLAHMTCDFPRLLN 429
Query: 449 ATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPK 508
A+ E+Y+PM+P+FG D+P +YW FVKG EG +G++MVVLM+I++TLA FRRN++ LP+
Sbjct: 430 ASPEKYKPMEPYFG-DQPRNYWHFVKGVEGVSGIIMVVLMSIAFTLASQRFRRNKIRLPR 488
Query: 509 ILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLI 568
L KLTGFNAFWYSHHLFVIVY L I+HG LYL+K+WYK+TTWMYLA+P++LY+ ERL+
Sbjct: 489 PLNKLTGFNAFWYSHHLFVIVYSLLIVHGIELYLTKEWYKKTTWMYLAIPIILYSGERLL 548
Query: 569 RAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITS 628
RAFRS K V+ILKVA+Y GNVL LQMSKPQGF Y SGQY+FVNCAAVS F+WHPFSITS
Sbjct: 549 RAFRSSVKDVKILKVAMYTGNVLTLQMSKPQGFNYKSGQYMFVNCAAVSPFEWHPFSITS 608
Query: 629 APGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDG 688
APGD+YLS+HIR +GDWT++L+ +F+ +P +SGL+ AD Q ++ PK+LIDG
Sbjct: 609 APGDEYLSVHIRIVGDWTTKLRDVFS---EPSPTGRSGLV-ADYLQ--DKINYPKVLIDG 662
Query: 689 PYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK---EIEEGITEDGGATKN 745
PYGAPAQDYK+Y+VLLLVGLGIGATP+ISI+KD++NN+K++K ++E+ G +
Sbjct: 663 PYGAPAQDYKEYEVLLLVGLGIGATPMISIVKDIVNNMKEEKYDHDLEKKTVSGSGRSN- 721
Query: 746 SKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSA 805
KR YFYWVTREQGSF+WF+G+MNE+A D DG+IE+HNYCTSVYEEGDARSA
Sbjct: 722 -------FKRVYFYWVTREQGSFDWFKGLMNELAVMDCDGIIEMHNYCTSVYEEGDARSA 774
Query: 806 LITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTG 865
LI MLQSI+HAKNG+DIVSGTRVKTHFARPNWR V+K +A+ HTD RVGVFYCGAP LT
Sbjct: 775 LIAMLQSINHAKNGVDIVSGTRVKTHFARPNWRNVYKRIALNHTDARVGVFYCGAPALTK 834
Query: 866 ELRRLSQDFSRKTTTKFDFHKENF 889
L +L+ DFS KT+TKFDFHKENF
Sbjct: 835 VLGQLALDFSHKTSTKFDFHKENF 858
|
Calcium-dependent NADPH oxidase that generates superoxide. May be responsible for the oxidative burst in response to pathogen attack in the leaves. Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O81209|RBOHA_ARATH Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/878 (59%), Positives = 650/878 (74%), Gaps = 43/878 (4%)
Query: 45 SARFKDQDECYVEITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVS 104
++ + +DE YVEITLD+ DDSVSV ++ + A S E + S R V
Sbjct: 35 TSNYYGEDEPYVEITLDIHDDSVSVYGLKSPNHRGA--GSNYEDQSLLRQGRSGRSNSV- 91
Query: 105 QELKRMASS----------------------KRFDKVDRTKSGAARALKGLKFITKNVGT 142
LKR+ASS + K+ R+KS A ALKGLKFITK G
Sbjct: 92 --LKRLASSVSTGITRVASSVSSSSARKPPRPQLAKLRRSKSRAELALKGLKFITKTDGV 149
Query: 143 EGWGEVEKRF--DELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKS 200
GW EVEKRF + +G+L +S FG+CIGM +S +FA LFDALARR ++ SI +
Sbjct: 150 TGWPEVEKRFYVMTMTTNGLLHRSRFGECIGM-KSTEFALALFDALARRENVSGDSININ 208
Query: 201 ELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEE 260
EL+ FW+QITDQ FD+RL TFF MVDK+ DGR+ E EV+EII LSASAN+L I+ + +E
Sbjct: 209 ELKEFWKQITDQDFDSRLRTFFAMVDKDSDGRLNEAEVREIITLSASANELDNIRRQADE 268
Query: 261 YAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPI 320
YAALIMEELDP++ GYI + NLE+LLLQAP Q + + LS+MLSQ L+ + RN
Sbjct: 269 YAALIMEELDPYHYGYIMIENLEILLLQAPMQDVRD-GEGKKLSKMLSQNLMVPQSRNLG 327
Query: 321 KKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAE 380
+ CRG+ YF+ DNWKR+WVM LW+ AGLFTWKF++Y+ R+ + VMG CV AKGAAE
Sbjct: 328 ARFCRGMKYFLFDNWKRVWVMALWIGAMAGLFTWKFMEYRKRSAYEVMGVCVCIAKGAAE 387
Query: 381 TLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLT 440
TLK NMA+ILLPVCRNTITWLR++TKL +VPFDD++NFHKVIA+GI++GVG+HA +HL
Sbjct: 388 TLKLNMAMILLPVCRNTITWLRTKTKLSAIVPFDDSLNFHKVIAIGISVGVGIHATSHLA 447
Query: 441 CDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFR 500
CDFPRL+ A +++YEPM+ +FG + Y FV+ EG TG+ MVVLM I++TLA WFR
Sbjct: 448 CDFPRLIAADEDQYEPMEKYFGP-QTKRYLDFVQSVEGVTGIGMVVLMTIAFTLATTWFR 506
Query: 501 RNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLS-KKWYKRTTWMYLAVPV 559
RN+LNLP LKK+TGFNAFWYSHHLFVIVY L ++HG+++YL + WYK+TTWMYL VPV
Sbjct: 507 RNKLNLPGPLKKITGFNAFWYSHHLFVIVYSLLVVHGFYVYLIIEPWYKKTTWMYLMVPV 566
Query: 560 LLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQF 619
+LY CERLIRAFRS ++V +LKVAV PGNVL+L +S+P F+Y SGQY+++NC+AVS
Sbjct: 567 VLYLCERLIRAFRSSVEAVSVLKVAVLPGNVLSLHLSRPSNFRYKSGQYMYLNCSAVSTL 626
Query: 620 QWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRP 679
+WHPFSITSAPGDDYLS+HIR LGDWT QL+S+F++VC+P D+ L RAD D P
Sbjct: 627 EWHPFSITSAPGDDYLSVHIRVLGDWTKQLRSLFSEVCKPRPPDEHRLNRADSKHWDYIP 686
Query: 680 RIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK--------QQKE 731
P++LIDGPYGAPAQDYK ++V+LLVGLGIGATP+ISI+ D++NN+K +Q
Sbjct: 687 DFPRILIDGPYGAPAQDYKKFEVVLLVGLGIGATPMISIVSDIINNLKGVEEGSNRRQSP 746
Query: 732 IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHN 791
I +T + + K + F TKRAYFYWVTREQGSF+WF+ VM+EV E D+ VIELHN
Sbjct: 747 IHNMVTPP--VSPSRKSETFRTKRAYFYWVTREQGSFDWFKNVMDEVTETDRKNVIELHN 804
Query: 792 YCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDE 851
YCTSVYEEGDARSALITMLQS++HAK+G+D+VSGTRV +HFARPNWR+VFK +AV H
Sbjct: 805 YCTSVYEEGDARSALITMLQSLNHAKHGVDVVSGTRVMSHFARPNWRSVFKRIAVNHPKT 864
Query: 852 RVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
RVGVFYCGA GL ELR LS DFS KT+TKF FHKENF
Sbjct: 865 RVGVFYCGAAGLVKELRHLSLDFSHKTSTKFIFHKENF 902
|
Calcium-dependent NADPH oxidase that generates superoxide. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9SW17|RBOHG_ARATH Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/790 (60%), Positives = 617/790 (78%), Gaps = 16/790 (2%)
Query: 107 LKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAV--DGMLPKS 164
L ++ + ++DR+KS A +ALKGLK I+K G W VEKR+ ++ DG+L +S
Sbjct: 69 LTMVSGESKAPRLDRSKSTAGQALKGLKIISKTDGNAAWTVVEKRYLKITANTDGLLLRS 128
Query: 165 SFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDM 224
FG+CIGMN SK+FA ELFDALAR+ L IT++EL+ FWEQI D+SFD+RL TFFD+
Sbjct: 129 KFGECIGMN-SKEFALELFDALARKSHLKGDVITETELKKFWEQINDKSFDSRLITFFDL 187
Query: 225 VDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEM 284
+DK+ DGR+TE+EV+EII LS+SAN LS IQ + +EYAA+IMEELDP ++GYI + +L+
Sbjct: 188 MDKDSDGRLTEDEVREIIKLSSSANHLSCIQNKADEYAAMIMEELDPDHMGYIMMESLKK 247
Query: 285 LLLQAPSQSANLLTDS---RVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVM 341
LLLQA ++S + +S + LS ML++ L PT+D N +++ L +FV D+W+R+WV+
Sbjct: 248 LLLQAETKSVSTDINSEERKELSDMLTESLKPTRDPNHLRRWYCQLRFFVLDSWQRVWVI 307
Query: 342 LLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWL 401
LWL+I A LF +K+IQYK+RAV+ V+G CV AKGAAETLK NMALILLPVCRNTITWL
Sbjct: 308 ALWLTIMAILFAYKYIQYKNRAVYEVLGPCVCLAKGAAETLKLNMALILLPVCRNTITWL 367
Query: 402 RSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFF 461
R++T+LG VPFDDN+NFHKVIAVGIAIGV +H+ +HL CDFP L+ AT EY P+ FF
Sbjct: 368 RNKTRLGVFVPFDDNLNFHKVIAVGIAIGVAIHSVSHLACDFPLLIAATPAEYMPLGKFF 427
Query: 462 GDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLN--LPKILKKLTGFNAF 519
G+++P Y FVK TEG TG+VMV LM I++TLA PWFRR +L LP LKKL FNAF
Sbjct: 428 GEEQPKRYLHFVKSTEGITGLVMVFLMVIAFTLAMPWFRRGKLEKKLPGPLKKLASFNAF 487
Query: 520 WYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVR 579
WY+HHLFVIVY+L ++HGY++YL+K+WYK+TTWMYLAVPV LYA ERLIRAFRS ++V+
Sbjct: 488 WYTHHLFVIVYILLVLHGYYIYLNKEWYKKTTWMYLAVPVALYAYERLIRAFRSSIRTVK 547
Query: 580 ILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHI 639
+LK+A YPG VL LQMSKP FKY SGQY+FVNC AVS F+WHPFSITS P DDYLS+HI
Sbjct: 548 VLKMAAYPGKVLTLQMSKPTNFKYMSGQYMFVNCPAVSPFEWHPFSITSTPQDDYLSVHI 607
Query: 640 RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKD 699
+ LGDWT ++ +F++V +PP V D+ N PR PK++IDGPYGAPAQDYK
Sbjct: 608 KALGDWTEAIQGVFSEVSKPPPV-------GDMLNGANSPRFPKIMIDGPYGAPAQDYKK 660
Query: 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFY 759
Y+V+LL+GLGIGATP+ISIIKD++NN + ++++ + + + + K+ F T+RAYFY
Sbjct: 661 YEVVLLIGLGIGATPMISIIKDIINNTETKEQLSQ-MEKGSPQEQQGNKETFKTRRAYFY 719
Query: 760 WVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNG 819
WVT+EQG+F+WF+ +MNE+AE D+ VIELHN+CTSVYEEGD RSALI MLQS+++AKNG
Sbjct: 720 WVTKEQGTFDWFKNIMNEIAERDKSKVIELHNHCTSVYEEGDVRSALIRMLQSLNYAKNG 779
Query: 820 LDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTT 879
LDIV+GTRV +HFARPNW+ V+K +A+ H VGVFYCGAP LT ELR+L+ +F+ KT+
Sbjct: 780 LDIVAGTRVMSHFARPNWKNVYKQIAMDHPGANVGVFYCGAPVLTKELRQLALEFTHKTS 839
Query: 880 TKFDFHKENF 889
T+F FHKENF
Sbjct: 840 TRFSFHKENF 849
|
Calcium-dependent NADPH oxidase that generates superoxide. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | ||||||
| 255542718 | 888 | respiratory burst oxidase, putative [Ric | 0.993 | 0.994 | 0.838 | 0.0 | |
| 356572992 | 887 | PREDICTED: respiratory burst oxidase hom | 0.993 | 0.995 | 0.818 | 0.0 | |
| 224123570 | 876 | predicted protein [Populus trichocarpa] | 0.983 | 0.997 | 0.838 | 0.0 | |
| 356572994 | 886 | PREDICTED: respiratory burst oxidase hom | 0.992 | 0.995 | 0.816 | 0.0 | |
| 356505839 | 885 | PREDICTED: respiratory burst oxidase hom | 0.991 | 0.995 | 0.814 | 0.0 | |
| 356505841 | 877 | PREDICTED: respiratory burst oxidase hom | 0.982 | 0.995 | 0.809 | 0.0 | |
| 357441729 | 885 | Respiratory burst oxidase-like protein [ | 0.992 | 0.996 | 0.810 | 0.0 | |
| 356572996 | 878 | PREDICTED: respiratory burst oxidase hom | 0.983 | 0.995 | 0.804 | 0.0 | |
| 371767603 | 881 | NADPH oxidase [Phaseolus vulgaris] | 0.988 | 0.997 | 0.804 | 0.0 | |
| 449435661 | 889 | PREDICTED: respiratory burst oxidase hom | 0.991 | 0.991 | 0.797 | 0.0 |
| >gi|255542718|ref|XP_002512422.1| respiratory burst oxidase, putative [Ricinus communis] gi|223548383|gb|EEF49874.1| respiratory burst oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1575 bits (4077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/894 (83%), Positives = 823/894 (92%), Gaps = 11/894 (1%)
Query: 1 MDIQD-YKDDSLSETGSTTSSR-VGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEI 58
M+IQ+ ++ ++ SET S +SSR GYSGP+SGPLVT N KNSS+KSARFKD+ YVEI
Sbjct: 1 MEIQEKHQQETWSETESNSSSRRFGYSGPMSGPLVT--NAKNSSKKSARFKDE---YVEI 55
Query: 59 TLDVRDDSVSVQNIRGGDSETAFLASRLERK---PSSSSALSARLRQVSQELKRMASSKR 115
TLDVRDDSVSVQNIRGGDSETA+LAS+LE+K PS S LS RLRQVSQELKRM S+ +
Sbjct: 56 TLDVRDDSVSVQNIRGGDSETAYLASQLEKKKNHPSLGSQLSFRLRQVSQELKRMTSNNK 115
Query: 116 FDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNES 175
FD+VDRTKSGAARALKGLKF++KNVGTEGW EVE RFD+L+VDG LPK+ FGQCIGMNES
Sbjct: 116 FDRVDRTKSGAARALKGLKFMSKNVGTEGWSEVEARFDKLSVDGALPKTKFGQCIGMNES 175
Query: 176 KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITE 235
+FA+ELFDALARRRG+TS+SI+K++L FWEQITD SFDARL+TFFDMVDKN DGRITE
Sbjct: 176 SEFANELFDALARRRGITSASISKAQLHEFWEQITDHSFDARLQTFFDMVDKNADGRITE 235
Query: 236 EEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSAN 295
EEVKEIIALSASANKLSKIQER EEYAALIMEELDP NLG++ELYNLEMLLLQAP+QS N
Sbjct: 236 EEVKEIIALSASANKLSKIQERAEEYAALIMEELDPDNLGFVELYNLEMLLLQAPNQSTN 295
Query: 296 LLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWK 355
L TDSR+LSQ+LSQ+LVPTK+ NPIK+ + L+YFV+DNWKRIWVM LWL ICAGLFTWK
Sbjct: 296 LATDSRILSQILSQKLVPTKEHNPIKRWYKKLAYFVEDNWKRIWVMALWLGICAGLFTWK 355
Query: 356 FIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDD 415
FIQYKHRAVF VMGYCVTTAKGAAET KFNMALILLPVCRNTITWLRS+TKLG VVPFDD
Sbjct: 356 FIQYKHRAVFDVMGYCVTTAKGAAETTKFNMALILLPVCRNTITWLRSKTKLGMVVPFDD 415
Query: 416 NINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKG 475
NINFHKVIA GIAIGVGLHAGAHLTCDFPRLLHATDEEYEPM+PFFG++RPD+YWWFVKG
Sbjct: 416 NINFHKVIAFGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMEPFFGEERPDNYWWFVKG 475
Query: 476 TEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFII 535
TEGWTGVVMVVLM I+Y LAQPWFRRNRLNLPK LKKLTGFNAFWYSHHLFVIVY LFI+
Sbjct: 476 TEGWTGVVMVVLMIIAYILAQPWFRRNRLNLPKTLKKLTGFNAFWYSHHLFVIVYALFIV 535
Query: 536 HGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQM 595
HGY+LYLSK WYK+TTWMYLAVP+ LYA ERLIRAFRSGYKSV+ILKVAVYPGNVLAL M
Sbjct: 536 HGYYLYLSKDWYKKTTWMYLAVPMGLYAIERLIRAFRSGYKSVKILKVAVYPGNVLALHM 595
Query: 596 SKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAK 655
SKPQGF+YTSGQYIFVNC+AVS FQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKS+F+K
Sbjct: 596 SKPQGFRYTSGQYIFVNCSAVSPFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSVFSK 655
Query: 656 VCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPL 715
VCQP S +QSGLLRAD+ ++ N+PR+PKLLIDGPYGAPAQDYK YDVLLLVGLGIGATPL
Sbjct: 656 VCQPASSNQSGLLRADVEKSGNKPRLPKLLIDGPYGAPAQDYKKYDVLLLVGLGIGATPL 715
Query: 716 ISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVM 775
ISI+KDVLNNIKQQKE EEGI E+ G K SK+KPFAT+RAYFYWVTREQGSFEWF+GVM
Sbjct: 716 ISIVKDVLNNIKQQKEKEEGIVEN-GINKGSKRKPFATRRAYFYWVTREQGSFEWFKGVM 774
Query: 776 NEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARP 835
NEVAEYDQD VIELHNYCTSVYEEGDARSALITMLQSI HAKNG+DIVS TRV+THFARP
Sbjct: 775 NEVAEYDQDKVIELHNYCTSVYEEGDARSALITMLQSIQHAKNGVDIVSETRVRTHFARP 834
Query: 836 NWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
NWR VFKHVA+ + D+RVGVFYCGAPGLTGELRRL+QDFSRKT+TKFDFHKENF
Sbjct: 835 NWRKVFKHVAINYPDQRVGVFYCGAPGLTGELRRLAQDFSRKTSTKFDFHKENF 888
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572992|ref|XP_003554649.1| PREDICTED: respiratory burst oxidase homolog protein B-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1550 bits (4013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/893 (81%), Positives = 821/893 (91%), Gaps = 10/893 (1%)
Query: 1 MDIQ-DYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDE-CYV 56
M+IQ + + +S SET ST S+RVG+SGP+SGPLVT NKK SS+KS RFKDQ+E +V
Sbjct: 1 MEIQLEQQQESWSETSSTGSRSTRVGFSGPMSGPLVTPNNKK-SSKKSTRFKDQEEEDFV 59
Query: 57 EITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRF 116
EITLDVRDD+VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+F
Sbjct: 60 EITLDVRDDTVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKF 116
Query: 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESK 176
D+VDRTKSGAARALKGLKF+TKNVGTEGW +VEKRF ELAV+G LPK+ F QCIGMNESK
Sbjct: 117 DRVDRTKSGAARALKGLKFMTKNVGTEGWSQVEKRFHELAVEGKLPKTRFSQCIGMNESK 176
Query: 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236
+FA ELFDAL+RRRG+TS+SITK +LR FWEQITDQSFD+RL+TFFDMVDK+ DGRIT+E
Sbjct: 177 EFAGELFDALSRRRGITSASITKDQLREFWEQITDQSFDSRLQTFFDMVDKDADGRITQE 236
Query: 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANL 296
EV+EIIALSASANKLSKIQ+R EEYAALI+EELDP NLGYIE+YNLEMLLLQAP+QS N+
Sbjct: 237 EVQEIIALSASANKLSKIQDRAEEYAALIIEELDPDNLGYIEIYNLEMLLLQAPAQSTNI 296
Query: 297 LTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKF 356
TDSR++SQMLSQ+LVPTKD NPIK+ R L+YFV+DNWKRIWV+LLWLSICA LFTWKF
Sbjct: 297 TTDSRIMSQMLSQKLVPTKDYNPIKRGFRSLAYFVEDNWKRIWVILLWLSICAALFTWKF 356
Query: 357 IQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDN 416
IQYKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDN
Sbjct: 357 IQYKHRAVFDVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDN 416
Query: 417 INFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGT 476
INFHKVIA GIAIGVG+HA AHLTCDFPRLLHATDEEYEPMKPFFG+DRP++YWWFVKGT
Sbjct: 417 INFHKVIAFGIAIGVGIHAIAHLTCDFPRLLHATDEEYEPMKPFFGEDRPNNYWWFVKGT 476
Query: 477 EGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIH 536
EGWTG+ +VVLMAI+YTLAQPWFRRNRLNLPK LK+LTGFNAFWYSHHLFVIVY LFI+H
Sbjct: 477 EGWTGIAIVVLMAIAYTLAQPWFRRNRLNLPKPLKRLTGFNAFWYSHHLFVIVYGLFIVH 536
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMS 596
GY+LYLSK+WYK+TTWMYLA+P++LYACERL+RAFRSGYKSV+ILKVAVYPGNVLAL MS
Sbjct: 537 GYYLYLSKEWYKKTTWMYLAIPMILYACERLLRAFRSGYKSVKILKVAVYPGNVLALHMS 596
Query: 597 KPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656
KPQGFKY+SGQYIFVNC VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK
Sbjct: 597 KPQGFKYSSGQYIFVNCPDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKAVFAKA 656
Query: 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLI 716
CQP S DQSGLLRAD+ Q +N PR+PKL+IDGPYGAPAQDYK+Y+V+LLVGLGIGATPLI
Sbjct: 657 CQPASSDQSGLLRADMLQGNNIPRMPKLVIDGPYGAPAQDYKNYEVILLVGLGIGATPLI 716
Query: 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMN 776
SI+KDVLNN+KQQK+IEE + E G KN+K+KPFAT RAYFYWVTREQGSFEWF+GVM+
Sbjct: 717 SILKDVLNNMKQQKDIEEAMVESG--VKNNKRKPFATNRAYFYWVTREQGSFEWFKGVMD 774
Query: 777 EVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPN 836
+VAEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPN
Sbjct: 775 DVAEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPN 834
Query: 837 WRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
WR+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 835 WRSVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 887
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224123570|ref|XP_002330154.1| predicted protein [Populus trichocarpa] gi|222871610|gb|EEF08741.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1543 bits (3994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/891 (83%), Positives = 813/891 (91%), Gaps = 17/891 (1%)
Query: 1 MDIQDYKDDSLSETGSTTSS-RVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEIT 59
M+IQ+ + DSLSET S TSS R+GYSGPLSGPLVTTT KKNSS+KSARFKD++ YVEIT
Sbjct: 1 MEIQENQQDSLSETESNTSSTRIGYSGPLSGPLVTTT-KKNSSKKSARFKDEE--YVEIT 57
Query: 60 LDVRDDSVSVQNIRGGDSETAFLASRLERK-PSSSSALSARLRQVSQELKRMASSKRFDK 118
LDVRDDSVSVQNI+GGDSETA+LAS+L RK PS S LS +LRQVS ELKRM SSKRFDK
Sbjct: 58 LDVRDDSVSVQNIKGGDSETAYLASQLGRKHPSLGSQLSIKLRQVSHELKRMTSSKRFDK 117
Query: 119 VDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDF 178
DR+KSGAARALKGLKF+TKNVG+EGW E+E RF ELAV+G LPKS FGQCIGM ES +F
Sbjct: 118 YDRSKSGAARALKGLKFMTKNVGSEGWSEIEARFHELAVNGSLPKSKFGQCIGMKESSEF 177
Query: 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEV 238
ASELFDALARRRG+T+ SI K+EL FW+QITDQ FDARL+TFFDMVDK+ DGRITEEEV
Sbjct: 178 ASELFDALARRRGITTPSIIKAELYEFWQQITDQRFDARLQTFFDMVDKDADGRITEEEV 237
Query: 239 KEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLT 298
KE LSKIQER EEYAALIMEELDP NLG+IELYNLEMLLLQAPSQS NL T
Sbjct: 238 KE----------LSKIQERAEEYAALIMEELDPDNLGFIELYNLEMLLLQAPSQSTNLGT 287
Query: 299 DSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQ 358
DSRVLSQ+LSQ+LVPTKD NPIK+ RGLSYFV+DNWKRIWV+ LWL++CA LFTWKF+Q
Sbjct: 288 DSRVLSQLLSQKLVPTKDHNPIKRGYRGLSYFVEDNWKRIWVIGLWLAVCAALFTWKFVQ 347
Query: 359 YKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNIN 418
YKHRAVF VMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDNIN
Sbjct: 348 YKHRAVFDVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDNIN 407
Query: 419 FHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEG 478
FHKVIA+GIAIGVGLHAGAHLTCDFPRLLHATD+EYEPM+ FFG DRPDDYWWFVKGTEG
Sbjct: 408 FHKVIALGIAIGVGLHAGAHLTCDFPRLLHATDDEYEPMEQFFGKDRPDDYWWFVKGTEG 467
Query: 479 WTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGY 538
WTGVVMVVLMA++YTLAQPWFRRNRL+LPK LKKLTGFNAFWYSHHLFVIVY LFIIHGY
Sbjct: 468 WTGVVMVVLMAVAYTLAQPWFRRNRLSLPKTLKKLTGFNAFWYSHHLFVIVYALFIIHGY 527
Query: 539 FLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKP 598
+LYLSKKWYK+TTWMYLAVP+LLY CERL RAFRSGYK+VRILKVAVYPGNVLAL MSKP
Sbjct: 528 YLYLSKKWYKKTTWMYLAVPILLYTCERLTRAFRSGYKTVRILKVAVYPGNVLALHMSKP 587
Query: 599 QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQ 658
QGF+YTSGQY+FVNC+AVS FQWHPFSITSAPGDDYLSIHIRTLGDWTSQLK++F+KVCQ
Sbjct: 588 QGFRYTSGQYVFVNCSAVSTFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKAVFSKVCQ 647
Query: 659 PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISI 718
P S+ QSGLLRAD+ Q DN+PR+P+LLIDGPYGAPAQDYK YDVLLLVGLGIGATPLISI
Sbjct: 648 PASIHQSGLLRADMAQRDNQPRLPRLLIDGPYGAPAQDYKKYDVLLLVGLGIGATPLISI 707
Query: 719 IKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778
+KDVLNNIKQQKE+EEG+ E G K + +KPFATKRAYFYWVTREQGSFEWFRGVMNEV
Sbjct: 708 VKDVLNNIKQQKEMEEGLVESG--IKGNYRKPFATKRAYFYWVTREQGSFEWFRGVMNEV 765
Query: 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWR 838
A+YDQD VIELHNYCTSVYEEGDARSALITMLQS+ HAK+G+DIVS TRVKTHFARPNWR
Sbjct: 766 ADYDQDRVIELHNYCTSVYEEGDARSALITMLQSLQHAKSGVDIVSETRVKTHFARPNWR 825
Query: 839 TVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
VFKHVAV + D+RVGVFYCGAPGLTGELRRL+QDFSRKTTTKFDFHKENF
Sbjct: 826 KVFKHVAVNYPDQRVGVFYCGAPGLTGELRRLAQDFSRKTTTKFDFHKENF 876
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572994|ref|XP_003554650.1| PREDICTED: respiratory burst oxidase homolog protein B-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/893 (81%), Positives = 819/893 (91%), Gaps = 11/893 (1%)
Query: 1 MDIQ-DYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDE-CYV 56
M+IQ + + +S SET ST S+RVG+SGP+SGPLVT NKK SS+KS RFKDQ+E +V
Sbjct: 1 MEIQLEQQQESWSETSSTGSRSTRVGFSGPMSGPLVTPNNKK-SSKKSTRFKDQEEEDFV 59
Query: 57 EITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRF 116
EITLDVRDD+VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+F
Sbjct: 60 EITLDVRDDTVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKF 116
Query: 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESK 176
D+VDRTKSGAARALKGLKF+TKNVGTEGW +VEKRF ELAV+G LPK+ F QCIGMNESK
Sbjct: 117 DRVDRTKSGAARALKGLKFMTKNVGTEGWSQVEKRFHELAVEGKLPKTRFSQCIGMNESK 176
Query: 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236
+FA ELFDAL+RRRG+TS+SITK +LR FWEQITDQSFD+RL+TFFDMVDK+ DGRIT+E
Sbjct: 177 EFAGELFDALSRRRGITSASITKDQLREFWEQITDQSFDSRLQTFFDMVDKDADGRITQE 236
Query: 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANL 296
EV+EIIALSASANKLSKIQ+R EEYAALI+EELDP NLGYIE+YNLEMLLLQAP+QS N+
Sbjct: 237 EVQEIIALSASANKLSKIQDRAEEYAALIIEELDPDNLGYIEIYNLEMLLLQAPAQSTNI 296
Query: 297 LTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKF 356
TDSR++SQMLSQ+LVPTKD NPIK+ R L+YFV+DNWKRIWV+LLWLSICA LFTWKF
Sbjct: 297 TTDSRIMSQMLSQKLVPTKDYNPIKRGFRSLAYFVEDNWKRIWVILLWLSICAALFTWKF 356
Query: 357 IQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDN 416
IQYKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDN
Sbjct: 357 IQYKHRAVFDVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDN 416
Query: 417 INFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGT 476
INFHKVIA GIAIGVG+HA AHLTCDFPRLLHATDEEYEPMKPFFG+DRP++YWWFVKGT
Sbjct: 417 INFHKVIAFGIAIGVGIHAIAHLTCDFPRLLHATDEEYEPMKPFFGEDRPNNYWWFVKGT 476
Query: 477 EGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIH 536
EGWTG+ +VVLMAI+YTLAQPWFRRNRLNLPK LK+LTGFNAFWYSHHLFVIVY LFI+H
Sbjct: 477 EGWTGIAIVVLMAIAYTLAQPWFRRNRLNLPKPLKRLTGFNAFWYSHHLFVIVYGLFIVH 536
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMS 596
GY+LYLSK+WYK+TTWMYLA+P++LYACERL+RAFRSGYKSV+ILKVAVYPGNVLAL MS
Sbjct: 537 GYYLYLSKEWYKKTTWMYLAIPMILYACERLLRAFRSGYKSVKILKVAVYPGNVLALHMS 596
Query: 597 KPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656
KPQGFKY+SGQYIFVNC VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK
Sbjct: 597 KPQGFKYSSGQYIFVNCPDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKAVFAKA 656
Query: 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLI 716
CQP S DQSGLLRADI + + R+PKL+IDGPYGAPAQDYK+Y+V+LLVGLGIGATPLI
Sbjct: 657 CQPASSDQSGLLRADI-ETEINCRMPKLVIDGPYGAPAQDYKNYEVILLVGLGIGATPLI 715
Query: 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMN 776
SI+KDVLNN+KQQK+IEE + E G KN+K+KPFAT RAYFYWVTREQGSFEWF+GVM+
Sbjct: 716 SILKDVLNNMKQQKDIEEAMVESG--VKNNKRKPFATNRAYFYWVTREQGSFEWFKGVMD 773
Query: 777 EVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPN 836
+VAEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPN
Sbjct: 774 DVAEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPN 833
Query: 837 WRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
WR+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 834 WRSVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 886
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505839|ref|XP_003521697.1| PREDICTED: respiratory burst oxidase homolog protein B-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1530 bits (3960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/893 (81%), Positives = 817/893 (91%), Gaps = 12/893 (1%)
Query: 1 MDIQ-DYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQ-DECYV 56
M+IQ + + ++ SET ST S+RVG+SGP+SGPLVT+ K + SARFKDQ DE +V
Sbjct: 1 MEIQLEQQQETWSETSSTGSRSTRVGFSGPMSGPLVTSNKKSSKK--SARFKDQEDEDFV 58
Query: 57 EITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRF 116
EITLDVRDD+VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+F
Sbjct: 59 EITLDVRDDTVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKF 115
Query: 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESK 176
D+VDR KSGAARALKGLKF+TKNVGTEGW +V+KRFDELAVDG LPK+ F QCIGMNESK
Sbjct: 116 DRVDRAKSGAARALKGLKFMTKNVGTEGWSQVDKRFDELAVDGKLPKTRFSQCIGMNESK 175
Query: 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236
+FA ELFDAL+RRRG+TS+SI+K +LR FWEQITDQSFD+RL+TFFDMVDKN DGRIT+E
Sbjct: 176 EFAGELFDALSRRRGITSASISKDQLREFWEQITDQSFDSRLQTFFDMVDKNADGRITQE 235
Query: 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANL 296
EV+EIIALSASANKLSKIQ+R EEYAALI+EELDP N+GYIELYNLEMLLLQAP+QS ++
Sbjct: 236 EVQEIIALSASANKLSKIQDRAEEYAALIIEELDPDNVGYIELYNLEMLLLQAPAQSTHI 295
Query: 297 LTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKF 356
TDSR++SQMLSQ+LVPTKD NPIK+ R L+YFV+DNWKRIWV+LLWLSICA LFTWKF
Sbjct: 296 TTDSRIMSQMLSQKLVPTKDHNPIKRGFRSLAYFVEDNWKRIWVILLWLSICAALFTWKF 355
Query: 357 IQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDN 416
IQYKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDN
Sbjct: 356 IQYKHRAVFDVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDN 415
Query: 417 INFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGT 476
INFHKVIA GIAIGVG+HA AHLTCDFPRLLHATDEEYEPMKPFFG+DRP++YWWFVKGT
Sbjct: 416 INFHKVIAFGIAIGVGIHAIAHLTCDFPRLLHATDEEYEPMKPFFGEDRPNNYWWFVKGT 475
Query: 477 EGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIH 536
EGWTG+ +VVLMAI+YTLAQPWFRRNRL LPK LK+LTGFNAFWYSHHLFVIVY LFI+H
Sbjct: 476 EGWTGIAIVVLMAIAYTLAQPWFRRNRLKLPKPLKRLTGFNAFWYSHHLFVIVYGLFIVH 535
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMS 596
GY+LYLSKKWYK+TTWMYLA+P++LYACERL+RAFRSGYKSV+ILKVAVYPGNVLAL MS
Sbjct: 536 GYYLYLSKKWYKKTTWMYLAIPMILYACERLLRAFRSGYKSVKILKVAVYPGNVLALHMS 595
Query: 597 KPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656
KPQGFKY+SGQYIFVNC VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK
Sbjct: 596 KPQGFKYSSGQYIFVNCPDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKAVFAKA 655
Query: 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLI 716
CQP S DQSGLLRAD+ Q +N PR+PKL+IDGPYGAPAQDYK+Y+V+LLVGLGIGATPLI
Sbjct: 656 CQPASGDQSGLLRADMLQGNNIPRMPKLVIDGPYGAPAQDYKNYEVILLVGLGIGATPLI 715
Query: 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMN 776
SI+KDVLNN+KQQK+IEEG+ E G KN K+KPFAT RAYFYWVTREQGSFEWF+GVM+
Sbjct: 716 SILKDVLNNMKQQKDIEEGMVESG--VKN-KRKPFATNRAYFYWVTREQGSFEWFKGVMD 772
Query: 777 EVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPN 836
+VAEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPN
Sbjct: 773 DVAEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPN 832
Query: 837 WRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
WR+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 833 WRSVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 885
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505841|ref|XP_003521698.1| PREDICTED: respiratory burst oxidase homolog protein B-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1514 bits (3920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/893 (80%), Positives = 812/893 (90%), Gaps = 20/893 (2%)
Query: 1 MDIQ-DYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQ-DECYV 56
M+IQ + + ++ SET ST S+RVG+SGP+SGPLVT+ K + SARFKDQ DE +V
Sbjct: 1 MEIQLEQQQETWSETSSTGSRSTRVGFSGPMSGPLVTSNKKSSKK--SARFKDQEDEDFV 58
Query: 57 EITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRF 116
EITLDVRDD+VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+F
Sbjct: 59 EITLDVRDDTVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKF 115
Query: 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESK 176
D+VDR KSGAARALKGLKF+TKNVGTEGW +V+KRFDELAVDG LPK+ F QCIGMNESK
Sbjct: 116 DRVDRAKSGAARALKGLKFMTKNVGTEGWSQVDKRFDELAVDGKLPKTRFSQCIGMNESK 175
Query: 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236
+FA ELFDAL+RRRG+TS+SI+K +LR FWEQITDQSFD+RL+TFFDMVDKN DGRIT+E
Sbjct: 176 EFAGELFDALSRRRGITSASISKDQLREFWEQITDQSFDSRLQTFFDMVDKNADGRITQE 235
Query: 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANL 296
EV+EIIALSASANKLSKIQ+R EEYAALI+EELDP N+GYIELYNLEMLLLQAP+QS ++
Sbjct: 236 EVQEIIALSASANKLSKIQDRAEEYAALIIEELDPDNVGYIELYNLEMLLLQAPAQSTHI 295
Query: 297 LTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKF 356
TDSR++SQMLSQ+LVPTKD NPIK+ R L+YFV+DNWKRIWV+LLWLSICA LFTWKF
Sbjct: 296 TTDSRIMSQMLSQKLVPTKDHNPIKRGFRSLAYFVEDNWKRIWVILLWLSICAALFTWKF 355
Query: 357 IQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDN 416
IQYKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDN
Sbjct: 356 IQYKHRAVFDVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDN 415
Query: 417 INFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGT 476
INFHKVIA GIAIGVG+HA AHLTCDFPRLLHATDEEYEPMKPFFG+DRP++YWWFVKGT
Sbjct: 416 INFHKVIAFGIAIGVGIHAIAHLTCDFPRLLHATDEEYEPMKPFFGEDRPNNYWWFVKGT 475
Query: 477 EGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIH 536
EGWTG+ +VVLMAI+YTLAQPWFRRNRL LPK LK+LTGFNAFWYSHHLFVIVY LFI+H
Sbjct: 476 EGWTGIAIVVLMAIAYTLAQPWFRRNRLKLPKPLKRLTGFNAFWYSHHLFVIVYGLFIVH 535
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMS 596
GY+LYLSKKWYK+TTWMYLA+P++LYACERL+RAFRSGYKSV+ILKVAVYPGNVLAL MS
Sbjct: 536 GYYLYLSKKWYKKTTWMYLAIPMILYACERLLRAFRSGYKSVKILKVAVYPGNVLALHMS 595
Query: 597 KPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656
KPQGFKY+SGQYIFVNC VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK
Sbjct: 596 KPQGFKYSSGQYIFVNCPDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKAVFAKA 655
Query: 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLI 716
CQP S DQSGLLRAD+ +PKL+IDGPYGAPAQDYK+Y+V+LLVGLGIGATPLI
Sbjct: 656 CQPASGDQSGLLRADM--------MPKLVIDGPYGAPAQDYKNYEVILLVGLGIGATPLI 707
Query: 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMN 776
SI+KDVLNN+KQQK+IEEG+ E G KN K+KPFAT RAYFYWVTREQGSFEWF+GVM+
Sbjct: 708 SILKDVLNNMKQQKDIEEGMVESG--VKN-KRKPFATNRAYFYWVTREQGSFEWFKGVMD 764
Query: 777 EVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPN 836
+VAEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPN
Sbjct: 765 DVAEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPN 824
Query: 837 WRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
WR+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 825 WRSVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 877
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357441729|ref|XP_003591142.1| Respiratory burst oxidase-like protein [Medicago truncatula] gi|355480190|gb|AES61393.1| Respiratory burst oxidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1507 bits (3901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/892 (81%), Positives = 803/892 (90%), Gaps = 10/892 (1%)
Query: 1 MDI-QDYKDDSLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEIT 59
M+I Q+ K +S SE ST S G LSGPL + + S KSA FKD E VEIT
Sbjct: 1 MEIDQENKHESWSEPESTGSRSSGVG--LSGPLASKKQRNRSKNKSASFKDDGEM-VEIT 57
Query: 60 LDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRFDKV 119
L+VRDDSVSVQNIRGGD+ETAFLAS+LE++PSS LSA+LRQVSQELKRM S K FDKV
Sbjct: 58 LNVRDDSVSVQNIRGGDTETAFLASQLEKRPSS---LSAKLRQVSQELKRMTSFKAFDKV 114
Query: 120 DRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFA 179
DR+KSGAARAL+GLKF+TKNVG+EGW +VEKRFDELAV+G LPK+ F QCIGMNESK+FA
Sbjct: 115 DRSKSGAARALQGLKFMTKNVGSEGWSQVEKRFDELAVEGKLPKTRFSQCIGMNESKEFA 174
Query: 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVK 239
ELFDALARRRG+ ++SITK ELR FW+QITDQSFD+RL+TFF MVDKN DGRITEEEVK
Sbjct: 175 GELFDALARRRGIVAASITKEELREFWDQITDQSFDSRLQTFFGMVDKNADGRITEEEVK 234
Query: 240 EIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTD 299
EIIALSASANKLSK+QER EEYAALIMEELDP+NLGYIELYNLEMLLLQAP+QSA++ TD
Sbjct: 235 EIIALSASANKLSKLQERAEEYAALIMEELDPNNLGYIELYNLEMLLLQAPAQSAHITTD 294
Query: 300 SRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQY 359
SRVLSQMLSQ+LVPTK+RNPIK+ R L+YF++DNWKRIW++ LWLSICA LFTWKFIQY
Sbjct: 295 SRVLSQMLSQKLVPTKERNPIKRAFRELAYFMEDNWKRIWIIALWLSICAALFTWKFIQY 354
Query: 360 KHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINF 419
K RAVFHVMGYCVTTAKG AETLKFNMALILLPVCRNTITWLRSRT+LG VVPFDDNINF
Sbjct: 355 KRRAVFHVMGYCVTTAKGGAETLKFNMALILLPVCRNTITWLRSRTRLGMVVPFDDNINF 414
Query: 420 HKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGW 479
HKVIA GIAIGVGLHA +HLTCDFPRLLHATDEEYEPMK FFGD+RP++YWWFVKGTEGW
Sbjct: 415 HKVIAFGIAIGVGLHAISHLTCDFPRLLHATDEEYEPMKQFFGDERPNNYWWFVKGTEGW 474
Query: 480 TGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYF 539
TGVVMVVLMAI++ LAQPWFRRNRLNLPK LKKLTGFNAFWYSHHLFVIVYVLFIIHGYF
Sbjct: 475 TGVVMVVLMAIAFILAQPWFRRNRLNLPKPLKKLTGFNAFWYSHHLFVIVYVLFIIHGYF 534
Query: 540 LYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQ 599
LYLSKKWYK+TTWMYLAVP++LY CERL+RAFRSGYKSVRILKVAVYPGNVLAL SKPQ
Sbjct: 535 LYLSKKWYKKTTWMYLAVPMILYGCERLLRAFRSGYKSVRILKVAVYPGNVLALHASKPQ 594
Query: 600 GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQP 659
GFKYTSGQYI+VNC+ +S F+WHPFSITSAPGDDY+S+HIRTLGDWTSQLK IFAK CQP
Sbjct: 595 GFKYTSGQYIYVNCSDISPFEWHPFSITSAPGDDYISVHIRTLGDWTSQLKGIFAKACQP 654
Query: 660 PSVDQSGLLRADIGQADNR-PRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISI 718
+ DQSGLLRAD+ + PR+P+L IDGPYGAPAQDYK+Y+VLLLVGLGIGATPLISI
Sbjct: 655 ANDDQSGLLRADMLPGKSSLPRMPRLRIDGPYGAPAQDYKNYEVLLLVGLGIGATPLISI 714
Query: 719 IKDVLNNIKQQKE-IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNE 777
+KDVLNNIKQQ+E +EEG + G KN+KK+PFATKRAYFYWVTREQGSFEWF+GVMNE
Sbjct: 715 LKDVLNNIKQQEEDLEEGGEVESG-VKNNKKRPFATKRAYFYWVTREQGSFEWFKGVMNE 773
Query: 778 VAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNW 837
VAE D++GVIELHNYCTSVYEEGDARSALITMLQS+HHAKNG+D+VS TRVKTHFARPNW
Sbjct: 774 VAENDKEGVIELHNYCTSVYEEGDARSALITMLQSLHHAKNGVDVVSETRVKTHFARPNW 833
Query: 838 RTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
R V+KHVA+KH +++VGVFYCGA GL GELR+LS DFSRKT TKFDFHKENF
Sbjct: 834 RNVYKHVALKHPEKKVGVFYCGAHGLVGELRKLSLDFSRKTGTKFDFHKENF 885
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572996|ref|XP_003554651.1| PREDICTED: respiratory burst oxidase homolog protein B-like isoform 3 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1505 bits (3896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/893 (80%), Positives = 807/893 (90%), Gaps = 19/893 (2%)
Query: 1 MDIQ-DYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDE-CYV 56
M+IQ + + +S SET ST S+RVG+SGP+SGPLVT NKK SS+KS RFKDQ+E +V
Sbjct: 1 MEIQLEQQQESWSETSSTGSRSTRVGFSGPMSGPLVTPNNKK-SSKKSTRFKDQEEEDFV 59
Query: 57 EITLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRF 116
EITLDVRDD+VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+F
Sbjct: 60 EITLDVRDDTVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKF 116
Query: 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESK 176
D+VDRTKSGAARALKGLKF+TKNVGTEGW +VEKRF ELAV+G LPK+ F QCIGMNESK
Sbjct: 117 DRVDRTKSGAARALKGLKFMTKNVGTEGWSQVEKRFHELAVEGKLPKTRFSQCIGMNESK 176
Query: 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236
+FA ELFDAL+RRRG+TS+SITK +LR FWEQITDQSFD+RL+TFFDMVDK+ DGRIT+E
Sbjct: 177 EFAGELFDALSRRRGITSASITKDQLREFWEQITDQSFDSRLQTFFDMVDKDADGRITQE 236
Query: 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANL 296
EV+EIIALSASANKLSKIQ+R EEYAALI+EELDP NLGYIE+Y L L +
Sbjct: 237 EVQEIIALSASANKLSKIQDRAEEYAALIIEELDPDNLGYIEVYILSNYFLNS------- 289
Query: 297 LTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKF 356
TDSR++SQMLSQ+LVPTKD NPIK+ R L+YFV+DNWKRIWV+LLWLSICA LFTWKF
Sbjct: 290 -TDSRIMSQMLSQKLVPTKDYNPIKRGFRSLAYFVEDNWKRIWVILLWLSICAALFTWKF 348
Query: 357 IQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDN 416
IQYKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDN
Sbjct: 349 IQYKHRAVFDVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDN 408
Query: 417 INFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGT 476
INFHKVIA GIAIGVG+HA AHLTCDFPRLLHATDEEYEPMKPFFG+DRP++YWWFVKGT
Sbjct: 409 INFHKVIAFGIAIGVGIHAIAHLTCDFPRLLHATDEEYEPMKPFFGEDRPNNYWWFVKGT 468
Query: 477 EGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIH 536
EGWTG+ +VVLMAI+YTLAQPWFRRNRLNLPK LK+LTGFNAFWYSHHLFVIVY LFI+H
Sbjct: 469 EGWTGIAIVVLMAIAYTLAQPWFRRNRLNLPKPLKRLTGFNAFWYSHHLFVIVYGLFIVH 528
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMS 596
GY+LYLSK+WYK+TTWMYLA+P++LYACERL+RAFRSGYKSV+ILKVAVYPGNVLAL MS
Sbjct: 529 GYYLYLSKEWYKKTTWMYLAIPMILYACERLLRAFRSGYKSVKILKVAVYPGNVLALHMS 588
Query: 597 KPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656
KPQGFKY+SGQYIFVNC VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK
Sbjct: 589 KPQGFKYSSGQYIFVNCPDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKAVFAKA 648
Query: 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLI 716
CQP S DQSGLLRADI + + R+PKL+IDGPYGAPAQDYK+Y+V+LLVGLGIGATPLI
Sbjct: 649 CQPASSDQSGLLRADI-ETEINCRMPKLVIDGPYGAPAQDYKNYEVILLVGLGIGATPLI 707
Query: 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMN 776
SI+KDVLNN+KQQK+IEE + E G KN+K+KPFAT RAYFYWVTREQGSFEWF+GVM+
Sbjct: 708 SILKDVLNNMKQQKDIEEAMVESG--VKNNKRKPFATNRAYFYWVTREQGSFEWFKGVMD 765
Query: 777 EVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPN 836
+VAEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPN
Sbjct: 766 DVAEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPN 825
Query: 837 WRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
WR+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 826 WRSVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 878
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|371767603|gb|AEX56132.1| NADPH oxidase [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 1502 bits (3888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/891 (80%), Positives = 812/891 (91%), Gaps = 12/891 (1%)
Query: 1 MDIQDYKDDSLSETGST--TSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEI 58
M+I++++ +S SE GS+ S+RVG+SGP+SGPLVT K +S+KSARFKD DE VEI
Sbjct: 1 MEIEEHQIESWSEAGSSGSRSTRVGFSGPMSGPLVTN---KKTSKKSARFKD-DEELVEI 56
Query: 59 TLDVRDDSVSVQNIRGGDSETAFLASRLERKPSSSSALSARLRQVSQELKRMASSKRFDK 118
TLDVRDD VSVQNIRGGD ETA LASRLE++PSS LS RLRQVSQELKRM SSK+FD+
Sbjct: 57 TLDVRDDVVSVQNIRGGDPETALLASRLEKRPSS---LSVRLRQVSQELKRMTSSKKFDR 113
Query: 119 VDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDF 178
VDRTKSGAARAL+G KF+TKNVG+EGW +VEKRF +LAV+G LPK+ FGQCIGM ESK+F
Sbjct: 114 VDRTKSGAARALRGFKFMTKNVGSEGWSQVEKRFLDLAVEGKLPKTRFGQCIGMQESKEF 173
Query: 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEV 238
A ELFDAL+RRRG+TS+SITK ELR FWEQITDQSFD+RL+TFFDMVDKN DGRIT+EEV
Sbjct: 174 AGELFDALSRRRGITSASITKDELREFWEQITDQSFDSRLQTFFDMVDKNADGRITQEEV 233
Query: 239 KEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLT 298
+EII LSASANKLSK+QER +EYAALIMEELDP NLGYIEL+NLEMLLLQAP+QS ++ T
Sbjct: 234 QEIIGLSASANKLSKLQERSDEYAALIMEELDPDNLGYIELHNLEMLLLQAPAQSTHITT 293
Query: 299 DSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQ 358
DSRV+SQMLSQ+LVPTK+ NPIK+ R L+YFV+DNWKRIWV+ LWL+ICA LFTWKFI+
Sbjct: 294 DSRVMSQMLSQKLVPTKEYNPIKRGFRALAYFVEDNWKRIWVIALWLAICAALFTWKFIE 353
Query: 359 YKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNIN 418
YKHRAVF VMGYCVT+AKGAAETLKFNMALILLPVCRNTITWLRS+TKLG VPFDDNIN
Sbjct: 354 YKHRAVFKVMGYCVTSAKGAAETLKFNMALILLPVCRNTITWLRSKTKLGMAVPFDDNIN 413
Query: 419 FHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEG 478
FHKVIA GIA+GVG+HA AHLTCDFPRLLH T+EEYEPMKPFFG+DRP+DYWWFVKGTEG
Sbjct: 414 FHKVIAFGIAVGVGIHAIAHLTCDFPRLLHTTEEEYEPMKPFFGEDRPNDYWWFVKGTEG 473
Query: 479 WTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGY 538
WTG+ +VVLMAI++TLAQPWFRRNRL LPK LKKLTGFNAFWYSHHLFVIVY L I+HGY
Sbjct: 474 WTGITIVVLMAIAFTLAQPWFRRNRLKLPKPLKKLTGFNAFWYSHHLFVIVYGLLIVHGY 533
Query: 539 FLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKP 598
+LYL+KKWYK+TTWMY+A+PV+LYACERL+RAFRSG KSV+ILKVAVYPGNVLAL +SKP
Sbjct: 534 YLYLTKKWYKKTTWMYIAIPVILYACERLLRAFRSGNKSVKILKVAVYPGNVLALHVSKP 593
Query: 599 QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQ 658
QGFKY+SGQYIFVNC+ VS FQWHPFSITSAPGDDY+S+HIRTLGDWTSQLK++FAK CQ
Sbjct: 594 QGFKYSSGQYIFVNCSDVSPFQWHPFSITSAPGDDYVSVHIRTLGDWTSQLKNVFAKACQ 653
Query: 659 PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISI 718
P S DQSGLLRAD+ Q +N PR+PKLLIDGPYGAPAQDYK+Y+V+LLVGLGIGATPLISI
Sbjct: 654 PASGDQSGLLRADMLQGNNIPRMPKLLIDGPYGAPAQDYKNYEVILLVGLGIGATPLISI 713
Query: 719 IKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778
+KDVLNN+KQQK++EEGI E G KN K+KPFAT RAYFYWVTREQGSFEWF+GVM+EV
Sbjct: 714 LKDVLNNMKQQKDLEEGIVESG--VKN-KRKPFATNRAYFYWVTREQGSFEWFKGVMDEV 770
Query: 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWR 838
AEYD+DG+IELHNYCTSVYEEGDARSALITMLQS+HHAK+G+DIVSGTRVKTHFARPNWR
Sbjct: 771 AEYDKDGIIELHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKTHFARPNWR 830
Query: 839 TVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
+VFKH A+KH +RVGVFYCGA L GEL+RLS DFSRKT TKFDFHKENF
Sbjct: 831 SVFKHTALKHPGKRVGVFYCGAHTLVGELKRLSLDFSRKTNTKFDFHKENF 881
|
Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435661|ref|XP_004135613.1| PREDICTED: respiratory burst oxidase homolog protein B-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1500 bits (3883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/897 (79%), Positives = 803/897 (89%), Gaps = 16/897 (1%)
Query: 1 MDIQDYKD-DSLSETGSTTSS-RVGYSGPLSGPLVT---TTNKKNSSRKSARFKDQDECY 55
M+ Q+ K DS S+T S SS RVG+SGPL+G V T + +S+R + R KD D+ Y
Sbjct: 1 MESQENKPMDSCSDTESIGSSKRVGFSGPLTGASVAYKRTNSYSSSTRSTMRIKDDDQ-Y 59
Query: 56 VEITLDVRDDSVSVQNIRGGDSETAFLASRLE-RKPSSSSALSARLRQVSQELKRMASSK 114
VEITLDVRDD+VSVQNIRGGDSETA LASRLE ++P+ S LS +L+QVSQEL+RM SSK
Sbjct: 60 VEITLDVRDDTVSVQNIRGGDSETAMLASRLETKRPTLGSQLSFKLKQVSQELRRMTSSK 119
Query: 115 RFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNE 174
F+++DRTKSGA+RAL GL+F+TK+VG+E W E+E RFD+LA++G LPKS F +CIGMNE
Sbjct: 120 SFNRIDRTKSGASRALNGLRFMTKSVGSEAWSEIENRFDQLAINGELPKSLFARCIGMNE 179
Query: 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRIT 234
S +FA ELFDALARRRG++S+SI+K ELR FWEQI D+SFDARL+ FFDMVDKN DGRI+
Sbjct: 180 SSEFAGELFDALARRRGISSNSISKGELREFWEQIIDESFDARLQIFFDMVDKNADGRIS 239
Query: 235 EEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSA 294
+EVKEIIALSASANKLSKI++ EEYAALIMEELDP NLGYIELYNLEMLLLQAP+Q+
Sbjct: 240 GKEVKEIIALSASANKLSKIKDDAEEYAALIMEELDPDNLGYIELYNLEMLLLQAPNQAT 299
Query: 295 --NLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLF 352
N +TDSRVLSQ+LSQ+LVPTK+ NPIK+ R L YFV+DNWKRIWV LWL+ICAGLF
Sbjct: 300 APNRVTDSRVLSQLLSQKLVPTKEYNPIKRTYRSLHYFVEDNWKRIWVFSLWLAICAGLF 359
Query: 353 TWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVP 412
WKFIQY++RAVFHVMGYCVTTAKGAAETLKFNMA+ILLPVCRNTITWLRS+TKLG VVP
Sbjct: 360 AWKFIQYRNRAVFHVMGYCVTTAKGAAETLKFNMAIILLPVCRNTITWLRSKTKLGSVVP 419
Query: 413 FDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWF 472
FDDN+NFHKVIAVGIA+GV LHAGAHLTCDFP+LLHATD EYEPMKPFFG+ RP++YWWF
Sbjct: 420 FDDNVNFHKVIAVGIAVGVLLHAGAHLTCDFPKLLHATDAEYEPMKPFFGEVRPNNYWWF 479
Query: 473 VKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVL 532
VKGTEGWTGVVMVVLM I++TLAQPWFRRNRLNLPKI+K+LTGFNAFWYSHHLFVIVYVL
Sbjct: 480 VKGTEGWTGVVMVVLMIIAFTLAQPWFRRNRLNLPKIIKRLTGFNAFWYSHHLFVIVYVL 539
Query: 533 FIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLA 592
FIIHGY+LYLSKKWYK+TTWMYLAVPVLLYACERLIRAFRSGYK+VRI KVAVYPGNVLA
Sbjct: 540 FIIHGYYLYLSKKWYKKTTWMYLAVPVLLYACERLIRAFRSGYKTVRISKVAVYPGNVLA 599
Query: 593 LQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSI 652
LQMSKP GFKYTSGQYIFVNC+A+S FQWHPFSITSAPGDDYLSIHIRT+GDWTSQLK+I
Sbjct: 600 LQMSKPHGFKYTSGQYIFVNCSAISPFQWHPFSITSAPGDDYLSIHIRTVGDWTSQLKTI 659
Query: 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGA 712
F+KVCQPPSV+QSGLLRADIGQ+ N+ R+P+LLIDGPYGAPAQDYK YDVLLLVGLGIGA
Sbjct: 660 FSKVCQPPSVNQSGLLRADIGQSSNKIRLPRLLIDGPYGAPAQDYKQYDVLLLVGLGIGA 719
Query: 713 TPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFR 772
TPLISI+KDVLNNIK QK+IE G+ + + KPF TKRAYFYWVTREQGSFEWFR
Sbjct: 720 TPLISIVKDVLNNIKDQKDIENGVGD-------KQAKPFVTKRAYFYWVTREQGSFEWFR 772
Query: 773 GVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHF 832
GVM+EVAE D+D VIELHNYCTSVYEEGDARSALITMLQ ++HAKNG+DIVSGTRVKTHF
Sbjct: 773 GVMDEVAENDRDRVIELHNYCTSVYEEGDARSALITMLQDLNHAKNGVDIVSGTRVKTHF 832
Query: 833 ARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
ARPNWR V KHVAV H D+RVGVFYCGA GL GELRRLSQDFSRKTTTKFDFHKENF
Sbjct: 833 ARPNWRNVLKHVAVNHPDQRVGVFYCGAQGLVGELRRLSQDFSRKTTTKFDFHKENF 889
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 889 | ||||||
| TAIR|locus:2036104 | 843 | RBOHB "respiratory burst oxida | 0.921 | 0.971 | 0.706 | 0.0 | |
| UNIPROTKB|Q5ZAJ0 | 905 | RBOHB "Respiratory burst oxida | 0.870 | 0.855 | 0.694 | 0.0 | |
| TAIR|locus:2160917 | 921 | RBOHD "respiratory burst oxida | 0.947 | 0.914 | 0.631 | 3e-311 | |
| TAIR|locus:2157348 | 905 | RHD2 "ROOT HAIR DEFECTIVE 2" [ | 0.951 | 0.934 | 0.629 | 3.9e-298 | |
| TAIR|locus:2183309 | 902 | RBOHA "respiratory burst oxida | 0.879 | 0.866 | 0.620 | 7.1e-279 | |
| TAIR|locus:2117258 | 849 | AT4G25090 [Arabidopsis thalian | 0.870 | 0.911 | 0.602 | 3.5e-265 | |
| TAIR|locus:2024603 | 944 | RBOH F "respiratory burst oxid | 0.976 | 0.919 | 0.565 | 2.2e-263 | |
| TAIR|locus:2128248 | 941 | AT4G11230 [Arabidopsis thalian | 0.869 | 0.821 | 0.572 | 1e-233 | |
| TAIR|locus:2168113 | 886 | AT5G60010 [Arabidopsis thalian | 0.862 | 0.865 | 0.508 | 2e-214 | |
| TAIR|locus:2077192 | 912 | AT3G45810 [Arabidopsis thalian | 0.681 | 0.664 | 0.483 | 2.8e-211 |
| TAIR|locus:2036104 RBOHB "respiratory burst oxidase homolog B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3124 (1104.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 604/855 (70%), Positives = 700/855 (81%)
Query: 42 SRKSARFKDQ-DECYVEITLDVRDDSVSVQNIRGGDSETAFLASRLERKPXXXXXXXXXX 100
SR A D DE YVEITL+VRD++++ + + + L+ RL+
Sbjct: 18 SRCKATGSDNPDEDYVEITLEVRDETINTMKAKA--TLRSVLSGRLKTM----------- 64
Query: 101 XQVSQELKRMASSKRFDKVDRTKS-GAARALKGLKFITKN--VGTEGWGEVEKRFDELAV 157
+K ++ + R ++DR+KS GA AL+GL+FI KN VG GW EV RFD+LAV
Sbjct: 65 ------VKSLSFASR--RLDRSKSFGAMFALRGLRFIAKNDAVG-RGWDEVAMRFDKLAV 115
Query: 158 DGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDAR 217
+G LPKS FG CIGM ES +F +ELF+AL RRRG TSSSITK+EL FWEQIT SFD R
Sbjct: 116 EGKLPKSKFGHCIGMVESSEFVNELFEALVRRRGTTSSSITKTELFEFWEQITGNSFDDR 175
Query: 218 LETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI 277
L+ FFDMVDKNLDGRIT +EVKEIIALSASANKLSKI+E V+EYAALIMEELD NLGYI
Sbjct: 176 LQIFFDMVDKNLDGRITGDEVKEIIALSASANKLSKIKENVDEYAALIMEELDRDNLGYI 235
Query: 278 ELYNLEMLLLQAPSQSANLLTDS--RVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNW 335
EL+NLE LLLQ PSQS N + + R L++MLSQ+L+PTKDRNP+K+ +SYF +NW
Sbjct: 236 ELHNLETLLLQVPSQSNNSPSSANKRALNKMLSQKLIPTKDRNPVKRFAMNISYFFLENW 295
Query: 336 KRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCR 395
KRIWV+ LW+SIC LFTWKF+QYK + VF VMGYCVT AKG+AETLKFNMALILLPVCR
Sbjct: 296 KRIWVLTLWISICITLFTWKFLQYKRKTVFEVMGYCVTVAKGSAETLKFNMALILLPVCR 355
Query: 396 NTITWLRSRTKL-GQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEY 454
NTITWLR+++KL G VVPFDDNINFHKV+A GIA+G+GLHA +HL CDFPRLLHA + E+
Sbjct: 356 NTITWLRTKSKLIGSVVPFDDNINFHKVVAFGIAVGIGLHAISHLACDFPRLLHAKNVEF 415
Query: 455 EPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLT 514
EPMK FFGD+RP++Y WF+KGT+GWTGV MVVLM ++Y LAQ WFRRNR NLPK LK+LT
Sbjct: 416 EPMKKFFGDERPENYGWFMKGTDGWTGVTMVVLMLVAYVLAQSWFRRNRANLPKSLKRLT 475
Query: 515 GFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSG 574
GFNAFWYSHHLFVIVYVL I+HGYF+YLSK+WY +TTWMYLAVPVLLYA ERLIRAFR G
Sbjct: 476 GFNAFWYSHHLFVIVYVLLIVHGYFVYLSKEWYHKTTWMYLAVPVLLYAFERLIRAFRPG 535
Query: 575 YKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDY 634
K+V++LKVAVYPGNVL+L MSKP+GFKYTSGQYI++NC+ VS QWHPFSITSA GDDY
Sbjct: 536 AKAVKVLKVAVYPGNVLSLYMSKPKGFKYTSGQYIYINCSDVSPLQWHPFSITSASGDDY 595
Query: 635 LSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694
LS+HIRTLGDWTSQLKS+++KVCQ PS QSGL ADIGQA+N R P+LLIDGPYGAPA
Sbjct: 596 LSVHIRTLGDWTSQLKSLYSKVCQLPSTSQSGLFIADIGQANNITRFPRLLIDGPYGAPA 655
Query: 695 QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATK 754
QDY++YDVLLLVGLGIGATPLISII+DVLNNIK Q IE G T K ATK
Sbjct: 656 QDYRNYDVLLLVGLGIGATPLISIIRDVLNNIKNQNSIERG-------TNQHIKNYVATK 708
Query: 755 RAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814
RAYFYWVTREQGS EWF VMNEVAEYD +G+IELHNYCTSVYEEGDARSALITMLQS+H
Sbjct: 709 RAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALITMLQSLH 768
Query: 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDF 874
HAK+G+DIVSGTRV+THFARPNWR+VFKHVAV H ++RVGVFYCG + GEL+RL+QDF
Sbjct: 769 HAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGELKRLAQDF 828
Query: 875 SRKTTTKFDFHKENF 889
SRKTTTKF+FHKENF
Sbjct: 829 SRKTTTKFEFHKENF 843
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|
| UNIPROTKB|Q5ZAJ0 RBOHB "Respiratory burst oxidase homolog protein B" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2957 (1046.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 544/783 (69%), Positives = 658/783 (84%)
Query: 112 SSKRFDK-VDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCI 170
S+KR K +DRTKS AA ALKGL+F+T VG +GW VEKRF++L VDG+L +S FG+CI
Sbjct: 127 SAKRVRKRLDRTKSSAAVALKGLQFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCI 186
Query: 171 GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLD 230
GM+ S +FA ++FD+LAR+RG+ +TK EL+ F+EQ+TDQ FD RL TFFDMVDKN D
Sbjct: 187 GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNAD 246
Query: 231 GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290
GR+T EEVKEIIALSASANKLSKI+ER +EY ALIMEELDP NLGYIE+ +LE LLLQ+P
Sbjct: 247 GRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSP 306
Query: 291 SQSA--NLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSIC 348
S++A + T S LS+ LS +L K+ +P++ + YF+++NWKR WVM LW+SIC
Sbjct: 307 SEAAARSTTTHSSKLSKALSMKLASNKEMSPVRHYWQQFMYFLEENWKRSWVMTLWISIC 366
Query: 349 AGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLG 408
LF WKFIQY++RAVF +MGYCVTTAKGAAETLKFNMAL+LLPVCRNTITW+RS+T++G
Sbjct: 367 IALFIWKFIQYRNRAVFGIMGYCVTTAKGAAETLKFNMALVLLPVCRNTITWIRSKTQVG 426
Query: 409 QVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDD 468
VVPF+DNINFHKVIA G+A+GV LHAGAHLTCDFPRLLHA+D +YE MKPFFG+ RP +
Sbjct: 427 AVVPFNDNINFHKVIAAGVAVGVALHAGAHLTCDFPRLLHASDAQYELMKPFFGEKRPPN 486
Query: 469 YWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVI 528
YWWFVKGTEGWTGVVMVVLMAI++TLAQPWFRRN+L LKK+TGFNAFW++HHLFVI
Sbjct: 487 YWWFVKGTEGWTGVVMVVLMAIAFTLAQPWFRRNKLKDSNPLKKMTGFNAFWFTHHLFVI 546
Query: 529 VYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPG 588
VY L +HG LYLS+KWYK+TTWMYLAVPV+LY ER++R FRS + +V I KVAVYPG
Sbjct: 547 VYTLLFVHGTCLYLSRKWYKKTTWMYLAVPVVLYVSERILRLFRS-HDAVGIQKVAVYPG 605
Query: 589 NVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQ 648
NVLAL MSKP GF+Y SGQYIF+ C AVS ++WHPFSITSAPGDDYLS+HIRT GDWTS+
Sbjct: 606 NVLALYMSKPPGFRYRSGQYIFIKCTAVSPYEWHPFSITSAPGDDYLSVHIRTRGDWTSR 665
Query: 649 LKSIFAKVCQPPSVDQSGLLRADI--GQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLV 706
L+++F++ C+PP+ +SGLLRAD+ G D + R PKLL+DGPYGAPAQDY++YDVLLL+
Sbjct: 666 LRTVFSEACRPPTEGESGLLRADLSKGITDEKARFPKLLVDGPYGAPAQDYREYDVLLLI 725
Query: 707 GLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQG 766
GLGIGATPLISI+KDVLN+I+ + + G TE ++K +KKKPF TKRAYFYWVTRE+G
Sbjct: 726 GLGIGATPLISIVKDVLNHIQGEGSV--GTTEPESSSK-AKKKPFMTKRAYFYWVTREEG 782
Query: 767 SFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGT 826
SFEWFRGVMNEV+E D+DGVIELHN+C+SVY+EGDARSALI MLQ + HAK G+DI+SGT
Sbjct: 783 SFEWFRGVMNEVSEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELQHAKKGVDILSGT 842
Query: 827 RVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHK 886
VKTHFARPNWR+VFK VAV H ++RVGVFYCG P L +LR+LS DF+ KT T+FDFHK
Sbjct: 843 SVKTHFARPNWRSVFKKVAVSHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNTRFDFHK 902
Query: 887 ENF 889
ENF
Sbjct: 903 ENF 905
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| TAIR|locus:2160917 RBOHD "respiratory burst oxidase homologue D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2894 (1023.8 bits), Expect = 3.0e-311, Sum P(2) = 3.0e-311
Identities = 550/871 (63%), Positives = 681/871 (78%)
Query: 38 KKNSSRKSARFKDQDECYVEITLDVRDDSV-SVQNIRGG-----DSETAFLASR-LE--- 87
K+++S R D + + + + +V SVQ GG D E A L + LE
Sbjct: 61 KRSNSVAGGRGDDDEYVEITLDIRDDSVAVHSVQQAAGGGGHLEDPELALLTKKTLESSL 120
Query: 88 RKPXXXXXXXXXXXQV---SQELKRMAS---SKRFDKVDRTKSGAARALKGLKFITKNVG 141
++ S+EL+R+ S S + DRT S A ALKGLKFI
Sbjct: 121 NNTTSLSFFRSTSSRIKNASRELRRVFSRRPSPAVRRFDRTSSAAIHALKGLKFIATK-- 178
Query: 142 TEGWGEVEKRFDELAVD--GMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSIT 198
T W V++RFD+L+ D G+L + F +C+GMN ESKDFA +LF ALARR ++ +IT
Sbjct: 179 TAAWPAVDQRFDKLSADSNGLLLSAKFWECLGMNKESKDFADQLFRALARRNNVSGDAIT 238
Query: 199 KSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258
K +LR FWEQI+D+SFDA+L+ FFDMVDK+ DGR+TEEEV EII+LSASANKLS IQ++
Sbjct: 239 KEQLRIFWEQISDESFDAKLQVFFDMVDKDEDGRVTEEEVAEIISLSASANKLSNIQKQA 298
Query: 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRN 318
+EYAALIMEELDP N G+I + NLEMLLLQAP+QS + DSR+LSQMLSQ+L P K+ N
Sbjct: 299 KEYAALIMEELDPDNAGFIMIENLEMLLLQAPNQSVRM-GDSRILSQMLSQKLRPAKESN 357
Query: 319 PIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGA 378
P+ + + YF+ DNW+R+W+M+LWL IC GLFT+KFIQYK++A + VMGYCV AKG
Sbjct: 358 PLVRWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGVMGYCVCVAKGG 417
Query: 379 AETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAH 438
AETLKFNMALILLPVCRNTITWLR++TKLG VVPFDD++NFHKVIA GI +GV LHAGAH
Sbjct: 418 AETLKFNMALILLPVCRNTITWLRNKTKLGTVVPFDDSLNFHKVIASGIVVGVLLHAGAH 477
Query: 439 LTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPW 498
LTCDFPRL+ A ++ YEPM+ +FGD +P YWWFVKG EGWTG+VMVVLMAI++TLA PW
Sbjct: 478 LTCDFPRLIAADEDTYEPMEKYFGD-QPTSYWWFVKGVEGWTGIVMVVLMAIAFTLATPW 536
Query: 499 FRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVP 558
FRRN+LNLP LKKLTGFNAFWY+HHLF+IVY L I+HG LYL+K WY++TTWMYLAVP
Sbjct: 537 FRRNKLNLPNFLKKLTGFNAFWYTHHLFIIVYALLIVHGIKLYLTKIWYQKTTWMYLAVP 596
Query: 559 VLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQ 618
+LLYA ERL+RAFRS K V+++KVAVYPGNVL+L M+KPQGFKY SGQ++ VNC AVS
Sbjct: 597 ILLYASERLLRAFRSSIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSP 656
Query: 619 FQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNR 678
F+WHPFSITSAPGDDYLS+HIRTLGDWT +L+++F++VC+PP+ +SGLLRAD G N
Sbjct: 657 FEWHPFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDG-NL 715
Query: 679 PRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITE 738
P PK+LIDGPYGAPAQDYK YDV+LLVGLGIGATP+ISI+KD++NN+K + E
Sbjct: 716 P-FPKVLIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIINNMKGPDRDSD--IE 772
Query: 739 DGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYE 798
+ + NSK F T++AYFYWVTREQGSFEWF+G+M+E++E D++G+IELHNYCTSVYE
Sbjct: 773 NNNSNNNSKG--FKTRKAYFYWVTREQGSFEWFKGIMDEISELDEEGIIELHNYCTSVYE 830
Query: 799 EGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858
EGDAR ALI MLQS+ HAKNG+D+VSGTRVK+HFA+PNWR V+K +AV+H +R+GVFYC
Sbjct: 831 EGDARVALIAMLQSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYC 890
Query: 859 GAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
G PG+ EL+ L+ DFSRKTTTKFDFHKENF
Sbjct: 891 GMPGMIKELKNLALDFSRKTTTKFDFHKENF 921
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| TAIR|locus:2157348 RHD2 "ROOT HAIR DEFECTIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2862 (1012.5 bits), Expect = 3.9e-298, P = 3.9e-298
Identities = 551/875 (62%), Positives = 679/875 (77%)
Query: 37 NKKNSSRKSARFKDQDECYVEITLDVRDDSVSVQNIR--GGDS-----ETAFLA-SRLER 88
N + ++ S R + YV++T+DV+DD+VSV +++ GG S E L +RLE+
Sbjct: 38 NSRFTAENSQRTRTAP--YVDLTVDVQDDTVSVHSLKMEGGSSVEESPELTLLKRNRLEK 95
Query: 89 KPXXXXXXXXXXXQVSQELKRMASSK---------RFDKVDRTKSGAARALKGLKFITKN 139
K VS ELKR+ S R K+DRTKS A++ALKGLKFI+K
Sbjct: 96 K----TTVVKRLASVSHELKRLTSVSGGIGGRKPPRPAKLDRTKSAASQALKGLKFISKT 151
Query: 140 VGTEGWGEVEKRFDELAVD--GMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSI 197
G GW VEKRF+++ G+L ++ FG+CIGM SKDFA ELFDALARRR +T I
Sbjct: 152 DGGAGWSAVEKRFNQITATTGGLLLRTKFGECIGMT-SKDFALELFDALARRRNITGEVI 210
Query: 198 TKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQER 257
+L+ FWEQI DQSFD+RL+TFFDMVDK+ DGR+TE+EV+EII+LSASAN LS IQ+R
Sbjct: 211 DGDQLKEFWEQINDQSFDSRLKTFFDMVDKDADGRLTEDEVREIISLSASANNLSTIQKR 270
Query: 258 VEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRV-LSQMLSQRLVPTKD 316
+EYAALIMEELDP N+GYI L +LE LLLQA +QS T R LS M+SQRL PT +
Sbjct: 271 ADEYAALIMEELDPDNIGYIMLESLETLLLQAATQSVITSTGERKNLSHMMSQRLKPTFN 330
Query: 317 RNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAK 376
RNP+K+ RGL +F+ DNW+R WV++LW + A LFT+K+IQY+ V+ VMG CV AK
Sbjct: 331 RNPLKRWYRGLRFFLLDNWQRCWVIVLWFIVMAILFTYKYIQYRRSPVYPVMGDCVCMAK 390
Query: 377 GAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAG 436
GAAET+K NMALILLPVCRNTITWLR++T+LG+VVPFDDN+NFHKVIAVGI +GV +HAG
Sbjct: 391 GAAETVKLNMALILLPVCRNTITWLRNKTRLGRVVPFDDNLNFHKVIAVGIIVGVTMHAG 450
Query: 437 AHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQ 496
AHL CDFPRLLHAT E Y P++ FFGD++P YW FV EG TG+VMV+LMAI++TLA
Sbjct: 451 AHLACDFPRLLHATPEAYRPLRQFFGDEQPKSYWHFVNSVEGITGLVMVLLMAIAFTLAT 510
Query: 497 PWFRRNRLN-LPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYL 555
PWFRR +LN LP LKKL FNAFWY+HHLFVIVY+L + HGY+LYL++ W+ +TTWMYL
Sbjct: 511 PWFRRGKLNYLPGPLKKLASFNAFWYTHHLFVIVYILLVAHGYYLYLTRDWHNKTTWMYL 570
Query: 556 AVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAA 615
VPV+LYACERLIRAFRS K+V I KVAVYPGNVLA+ +S+PQ FKY SGQY+FVNCAA
Sbjct: 571 VVPVVLYACERLIRAFRSSIKAVTIRKVAVYPGNVLAIHLSRPQNFKYKSGQYMFVNCAA 630
Query: 616 VSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQA 675
VS F+WHPFSITSAP DDYLS+HIR LGDWT LK +F++VC+PP SGLLRAD+
Sbjct: 631 VSPFEWHPFSITSAPQDDYLSVHIRVLGDWTRALKGVFSEVCKPPPAGVSGLLRADMLHG 690
Query: 676 DNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEG 735
N P PK+LIDGPYGAPAQDYK Y+V+LLVGLGIGATP+ISI+KD++NNIK +++ +
Sbjct: 691 ANNPDFPKVLIDGPYGAPAQDYKKYEVVLLVGLGIGATPMISIVKDIVNNIKAKEQAQLN 750
Query: 736 ITEDGGAT-KNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCT 794
E+G + + SKK+ F T+RAYFYWVTREQGSF+WF+ +MNEVAE D + VIE+HNYCT
Sbjct: 751 RMENGTSEPQRSKKESFRTRRAYFYWVTREQGSFDWFKNIMNEVAERDANRVIEMHNYCT 810
Query: 795 SVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVG 854
SVYEEGDARSALI MLQS++HAKNG+DIVSGTRV +HFA+PNWR V+K +A+ H + +VG
Sbjct: 811 SVYEEGDARSALIHMLQSLNHAKNGVDIVSGTRVMSHFAKPNWRNVYKRIAMDHPNTKVG 870
Query: 855 VFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
VFYCGAP LT ELR L+ DF+ KT+T+F FHKENF
Sbjct: 871 VFYCGAPALTKELRHLALDFTHKTSTRFSFHKENF 905
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| TAIR|locus:2183309 RBOHA "respiratory burst oxidase homolog A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2618 (926.6 bits), Expect = 7.1e-279, Sum P(2) = 7.1e-279
Identities = 495/798 (62%), Positives = 617/798 (77%)
Query: 103 VSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAV--DGM 160
VS R + K+ R+KS A ALKGLKFITK G GW EVEKRF + + +G+
Sbjct: 110 VSSSSARKPPRPQLAKLRRSKSRAELALKGLKFITKTDGVTGWPEVEKRFYVMTMTTNGL 169
Query: 161 LPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLET 220
L +S FG+CIGM +S +FA LFDALARR ++ SI +EL+ FW+QITDQ FD+RL T
Sbjct: 170 LHRSRFGECIGM-KSTEFALALFDALARRENVSGDSININELKEFWKQITDQDFDSRLRT 228
Query: 221 FFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELY 280
FF MVDK+ DGR+ E EV+EII LSASAN+L I+ + +EYAALIMEELDP++ GYI +
Sbjct: 229 FFAMVDKDSDGRLNEAEVREIITLSASANELDNIRRQADEYAALIMEELDPYHYGYIMIE 288
Query: 281 NLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWV 340
NLE+LLLQAP Q + + LS+MLSQ L+ + RN + CRG+ YF+ DNWKR+WV
Sbjct: 289 NLEILLLQAPMQDVRD-GEGKKLSKMLSQNLMVPQSRNLGARFCRGMKYFLFDNWKRVWV 347
Query: 341 MLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITW 400
M LW+ AGLFTWKF++Y+ R+ + VMG CV AKGAAETLK NMA+ILLPVCRNTITW
Sbjct: 348 MALWIGAMAGLFTWKFMEYRKRSAYEVMGVCVCIAKGAAETLKLNMAMILLPVCRNTITW 407
Query: 401 LRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPF 460
LR++TKL +VPFDD++NFHKVIA+GI++GVG+HA +HL CDFPRL+ A +++YEPM+ +
Sbjct: 408 LRTKTKLSAIVPFDDSLNFHKVIAIGISVGVGIHATSHLACDFPRLIAADEDQYEPMEKY 467
Query: 461 FGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFW 520
FG + Y FV+ EG TG+ MVVLM I++TLA WFRRN+LNLP LKK+TGFNAFW
Sbjct: 468 FGP-QTKRYLDFVQSVEGVTGIGMVVLMTIAFTLATTWFRRNKLNLPGPLKKITGFNAFW 526
Query: 521 YSHHLFVIVYVLFIIHGYFLYLS-KKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVR 579
YSHHLFVIVY L ++HG+++YL + WYK+TTWMYL VPV+LY CERLIRAFRS ++V
Sbjct: 527 YSHHLFVIVYSLLVVHGFYVYLIIEPWYKKTTWMYLMVPVVLYLCERLIRAFRSSVEAVS 586
Query: 580 ILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHI 639
+LKVAV PGNVL+L +S+P F+Y SGQY+++NC+AVS +WHPFSITSAPGDDYLS+HI
Sbjct: 587 VLKVAVLPGNVLSLHLSRPSNFRYKSGQYMYLNCSAVSTLEWHPFSITSAPGDDYLSVHI 646
Query: 640 RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKD 699
R LGDWT QL+S+F++VC+P D+ L RAD D P P++LIDGPYGAPAQDYK
Sbjct: 647 RVLGDWTKQLRSLFSEVCKPRPPDEHRLNRADSKHWDYIPDFPRILIDGPYGAPAQDYKK 706
Query: 700 YDVLLLVGLGIGATPLISIIKDVLNNIK--------QQKEIEEGITEDGGATKNSKKKPF 751
++V+LLVGLGIGATP+ISI+ D++NN+K +Q I +T + + K + F
Sbjct: 707 FEVVLLVGLGIGATPMISIVSDIINNLKGVEEGSNRRQSPIHNMVTPP--VSPSRKSETF 764
Query: 752 ATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQ 811
TKRAYFYWVTREQGSF+WF+ VM+EV E D+ VIELHNYCTSVYEEGDARSALITMLQ
Sbjct: 765 RTKRAYFYWVTREQGSFDWFKNVMDEVTETDRKNVIELHNYCTSVYEEGDARSALITMLQ 824
Query: 812 SIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLS 871
S++HAK+G+D+VSGTRV +HFARPNWR+VFK +AV H RVGVFYCGA GL ELR LS
Sbjct: 825 SLNHAKHGVDVVSGTRVMSHFARPNWRSVFKRIAVNHPKTRVGVFYCGAAGLVKELRHLS 884
Query: 872 QDFSRKTTTKFDFHKENF 889
DFS KT+TKF FHKENF
Sbjct: 885 LDFSHKTSTKFIFHKENF 902
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| TAIR|locus:2117258 AT4G25090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2551 (903.1 bits), Expect = 3.5e-265, P = 3.5e-265
Identities = 476/790 (60%), Positives = 617/790 (78%)
Query: 107 LKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAV--DGMLPKS 164
L ++ + ++DR+KS A +ALKGLK I+K G W VEKR+ ++ DG+L +S
Sbjct: 69 LTMVSGESKAPRLDRSKSTAGQALKGLKIISKTDGNAAWTVVEKRYLKITANTDGLLLRS 128
Query: 165 SFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDM 224
FG+CIGMN SK+FA ELFDALAR+ L IT++EL+ FWEQI D+SFD+RL TFFD+
Sbjct: 129 KFGECIGMN-SKEFALELFDALARKSHLKGDVITETELKKFWEQINDKSFDSRLITFFDL 187
Query: 225 VDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEM 284
+DK+ DGR+TE+EV+EII LS+SAN LS IQ + +EYAA+IMEELDP ++GYI + +L+
Sbjct: 188 MDKDSDGRLTEDEVREIIKLSSSANHLSCIQNKADEYAAMIMEELDPDHMGYIMMESLKK 247
Query: 285 LLLQAPSQSANLLTDS---RVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVM 341
LLLQA ++S + +S + LS ML++ L PT+D N +++ L +FV D+W+R+WV+
Sbjct: 248 LLLQAETKSVSTDINSEERKELSDMLTESLKPTRDPNHLRRWYCQLRFFVLDSWQRVWVI 307
Query: 342 LLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWL 401
LWL+I A LF +K+IQYK+RAV+ V+G CV AKGAAETLK NMALILLPVCRNTITWL
Sbjct: 308 ALWLTIMAILFAYKYIQYKNRAVYEVLGPCVCLAKGAAETLKLNMALILLPVCRNTITWL 367
Query: 402 RSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFF 461
R++T+LG VPFDDN+NFHKVIAVGIAIGV +H+ +HL CDFP L+ AT EY P+ FF
Sbjct: 368 RNKTRLGVFVPFDDNLNFHKVIAVGIAIGVAIHSVSHLACDFPLLIAATPAEYMPLGKFF 427
Query: 462 GDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLN--LPKILKKLTGFNAF 519
G+++P Y FVK TEG TG+VMV LM I++TLA PWFRR +L LP LKKL FNAF
Sbjct: 428 GEEQPKRYLHFVKSTEGITGLVMVFLMVIAFTLAMPWFRRGKLEKKLPGPLKKLASFNAF 487
Query: 520 WYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVR 579
WY+HHLFVIVY+L ++HGY++YL+K+WYK+TTWMYLAVPV LYA ERLIRAFRS ++V+
Sbjct: 488 WYTHHLFVIVYILLVLHGYYIYLNKEWYKKTTWMYLAVPVALYAYERLIRAFRSSIRTVK 547
Query: 580 ILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHI 639
+LK+A YPG VL LQMSKP FKY SGQY+FVNC AVS F+WHPFSITS P DDYLS+HI
Sbjct: 548 VLKMAAYPGKVLTLQMSKPTNFKYMSGQYMFVNCPAVSPFEWHPFSITSTPQDDYLSVHI 607
Query: 640 RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKD 699
+ LGDWT ++ +F++V +PP V D+ N PR PK++IDGPYGAPAQDYK
Sbjct: 608 KALGDWTEAIQGVFSEVSKPPPV-------GDMLNGANSPRFPKIMIDGPYGAPAQDYKK 660
Query: 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFY 759
Y+V+LL+GLGIGATP+ISIIKD++NN + ++++ + + + + K+ F T+RAYFY
Sbjct: 661 YEVVLLIGLGIGATPMISIIKDIINNTETKEQLSQ-MEKGSPQEQQGNKETFKTRRAYFY 719
Query: 760 WVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNG 819
WVT+EQG+F+WF+ +MNE+AE D+ VIELHN+CTSVYEEGD RSALI MLQS+++AKNG
Sbjct: 720 WVTKEQGTFDWFKNIMNEIAERDKSKVIELHNHCTSVYEEGDVRSALIRMLQSLNYAKNG 779
Query: 820 LDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTT 879
LDIV+GTRV +HFARPNW+ V+K +A+ H VGVFYCGAP LT ELR+L+ +F+ KT+
Sbjct: 780 LDIVAGTRVMSHFARPNWKNVYKQIAMDHPGANVGVFYCGAPVLTKELRQLALEFTHKTS 839
Query: 880 TKFDFHKENF 889
T+F FHKENF
Sbjct: 840 TRFSFHKENF 849
|
|
| TAIR|locus:2024603 RBOH F "respiratory burst oxidase protein F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2534 (897.1 bits), Expect = 2.2e-263, P = 2.2e-263
Identities = 504/891 (56%), Positives = 626/891 (70%)
Query: 10 SLSETGSTTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEITLDVRDDSVSV 69
+++ G + G P+S + T K+ SS + +F E E + S
Sbjct: 66 AINVIGDISDDNTGIMTPVSISR-SPTMKRTSSNRFRQFSQ--ELKAEAVAKAKQLS--- 119
Query: 70 QNIRGGDSETAFLASRLERKPXXXXXXXXXXXQVSQELKRMASSKRFDKVDRTKSGAARA 129
Q ++ +F + V+ L+ A K+ ++DRT+S A RA
Sbjct: 120 QELKRFSWSRSFSGNLTTTSTAANQSGGAGGGLVNSALEARALRKQRAQLDRTRSSAQRA 179
Query: 130 LKGLKFIT-KNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALAR 188
L+GL+FI+ K +GW +V+ F++ +G + +S F QCIGM +SK+FA ELFDAL+R
Sbjct: 180 LRGLRFISNKQKNVDGWNDVQSNFEKFEKNGYIYRSDFAQCIGMKDSKEFALELFDALSR 239
Query: 189 RRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASA 248
RR L I EL +W QI D+SFD+RL+ FFD+VDKN DGRITEEEVKEII LSASA
Sbjct: 240 RRRLKVEKINHDELYEYWSQINDESFDSRLQIFFDIVDKNEDGRITEEEVKEIIMLSASA 299
Query: 249 NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLS 308
NKLS+++E+ EEYAALIMEELDP LGYIEL+ LE LLLQ + N SQ LS
Sbjct: 300 NKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTY-LNYSQALSYTSQALS 358
Query: 309 QRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVM 368
Q L + ++ I + Y +Q+NWKRIWV+ LW+ I GLF WKF QYK + FHVM
Sbjct: 359 QNLQGLRGKSRIHRMSSDFVYIMQENWKRIWVLSLWIMIMIGLFLWKFFQYKQKDAFHVM 418
Query: 369 GYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIA 428
GYC+ TAKGAAETLKFNMALIL PVCRNTITWLRS T+L VPFDDNINFHK IA I
Sbjct: 419 GYCLLTAKGAAETLKFNMALILFPVCRNTITWLRS-TRLSYFVPFDDNINFHKTIAGAIV 477
Query: 429 IGVGLHAGAHLTCDFPRLLHATDEEYEP-MKPFFGDDRPDDYWWFVKGTEGWTGVVMVVL 487
+ V LH G HL CDFPR++ AT+ +Y + +F +P Y+ VKG EG TG++MV+L
Sbjct: 478 VAVILHIGDHLACDFPRIVRATEYDYNRYLFHYFQTKQPT-YFDLVKGPEGITGILMVIL 536
Query: 488 MAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWY 547
M IS+TLA WFRRN + LPK +LTGFNAFWYSHHLFVIVY+L I+HG FLY +K WY
Sbjct: 537 MIISFTLATRWFRRNLVKLPKPFDRLTGFNAFWYSHHLFVIVYILLILHGIFLYFAKPWY 596
Query: 548 KRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQ 607
RTTWMYLAVPVLLY ER +R FRSG SVR+LKVA+YPGNVL LQMSKP F+Y SGQ
Sbjct: 597 VRTTWMYLAVPVLLYGGERTLRYFRSGSYSVRLLKVAIYPGNVLTLQMSKPTQFRYKSGQ 656
Query: 608 YIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGL 667
Y+FV C AVS F+WHPFSITSAP DDY+SIHIR LGDWT +LK +F++VC+PP +SGL
Sbjct: 657 YMFVQCPAVSPFEWHPFSITSAPEDDYISIHIRQLGDWTQELKRVFSEVCEPPVGGKSGL 716
Query: 668 LRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK 727
LRAD + +PKLLIDGPYGAPAQDY+ YDVLLLVGLGIGATP ISI+KD+LNNI
Sbjct: 717 LRAD---ETTKKSLPKLLIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIV 773
Query: 728 QQKEIEEGITEDGGATKNS---------KKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778
+ +E + I++ +++ S +K+ T AYFYWVTREQGSF+WF+GVMNEV
Sbjct: 774 KMEEHADSISDFSRSSEYSTGSNGDTPRRKRILKTTNAYFYWVTREQGSFDWFKGVMNEV 833
Query: 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWR 838
AE DQ GVIE+HNY TSVYEEGDARSALITM+Q+++HAKNG+DIVSGTRV+THFARPNW+
Sbjct: 834 AELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWK 893
Query: 839 TVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
V ++ KH + R+GVFYCG P L EL +L F++K +TKF+FHKE+F
Sbjct: 894 KVLTKLSSKHCNARIGVFYCGVPVLGKELSKLCNTFNQKGSTKFEFHKEHF 944
|
|
| TAIR|locus:2128248 AT4G11230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2254 (798.5 bits), Expect = 1.0e-233, P = 1.0e-233
Identities = 464/811 (57%), Positives = 565/811 (69%)
Query: 104 SQELKRMASSKRFDKVDRTKSGAARALKGLKFIT-KNVGTEGWGEVEKRFDELAVDGMLP 162
S L R A S+R + +R SG RA+ GLKFI+ K G W +V+ F L+ DG L
Sbjct: 144 SVNLPR-ALSQRPTRPNRDGSGTERAIHGLKFISSKENGIVDWNDVQNNFAHLSKDGYLF 202
Query: 163 KSSFGQCIGM-NE-SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLET 220
KS F CIG+ NE SK+FA ELFDAL RRR + I EL FW QITD+SFD+RL+
Sbjct: 203 KSDFAHCIGLENENSKEFADELFDALCRRRRIMVDKINLQELYEFWYQITDESFDSRLQI 262
Query: 221 FFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNL--GYIE 278
FF+MV KN DGRITE EVKEII LSASAN LS+++ER EEYAALIMEEL P L YIE
Sbjct: 263 FFNMV-KNGDGRITENEVKEIIILSASANNLSRLRERAEEYAALIMEELAPDGLYSQYIE 321
Query: 279 LYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRI 338
L +LE+LLL+ + L S+ S+ LSQ L KDR + R L Y +QDNWKRI
Sbjct: 322 LKDLEILLLEKDISHSYSLPFSQT-SRALSQNL---KDRR--WRMSRNLLYSLQDNWKRI 375
Query: 339 WVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTI 398
WV+ LW I A LF WK QYKH+ FHVMGYC+ AKGAAETLKFNMALILLPVCRNTI
Sbjct: 376 WVLTLWFVIMAWLFMWKCYQYKHKDAFHVMGYCLVMAKGAAETLKFNMALILLPVCRNTI 435
Query: 399 TWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEP-M 457
T+LRS T L VPFDD INFHK I+V I + LHA +HL CDFPR+L +TD +Y+ +
Sbjct: 436 TYLRS-TALSHSVPFDDCINFHKTISVAIISAMLLHATSHLACDFPRILASTDTDYKRYL 494
Query: 458 KPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFN 517
+FG RP Y+ V G TG++MV M I++TLA RRN LPK KLTG+N
Sbjct: 495 VKYFGVTRPT-YFGLVNTPVGITGIIMVAFMLIAFTLASRRCRRNLTKLPKPFDKLTGYN 553
Query: 518 AFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKS 577
AFWYSHHL + VYVL +IHG LYL KWY++T WMYLAVPVLLY ER+ R FRS +
Sbjct: 554 AFWYSHHLLLTVYVLLVIHGVSLYLEHKWYRKTVWMYLAVPVLLYVGERIFRFFRSRLYT 613
Query: 578 VRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSI 637
V I KV +YPGNV+ L+MSKP F Y SGQY+FV C +VS+F+WHPFSITS+PGDDYLSI
Sbjct: 614 VEICKVVIYPGNVVVLRMSKPTSFDYKSGQYVFVQCPSVSKFEWHPFSITSSPGDDYLSI 673
Query: 638 HIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY 697
HIR GDWT +K F+ VC P +SGLLRAD+ N+ P+LLIDGPYGAPAQD+
Sbjct: 674 HIRQRGDWTEGIKKAFSVVCHAPEAGKSGLLRADV---PNQRSFPELLIDGPYGAPAQDH 730
Query: 698 KDYDVLLLVGLGIGATPLISIIKDVLNNI-KQQKEIE--------EGITEDGG-ATKNSK 747
YDV+LLVGLGIGATP +SI++D+LNNI KQQ++ E I+ D + NS+
Sbjct: 731 WKYDVVLLVGLGIGATPFVSILRDLLNNIIKQQEQAECISGSCSNSNISSDHSFSCLNSE 790
Query: 748 ---------KKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYE 798
+K TK AYFYWVTREQGSF+WF+ +MNE+A+ D+ GVIE+HNY TSVYE
Sbjct: 791 AASRIPQTQRKTLNTKNAYFYWVTREQGSFDWFKEIMNEIADSDRKGVIEMHNYLTSVYE 850
Query: 799 EGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858
EGD RS L+TM+Q+++HAKNG+DI SGT+V+THF RP W+ V ++ KH + R+GVFYC
Sbjct: 851 EGDTRSNLLTMIQTLNHAKNGVDIFSGTKVRTHFGRPKWKKVLSKISTKHRNARIGVFYC 910
Query: 859 GAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889
G P L EL L +F++ T+FDFHKE F
Sbjct: 911 GVPSLGKELSTLCHEFNQTGITRFDFHKEQF 941
|
|
| TAIR|locus:2168113 AT5G60010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2072 (734.4 bits), Expect = 2.0e-214, P = 2.0e-214
Identities = 405/796 (50%), Positives = 542/796 (68%)
Query: 118 KVDRTKSGAARALKGLKFITKNV-GTE--GWGEVEKRFDELAVDGMLPKSSFGQCIGMNE 174
+V+RT S AAR L+ L+F+ + V G E W +E RF++ +VDG LPK FG CIGM +
Sbjct: 96 RVERTTSSAARGLQSLRFLDRTVTGRERDAWRSIENRFNQFSVDGKLPKEKFGVCIGMGD 155
Query: 175 SKDFASELFDALARRRGL-TSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRI 233
+ +FA+E+++AL RRR + T + I K +L+ FWE + + D RL+ FFDM DKN DG++
Sbjct: 156 TMEFAAEVYEALGRRRQIETENGIDKEQLKLFWEDMIKKDLDCRLQIFFDMCDKNGDGKL 215
Query: 234 TEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQS 293
TEEEVKE+I LSASAN+L +++ YA+LIMEELDP + GYIE++ LE+LL
Sbjct: 216 TEEEVKEVIVLSASANRLGNLKKNAAAYASLIMEELDPDHKGYIEMWQLEILLT---GMV 272
Query: 294 ANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFT 353
N T+ SQ L++ ++P + R P+ K + + +NWK++WV+ LW I LF
Sbjct: 273 TNADTEKMKKSQTLTRAMIPERYRTPMSKYVSVTAELMHENWKKLWVLALWAIINVYLFM 332
Query: 354 WKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPF 413
WK+ ++ ++++ G CV AKGAAETLK NMALIL+PVCR T+T LRS T L +VVPF
Sbjct: 333 WKYEEFMRNPLYNITGRCVCAAKGAAETLKLNMALILVPVCRKTLTILRS-TFLNRVVPF 391
Query: 414 DDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMK-PFFGDDRPDDYWWF 472
DDNINFHKVIA IA LH H+ C++PRL + + + G+ +P Y
Sbjct: 392 DDNINFHKVIAYMIAFQALLHTALHIFCNYPRLSSCSYDVFLTYAGAALGNTQPS-YLGL 450
Query: 473 VKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVL 532
+ + TGV+M+ M S+TLA +FRRN + LPK L GFNAFWY+HHL V+ Y+L
Sbjct: 451 MLTSVSITGVLMIFFMGFSFTLAMHYFRRNIVKLPKPFNVLAGFNAFWYAHHLLVLAYIL 510
Query: 533 FIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLI-RAFRSGYKSVRILKVAVYPGNVL 591
IIHGY+L + K WY++TTWMYLAVP+L YA ERL R + V ++K VY GNVL
Sbjct: 511 LIIHGYYLIIEKPWYQKTTWMYLAVPMLFYASERLFSRLLQEHSHRVNVIKAIVYSGNVL 570
Query: 592 ALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKS 651
AL ++KP GFKY SG Y+FV C +S+F+WHPFSITSAPGDDYLS+HIR LGDWT++L+S
Sbjct: 571 ALYVTKPPGFKYKSGMYMFVKCPDLSKFEWHPFSITSAPGDDYLSVHIRALGDWTTELRS 630
Query: 652 IFAKVCQPPSV----DQSGLLRADIGQADNRPRI-------PKLLIDGPYGAPAQDYKDY 700
FAK C+P + L+R + A P I PK+ I GPYGAPAQ+Y+ +
Sbjct: 631 RFAKTCEPTQAAAKPKPNSLMRMETRAAGVNPHIEESQVLFPKIFIKGPYGAPAQNYQKF 690
Query: 701 DVLLLVGLGIGATPLISIIKDVLNNIK-------QQKEIEEGITEDGGATKNSKKKPFAT 753
D+LLLVGLGIGATP ISI+KD+LN++K Q+ E G GG + +
Sbjct: 691 DILLLVGLGIGATPFISILKDMLNHLKPGIPRSGQKYEGSVGGESIGGDSVSGGGGKKFP 750
Query: 754 KRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSI 813
+RAYF+WVTREQ SF+WF+GVM+++AEYD+ VIE+HNY TS+YE GDARSALI M+Q +
Sbjct: 751 QRAYFFWVTREQASFDWFKGVMDDIAEYDKTHVIEMHNYLTSMYEAGDARSALIAMVQKL 810
Query: 814 HHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQD 873
HAKNG+DIVS +R++THFARPNWR VF ++ KH R+GVFYCG+P L L+ L Q+
Sbjct: 811 QHAKNGVDIVSESRIRTHFARPNWRKVFSELSSKHEACRIGVFYCGSPTLVRPLKELCQE 870
Query: 874 FSRKTTTKFDFHKENF 889
FS +++T+F FHKENF
Sbjct: 871 FSLESSTRFTFHKENF 886
|
|
| TAIR|locus:2077192 AT3G45810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1556 (552.8 bits), Expect = 2.8e-211, Sum P(2) = 2.8e-211
Identities = 302/625 (48%), Positives = 419/625 (67%)
Query: 118 KVDRTKSGAARALKGLKFITKNV-GTE--GWGEVEKRFDELAVDGMLPKSSFGQCIGMNE 174
+V+RT S AAR L+ L+F+ + V G E W +E RF++ AVDG LPK FG CIGM +
Sbjct: 106 RVERTTSSAARGLQSLRFLDRTVTGRERDSWRSIENRFNQFAVDGRLPKDKFGVCIGMGD 165
Query: 175 SKDFASELFDALARRRGL-TSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRI 233
+ +FA+++++AL RRR + T + I K +L+ FWE + + D RL+ FFDM DK+ DG++
Sbjct: 166 TLEFAAKVYEALGRRRQIKTENGIDKEQLKLFWEDMIKKDLDCRLQIFFDMCDKDGDGKL 225
Query: 234 TEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQS 293
TEEEVKE+I LSASAN+L +++ YA+LIMEELDP+ GYIE++ LE+LL S +
Sbjct: 226 TEEEVKEVIVLSASANRLVNLKKNAASYASLIMEELDPNEQGYIEMWQLEVLLTGIVSNA 285
Query: 294 ANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFT 353
+ + SQ L++ ++P + R P K + + ++WK+IWV+ LWL++ LF
Sbjct: 286 DSHKVVRK--SQQLTRAMIPKRYRTPTSKYVVVTAELMYEHWKKIWVVTLWLAVNVVLFM 343
Query: 354 WKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPF 413
WK+ ++ ++++ G C+ AKG AE LK NMALIL+PV R T+T+LRS T L ++PF
Sbjct: 344 WKYEEFTTSPLYNITGRCLCAAKGTAEILKLNMALILVPVLRRTLTFLRS-TFLNHLIPF 402
Query: 414 DDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKP-FFGDDRPDDYWWF 472
DDNINFHK+IAV IA+ LH H+ C++PRL Y G +P Y
Sbjct: 403 DDNINFHKLIAVAIAVISLLHTALHMLCNYPRLSSCPYNFYSDYAGNLLGAKQPT-YLGL 461
Query: 473 VKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVL 532
+ TGV+M++ M IS+TLA +FRRN + LP +L GFN+FWY+HHL VI Y L
Sbjct: 462 MLTPVSVTGVLMIIFMGISFTLAMHYFRRNIVKLPIPFNRLAGFNSFWYAHHLLVIAYAL 521
Query: 533 FIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLA 592
IIHGY L + K WY++TTWMY+A+P++LYA ERL + V I+K VY GNVLA
Sbjct: 522 LIIHGYILIIEKPWYQKTTWMYVAIPMVLYASERLFSRVQEHNHRVHIIKAIVYSGNVLA 581
Query: 593 LQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSI 652
L M+KPQGFKY SG Y+FV C +S+F+WHPFSITSAPGD+YLS+HIR LGDWTS+L++
Sbjct: 582 LYMTKPQGFKYKSGMYMFVKCPDISKFEWHPFSITSAPGDEYLSVHIRALGDWTSELRNR 641
Query: 653 FAKVCQPPSVDQ---SGLLRADIGQADNRPRI-------PKLLIDGPYGAPAQDYKDYDV 702
FA+ C+P + + L+R + P + P++ I GPYGAPAQ Y+ +D+
Sbjct: 642 FAETCEPHQKSKPSPNDLIRMETRARGANPHVEESQALFPRIFIKGPYGAPAQSYQKFDI 701
Query: 703 LLLVGLGIGATPLISIIKDVLNNIK 727
LLL+GLGIGATP ISI+KD+LNN+K
Sbjct: 702 LLLIGLGIGATPFISILKDMLNNLK 726
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2HXL0 | RBOHC_SOLTU | 1, ., 6, ., 3, ., - | 0.6333 | 0.9797 | 0.9285 | N/A | no |
| Q948T9 | RBOHB_SOLTU | 1, ., 6, ., 3, ., - | 0.7789 | 0.9730 | 0.9976 | N/A | no |
| Q5ZAJ0 | RBOHB_ORYSJ | 1, ., 6, ., 3, ., - | 0.6598 | 0.9606 | 0.9436 | yes | no |
| Q9SBI0 | RBOHB_ARATH | 1, ., 6, ., 3, ., - | 0.7058 | 0.9268 | 0.9774 | yes | no |
| Q6J2K5 | RBOHB_ORYSI | 1, ., 6, ., 3, ., - | 0.6598 | 0.9606 | 0.9436 | N/A | no |
| Q2HXK9 | RBOHD_SOLTU | 1, ., 6, ., 3, ., - | 0.6192 | 0.9325 | 0.9662 | N/A | no |
| Q948U0 | RBOHA_SOLTU | 1, ., 6, ., 3, ., - | 0.5506 | 0.9628 | 0.8888 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 889 | |||
| pfam08030 | 149 | pfam08030, NAD_binding_6, Ferric reductase NAD bin | 2e-54 | |
| pfam08414 | 96 | pfam08414, NADPH_Ox, Respiratory burst NADPH oxida | 8e-54 | |
| cd06186 | 210 | cd06186, NOX_Duox_like_FAD_NADP, NADPH oxidase (NO | 1e-42 | |
| pfam08022 | 103 | pfam08022, FAD_binding_8, FAD-binding domain | 6e-37 | |
| PLN02844 | 722 | PLN02844, PLN02844, oxidoreductase/ferric-chelate | 8e-29 | |
| PLN02292 | 702 | PLN02292, PLN02292, ferric-chelate reductase | 6e-22 | |
| PLN02631 | 699 | PLN02631, PLN02631, ferric-chelate reductase | 9e-22 | |
| pfam01794 | 122 | pfam01794, Ferric_reduct, Ferric reductase like tr | 6e-14 | |
| cd00322 | 223 | cd00322, FNR_like, Ferredoxin reductase (FNR), an | 1e-12 | |
| cd06198 | 216 | cd06198, FNR_like_3, NAD(P) binding domain of ferr | 2e-12 | |
| COG4097 | 438 | COG4097, COG4097, Predicted ferric reductase [Inor | 2e-09 | |
| cd06221 | 253 | cd06221, sulfite_reductase_like, Anaerobic sulfite | 6e-08 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 1e-06 | |
| cd06196 | 218 | cd06196, FNR_like_1, Ferredoxin reductase-like pro | 4e-06 | |
| COG0543 | 252 | COG0543, UbiB, 2-polyprenylphenol hydroxylase and | 1e-04 | |
| cd06187 | 224 | cd06187, O2ase_reductase_like, The oxygenase reduc | 2e-04 | |
| cd06194 | 222 | cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulf | 6e-04 | |
| cd06214 | 241 | cd06214, PA_degradation_oxidoreductase_like, NAD(P | 0.001 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 0.001 | |
| COG1018 | 266 | COG1018, Hmp, Flavodoxin reductases (ferredoxin-NA | 0.002 | |
| cd06189 | 224 | cd06189, flavin_oxioreductase, NAD(P)H dependent f | 0.002 |
| >gnl|CDD|203841 pfam08030, NAD_binding_6, Ferric reductase NAD binding domain | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 2e-54
Identities = 70/176 (39%), Positives = 90/176 (51%), Gaps = 31/176 (17%)
Query: 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFY 759
Y+ +LLV GIG TP ISI+KD+ N K TK+ FY
Sbjct: 1 YENVLLVAGGIGITPFISILKDLGNKSK----------------------ALKTKKIKFY 38
Query: 760 WVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSAL----ITMLQSIHH 815
W R+ S EWF+ V+NE+ E + G IE+H Y T YE DA A I+M S +H
Sbjct: 39 WAVRDLSSLEWFKDVLNELEELKELGNIEIHIYLTGEYEAEDASDASDSEQISMFDSKNH 98
Query: 816 AKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLS 871
+ GTRV+ HF RPNW+ V K +A +H + +GVF CG P L ELR L
Sbjct: 99 EEIS-----GTRVEFHFGRPNWKEVLKDIAKQHPNNSIGVFCCGPPSLVDELRNLV 149
|
Length = 149 |
| >gnl|CDD|203934 pfam08414, NADPH_Ox, Respiratory burst NADPH oxidase | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 8e-54
Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
Query: 122 TKSGAARALKGLKFITKNVGT-EGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFAS 180
TKS AARALKGLKFI+K G +GW EVEKRFD+LAVDG LP+S FG+CIGMN+SK+FA
Sbjct: 1 TKSSAARALKGLKFISKTDGGVDGWNEVEKRFDKLAVDGYLPRSKFGECIGMNDSKEFAL 60
Query: 181 ELFDALARRRGLTSSSITKSELRGFWEQITDQSFDA 216
ELFDALARRR + SITK EL+ FWEQITDQSFD+
Sbjct: 61 ELFDALARRRRIKVDSITKEELKEFWEQITDQSFDS 96
|
This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N-terminus of an EF-hand (pfam00036), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants. Length = 96 |
| >gnl|CDD|99783 cd06186, NOX_Duox_like_FAD_NADP, NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 1e-42
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 53/258 (20%)
Query: 580 ILKVAVYP-GNVLALQMSKPQGFKYTSGQYIFVNCAAV-SQFQWHPFSITSAPGD--DYL 635
I V + P +V+ L + KP+ FK+ GQ++++N ++ S +Q HPF+I S+P D D L
Sbjct: 1 IATVELLPDSDVIRLTIPKPKPFKWKPGQHVYLNFPSLLSFWQSHPFTIASSPEDEQDTL 60
Query: 636 SIHIRTL-GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694
S+ IR G T L ++ K+L++GPYG+ +
Sbjct: 61 SLIIRAKKGFTTR--------------------LLRKALKSPGGGVSLKVLVEGPYGSSS 100
Query: 695 QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATK 754
+D YD +LLV G G T ++ I++D+L K T+
Sbjct: 101 EDLLSYDNVLLVAGGSGITFVLPILRDLLRRS---------------------SKTSRTR 139
Query: 755 RAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814
R WV R++ EWF + E + DG IE+ Y T V G ++ +
Sbjct: 140 RVKLVWVVRDREDLEWFLDELRAAQELEVDGEIEI--YVTRVVVCGPP-----GLVDDVR 192
Query: 815 HAKNGLDIVSGTRVKTHF 832
+A + F
Sbjct: 193 NAVAKKGGTGVEFHEESF 210
|
ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation. Length = 210 |
| >gnl|CDD|219702 pfam08022, FAD_binding_8, FAD-binding domain | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 6e-37
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 19/121 (15%)
Query: 575 YKSVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD 633
V KV++ P NV+ L +SKP+ FKY GQYIF+N +S Q HPF+ITSAP DD
Sbjct: 1 IFGVPKAKVSLLPDNVVELIVSKPKKPFKYKPGQYIFINFPPISFLQSHPFTITSAPEDD 60
Query: 634 YLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693
LS+HI+ G WT +L + +N P++LI+GPYG P
Sbjct: 61 KLSVHIKAKGGWTKKLAKYLSSS------------------PENNKDKPRVLIEGPYGPP 102
Query: 694 A 694
+
Sbjct: 103 S 103
|
Length = 103 |
| >gnl|CDD|215453 PLN02844, PLN02844, oxidoreductase/ferric-chelate reductase | Back alignment and domain information |
|---|
Score = 123 bits (309), Expect = 8e-29
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 30/220 (13%)
Query: 505 NLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYAC 564
+LP+I +K F F+Y+HHL+++ + F+ H R +M + L+
Sbjct: 254 SLPQIRRK--RFEIFYYTHHLYIVFLIFFLFHAG---------DRHFYMVFP-GIFLFGL 301
Query: 565 ERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPF 624
++L+R +S ++ IL ++P + L + K G KY IF+ ++S+FQWHPF
Sbjct: 302 DKLLRIVQSRPETC-ILSARLFPCKAIELVLPKDPGLKYAPTSVIFMKIPSISRFQWHPF 360
Query: 625 SITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIP 682
SITS+ D +S+ I+ G WT+ L + L ++ Q + P
Sbjct: 361 SITSSSNIDDHTMSVIIKCEGGWTNSLYNKIQAE-----------LDSETNQMNCIP--- 406
Query: 683 KLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDV 722
+ I+GPYG + D+ YD LLLV GIG TP +SI+K++
Sbjct: 407 -VAIEGPYGPASVDFLRYDSLLLVAGGIGITPFLSILKEI 445
|
Length = 722 |
| >gnl|CDD|215165 PLN02292, PLN02292, ferric-chelate reductase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 6e-22
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 37/220 (16%)
Query: 507 PKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVP-VLLYACE 565
PKI ++ F F+Y+H+L+++ + F+ H ++ ++ P ++ +
Sbjct: 269 PKIRRRF--FEVFFYTHYLYIVFMLFFVFH-----------VGISFALISFPGFYIFLVD 315
Query: 566 RLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFS 625
R +R +S +V+++ V P + + L SK Y+ +FVN ++S+ QWHPF+
Sbjct: 316 RFLRFLQS-RNNVKLVSARVLPCDTVELNFSKNPMLMYSPTSIMFVNIPSISKLQWHPFT 374
Query: 626 ITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPK 683
ITS+ + LS+ I++ G W+++L + + S DQ L
Sbjct: 375 ITSSSKLEPEKLSVMIKSQGKWSTKLYHMLS------SSDQIDRLAVS------------ 416
Query: 684 LLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVL 723
++GPYG + D+ ++ L++V G G TP ISII+D++
Sbjct: 417 --VEGPYGPASTDFLRHESLVMVSGGSGITPFISIIRDLI 454
|
Length = 702 |
| >gnl|CDD|178238 PLN02631, PLN02631, ferric-chelate reductase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 9e-22
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 49/246 (19%)
Query: 481 GVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFL 540
G + +V+ + + P FRR + F F+Y+HHL+ + V ++IH
Sbjct: 236 GTIAMVIGIAMWVTSLPSFRRKK------------FELFFYTHHLYGLYIVFYVIH---- 279
Query: 541 YLSKKWYKRTTWMYLAVP-VLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQ 599
+W + +P + L+ +R +R +S +S R++ + P + L L SK
Sbjct: 280 -------VGDSWFCMILPNIFLFFIDRYLRFLQSTKRS-RLVSARILPSDNLELTFSKTP 331
Query: 600 GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVC 657
G YT +F++ ++S+ QWHPF+ITS+ D LS+ IR G WT +L + +
Sbjct: 332 GLHYTPTSILFLHVPSISKLQWHPFTITSSSNLEKDTLSVVIRRQGSWTQKLYTHLSS-- 389
Query: 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLIS 717
S+D ++ +GPYG + D ++ L+LV G G TP IS
Sbjct: 390 ---SIDSL-----------------EVSTEGPYGPNSFDVSRHNSLILVSGGSGITPFIS 429
Query: 718 IIKDVL 723
+I++++
Sbjct: 430 VIRELI 435
|
Length = 699 |
| >gnl|CDD|216705 pfam01794, Ferric_reduct, Ferric reductase like transmembrane component | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 6e-14
Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 35/150 (23%)
Query: 385 NMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFP 444
+ L+LL RN L T L D + FH+ + + LH +L
Sbjct: 8 LLPLLLLLALRNN--PLEWLTGLS----LDRLLLFHRWLGRLAFLLALLHVILYLV---- 57
Query: 445 RLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRL 504
+ +K GV+ +VL+ + + P RR
Sbjct: 58 --------------LWLRLGGILLLLEKLKRPYILLGVIALVLLLLLAITSLPPLRRRL- 102
Query: 505 NLPKILKKLTGFNAFWYSHHLFVIVYVLFI 534
G+ F Y H L + ++L +
Sbjct: 103 ----------GYELFLYLHILLAVAFLLAL 122
|
This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease. Length = 122 |
| >gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 1e-12
Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 29/132 (21%)
Query: 596 SKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRT--LGDWTSQLKSI 652
P GF + GQY+ ++ + +SI S+P + L + ++ G +++ L
Sbjct: 16 QLPNGFSFKPGQYVDLHLPGDGRGLRRAYSIASSPDEEGELELTVKIVPGGPFSAWLH-- 73
Query: 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGA 712
G ++ + GP G ++ ++L+ GIG
Sbjct: 74 ----------------DLKPGD--------EVEVSGPGGDFFLPLEESGPVVLIAGGIGI 109
Query: 713 TPLISIIKDVLN 724
TP S+++ +
Sbjct: 110 TPFRSMLRHLAA 121
|
FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in many organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one- electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and 2 electron carriers. FNR has a strong preference for NADP(H) vs NAD(H). Length = 223 |
| >gnl|CDD|99795 cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 28/138 (20%)
Query: 585 VYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDY-LSIHIRTLG 643
V P L L+ P + +GQ+ F+ A + HPF+I+SAP D L I+ LG
Sbjct: 6 VRPTTTLTLEPRGPA-LGHRAGQFAFLRFDASGWEEPHPFTISSAPDPDGRLRFTIKALG 64
Query: 644 DWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVL 703
D+T +L R G ++ ++GPYG D + +
Sbjct: 65 DYTRRLAE-----------------RLKPGT--------RVTVEGPYGRFTFDDRRARQI 99
Query: 704 LLVGLGIGATPLISIIKD 721
+ G GIG TP +++++
Sbjct: 100 WIAG-GIGITPFLALLEA 116
|
The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH. Length = 216 |
| >gnl|CDD|226582 COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 33/211 (15%)
Query: 515 GFNAFWYSHHLFVIVYVLFIIHGYFL----YLSKKWYKRTTWMYLAVPVLLYACERLIRA 570
G+ + +H L +VY+L ++H Y L YLS + + +L
Sbjct: 151 GYENWRIAHRLMAVVYILGLLHSYGLLNYLYLSWPAVSWLVIAFALLGLLAAIYSIFGYF 210
Query: 571 FRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAV-SQFQWHPFSITSA 629
RS ++ + L + + + Y +GQ+ F+ + + HPF+I +
Sbjct: 211 GRSFPYLGKVTAPQRGNVDTLEITIGLQGPWLYQAGQFAFLKIEIEEFRMRPHPFTIACS 270
Query: 630 PGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGP 689
L I+ LGD+T LK DN KL +DGP
Sbjct: 271 HEGSELRFSIKALGDFTKTLK-------------------------DNLKVGTKLEVDGP 305
Query: 690 YGAPAQDYKDY-DVLLLVGLGIGATPLISII 719
YG D++ + + + GIG TP IS++
Sbjct: 306 YG--KFDFERGLNTQVWIAGGIGITPFISML 334
|
Length = 438 |
| >gnl|CDD|99817 cd06221, sulfite_reductase_like, Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 6e-08
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 33/145 (22%)
Query: 591 LALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQL 649
L L+ + F + GQ++ ++ V + P SI+S P L + IR +G T
Sbjct: 16 LRLEDDDEELFTFKPGQFVMLSLPGVGEA---PISISSDPTRRGPLELTIRRVGRVTE-- 70
Query: 650 KSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA--PAQDYKDYDVLLLVG 707
L G + + GP+G P ++ K D+LL+ G
Sbjct: 71 ----------------ALHELKPGD--------TVGLRGPFGNGFPVEEMKGKDLLLVAG 106
Query: 708 LGIGATPLISIIKDVLNNIKQQKEI 732
G+G PL S+I +L+N + ++
Sbjct: 107 -GLGLAPLRSLINYILDNREDYGKV 130
|
Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. Length = 253 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-06
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 196 SITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243
+I+ EL+ + + + + ++ VDK+ DG+I EE E++A
Sbjct: 16 TISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|99793 cd06196, FNR_like_1, Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 40/140 (28%)
Query: 589 NVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQW----HPFSITSAPGDDYLSIHIRTLGD 644
+V L+ KP+G+ +T GQ V A+ + W PF+ TS P DD L I++ D
Sbjct: 14 DVKRLRFDKPEGYDFTPGQATEV---AIDKPGWRDEKRPFTFTSLPEDDVLEFVIKSYPD 70
Query: 645 ---WTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYD 701
T QL + Q G LLI+ P+G A +YK
Sbjct: 71 HDGVTEQLGRL-----------QPG---------------DTLLIEDPWG--AIEYKGPG 102
Query: 702 VLLLVGLGIGATPLISIIKD 721
V + G GI TP I+I++D
Sbjct: 103 VFIAGGAGI--TPFIAILRD 120
|
The N-terminal region may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH. Length = 218 |
| >gnl|CDD|223617 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 32/135 (23%)
Query: 601 FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD-YLSIHIR--TLGDWTSQLKSIFAKVC 657
+ GQ++ + V P+S+ SAP D L +HIR +G T +
Sbjct: 34 LTFKPGQFVML---RVPGGVRRPYSLASAPDDKGELELHIRVYEVGKVTKYI-------- 82
Query: 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLIS 717
GL D K+ + GP G K +LL+ G G PL +
Sbjct: 83 -------FGLKEGD-----------KIRVRGPLGNGFLREKIGKPVLLIAGGTGIAPLYA 124
Query: 718 IIKDVLNNIKQQKEI 732
I K++ K
Sbjct: 125 IAKELKEKGDANKVT 139
|
Length = 252 |
| >gnl|CDD|99784 cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 29/136 (21%)
Query: 590 VLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD-YLSIHIRTL-GDWTS 647
V+ LQ+ +P + +GQY+ V W +S + P +D + H+R + G S
Sbjct: 13 VVRLQLDQP--LPFWAGQYVNVT-VPGRPRTWRAYSPANPPNEDGEIEFHVRAVPGGRVS 69
Query: 648 QLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVG 707
++ +G ++ + GPYG +L +
Sbjct: 70 --NALHD--------------ELKVGD--------RVRLSGPYGTFYLRRDHDRPVLCIA 105
Query: 708 LGIGATPLISIIKDVL 723
G G PL +I++D L
Sbjct: 106 GGTGLAPLRAIVEDAL 121
|
Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate, while mono-oxygenases (aka mixed oxygenases) add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate. Length = 224 |
| >gnl|CDD|99791 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 32/136 (23%)
Query: 591 LALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSIHIRTLGDWTSQL 649
+ L+ +P Y GQY+ + A +S TS P GD+ L HIR
Sbjct: 14 VRLEPDRP--LPYLPGQYVNLRRAG---GLARSYSPTSLPDGDNELEFHIR--------- 59
Query: 650 KSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDY--DVLLLVG 707
+P SG L + L + GP+G A +Y LLLVG
Sbjct: 60 -------RKPNGA-FSGWLGEEARPGH------ALRLQGPFG-QAFYRPEYGEGPLLLVG 104
Query: 708 LGIGATPLISIIKDVL 723
G G PL I + L
Sbjct: 105 AGTGLAPLWGIARAAL 120
|
Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. Length = 222 |
| >gnl|CDD|99810 cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 34/131 (25%)
Query: 601 FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHI-RTLGDWTSQLKSIFAKV--- 656
F+Y GQ++ + + +SI S+PGDD L I + R G S + K
Sbjct: 31 FRYRPGQFLTLRVPIDGEEVRRSYSICSSPGDDELRITVKRVPGGRFSNWANDELKAGDT 90
Query: 657 --CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATP 714
PP+ G + P +L G G TP
Sbjct: 91 LEVMPPA--------------------------GRFTLPP-LPGARHYVLFAA-GSGITP 122
Query: 715 LISIIKDVLNN 725
++SI+K L
Sbjct: 123 VLSILKTALAR 133
|
PA oxidoreductases of E. coli hydroxylate PA-CoA in the second step of PA degradation. Members of this group typically fuse a ferredoxin reductase-like domain with an iron-sulfur binding cluster domain. Ferredoxins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal portion may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria and participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. Length = 241 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.001
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIEL 279
++DK+ DG I EE+++++ A L E VEE E+D G I
Sbjct: 1 KLLDKDGDGYIDVEELRKLL----KALGLKLTDEEVEELIEADFNEIDKDGDGRISF 53
|
Length = 60 |
| >gnl|CDD|223949 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 26/154 (16%)
Query: 574 GYKSVRILKVAVYPGNVLALQMSKPQGFK--YTSGQYIFVNCAAVSQFQWHPFSITSAPG 631
G++ V + V +V + + P G + + GQYI V + +S++SAP
Sbjct: 4 GFRRVTVTSVEPETDDVFSFTLEPPDGLRLDFEPGQYITVGLPNGGEPLLRAYSLSSAPD 63
Query: 632 DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG 691
+D R + + S L + D L + P G
Sbjct: 64 EDS---LYR------------ISVKREDGGGG-SNWLHDHLKVGD------TLEVSAPAG 101
Query: 692 A-PAQDYKDYDVLLLVGLGIGATPLISIIKDVLN 724
D + +LLL G GIG TP +S+++ +L+
Sbjct: 102 DFVLDDLPERKLLLLAG-GIGITPFLSMLRTLLD 134
|
Length = 266 |
| >gnl|CDD|99786 cd06189, flavin_oxioreductase, NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.002
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 579 RILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSI 637
++ + +V +++ P + +GQY+ + + PFSI SAP D + +
Sbjct: 2 KVESIEPLNDDVYRVRLKPPAPLDFLAGQYLDLL---LDDGDKRPFSIASAPHEDGEIEL 58
Query: 638 HIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY 697
HIR + + +F + + ++GL+R I+GP G
Sbjct: 59 HIRAVPGGSFSDY-VFEE------LKENGLVR----------------IEGPLGDFFLRE 95
Query: 698 KDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK 730
L+L+ G G P+ SI++ +L ++
Sbjct: 96 DSDRPLILIAGGTGFAPIKSILEHLLAQGSKRP 128
|
Structurally similar to ferredoxin reductases, but with only 15% sequence identity, flavin reductases reduce FAD, FMN, or riboflavin via NAD(P)H. Flavin is used as a substrate, rather than a tightly bound prosthetic group as in flavoenzymes; weaker binding is due to the absence of a binding site for the AMP moeity of FAD. Length = 224 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 889 | |||
| KOG0039 | 646 | consensus Ferric reductase, NADH/NADPH oxidase and | 100.0 | |
| PLN02631 | 699 | ferric-chelate reductase | 100.0 | |
| PLN02292 | 702 | ferric-chelate reductase | 100.0 | |
| PLN02844 | 722 | oxidoreductase/ferric-chelate reductase | 100.0 | |
| COG4097 | 438 | Predicted ferric reductase [Inorganic ion transpor | 100.0 | |
| cd06186 | 210 | NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz | 100.0 | |
| cd06195 | 241 | FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c | 99.94 | |
| cd06197 | 220 | FNR_like_2 FAD/NAD(P) binding domain of ferredoxin | 99.94 | |
| cd06216 | 243 | FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr | 99.94 | |
| cd06189 | 224 | flavin_oxioreductase NAD(P)H dependent flavin oxid | 99.94 | |
| cd06198 | 216 | FNR_like_3 NAD(P) binding domain of ferredoxin red | 99.94 | |
| cd06184 | 247 | flavohem_like_fad_nad_binding FAD_NAD(P)H binding | 99.94 | |
| PRK08051 | 232 | fre FMN reductase; Validated | 99.94 | |
| cd06215 | 231 | FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr | 99.94 | |
| cd06217 | 235 | FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr | 99.94 | |
| cd06191 | 231 | FNR_iron_sulfur_binding Iron-sulfur binding Ferred | 99.94 | |
| cd06213 | 227 | oxygenase_e_transfer_subunit The oxygenase reducta | 99.94 | |
| cd06194 | 222 | FNR_N-term_Iron_sulfur_binding Iron-sulfur binding | 99.93 | |
| cd06190 | 232 | T4MO_e_transfer_like Toluene-4-monoxygenase electr | 99.93 | |
| cd06212 | 232 | monooxygenase_like The oxygenase reductase FAD/NAD | 99.93 | |
| cd06209 | 228 | BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD | 99.93 | |
| cd06210 | 236 | MMO_FAD_NAD_binding Methane monooxygenase (MMO) re | 99.93 | |
| cd06214 | 241 | PA_degradation_oxidoreductase_like NAD(P) binding | 99.93 | |
| cd06187 | 224 | O2ase_reductase_like The oxygenase reductase FAD/N | 99.93 | |
| cd06211 | 238 | phenol_2-monooxygenase_like Phenol 2-monooxygenase | 99.93 | |
| TIGR02160 | 352 | PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, | 99.93 | |
| cd00322 | 223 | FNR_like Ferredoxin reductase (FNR), an FAD and NA | 99.93 | |
| cd06188 | 283 | NADH_quinone_reductase Na+-translocating NADH:quin | 99.93 | |
| PRK10684 | 332 | HCP oxidoreductase, NADH-dependent; Provisional | 99.92 | |
| cd06196 | 218 | FNR_like_1 Ferredoxin reductase-like proteins cata | 99.92 | |
| PRK07609 | 339 | CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat | 99.92 | |
| PRK13289 | 399 | bifunctional nitric oxide dioxygenase/dihydropteri | 99.92 | |
| PRK11872 | 340 | antC anthranilate dioxygenase reductase; Provision | 99.91 | |
| PF08030 | 156 | NAD_binding_6: Ferric reductase NAD binding domain | 99.91 | |
| cd06221 | 253 | sulfite_reductase_like Anaerobic sulfite reductase | 99.91 | |
| PRK00054 | 250 | dihydroorotate dehydrogenase electron transfer sub | 99.91 | |
| cd06183 | 234 | cyt_b5_reduct_like Cytochrome b5 reductase catalyz | 99.91 | |
| PRK10926 | 248 | ferredoxin-NADP reductase; Provisional | 99.91 | |
| cd06218 | 246 | DHOD_e_trans FAD/NAD binding domain in the electro | 99.91 | |
| PRK08345 | 289 | cytochrome-c3 hydrogenase subunit gamma; Provision | 99.91 | |
| COG1018 | 266 | Hmp Flavodoxin reductases (ferredoxin-NADPH reduct | 99.9 | |
| PRK05713 | 312 | hypothetical protein; Provisional | 99.9 | |
| cd06185 | 211 | PDR_like Phthalate dioxygenase reductase (PDR) is | 99.9 | |
| cd06220 | 233 | DHOD_e_trans_like2 FAD/NAD binding domain in the e | 99.9 | |
| cd06219 | 248 | DHOD_e_trans_like1 FAD/NAD binding domain in the e | 99.9 | |
| cd06192 | 243 | DHOD_e_trans_like FAD/NAD binding domain (electron | 99.9 | |
| PRK08221 | 263 | anaerobic sulfite reductase subunit B; Provisional | 99.89 | |
| PLN03116 | 307 | ferredoxin--NADP+ reductase; Provisional | 99.89 | |
| PTZ00274 | 325 | cytochrome b5 reductase; Provisional | 99.89 | |
| PRK05464 | 409 | Na(+)-translocating NADH-quinone reductase subunit | 99.89 | |
| cd06208 | 286 | CYPOR_like_FNR These ferredoxin reductases are rel | 99.89 | |
| PRK06222 | 281 | ferredoxin-NADP(+) reductase subunit alpha; Review | 99.88 | |
| TIGR02911 | 261 | sulfite_red_B sulfite reductase, subunit B. Member | 99.88 | |
| TIGR01941 | 405 | nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo | 99.88 | |
| PRK05802 | 320 | hypothetical protein; Provisional | 99.87 | |
| cd06182 | 267 | CYPOR_like NADPH cytochrome p450 reductase (CYPOR) | 99.87 | |
| cd06200 | 245 | SiR_like1 Cytochrome p450- like alpha subunits of | 99.86 | |
| PTZ00319 | 300 | NADH-cytochrome B5 reductase; Provisional | 99.86 | |
| PLN03115 | 367 | ferredoxin--NADP(+) reductase; Provisional | 99.85 | |
| cd06201 | 289 | SiR_like2 Cytochrome p450- like alpha subunits of | 99.85 | |
| COG0543 | 252 | UbiB 2-polyprenylphenol hydroxylase and related fl | 99.84 | |
| TIGR03224 | 411 | benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p | 99.84 | |
| PF08022 | 105 | FAD_binding_8: FAD-binding domain; InterPro: IPR01 | 99.83 | |
| KOG0534 | 286 | consensus NADH-cytochrome b-5 reductase [Coenzyme | 99.83 | |
| PLN02252 | 888 | nitrate reductase [NADPH] | 99.83 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.79 | |
| PRK12779 | 944 | putative bifunctional glutamate synthase subunit b | 99.79 | |
| PRK12778 | 752 | putative bifunctional 2-polyprenylphenol hydroxyla | 99.78 | |
| cd06193 | 235 | siderophore_interacting Siderophore interacting pr | 99.78 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.76 | |
| PF08414 | 100 | NADPH_Ox: Respiratory burst NADPH oxidase; InterPr | 99.76 | |
| PTZ00306 | 1167 | NADH-dependent fumarate reductase; Provisional | 99.75 | |
| PRK12775 | 1006 | putative trifunctional 2-polyprenylphenol hydroxyl | 99.72 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.67 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.65 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.57 | |
| cd06206 | 384 | bifunctional_CYPOR These bifunctional proteins fus | 99.56 | |
| PTZ00183 | 158 | centrin; Provisional | 99.56 | |
| cd06207 | 382 | CyPoR_like NADPH cytochrome p450 reductase (CYPOR) | 99.54 | |
| cd06199 | 360 | SiR Cytochrome p450- like alpha subunits of E. col | 99.54 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.51 | |
| TIGR01931 | 597 | cysJ sulfite reductase [NADPH] flavoprotein, alpha | 99.5 | |
| PF01794 | 125 | Ferric_reduct: Ferric reductase like transmembrane | 99.43 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.41 | |
| cd06203 | 398 | methionine_synthase_red Human methionine synthase | 99.4 | |
| PRK06214 | 530 | sulfite reductase; Provisional | 99.37 | |
| cd06204 | 416 | CYPOR NADPH cytochrome p450 reductase (CYPOR) serv | 99.36 | |
| COG2871 | 410 | NqrF Na+-transporting NADH:ubiquinone oxidoreducta | 99.36 | |
| cd06202 | 406 | Nitric_oxide_synthase The ferredoxin-reductase (FN | 99.34 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.34 | |
| PF00175 | 109 | NAD_binding_1: Oxidoreductase NAD-binding domain ; | 99.3 | |
| PRK10953 | 600 | cysJ sulfite reductase subunit alpha; Provisional | 99.26 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.14 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.11 | |
| PF00970 | 99 | FAD_binding_6: Oxidoreductase FAD-binding domain; | 99.06 | |
| KOG3378 | 385 | consensus Globins and related hemoproteins [Energy | 99.0 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.0 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 98.97 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 98.96 | |
| PRK06567 | 1028 | putative bifunctional glutamate synthase subunit b | 98.96 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 98.87 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 98.83 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.77 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.72 | |
| PTZ00183 | 158 | centrin; Provisional | 98.71 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.65 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 98.62 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 98.6 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.57 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.56 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.55 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.55 | |
| KOG1158 | 645 | consensus NADP/FAD dependent oxidoreductase [Energ | 98.54 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.53 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 98.52 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.52 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.48 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.47 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.45 | |
| COG0369 | 587 | CysJ Sulfite reductase, alpha subunit (flavoprotei | 98.42 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 98.39 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.36 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 98.28 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 98.28 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.21 | |
| KOG2562 | 493 | consensus Protein phosphatase 2 regulatory subunit | 98.2 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.19 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 98.17 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 98.08 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 97.97 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 97.95 | |
| KOG2643 | 489 | consensus Ca2+ binding protein, contains EF-hand m | 97.94 | |
| PF00036 | 29 | EF-hand_1: EF hand; InterPro: IPR018248 Many calci | 97.93 | |
| PF14658 | 66 | EF-hand_9: EF-hand domain | 97.93 | |
| PRK05419 | 205 | putative sulfite oxidase subunit YedZ; Reviewed | 97.85 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 97.84 | |
| KOG1159 | 574 | consensus NADP-dependent flavoprotein reductase [E | 97.83 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 97.8 | |
| PF00036 | 29 | EF-hand_1: EF hand; InterPro: IPR018248 Many calci | 97.77 | |
| PRK12309 | 391 | transaldolase/EF-hand domain-containing protein; P | 97.67 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 97.65 | |
| KOG0041 | 244 | consensus Predicted Ca2+-binding protein, EF-Hand | 97.61 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 97.6 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 97.6 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 97.58 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 97.57 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 97.56 | |
| COG2717 | 209 | Predicted membrane protein [Function unknown] | 97.55 | |
| PF13405 | 31 | EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J | 97.54 | |
| PF13202 | 25 | EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ | 97.5 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 97.5 | |
| KOG2643 | 489 | consensus Ca2+ binding protein, contains EF-hand m | 97.46 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 97.37 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 97.32 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 97.32 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 97.27 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 97.26 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 97.26 | |
| KOG4065 | 144 | consensus Uncharacterized conserved protein [Funct | 97.2 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 97.16 | |
| PF13202 | 25 | EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ | 97.03 | |
| KOG0040 | 2399 | consensus Ca2+-binding actin-bundling protein (spe | 96.97 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 96.92 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 96.91 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 96.89 | |
| PF12763 | 104 | EF-hand_4: Cytoskeletal-regulatory complex EF hand | 96.77 | |
| PF10591 | 113 | SPARC_Ca_bdg: Secreted protein acidic and rich in | 96.68 | |
| PF14788 | 51 | EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA | 96.66 | |
| KOG4251 | 362 | consensus Calcium binding protein [General functio | 96.5 | |
| KOG4251 | 362 | consensus Calcium binding protein [General functio | 96.46 | |
| PF14788 | 51 | EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QA | 96.37 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 96.19 | |
| PF13405 | 31 | EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J | 96.15 | |
| PF12763 | 104 | EF-hand_4: Cytoskeletal-regulatory complex EF hand | 96.11 | |
| COG2375 | 265 | ViuB Siderophore-interacting protein [Inorganic io | 96.07 | |
| PF14658 | 66 | EF-hand_9: EF-hand domain | 95.88 | |
| PRK12309 | 391 | transaldolase/EF-hand domain-containing protein; P | 95.88 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 95.78 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 95.65 | |
| KOG0040 | 2399 | consensus Ca2+-binding actin-bundling protein (spe | 95.16 | |
| KOG0039 | 646 | consensus Ferric reductase, NADH/NADPH oxidase and | 95.06 | |
| KOG3866 | 442 | consensus DNA-binding protein of the nucleobindin | 94.95 | |
| smart00054 | 29 | EFh EF-hand, calcium binding motif. EF-hands are c | 94.47 | |
| smart00054 | 29 | EFh EF-hand, calcium binding motif. EF-hands are c | 94.38 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 94.22 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 93.83 | |
| KOG0041 | 244 | consensus Predicted Ca2+-binding protein, EF-Hand | 92.95 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 92.23 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 92.21 | |
| KOG0046 | 627 | consensus Ca2+-binding actin-bundling protein (fim | 92.09 | |
| KOG2562 | 493 | consensus Protein phosphatase 2 regulatory subunit | 91.17 | |
| PF09279 | 83 | EF-hand_like: Phosphoinositide-specific phospholip | 90.93 | |
| KOG0035 | 890 | consensus Ca2+-binding actin-bundling protein (act | 90.36 | |
| KOG4347 | 671 | consensus GTPase-activating protein VRP [General f | 90.35 | |
| PF10591 | 113 | SPARC_Ca_bdg: Secreted protein acidic and rich in | 89.66 | |
| PF08021 | 117 | FAD_binding_9: Siderophore-interacting FAD-binding | 89.42 | |
| KOG4578 | 421 | consensus Uncharacterized conserved protein, conta | 88.23 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 85.13 | |
| PF09069 | 90 | EF-hand_3: EF-hand; InterPro: IPR015154 Like other | 83.97 | |
| KOG4065 | 144 | consensus Uncharacterized conserved protein [Funct | 82.44 | |
| KOG1707 | 625 | consensus Predicted Ras related/Rac-GTP binding pr | 80.65 |
| >KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=915.72 Aligned_cols=644 Identities=55% Similarity=0.974 Sum_probs=572.2
Q ss_pred CCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCC
Q 002711 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHN 273 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~ 273 (889)
+| |+++||. +.+.+.|++++.+|+|+|+ +||.++.+|+.++++.+...+.+..++++.+++.+.++++.|.++
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDH 74 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccc
Confidence 37 9999999 6788999999999999999 999999999999999877776688889999999999999999999
Q ss_pred CCcccHHHHHHHHHhCCCcccccccchhhhhhhhhhccCCCCCCCcccccccccccccccccceeehhHHHHHHHHHHHH
Q 002711 274 LGYIELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFT 353 (889)
Q Consensus 274 dG~Is~~EF~~~l~~~p~~~~~~~~~~~~l~~~~s~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~v~lf~ 353 (889)
.|++.++++..++.+.|.+.....+...+++.++.+.+.|.+ ..+..+++.....+++++|.++|.+++|+.+++++|.
T Consensus 75 ~~y~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lf~ 153 (646)
T KOG0039|consen 75 KGYITNEDLEILLLQIPTLLFAILLSFANLSLLLSQPLKPTR-RKPLLRNLVRMGAFLPNLWLRVWVLFLWLGLNVGLFT 153 (646)
T ss_pred cceeeecchhHHHHhchHHHHHHHHHHHHHHhhhcccccccc-ccccchheeeeeeeeccceEeeeeehHHHHHHHHHHH
Confidence 999999999999999997642211111145566777777655 4456677778888999999999999999999999999
Q ss_pred HHHHhccccchhhhcceeeeeecchhhhHHHHHHHHHHHhhhhhhhhccccccCCceecCCcchhHHHHHHHHHHHHhhh
Q 002711 354 WKFIQYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGL 433 (889)
Q Consensus 354 ~~~~~y~~~~~~~~~g~~~~~a~~~a~~l~~n~~lill~~~Rn~l~~Lr~~t~l~~~~~~d~~~~fHr~ig~~~~~~~~l 433 (889)
|++.+|....+++++|+++++++++|.++++||+++++++|||.++||+..+.+..++|+|+++.||+.+|..+...+.+
T Consensus 154 ~~~~~y~~~~~~~~~g~~~~~~~~~~~~l~~~~~~ill~~~R~~~~~L~~~~fl~~~~p~~~n~~fh~l~g~~~~~~~~~ 233 (646)
T KOG0039|consen 154 WRFLQYVYLGTRHILGLCLALARGSAETLNFNMALILLPVCRNRLTFLRCSTFLFSYLPFDRNLNFHKLVALTIAVFILL 233 (646)
T ss_pred HHHHHHHhhhhhhhhhheeeeeccccccchhhHHHHHHHHHHHHHHHHHHhhhhheEeeccccchHHHHHHHHHHHHHHH
Confidence 99999988778899999999999999999999999999999999999996588889999999999999999999999999
Q ss_pred hhhhhhhcccccccccCccccc-CccCccCCCCCCcccccccccchhHHHHHHHHHHHHHHhhhhhHhhccCCchhhhhc
Q 002711 434 HAGAHLTCDFPRLLHATDEEYE-PMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKK 512 (889)
Q Consensus 434 H~~~~l~~~f~~~~~~~~~~~~-~l~~~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i~~~~s~~~~Rr~~~~~~~~~~~ 512 (889)
|.++|.+|.|+.++|.....+. ....+++ ++.|++++.++.++||++++++|++|+++|+++|||+
T Consensus 234 H~w~~~~~~~~~~ih~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~tGv~~~i~~~im~v~s~~~fRR~---------- 300 (646)
T KOG0039|consen 234 HIWLHLVNFFPFLVHGLEYTISLASELFFL---PKTYKWLLLGVVGLTGVILLILMLIMFVLSLPFFRRR---------- 300 (646)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhccc---chhhhhhhcCCCcchhHHHHHHHHHHHHHhhHHHHHH----------
Confidence 9999999988888876543221 1222232 5578888999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhhhccccccceehhhhhhhhhhHhHHHHHHHHhhccccEEEEEEEEecCCEEE
Q 002711 513 LTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLA 592 (889)
Q Consensus 513 ~~~ye~F~~~H~l~~i~~vll~~H~~~~~l~~~w~~~~~w~y~~~~~~l~~~drl~R~~r~~~~~~~i~~v~~~~~~v~~ 592 (889)
.||+|||+|||++++|+++++||...++. .+|+|+++|+++|++||++|..|+ ..+++++++..+|+++++
T Consensus 301 --~~e~F~ytH~l~~v~~illi~hg~~~~~~------~~w~~~~~p~~ly~~dR~~r~~r~-~~~~~i~~~~llp~~vi~ 371 (646)
T KOG0039|consen 301 --FYEAFWYTHHLYIVFYILLIIHGGFRLLG------TTWMYIAVPVLLYILDRILRFLRS-QKNVKIAKVVLLPSDVLE 371 (646)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcccccc------cchhHHHHHHHHHHHHHHHHHHHH-hcCceEEEEEEcCCCeEE
Confidence 79999999999999999999999876542 689999999999999999999999 578999999999999999
Q ss_pred EEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhccCCCCCCCcccccccc
Q 002711 593 LQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADI 672 (889)
Q Consensus 593 l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~ 672 (889)
|++++|++|+|+||||+||+||++++||||||||+|+|+|+++++|||+.||||++|++.+++.|+++..+.+
T Consensus 372 L~~~Kp~~f~y~~Gqyifv~~p~ls~~qwHPFTItSsp~dd~lsvhIk~~g~wT~~L~~~~~~~~~~~~~~~~------- 444 (646)
T KOG0039|consen 372 LIMSKPPGFKYKPGQYIFVNCPSLSKLEWHPFTITSAPEDDFLSVHIKALGDWTEKLRNAFSEVSQPPESDKS------- 444 (646)
T ss_pred EEEeCCCCCCCCCCCEEEEECccccccccCCceeecCCCCCEEEEEEEecCcHHHHHHHHHhhhccccccccc-------
Confidence 9999999999999999999999999999999999999999999999999999999999999765544322111
Q ss_pred ccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCc
Q 002711 673 GQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFA 752 (889)
Q Consensus 673 ~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (889)
...+++.||||||++++++.+||+++|||||+|+||++|++++++++.+..+...+ .+.......
T Consensus 445 ------~~~~~i~IdGPYG~~s~d~~~~e~~vLV~~GiGvtPf~sil~~l~~~~~~~~~~~~---------~~~~~~~~~ 509 (646)
T KOG0039|consen 445 ------YPFPKILIDGPYGAPSQDVFKYEVLVLVGGGIGVTPFASILKDLLNKISLGRTKAP---------TSDYSDSLK 509 (646)
T ss_pred ------ccCceEEEECCCCCCchhhhhcceEEEEccCcccCccHHHHHHHHhhccCCCCcCc---------cccccccce
Confidence 23679999999999999999999999999999999999999999998665321000 112233456
Q ss_pred cceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCcccccc
Q 002711 753 TKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHF 832 (889)
Q Consensus 753 ~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~ 832 (889)
+++++|+|++|++.+++||.+++.++.+.+..+.+++|+|+|+.++++|++++++.|.|.+.|++++.|+++|++..+|+
T Consensus 510 ~~~~~F~Wv~~~~~sf~wf~~~l~~v~~~~~~~~~e~~~~~t~~~~~~d~~~~~~~~~~~~~~~~~~~di~~g~~~~~~~ 589 (646)
T KOG0039|consen 510 LKKVYFYWVTREQRSFEWFKGLLTEVEEYDSSGVIELHNYVTSSYEEGDARSALIQMVQKLLHAKNGVDIVTGLKVETHF 589 (646)
T ss_pred ecceeEEEEeccccchHHHHHHHHHHHHHHhcCCchhheehhHhHhhhhhhhHHHHHHHhhcccccCccccccceeeeeC
Confidence 88999999999999999999999999998887889999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 833 ARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 833 GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
|||||++++++++..|++.+++||+||||+|.+++|+.|.+.+.++.+.|+||+|+|
T Consensus 590 gRPn~~~~~~~~~~~~~~~~vgVf~CGp~~l~~~~~~~~~~~~~~~~~~~~f~~E~F 646 (646)
T KOG0039|consen 590 GRPNWKEVFKEIAKSHPNVRVGVFSCGPPGLVKELRKLCNDFSSSTATRFEFHKENF 646 (646)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEEEeCCHHHHHHHHHHHHhcccccCceeeeeeccC
Confidence 999999999999999988789999999999999999999999988889999999998
|
|
| >PLN02631 ferric-chelate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-59 Score=545.80 Aligned_cols=367 Identities=23% Similarity=0.409 Sum_probs=288.7
Q ss_pred hhHHHHHHHHHHHHHHHHhccccchhh-----------hcceeeeeecchhhhHHHHHHHHHHHhhhh-hhhhccccccC
Q 002711 340 VMLLWLSICAGLFTWKFIQYKHRAVFH-----------VMGYCVTTAKGAAETLKFNMALILLPVCRN-TITWLRSRTKL 407 (889)
Q Consensus 340 ~~~l~~~~~v~lf~~~~~~y~~~~~~~-----------~~g~~~~~a~~~a~~l~~n~~lill~~~Rn-~l~~Lr~~t~l 407 (889)
+-++++++.+++++|.+..|-.... . .......+|.++|.....|+++++||+.|| .++||+|
T Consensus 108 ~e~~~~~~f~~~~~w~~~~y~~~~~-~~~~~~~~~~~~~~~~l~~ig~RtGila~~~lpll~L~a~Rnn~L~~ltG---- 182 (699)
T PLN02631 108 TELTFSLLFVALLAWSLYNYLYLSY-HVHLHNDDNAKIWQAKFRAFGLRIGYVGHICWAFLFFPVTRASTILPLVG---- 182 (699)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-eeccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHC----
Confidence 4457778888888887776643221 1 012345678899999999999999999997 5899999
Q ss_pred CceecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCcccccCccCccCCCCCCcccccccccchhHHHHHHHH
Q 002711 408 GQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVL 487 (889)
Q Consensus 408 ~~~~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~~l~~~~~~~~~~~yw~~~~~~~g~tG~i~lv~ 487 (889)
|+|++++.||||+|+++++++++|+++++.. +.. .+.+. ..+. ....|| .+++|++++++
T Consensus 183 ---~s~e~~i~yHRWlGri~~~la~iH~i~y~i~-~~~-----~~~~~---~~~~--w~~~~~------~~~~GviA~v~ 242 (699)
T PLN02631 183 ---LTSESSIKYHIWLGHVSNFLFLVHTVVFLIY-WAM-----INKLM---ETFA--WNPTYV------PNLAGTIAMVI 242 (699)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-----hchhh---hhhh--cccccc------hHHHHHHHHHH
Confidence 9999999999999999999999999999865 211 11111 0010 001122 35789999999
Q ss_pred HHHHHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHHHHHhhhhhhccccccceehhh-hhhhhhhHhHHH
Q 002711 488 MAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMY-LAVPVLLYACER 566 (889)
Q Consensus 488 ~~i~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll~~H~~~~~l~~~w~~~~~w~y-~~~~~~l~~~dr 566 (889)
+++|+++|+++|||+ +||+|+++|++++++++++++|.. ..|.| +++++++|++||
T Consensus 243 ~~lm~~~Sl~~~RRr------------~YE~F~~~Hillaifiv~~~~H~g-----------~~w~~~~~~~ialw~~DR 299 (699)
T PLN02631 243 GIAMWVTSLPSFRRK------------KFELFFYTHHLYGLYIVFYVIHVG-----------DSWFCMILPNIFLFFIDR 299 (699)
T ss_pred HHHHHHhccHHHHhh------------hhhHHHHHHHHHHHHHHheEEecC-----------CchHHHHHHHHHHHHHHH
Confidence 999999999999998 799999999999987777788852 12433 456688999999
Q ss_pred HHHHHhhccccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCC--CCceEEEEEecCc
Q 002711 567 LIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGD 644 (889)
Q Consensus 567 l~R~~r~~~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~ 644 (889)
++|.+|+.. ..++++++.+|++++++++++|++++|+||||++|++|..+.+|||||||+|+|+ ++.++++||..|+
T Consensus 300 ~lR~~r~~~-~~~lv~~~~l~~d~l~l~~~~~~~~~~~PGQfvfL~~p~~s~~q~HPFSIaSsp~~~~~~L~~~IK~~Gg 378 (699)
T PLN02631 300 YLRFLQSTK-RSRLVSARILPSDNLELTFSKTPGLHYTPTSILFLHVPSISKLQWHPFTITSSSNLEKDTLSVVIRRQGS 378 (699)
T ss_pred HHHHHHHhc-eEEEEEEEEeCCCeEEEEEEcCCCCcCCCCceEEEEeccCCccceEEEEEeccCCCCCCEEEEEEEcCCh
Confidence 999999874 4788889999999999999998889999999999999999999999999999984 5789999999999
Q ss_pred chHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHH
Q 002711 645 WTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLN 724 (889)
Q Consensus 645 wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~ 724 (889)
||++|++.+.. .++ ..+|.||||||.+..+..+++.+|+||||+||||++|++++++.
T Consensus 379 ~T~~L~~~l~~------------------~g~----~i~V~VeGPYG~~~~~~~~~~~vVlIAGGsGITP~lSiL~~ll~ 436 (699)
T PLN02631 379 WTQKLYTHLSS------------------SID----SLEVSTEGPYGPNSFDVSRHNSLILVSGGSGITPFISVIRELIF 436 (699)
T ss_pred HHHHHHHhhhc------------------CCC----eeEEEEECCCCCCCCCcCCCCcEEEEEeCcChHhHHHHHHHHHh
Confidence 99999987631 111 24799999999876666788999999999999999999999986
Q ss_pred HHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhh---cCCCcEEEEEeeecccc
Q 002711 725 NIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEY---DQDGVIELHNYCTSVYE 798 (889)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~---~~~~~i~l~~y~T~~~~ 798 (889)
+..+. ..+.++++|+|++|+.+++. |.+++..++.. ..+.++++++|+|+..+
T Consensus 437 ~~~~~--------------------~~~~~~V~Li~~vR~~~dL~-f~deL~~l~~~~~~l~~~ni~i~iyVTR~~~ 492 (699)
T PLN02631 437 QSQNP--------------------STKLPDVLLVCSFKHYHDLA-FLDLIFPLDISVSDISRLNLRIEAYITREDK 492 (699)
T ss_pred ccccc--------------------ccCCCcEEEEEEECCHHHhh-hHHHHhhhccchhhhhcCceEEEEEEcCCCC
Confidence 53211 01245899999999999986 77777653211 11358999999998543
|
|
| >PLN02292 ferric-chelate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-58 Score=543.46 Aligned_cols=340 Identities=21% Similarity=0.394 Sum_probs=272.6
Q ss_pred eeeecchhhhHHHHHHHHHHHhhhh-hhhhccccccCCceecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccC
Q 002711 372 VTTAKGAAETLKFNMALILLPVCRN-TITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHAT 450 (889)
Q Consensus 372 ~~~a~~~a~~l~~n~~lill~~~Rn-~l~~Lr~~t~l~~~~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~ 450 (889)
..+|.++|....++|+++++|+.|| .+.||+| |||++++.||||+|+++++++++|+++|++. +. .
T Consensus 167 ~~vg~R~Gila~~~lpll~l~~~Rnn~L~~ltG-------~s~e~f~~yHRWlGrii~ll~~lH~i~y~i~-~~-----~ 233 (702)
T PLN02292 167 DSIAVRLGLVGNICLAFLFYPVARGSSLLAAVG-------LTSESSIKYHIWLGHLVMTLFTSHGLCYIIY-WI-----S 233 (702)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----h
Confidence 4578889999999999999999997 5899999 9999999999999999999999999999875 21 1
Q ss_pred cccccCccCccCCCCCCcccccccccchhHHHHHHHHHHHHHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHH
Q 002711 451 DEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVY 530 (889)
Q Consensus 451 ~~~~~~l~~~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~ 530 (889)
.+.+..+ ..|+ ..+..+++|+++++++.+|+++|+++|||+ +||+|+++|+++++++
T Consensus 234 ~~~~~~~----------~~w~-~~~~~~i~G~iAlv~~~il~v~Sl~~iRR~------------~YE~F~~~HiL~~v~~ 290 (702)
T PLN02292 234 MNQVSQM----------LEWD-RTGVSNLAGEIALVAGLVMWATTYPKIRRR------------FFEVFFYTHYLYIVFM 290 (702)
T ss_pred cCchhhh----------hhcc-ccchHHHHHHHHHHHHHHHHHHhhHHHHhc------------ccHhHHHHHHHHHHHH
Confidence 1111111 0121 123346789999999999999999999998 7999999999998887
Q ss_pred HHHHHHhhhhhhccccccceehhhhhhhhhhHhHHHHHHHHhhccccEEEEEEEEecCCEEEEEEecCCCCccCCccEEE
Q 002711 531 VLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIF 610 (889)
Q Consensus 531 vll~~H~~~~~l~~~w~~~~~w~y~~~~~~l~~~drl~R~~r~~~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~ 610 (889)
+++++|.... .+.++++++++|++||++|.+|++ .++++++++.++++++++++++|+.++|+||||+|
T Consensus 291 v~~~~H~~~~----------~~~~~~~~i~l~~~DR~lR~~r~~-~~~~Iv~~~~l~~dvv~L~~~~~~~~~~~PGQ~vf 359 (702)
T PLN02292 291 LFFVFHVGIS----------FALISFPGFYIFLVDRFLRFLQSR-NNVKLVSARVLPCDTVELNFSKNPMLMYSPTSIMF 359 (702)
T ss_pred eeeehhhhhH----------HHHHHHHHHHHHHHHHHHHHHHhh-cceEEEEEEEcCCCEEEEEEEcCCCCCcCCCCeEE
Confidence 7788996421 112345567899999999999875 78899999999999999999999889999999999
Q ss_pred EEEcCCCCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeC
Q 002711 611 VNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDG 688 (889)
Q Consensus 611 l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdG 688 (889)
|++|..+.+|+|||||+|+|. ++.++++||..|+||++|.+.++ +|+. ...++|.|+|
T Consensus 360 L~~P~~s~~q~HPFTIaSsp~~~~~~l~l~IK~~G~~T~~L~~~l~-------------------~gd~-i~~~~V~VeG 419 (702)
T PLN02292 360 VNIPSISKLQWHPFTITSSSKLEPEKLSVMIKSQGKWSTKLYHMLS-------------------SSDQ-IDRLAVSVEG 419 (702)
T ss_pred EEEccCCccceeeeEeeccCCCCCCEEEEEEEcCCchhHHHHHhCC-------------------CCCc-cccceEEEEC
Confidence 999999999999999999974 57899999999999999998762 2221 1134799999
Q ss_pred CCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCch
Q 002711 689 PYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSF 768 (889)
Q Consensus 689 PYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~ 768 (889)
|||.+..+...++++++||||+||||++|++++++++.... ..+.++++|+|++|+.+++
T Consensus 420 PYG~~~~~~~~~~~vvlIAGGiGITP~lsil~~L~~~~~~~--------------------~~~~~~V~LIw~vR~~~Dl 479 (702)
T PLN02292 420 PYGPASTDFLRHESLVMVSGGSGITPFISIIRDLIYTSSTE--------------------TCKIPKITLICAFKNSSDL 479 (702)
T ss_pred CccCCccccccCCcEEEEEeccCHHHHHHHHHHHHhccccc--------------------cCCCCcEEEEEEECCHHHh
Confidence 99998766667899999999999999999999997652110 0124789999999999987
Q ss_pred hHHHHHHHHH---HhhcCCCcEEEEEeeecccc
Q 002711 769 EWFRGVMNEV---AEYDQDGVIELHNYCTSVYE 798 (889)
Q Consensus 769 ~wf~~~l~el---~~~~~~~~i~l~~y~T~~~~ 798 (889)
.|..+...|+ .+...+..+++++|+|+..+
T Consensus 480 ~~ld~l~~e~~~~~~l~~~~~~~i~iyvTr~~~ 512 (702)
T PLN02292 480 SMLDLILPTSGLETELSSFIDIQIKAFVTREKE 512 (702)
T ss_pred hHHHHHHHhhhhHHHHhhcCCceEEEEEeCCCC
Confidence 6544444433 23323468999999998543
|
|
| >PLN02844 oxidoreductase/ferric-chelate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-58 Score=540.01 Aligned_cols=468 Identities=24% Similarity=0.457 Sum_probs=345.6
Q ss_pred hhHHHHHHHHHHHHHHHHhccccchh-----hhcc------eeeeeecchhhhHHHHHHHHHHHhhhh-hhhhccccccC
Q 002711 340 VMLLWLSICAGLFTWKFIQYKHRAVF-----HVMG------YCVTTAKGAAETLKFNMALILLPVCRN-TITWLRSRTKL 407 (889)
Q Consensus 340 ~~~l~~~~~v~lf~~~~~~y~~~~~~-----~~~g------~~~~~a~~~a~~l~~n~~lill~~~Rn-~l~~Lr~~t~l 407 (889)
+-++++++.+++.+|.+..|-.+..- ...+ ....+|++.|.....|++++++|++|| .+.|++|
T Consensus 110 ~e~~~~~~f~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~R~G~la~~~Lpll~llv~Rnn~l~~ltG---- 185 (722)
T PLN02844 110 LEILAVLLFFLFLAWTFYARISNDFKKLMPVKSLNLNLWQLKYLRVATRFGLLAEACLALLLLPVLRGLALFRLLG---- 185 (722)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHhhC----
Confidence 34566777777777777666432211 1111 234578888998899999999999997 4788888
Q ss_pred CceecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCcccccCccCccCCCCCCccccc-ccccchhHHHHHHH
Q 002711 408 GQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWF-VKGTEGWTGVVMVV 486 (889)
Q Consensus 408 ~~~~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~~l~~~~~~~~~~~yw~~-~~~~~g~tG~i~lv 486 (889)
+|||+++.||||+|+++++++++|+++|+.. +. .... . ...+|.| ..+...++|+++++
T Consensus 186 ---is~e~~i~fHrWlGr~~~llallH~i~~~i~-w~----~~~~-~-----------~~~~~~w~~~~~~~~~G~IAlv 245 (722)
T PLN02844 186 ---IQFEASVRYHVWLGTSMIFFATVHGASTLFI-WG----ISHH-I-----------QDEIWKWQKTGRIYLAGEIALV 245 (722)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hhcc-h-----------hhhhhhhccCcchhhhHHHHHH
Confidence 9999999999999999999999999998753 11 0100 0 0011111 12223468999999
Q ss_pred HHHHHHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHHHHHhhhhhhccccccceehhhhhhhhhhHhHHH
Q 002711 487 LMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACER 566 (889)
Q Consensus 487 ~~~i~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll~~H~~~~~l~~~w~~~~~w~y~~~~~~l~~~dr 566 (889)
++++|+++|++++||+ +||+||++|++++++++++++|... ..|.|+++++++|++||
T Consensus 246 ~l~iL~itSl~~iRR~------------~YElF~~~H~L~ivflv~~~~H~~~----------~~~~~v~~~i~L~~~DR 303 (722)
T PLN02844 246 TGLVIWITSLPQIRRK------------RFEIFYYTHHLYIVFLIFFLFHAGD----------RHFYMVFPGIFLFGLDK 303 (722)
T ss_pred HHHHHHHHhhHHHHhh------------hhHHHHHHHHHHHHHHHhhhHhhcC----------cchhhhHHHHHHHHHHH
Confidence 9999999999999998 7999999999998888888999742 12235667889999999
Q ss_pred HHHHHhhccccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecC--CCCceEEEEEecCc
Q 002711 567 LIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAP--GDDYLSIHIRTLGD 644 (889)
Q Consensus 567 l~R~~r~~~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP--~~~~l~l~Ir~~G~ 644 (889)
++|.++++ ....++++..+|++++++++++|..++|+||||++|++|..+++|||||||+|+| +++.++++||..|+
T Consensus 304 llR~~~s~-~~~~vvs~~~~~~~~v~l~i~r~~~~~f~PGQfV~L~vp~~s~~q~HPFSIaS~p~~~~~~l~~~IK~~gG 382 (722)
T PLN02844 304 LLRIVQSR-PETCILSARLFPCKAIELVLPKDPGLKYAPTSVIFMKIPSISRFQWHPFSITSSSNIDDHTMSVIIKCEGG 382 (722)
T ss_pred HhheEEEe-eeEEEEEEEEecCCEEEEEEECCCCCCcCCCeeEEEEECCCCceeEEEEEeecCCCCCCCeEEEEEEeCCC
Confidence 99988765 3445667788899999999999989999999999999999999999999999987 46789999999999
Q ss_pred chHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHH
Q 002711 645 WTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLN 724 (889)
Q Consensus 645 wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~ 724 (889)
||++|++...... .+|.......++.|+||||.+..+...++++++||||+||||++|+++++.+
T Consensus 383 ~T~~L~~~i~~~l---------------~~g~~~~~~~~v~VeGPYG~~s~~~~~~~~lVLIAGGiGITPfLSiLrdl~~ 447 (722)
T PLN02844 383 WTNSLYNKIQAEL---------------DSETNQMNCIPVAIEGPYGPASVDFLRYDSLLLVAGGIGITPFLSILKEIAS 447 (722)
T ss_pred chHHHHHHHHhhc---------------cCCCCcccceEEEEECCccCCCCCccCCCeEEEEEcCcCHHHHHHHHHHHHh
Confidence 9999998764210 0111111224799999999987677778999999999999999999999976
Q ss_pred HHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhh-cCCCcEEEEEeeeccccCCC--
Q 002711 725 NIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEY-DQDGVIELHNYCTSVYEEGD-- 801 (889)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~-~~~~~i~l~~y~T~~~~~~d-- 801 (889)
+.... ....++|+|+|++|+.+++.|+.++..++.+. .....+++++|+|+...+..
T Consensus 448 ~~~~~--------------------~~~~~~V~LIw~vR~~~dL~~~del~~~l~~~~~~~~~lkl~iyVTRE~~~~~rl 507 (722)
T PLN02844 448 QSSSR--------------------YRFPKRVQLIYVVKKSQDICLLNPISSLLLNQSSNQLNLKLKVFVTQEEKPNATL 507 (722)
T ss_pred ccccc--------------------cCCCCcEEEEEEECCHHHhhhHHHHHHHhHHhHHHhcCceEEEEECCCCCCCCch
Confidence 42110 01246899999999999998888776555431 11247899999998644311
Q ss_pred -------------------hhh------------HH-----------HHHHH------hhhc--------------ccCC
Q 002711 802 -------------------ARS------------AL-----------ITMLQ------SIHH--------------AKNG 819 (889)
Q Consensus 802 -------------------~~s------------~~-----------~~~~~------~l~~--------------~~~~ 819 (889)
.++ +. +...+ +-++ +++.
T Consensus 508 ~~~i~~~~~~~~~~~~~~~~~~~i~G~~~~lw~~~~~~~s~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 587 (722)
T PLN02844 508 RELLNQFSQVQTVNFSTKCSRYAIHGLESFLWMAAMVALTSITFLVFLIGLNHIFIPSEHKSHSGVKMAASGEMKTAKEK 587 (722)
T ss_pred hhHhhccchhhhcCCCCCCCceEEeCCCchHHHHHHHHHHHHHHHHHHHHHheEEeccccccccchhcccccccccccCC
Confidence 000 00 00000 0000 0000
Q ss_pred ------------------------------------Ccccc--------------C----CccccccC-CCCHHHHHHHH
Q 002711 820 ------------------------------------LDIVS--------------G----TRVKTHFA-RPNWRTVFKHV 844 (889)
Q Consensus 820 ------------------------------------~d~~s--------------g----~~~~~~~G-RPd~~~v~~~~ 844 (889)
.+..+ + ..-.+|+| |||++++++.+
T Consensus 588 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rp~~~~i~~~~ 667 (722)
T PLN02844 588 TPSWVVDLLLIVSFIIAITCSTFVAIILRWRRLKKEIPRVSQKQGIKPEEGSMEKRGPVLEEHEIHFGGRPNFQDIFSKF 667 (722)
T ss_pred CchHHHHHHHHHHHHHHheecceEeEeeeccccccCCccccccccCCCCCccccccccccccceeecCCCCCHHHHHHHh
Confidence 00000 0 12247888 99999999999
Q ss_pred HhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc-----C---CCCcEEEEeeCC
Q 002711 845 AVKHTDERVGVFYCGAPGLTGELRRLSQDFSR-----K---TTTKFDFHKENF 889 (889)
Q Consensus 845 ~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~-----~---~~~~f~fh~E~F 889 (889)
.++..+.+|||.+|||++|.++|.+.|+..+. . ..+.|+||.=+|
T Consensus 668 ~~~~~~~~vgvlv~gp~~~~~~va~~~~~~~~~~~~~~~~~~~~~~~~hs~~f 720 (722)
T PLN02844 668 PKETRGSDIGVLVCGPETMKESVASMCRLKSQCFNVGDDGKRKMYFSFHSLNF 720 (722)
T ss_pred hhhccCCceeEEEeCchHHHHHHHHHHHhcccccccccccccCCceeeeeccc
Confidence 99998899999999999999999999999876 2 246799999887
|
|
| >COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=337.36 Aligned_cols=380 Identities=21% Similarity=0.303 Sum_probs=251.6
Q ss_pred HHHHHHHHHHHhhhhhhhhccccccCCceecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCccccc--CccC
Q 002711 382 LKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYE--PMKP 459 (889)
Q Consensus 382 l~~n~~lill~~~Rn~l~~Lr~~t~l~~~~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~--~l~~ 459 (889)
....|+++++.+.|- .|+.. ++ -+.|..+.||||.|+.++++.+.|-+......+-.. ..-.+. ++++
T Consensus 48 aL~~msl~~~LA~R~--~~iE~--~~---~GlD~~Y~~HK~~sIlailL~l~H~~~~~~g~w~~~---~~l~~k~a~v~~ 117 (438)
T COG4097 48 ALALMSLIFLLATRL--PLIEA--WF---NGLDKIYRFHKYTSILAILLLLAHNFILFIGNWLTL---QLLNFKPAPVKP 117 (438)
T ss_pred HHHHHHHHHHHHhch--HHHhh--hh---hhhhHHhHHHHHHHHHHHHHHHHHHHHHHcCcchhc---ccccccccccch
Confidence 346788899999993 23332 21 258999999999999999999999887544422110 000000 1111
Q ss_pred ccCCCCCCcccccccccchhHHHHHHHHHHHHHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHHHHHhhh
Q 002711 460 FFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYF 539 (889)
Q Consensus 460 ~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll~~H~~~ 539 (889)
+.. ..|...+. .|-++.-+++.|.+ .+.-|-+ ..||.|.+.|.+++++|++..+|...
T Consensus 118 ~l~-----~~~~s~~e-lG~~~~yi~~~lll---V~~l~~~-------------i~Ye~WR~~H~lm~vvYilg~~H~~~ 175 (438)
T COG4097 118 SLA-----GMWRSAKE-LGEWSAYIFIGLLL---VWRLWLN-------------IGYENWRIAHRLMAVVYILGLLHSYG 175 (438)
T ss_pred hhh-----hhhHHHHH-HHHHHHHHHHHHHH---HHHHHHh-------------cCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 111 12222111 12222222222222 2222222 37999999999999999999999765
Q ss_pred hhhcccccccee-hh---hhhhhhhhHhHHHHHHHHhhccccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcC
Q 002711 540 LYLSKKWYKRTT-WM---YLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAA 615 (889)
Q Consensus 540 ~~l~~~w~~~~~-w~---y~~~~~~l~~~drl~R~~r~~~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~ 615 (889)
..-...|..+.. |. |.+++...++.--..+..|++.+.++|+.++..+.++++++.....++.|+|||+.||.|+.
T Consensus 176 l~~~~~~s~~a~swl~~~~allG~l~~iysi~~y~~~s~~y~~~vt~~~r~~~~t~eit~~l~~~~~~qaGQFAfLk~~~ 255 (438)
T COG4097 176 LLNYLYLSWPAVSWLVIAFALLGLLAAIYSIFGYFGRSFPYLGKVTAPQRGNVDTLEITIGLQGPWLYQAGQFAFLKIEI 255 (438)
T ss_pred hcchhHhhccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccceEEechhhcCcchheeecccCCcccccCCceEEEEecc
Confidence 322222322222 42 11222222222233355677777888888888888888888877667889999999999987
Q ss_pred CC-CCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC
Q 002711 616 VS-QFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 616 is-~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~ 694 (889)
.. .+..|||||+++.+...+.|.||+.||+|+.|++.+ ++|+ ++.||||||.+.
T Consensus 256 ~~~~~~~HPFTIa~s~~~sel~FsIK~LGD~Tk~l~dnL-------------------k~G~------k~~vdGPYG~F~ 310 (438)
T COG4097 256 EEFRMRPHPFTIACSHEGSELRFSIKALGDFTKTLKDNL-------------------KVGT------KLEVDGPYGKFD 310 (438)
T ss_pred ccccCCCCCeeeeeCCCCceEEEEehhhhhhhHHHHHhc-------------------cCCc------eEEEecCcceee
Confidence 53 467999999999888899999999999999999866 2576 899999999984
Q ss_pred CCCCCCC-EEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHH
Q 002711 695 QDYKDYD-VLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRG 773 (889)
Q Consensus 695 ~~~~~~~-~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~ 773 (889)
+.++. +-|+||||||||||+|+++.+..+. ..+.|+|++++|+.++. -+.+
T Consensus 311 --~~~g~~~QVWIAGGIGITPFis~l~~l~~~~-------------------------s~~~V~L~Y~~~n~e~~-~y~~ 362 (438)
T COG4097 311 --FERGLNTQVWIAGGIGITPFISMLFTLAERK-------------------------SDPPVHLFYCSRNWEEA-LYAE 362 (438)
T ss_pred --cccCCcccEEEecCcCcchHHHHHHhhcccc-------------------------cCCceEEEEEecCCchh-HHHH
Confidence 44444 3899999999999999999986521 24779999999999985 5788
Q ss_pred HHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeE
Q 002711 774 VMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERV 853 (889)
Q Consensus 774 ~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v 853 (889)
+|+++++.. +++++|+.-++.. |--|.+++-+. .+++ ..-
T Consensus 363 eLr~~~qkl--~~~~lHiiDSs~~-----------------------------------g~l~~e~ler~--~~~~-~~~ 402 (438)
T COG4097 363 ELRALAQKL--PNVVLHIIDSSKD-----------------------------------GYLDQEDLERY--PDRP-RTR 402 (438)
T ss_pred HHHHHHhcC--CCeEEEEecCCCC-----------------------------------CccCHHHhhcc--cccc-Ccc
Confidence 888887643 5678887322211 01111111111 0111 123
Q ss_pred EEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 854 GVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 854 ~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.||+|||++|++.+|+..+..+.+. + +||.|.|
T Consensus 403 sv~fCGP~~m~dsL~r~l~~~~~~i--~-~~h~E~F 435 (438)
T COG4097 403 SVFFCGPIKMMDSLRRDLKKQNVPI--T-NFHYEHF 435 (438)
T ss_pred eEEEEcCHHHHHHHHHHHHHcCCCH--H-HHHHHhc
Confidence 7999999999999999888765431 1 8999987
|
|
| >cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=285.74 Aligned_cols=205 Identities=36% Similarity=0.658 Sum_probs=165.0
Q ss_pred EEEEEec-CCEEEEEEecCCCCccCCccEEEEEEcCC-CCCcccceeeeecCCC--CceEEEEEecCcchHHHHHHHhhc
Q 002711 581 LKVAVYP-GNVLALQMSKPQGFKYTSGQYIFVNCAAV-SQFQWHPFSITSAPGD--DYLSIHIRTLGDWTSQLKSIFAKV 656 (889)
Q Consensus 581 ~~v~~~~-~~v~~l~~~~p~~~~~~pGQyv~l~~p~i-s~~e~HPFTIaSaP~~--~~l~l~Ir~~G~wT~~L~~~~~~~ 656 (889)
++++.++ +++++|+++.|..+.|+||||++|++|.. +++++|||||+|+|.+ +.++|+||..+|+|+++.+.+.+.
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~~~~~pGq~v~l~~~~~~~~~~~hpfsias~~~~~~~~i~~~vk~~~G~~t~~~~~~~~~ 81 (210)
T cd06186 2 ATVELLPDSDVIRLTIPKPKPFKWKPGQHVYLNFPSLLSFWQSHPFTIASSPEDEQDTLSLIIRAKKGFTTRLLRKALKS 81 (210)
T ss_pred eEEEEecCCCEEEEEEecCCCCccCCCCEEEEEeCCCCCCcccCCcEeeeCCCCCCCEEEEEEEecCChHHHHHHHHHhC
Confidence 4678888 99999999998889999999999999998 7899999999999976 899999999955666666554210
Q ss_pred cCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccccc
Q 002711 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGI 736 (889)
Q Consensus 657 ~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~ 736 (889)
.+.....++.|+||||.+..+...++++||||||+||||++|++++++.+..+
T Consensus 82 -------------------~~~~~~~~v~v~GP~G~~~~~~~~~~~~vliagG~GItp~~s~l~~l~~~~~~-------- 134 (210)
T cd06186 82 -------------------PGGGVSLKVLVEGPYGSSSEDLLSYDNVLLVAGGSGITFVLPILRDLLRRSSK-------- 134 (210)
T ss_pred -------------------cCCCceeEEEEECCCCCCccChhhCCeEEEEeccccHhhhHHHHHHHHhhhhc--------
Confidence 00111238999999999875566789999999999999999999999865321
Q ss_pred ccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcc
Q 002711 737 TEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHA 816 (889)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~ 816 (889)
....++++|+|++|+.+++.||.++|.+..+..... .+++|+|+
T Consensus 135 -------------~~~~~~v~l~w~~r~~~~~~~~~~~l~~~~~~~~~~--~~~i~~T~--------------------- 178 (210)
T cd06186 135 -------------TSRTRRVKLVWVVRDREDLEWFLDELRAAQELEVDG--EIEIYVTR--------------------- 178 (210)
T ss_pred -------------cCCccEEEEEEEECCHHHhHHHHHHHHhhhhccCCc--eEEEEEee---------------------
Confidence 012578999999999999999999987522222111 67778761
Q ss_pred cCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 817 KNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 817 ~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
|++|||++|++++++.+.. +....+.||+|+|
T Consensus 179 --------------------------------------v~~CGp~~~~~~~~~~~~~---~~~~~~~~~~e~f 210 (210)
T cd06186 179 --------------------------------------VVVCGPPGLVDDVRNAVAK---KGGTGVEFHEESF 210 (210)
T ss_pred --------------------------------------EEEECchhhccHHHHHHhh---cCCCceEEEeecC
Confidence 9999999999999999987 4467899999998
|
ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation. |
| >cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=244.00 Aligned_cols=228 Identities=18% Similarity=0.264 Sum_probs=169.4
Q ss_pred EEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCC-CCCcccceeeeecCCCCceEEEEEec--CcchHHHHHHHhhc
Q 002711 580 ILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAV-SQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSIFAKV 656 (889)
Q Consensus 580 i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~i-s~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~~L~~~~~~~ 656 (889)
|++++.+++++++|+++.|..+.|+||||+.|++|.. +...+|||||+|+|.++.++|+||.. |..|+.|.+ +
T Consensus 2 v~~~~~~t~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~ySi~s~~~~~~i~~~i~~~~~G~~s~~l~~-l--- 77 (241)
T cd06195 2 VLKRRDWTDDLFSFRVTRDIPFRFQAGQFTKLGLPNDDGKLVRRAYSIASAPYEENLEFYIILVPDGPLTPRLFK-L--- 77 (241)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCccCCCCeEEEeccCCCCCeeeecccccCCCCCCeEEEEEEEecCCCCchHHhc-C---
Confidence 5678888999999999988778899999999999876 56789999999999888999999976 888887753 2
Q ss_pred cCCCCCCCccccccccccCCCCCCccEEEEe-CCCCCCCCCCC-CCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLID-GPYGAPAQDYK-DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 657 ~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vd-GPYG~~~~~~~-~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
.+|+ .+.+. ||||.+..+.. ..+.++|||||+||||++++++++....
T Consensus 78 ----------------~~Gd------~v~v~~gP~G~f~~~~~~~~~~~vlIagGtGiaP~~~~l~~~~~~~-------- 127 (241)
T cd06195 78 ----------------KPGD------TIYVGKKPTGFLTLDEVPPGKRLWLLATGTGIAPFLSMLRDLEIWE-------- 127 (241)
T ss_pred ----------------CCCC------EEEECcCCCCceeecCCCCCceEEEEeeccchhhHHHHHHHHHhhC--------
Confidence 2577 89999 99999764333 4679999999999999999999986431
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..++++|+|++|+.+++ +|.++|+++++.. ...++++.++|+..+..
T Consensus 128 -----------------~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~-~~~~~~~~~~s~~~~~~-------------- 174 (241)
T cd06195 128 -----------------RFDKIVLVHGVRYAEEL-AYQDEIEALAKQY-NGKFRYVPIVSREKENG-------------- 174 (241)
T ss_pred -----------------CCCcEEEEEccCCHHHh-hhHHHHHHHHhhc-CCCEEEEEEECcCCccC--------------
Confidence 24689999999999997 6889898887641 24688877776432110
Q ss_pred cccCCCccccCCccccccCCCCHH---HHHHHHHhhC-CCCeEEEEEeCChhHHHHHHHHHHhhhcCC---CCcEEEEee
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWR---TVFKHVAVKH-TDERVGVFYCGAPGLTGELRRLSQDFSRKT---TTKFDFHKE 887 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~---~v~~~~~~~~-~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~---~~~f~fh~E 887 (889)
+ ..||.+-. +.+.+..... ..+...||+|||++|++.+++.+.+..... ...-.+|.|
T Consensus 175 ----------~-----~~g~v~~~l~~~~l~~~~~~~~~~~~~~vyiCGp~~m~~~~~~~l~~~G~~~~~~~~~~~~~~E 239 (241)
T cd06195 175 ----------A-----LTGRIPDLIESGELEEHAGLPLDPETSHVMLCGNPQMIDDTQELLKEKGFSKNHRRKPGNITVE 239 (241)
T ss_pred ----------C-----CceEhHHhhhhchhhHhhCCCCCcccCEEEEeCCHHHHHHHHHHHHHcCCCccccCCCceEEEe
Confidence 0 01232210 1111111111 123457999999999999999998875431 122789999
Q ss_pred CC
Q 002711 888 NF 889 (889)
Q Consensus 888 ~F 889 (889)
.|
T Consensus 240 ~~ 241 (241)
T cd06195 240 KY 241 (241)
T ss_pred cC
Confidence 88
|
Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. |
| >cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=240.18 Aligned_cols=191 Identities=20% Similarity=0.312 Sum_probs=146.1
Q ss_pred EEEecCCEEEEEEecCCC---CccCCccEEEEEEcCCC----------------CCcccceeeeecCCC----CceEEEE
Q 002711 583 VAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVS----------------QFQWHPFSITSAPGD----DYLSIHI 639 (889)
Q Consensus 583 v~~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is----------------~~e~HPFTIaSaP~~----~~l~l~I 639 (889)
.+.++++|.++++..|.+ +.|+|||||.|++|... ...++||||+|+|++ +.+.|+|
T Consensus 3 ~~~~s~~v~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~~~~~~p~~~~~~~~R~ySias~p~~~~~~~~l~l~v 82 (220)
T cd06197 3 SEVITPTLTRFTFELSPPDVVGKWTPGQYITLDFSSELDSGYSHMADDDPQSLNDDFVRTFTVSSAPPHDPATDEFEITV 82 (220)
T ss_pred ceecccceeEEEEEecCCccccccCCCceEEEEccccccccccccccCCcchhcCCceeeEEeecCCccCCCCCEEEEEE
Confidence 466789999999998877 89999999999998531 134688999999964 6899999
Q ss_pred EecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCC---CCCCEEEEEEcCcchhhHH
Q 002711 640 RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY---KDYDVLLLVGLGIGATPLI 716 (889)
Q Consensus 640 r~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~---~~~~~vllVagGiGITP~l 716 (889)
|..|+||+.|.+..... ...|+ .+.|+||||.+..+. ..++.++||||||||||++
T Consensus 83 k~~G~~T~~L~~~~~~~---------------~~~G~------~v~v~gP~G~f~~~~~~~~~~~~illIagG~GItP~~ 141 (220)
T cd06197 83 RKKGPVTGFLFQVARRL---------------REQGL------EVPVLGVGGEFTLSLPGEGAERKMVWIAGGVGITPFL 141 (220)
T ss_pred EeCCCCCHHHHHhhhcc---------------cCCCc------eEEEEecCCcccCCcccccCCceEEEEecccchhhHH
Confidence 99999999999876310 00144 799999999976432 3467899999999999999
Q ss_pred HHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeecc
Q 002711 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSV 796 (889)
Q Consensus 717 sil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~ 796 (889)
|++++++.... ..++++|+|++|+.+++ +|.++|.++.+. .++++.+.|
T Consensus 142 sil~~l~~~~~------------------------~~~~v~l~~~~r~~~~~-~~~~el~~~~~~----~~~~~~~~~-- 190 (220)
T cd06197 142 AMLRAILSSRN------------------------TTWDITLLWSLREDDLP-LVMDTLVRFPGL----PVSTTLFIT-- 190 (220)
T ss_pred HHHHHHHhccc------------------------CCCcEEEEEEecchhhH-HHHHHHHhccCC----ceEEEEEEe--
Confidence 99999875311 14689999999999975 677766543321 122222111
Q ss_pred ccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 797 YEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 797 ~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
+ .||+|||++|++.+++.+++.
T Consensus 191 ------------------------------------~--------------------~v~~CGP~~m~~~~~~~~~~~-- 212 (220)
T cd06197 191 ------------------------------------S--------------------EVYLCGPPALEKAVLEWLEGK-- 212 (220)
T ss_pred ------------------------------------c--------------------cEEEECcHHHHHHHHHHhhhc--
Confidence 0 599999999999999988763
Q ss_pred CCCCcEEEEeeCC
Q 002711 877 KTTTKFDFHKENF 889 (889)
Q Consensus 877 ~~~~~f~fh~E~F 889 (889)
.+|.|.|
T Consensus 213 ------~~~~e~f 219 (220)
T cd06197 213 ------KVHRESF 219 (220)
T ss_pred ------eeEeccc
Confidence 7899988
|
Ferredoxin reductase (FNR) was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and have a variety of physiological functions in a variety of organisms including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which varies in orientation with respect to the NAD(P) binding domain. The N-terminal moeity |
| >cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=241.37 Aligned_cols=233 Identities=18% Similarity=0.280 Sum_probs=176.9
Q ss_pred HHHHHHHHhh----ccccEEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCC--CCceE
Q 002711 564 CERLIRAFRS----GYKSVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLS 636 (889)
Q Consensus 564 ~drl~R~~r~----~~~~~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~ 636 (889)
+||.+|.++. ....++|++++.+++++.++++..|.. ..|+||||++|.+|..+...+|||||+|.|. ++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~i~l~~~~~~~~~~pGQ~i~l~~~~~~~~~~r~ysi~s~~~~~~~~l~ 81 (243)
T cd06216 2 VDFYLELINPLWSARELRARVVAVRPETADMVTLTLRPNRGWPGHRAGQHVRLGVEIDGVRHWRSYSLSSSPTQEDGTIT 81 (243)
T ss_pred chhhhhhcCCCcccceeEEEEEEEEEcCCCcEEEEEecCCCCCCcCCCceEEEEEEECCeEEEEEEeccCCCcCCCCeEE
Confidence 4677777554 334678889999999999999998765 4799999999999866666789999999986 78899
Q ss_pred EEEEec--CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhh
Q 002711 637 IHIRTL--GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATP 714 (889)
Q Consensus 637 l~Ir~~--G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP 714 (889)
|+||.. |.+|..|.+.+ ++|+ +|.|.||||.+..+-..++.+++||||+||||
T Consensus 82 ~~ik~~~~G~~s~~l~~~~-------------------~~Gd------~v~i~gP~G~f~l~~~~~~~~v~iagG~Giap 136 (243)
T cd06216 82 LTVKAQPDGLVSNWLVNHL-------------------APGD------VVELSQPQGDFVLPDPLPPRLLLIAAGSGITP 136 (243)
T ss_pred EEEEEcCCCcchhHHHhcC-------------------CCCC------EEEEECCceeeecCCCCCCCEEEEecCccHhH
Confidence 999998 88898886533 2576 89999999997544334678999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeee
Q 002711 715 LISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCT 794 (889)
Q Consensus 715 ~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T 794 (889)
++|+++++.... ..++++++|++|+.+++ ++.++|.++++.. ..++++.++|
T Consensus 137 ~~s~l~~~~~~~-------------------------~~~~i~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s 188 (243)
T cd06216 137 VMSMLRTLLARG-------------------------PTADVVLLYYARTREDV-IFADELRALAAQH--PNLRLHLLYT 188 (243)
T ss_pred HHHHHHHHHhcC-------------------------CCCCEEEEEEcCChhhh-HHHHHHHHHHHhC--CCeEEEEEEc
Confidence 999999986541 14679999999999875 7888888876543 4577777766
Q ss_pred ccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhh
Q 002711 795 SVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDF 874 (889)
Q Consensus 795 ~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~ 874 (889)
+. + ..||.+.. .+++..... ....||+|||++|++++++.+.+.
T Consensus 189 ~~---~------------------------------~~g~~~~~-~l~~~~~~~--~~~~vyvcGp~~m~~~~~~~l~~~ 232 (243)
T cd06216 189 RE---E------------------------------LDGRLSAA-HLDAVVPDL--ADRQVYACGPPGFLDAAEELLEAA 232 (243)
T ss_pred CC---c------------------------------cCCCCCHH-HHHHhccCc--ccCeEEEECCHHHHHHHHHHHHHC
Confidence 32 0 11344422 233322211 235899999999999999998875
Q ss_pred hcCCCCcEEEEeeCC
Q 002711 875 SRKTTTKFDFHKENF 889 (889)
Q Consensus 875 ~~~~~~~f~fh~E~F 889 (889)
+ -. -..|.|.|
T Consensus 233 G---v~-~~i~~e~F 243 (243)
T cd06216 233 G---LA-DRLHTERF 243 (243)
T ss_pred C---Cc-cceeeccC
Confidence 3 33 45888887
|
Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to for |
| >cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=239.45 Aligned_cols=220 Identities=20% Similarity=0.347 Sum_probs=165.5
Q ss_pred EEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEec--CcchHHHHHHHhh
Q 002711 579 RILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDWTSQLKSIFAK 655 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~--G~wT~~L~~~~~~ 655 (889)
+|++++.+++++.+|++..|..++|+||||+.|.+|.. ++|||||+|.|. ++.++++||.. |.+|+.|.+.+
T Consensus 2 ~v~~~~~~t~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~---~~r~ySi~s~~~~~~~l~~~vk~~~~G~~s~~l~~~l-- 76 (224)
T cd06189 2 KVESIEPLNDDVYRVRLKPPAPLDFLAGQYLDLLLDDG---DKRPFSIASAPHEDGEIELHIRAVPGGSFSDYVFEEL-- 76 (224)
T ss_pred EEEEEEeCCCceEEEEEecCCCcccCCCCEEEEEcCCC---CceeeecccCCCCCCeEEEEEEecCCCccHHHHHHhc--
Confidence 57788889999999999988788999999999999864 589999999997 68899999998 77999887644
Q ss_pred ccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccc
Q 002711 656 VCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEG 735 (889)
Q Consensus 656 ~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~ 735 (889)
++|+ +|.|.||||.+......++.++|||||+||||++|++++++...
T Consensus 77 -----------------~~G~------~v~i~gP~G~~~~~~~~~~~ivliagG~GiaP~~~~l~~l~~~~--------- 124 (224)
T cd06189 77 -----------------KENG------LVRIEGPLGDFFLREDSDRPLILIAGGTGFAPIKSILEHLLAQG--------- 124 (224)
T ss_pred -----------------cCCC------EEEEecCCccEEeccCCCCCEEEEecCcCHHHHHHHHHHHHhcC---------
Confidence 2566 79999999998654345778999999999999999999987541
Q ss_pred cccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhc
Q 002711 736 ITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHH 815 (889)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~ 815 (889)
..++++|+|++|+.+++ ++.++++++++.. .++.++.++++..+..
T Consensus 125 ----------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~~~--------------- 170 (224)
T cd06189 125 ----------------SKRPIHLYWGARTEEDL-YLDELLEAWAEAH--PNFTYVPVLSEPEEGW--------------- 170 (224)
T ss_pred ----------------CCCCEEEEEecCChhhc-cCHHHHHHHHHhC--CCeEEEEEeCCCCcCC---------------
Confidence 14679999999999987 5778888877643 4577776666431100
Q ss_pred ccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 816 AKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 816 ~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.| +.|+.+ +.+.+... +.....||+|||++|++++++.+.+.+. ..-.+|.|.|
T Consensus 171 --------~g-----~~g~v~-~~l~~~~~---~~~~~~v~vCGp~~m~~~~~~~l~~~G~---~~~~i~~e~f 224 (224)
T cd06189 171 --------QG-----RTGLVH-EAVLEDFP---DLSDFDVYACGSPEMVYAARDDFVEKGL---PEENFFSDAF 224 (224)
T ss_pred --------cc-----ccccHH-HHHHhhcc---CccccEEEEECCHHHHHHHHHHHHHcCC---CHHHcccCCC
Confidence 00 011211 11111111 1123579999999999999999987643 3456788887
|
Structurally similar to ferredoxin reductases, but with only 15% sequence identity, flavin reductases reduce FAD, FMN, or riboflavin via NAD(P)H. Flavin is used as a substrate, rather than a tightly bound prosthetic group as in flavoenzymes; weaker binding is due to the absence of a binding site for the AMP moeity of FAD. |
| >cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-26 Score=237.34 Aligned_cols=207 Identities=22% Similarity=0.404 Sum_probs=153.4
Q ss_pred CCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEecCcchHHHHHHHhhccCCCCCCCc
Q 002711 588 GNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQS 665 (889)
Q Consensus 588 ~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s 665 (889)
.++.+|++..+.+ +.|+|||||.|++|..+.+++|||||+|.|.+ +.++|+||..|++|+.|.+.+
T Consensus 7 ~~~~~i~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~l~l~vk~~G~~t~~l~~~l------------ 74 (216)
T cd06198 7 RPTTTLTLEPRGPALGHRAGQFAFLRFDASGWEEPHPFTISSAPDPDGRLRFTIKALGDYTRRLAERL------------ 74 (216)
T ss_pred cceEEEEEeeCCCCCCcCCCCEEEEEeCCCCCCCCCCcEEecCCCCCCeEEEEEEeCChHHHHHHHhC------------
Confidence 3677888876665 78999999999998766679999999999876 599999999999999997543
Q ss_pred cccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcC
Q 002711 666 GLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKN 745 (889)
Q Consensus 666 ~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~ 745 (889)
++|+ +|.|.||||.+..+.. ++.++|||||+||||++|+++++..+.
T Consensus 75 -------~~G~------~v~i~gP~G~~~~~~~-~~~~vlia~GtGiap~~~~l~~~~~~~------------------- 121 (216)
T cd06198 75 -------KPGT------RVTVEGPYGRFTFDDR-RARQIWIAGGIGITPFLALLEALAARG------------------- 121 (216)
T ss_pred -------CCCC------EEEEECCCCCCccccc-CceEEEEccccCHHHHHHHHHHHHhcC-------------------
Confidence 2566 8999999999764333 689999999999999999999986531
Q ss_pred CCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccC
Q 002711 746 SKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSG 825 (889)
Q Consensus 746 ~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg 825 (889)
..++++++|++|+.+++ +|.++|+++.... .+.++...+...
T Consensus 122 ------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~---~~~~~~~~~~~~---------------------------- 163 (216)
T cd06198 122 ------DARPVTLFYCVRDPEDA-VFLDELRALAAAA---GVVLHVIDSPSD---------------------------- 163 (216)
T ss_pred ------CCceEEEEEEECCHHHh-hhHHHHHHHHHhc---CeEEEEEeCCCC----------------------------
Confidence 14689999999999986 6888888876543 455655333210
Q ss_pred CccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 826 TRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 826 ~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
++.+...++.... .+.....||+|||++|++++++.+.+.+ ...-.+|.|.|
T Consensus 164 -------~~~~~~~~~~~~~--~~~~~~~vyicGp~~m~~~v~~~l~~~G---v~~~~I~~E~f 215 (216)
T cd06198 164 -------GRLTLEQLVRALV--PDLADADVWFCGPPGMADALEKGLRALG---VPARRFHYERF 215 (216)
T ss_pred -------cccchhhhhhhcC--CCcCCCeEEEECcHHHHHHHHHHHHHcC---CChHhcchhhc
Confidence 1111111111111 1123457999999999999999998753 23445677776
|
The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH. |
| >cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=240.18 Aligned_cols=231 Identities=18% Similarity=0.288 Sum_probs=174.8
Q ss_pred cccEEEEEEEEecCCEEEEEEecCCC---CccCCccEEEEEEcCCC--CCcccceeeeecCCCCceEEEEEec--CcchH
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVS--QFQWHPFSITSAPGDDYLSIHIRTL--GDWTS 647 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is--~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~ 647 (889)
+..++|.+++.+++++.+|++..|.. +.|+||||+.|.++..+ ...+|||||+|.|.++.+.|+||.. |..|+
T Consensus 6 ~~~~~v~~~~~~s~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~ySi~s~~~~~~l~~~ik~~~~G~~s~ 85 (247)
T cd06184 6 FRPFVVARKVAESEDITSFYLEPADGGPLPPFLPGQYLSVRVKLPGLGYRQIRQYSLSDAPNGDYYRISVKREPGGLVSN 85 (247)
T ss_pred cEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCCceeEEeEeccCCCCCeEEEEEEEcCCCcchH
Confidence 45678889999999999999998753 68999999999997543 4689999999999888999999988 88888
Q ss_pred HHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHh
Q 002711 648 QLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK 727 (889)
Q Consensus 648 ~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~ 727 (889)
.|.+.+ ++|+ ++.|.||||.+..+...++.++|||||+||||++++++++.++.
T Consensus 86 ~l~~~~-------------------~~Gd------~v~i~gP~G~~~~~~~~~~~llliagGtGiaP~~~~l~~~~~~~- 139 (247)
T cd06184 86 YLHDNV-------------------KVGD------VLEVSAPAGDFVLDEASDRPLVLISAGVGITPMLSMLEALAAEG- 139 (247)
T ss_pred HHHhcC-------------------CCCC------EEEEEcCCCceECCCCCCCcEEEEeccccHhHHHHHHHHHHhcC-
Confidence 876532 2677 89999999997654435678999999999999999999987541
Q ss_pred hhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHH
Q 002711 728 QQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALI 807 (889)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~ 807 (889)
..++++|+|++|+.+++ +|.++|+++++.. .+++++.++++..+...
T Consensus 140 ------------------------~~~~i~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~~~~------ 186 (247)
T cd06184 140 ------------------------PGRPVTFIHAARNSAVH-AFRDELEELAARL--PNLKLHVFYSEPEAGDR------ 186 (247)
T ss_pred ------------------------CCCcEEEEEEcCchhhH-HHHHHHHHHHhhC--CCeEEEEEECCCCcccc------
Confidence 14679999999999985 6888888886542 46788887775321100
Q ss_pred HHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEee
Q 002711 808 TMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKE 887 (889)
Q Consensus 808 ~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E 887 (889)
. ....+.||++...+.+ . .+.....||+|||++|++++++.+.+.+. ..-.+|.|
T Consensus 187 ---------------~---~~~~~~g~~~~~~l~~-~---~~~~~~~v~icGp~~m~~~v~~~l~~~G~---~~~~i~~e 241 (247)
T cd06184 187 ---------------E---EDYDHAGRIDLALLRE-L---LLPADADFYLCGPVPFMQAVREGLKALGV---PAERIHYE 241 (247)
T ss_pred ---------------c---ccccccCccCHHHHhh-c---cCCCCCEEEEECCHHHHHHHHHHHHHcCC---CHHHeeee
Confidence 0 0112346776544333 1 11234689999999999999999987643 33457777
Q ss_pred CC
Q 002711 888 NF 889 (889)
Q Consensus 888 ~F 889 (889)
.|
T Consensus 242 ~f 243 (247)
T cd06184 242 VF 243 (247)
T ss_pred cc
Confidence 76
|
Flavohemoglobins have a globin domain containing a B-type heme fused with a ferredoxin reductase-like FAD/NAD-binding domain. Flavohemoglobins detoxify nitric oxide (NO) via an NO dioxygenase reaction. The hemoglobin domain adopts a globin fold with an embedded heme molecule. Flavohemoglobins also have a C-terminal reductase domain with bindiing sites for FAD and NAD(P)H. This domain catalyzes the conversion of NO + O2 + NAD(P)H to NO3- + NAD(P)+. Instead of the oxygen transport function of hemoglobins, flavohemoglobins seem to act in NO dioxygenation and NO signalling. |
| >PRK08051 fre FMN reductase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=237.30 Aligned_cols=223 Identities=18% Similarity=0.258 Sum_probs=161.8
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecC-CCCceEEEEEecCc--chHHHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSIHIRTLGD--WTSQLKSI 652 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP-~~~~l~l~Ir~~G~--wT~~L~~~ 652 (889)
..++|.++..+++++..|++..+..+.|+||||++|++|.. +.|||||+|.| +++.++|+||..++ .+..+.+.
T Consensus 3 ~~~~v~~i~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~---~~r~ySias~p~~~~~l~~~v~~~~~~~~~~~~~~~ 79 (232)
T PRK08051 3 LSCKVTSVEAITDTVYRVRLVPEAPFSFRAGQYLMVVMGEK---DKRPFSIASTPREKGFIELHIGASELNLYAMAVMER 79 (232)
T ss_pred eEEEEEEEecCCCCeEEEEEecCCCCccCCCCEEEEEcCCC---cceeecccCCCCCCCcEEEEEEEcCCCcchHHHHHH
Confidence 35788899999999999999887788999999999999763 67999999999 47889999999754 45555433
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhc
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEI 732 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~ 732 (889)
+ ++|+ +|.|+||||.+..+....+.+||||||+||||++|+++++....
T Consensus 80 l-------------------~~G~------~v~v~gP~G~~~~~~~~~~~~vliagG~GiaP~~~~l~~~~~~~------ 128 (232)
T PRK08051 80 I-------------------LKDG------EIEVDIPHGDAWLREESERPLLLIAGGTGFSYARSILLTALAQG------ 128 (232)
T ss_pred c-------------------CCCC------EEEEEcCCCceEccCCCCCcEEEEecCcCcchHHHHHHHHHHhC------
Confidence 2 3676 89999999998644334578999999999999999999987541
Q ss_pred ccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHh
Q 002711 733 EEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQS 812 (889)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~ 812 (889)
..++++++|++|+.+++ +|.++|.++++.. .++.++..+++..+ ..
T Consensus 129 -------------------~~~~v~l~~g~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~~~~~~-~~----------- 174 (232)
T PRK08051 129 -------------------PNRPITLYWGGREEDHL-YDLDELEALALKH--PNLHFVPVVEQPEE-GW----------- 174 (232)
T ss_pred -------------------CCCcEEEEEEeccHHHh-hhhHHHHHHHHHC--CCcEEEEEeCCCCC-Cc-----------
Confidence 14679999999999997 7899898887654 35666654432110 00
Q ss_pred hhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHH-HhhhcCCCCcEEEEeeCC
Q 002711 813 IHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLS-QDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 813 l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~-~~~~~~~~~~f~fh~E~F 889 (889)
.| ..|+.. +.+++.... .....||+|||++|++.+++.+ .+.+- ..-.+|.|.|
T Consensus 175 -----------~~-----~~g~v~-~~l~~~~~~---~~~~~vyicGp~~m~~~v~~~l~~~~G~---~~~~i~~e~f 229 (232)
T PRK08051 175 -----------QG-----KTGTVL-TAVMQDFGS---LAEYDIYIAGRFEMAKIARELFCRERGA---REEHLFGDAF 229 (232)
T ss_pred -----------cc-----ceeeeh-HHHHhhccC---cccCEEEEECCHHHHHHHHHHHHHHcCC---CHHHeecccc
Confidence 01 012221 222222211 1234699999999999999988 76532 3345677776
|
|
| >cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=234.79 Aligned_cols=225 Identities=22% Similarity=0.355 Sum_probs=169.1
Q ss_pred EEEEEEEecCCEEEEEEecCCC--CccCCccEEEEEEcCCCCCcccceeeeecCCCC-ceEEEEEec--CcchHHHHHHH
Q 002711 579 RILKVAVYPGNVLALQMSKPQG--FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD-YLSIHIRTL--GDWTSQLKSIF 653 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~~--~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~-~l~l~Ir~~--G~wT~~L~~~~ 653 (889)
+|+++..+++++..++++.|.. +.|+||||+.|.+|..+...+|||||+|+|.++ .+.|+||.. |..|+.|.+.+
T Consensus 2 ~v~~~~~~t~~~~~~~l~~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~~~~l~~~vk~~~~G~~s~~l~~~~ 81 (231)
T cd06215 2 RCVKIIQETPDVKTFRFAAPDGSLFAYKPGQFLTLELEIDGETVYRAYTLSSSPSRPDSLSITVKRVPGGLVSNWLHDNL 81 (231)
T ss_pred eEEEEEEcCCCeEEEEEECCCCCcCCcCCCCeEEEEEecCCCeEEEeeecccCCCCCCcEEEEEEEcCCCcchHHHHhcC
Confidence 6778888999999999998876 789999999999986665668999999998754 699999998 88888776433
Q ss_pred hhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcc
Q 002711 654 AKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIE 733 (889)
Q Consensus 654 ~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~ 733 (889)
++|+ .+.|.||||.+.......+.+||||||+||||+++++++++...
T Consensus 82 -------------------~~G~------~v~i~gP~G~f~~~~~~~~~~vlIagG~Giap~~~~l~~~~~~~------- 129 (231)
T cd06215 82 -------------------KVGD------ELWASGPAGEFTLIDHPADKLLLLSAGSGITPMMSMARWLLDTR------- 129 (231)
T ss_pred -------------------CCCC------EEEEEcCcceeEeCCCCCCcEEEEecCcCcchHHHHHHHHHhcC-------
Confidence 2566 89999999997643334678999999999999999999986531
Q ss_pred cccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhh
Q 002711 734 EGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSI 813 (889)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l 813 (889)
..++++++|++|+.+++ .+.+.|+++.+.. ..++++.++|+....
T Consensus 130 ------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~~~~~~~-------------- 174 (231)
T cd06215 130 ------------------PDADIVFIHSARSPADI-IFADELEELARRH--PNFRLHLILEQPAPG-------------- 174 (231)
T ss_pred ------------------CCCcEEEEEecCChhhh-hHHHHHHHHHHHC--CCeEEEEEEccCCCC--------------
Confidence 14679999999999987 4778888877643 358888777753210
Q ss_pred hcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 814 HHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 814 ~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
......||.+.. ++++..... ....||+|||++|++.+++.+.+... ..-.+|.|.|
T Consensus 175 -------------~~~~~~g~~~~~-~l~~~~~~~--~~~~v~icGp~~m~~~~~~~l~~~gv---~~~~i~~e~f 231 (231)
T cd06215 175 -------------AWGGYRGRLNAE-LLALLVPDL--KERTVFVCGPAGFMKAVKSLLAELGF---PMSRFHQESF 231 (231)
T ss_pred -------------cccccCCcCCHH-HHHHhcCCc--cCCeEEEECCHHHHHHHHHHHHHcCC---CHHHeeeecC
Confidence 001123666533 333332221 23479999999999999999987643 3445677877
|
Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal portion of the FAD/NAD binding domain contains most of the NADP(H) binding residues and the N-terminal sub-domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. In this ferredoxin like sub-group, the FAD/NAD sub-domains is typically fused to a C-terminal iron-sulfur binding domain. Iron-sulfur pr |
| >cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-25 Score=234.57 Aligned_cols=229 Identities=17% Similarity=0.264 Sum_probs=168.8
Q ss_pred cccEEEEEEEEecCCEEEEEEecCCC--CccCCccEEEEEEcCC-CCCcccceeeeecCCC-CceEEEEEec--CcchHH
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKPQG--FKYTSGQYIFVNCAAV-SQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQ 648 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~l~~~~p~~--~~~~pGQyv~l~~p~i-s~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~ 648 (889)
|..++|.+++.+++++.++++..|.. +.|+||||+.|++|.. +...+|||||+|.|.+ +.+.|+||.. |..|..
T Consensus 1 ~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~r~ySi~s~~~~~~~l~l~v~~~~~G~~s~~ 80 (235)
T cd06217 1 WRVLRVTEIIQETPTVKTFRLAVPDGVPPPFLAGQHVDLRLTAIDGYTAQRSYSIASSPTQRGRVELTVKRVPGGEVSPY 80 (235)
T ss_pred CceEEEEEEEecCCCeEEEEEECCCCCcCCcCCcCeEEEEEecCCCceeeeeecccCCCCCCCeEEEEEEEcCCCcchHH
Confidence 45788999999999999999998876 7899999999999843 3356799999999865 5899999987 557777
Q ss_pred HHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhh
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQ 728 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~ 728 (889)
|.+.+ ++|+ +|.|.||||.+..+....+.++|||||+||||+++++++++++.
T Consensus 81 l~~~l-------------------~~Gd------~v~i~gP~G~~~~~~~~~~~~vliagG~Giap~~~~~~~~~~~~-- 133 (235)
T cd06217 81 LHDEV-------------------KVGD------LLEVRGPIGTFTWNPLHGDPVVLLAGGSGIVPLMSMIRYRRDLG-- 133 (235)
T ss_pred HHhcC-------------------CCCC------EEEEeCCceeeEeCCCCCceEEEEecCcCccHHHHHHHHHHhcC--
Confidence 76533 2576 89999999997543334678999999999999999999987541
Q ss_pred hhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHH
Q 002711 729 QKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALIT 808 (889)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~ 808 (889)
..++++++|++|+.+++ ++.++|.++++.. ..+.++.++|+..+.+
T Consensus 134 -----------------------~~~~i~l~~~~r~~~~~-~~~~el~~~~~~~--~~~~~~~~~s~~~~~~-------- 179 (235)
T cd06217 134 -----------------------WPVPFRLLYSARTAEDV-IFRDELEQLARRH--PNLHVTEALTRAAPAD-------- 179 (235)
T ss_pred -----------------------CCceEEEEEecCCHHHh-hHHHHHHHHHHHC--CCeEEEEEeCCCCCCC--------
Confidence 14679999999999986 6888888877643 3577777666421000
Q ss_pred HHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeC
Q 002711 809 MLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKEN 888 (889)
Q Consensus 809 ~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~ 888 (889)
. ..+.||.+.. ++++.... .....||+|||++|++++++.+.+.+. ..=.+|.|.
T Consensus 180 --------------~-----~~~~g~~~~~-~l~~~~~~--~~~~~v~icGp~~m~~~v~~~l~~~Gv---~~~~i~~E~ 234 (235)
T cd06217 180 --------------W-----LGPAGRITAD-LIAELVPP--LAGRRVYVCGPPAFVEAATRLLLELGV---PRDRIRTEA 234 (235)
T ss_pred --------------c-----CCcCcEeCHH-HHHhhCCC--ccCCEEEEECCHHHHHHHHHHHHHcCC---CHHHEeecc
Confidence 0 1123565532 23332111 123579999999999999999987643 233467787
Q ss_pred C
Q 002711 889 F 889 (889)
Q Consensus 889 F 889 (889)
|
T Consensus 235 f 235 (235)
T cd06217 235 F 235 (235)
T ss_pred C
Confidence 7
|
Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form |
| >cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=234.70 Aligned_cols=226 Identities=18% Similarity=0.272 Sum_probs=165.5
Q ss_pred EEEEEEEecCCEEEEEEecCCC--CccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEec--CcchHHHHHHHh
Q 002711 579 RILKVAVYPGNVLALQMSKPQG--FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSIFA 654 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~~--~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~~L~~~~~ 654 (889)
+|++++.+++++.++++..|.. +.|+||||+.|.++..+...+|||||+|.|.++.++|+||.. |.+|..|.+.+
T Consensus 2 ~v~~i~~~t~~~~~~~l~~~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~l~~~v~~~~~G~~s~~l~~~~- 80 (231)
T cd06191 2 RVAEVRSETPDAVTIVFAVPGPLQYGFRPGQHVTLKLDFDGEELRRCYSLCSSPAPDEISITVKRVPGGRVSNYLREHI- 80 (231)
T ss_pred EEEEEEecCCCcEEEEEeCCCCCCCCCCCCCeEEEEEecCCeEEeeeeeccCCCCCCeEEEEEEECCCCccchHHHhcC-
Confidence 5778888999999999997654 689999999999975555678999999998878899999988 77888886433
Q ss_pred hccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 655 KVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 655 ~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ ++.|.||||.+..+....+.+||||||+||||++|++++++...
T Consensus 81 ------------------~~Gd------~v~i~gP~G~f~l~~~~~~~~lliagG~Gitp~~s~~~~~~~~~-------- 128 (231)
T cd06191 81 ------------------QPGM------TVEVMGPQGHFVYQPQPPGRYLLVAAGSGITPLMAMIRATLQTA-------- 128 (231)
T ss_pred ------------------CCCC------EEEEeCCccceEeCCCCCCcEEEEecCccHhHHHHHHHHHHhcC--------
Confidence 2677 89999999997544334578999999999999999999986431
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..++++++|++|+.+++ +|.++|+++++.. ..++++.++|+.....+
T Consensus 129 -----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~------------- 175 (231)
T cd06191 129 -----------------PESDFTLIHSARTPADM-IFAQELRELADKP--QRLRLLCIFTRETLDSD------------- 175 (231)
T ss_pred -----------------CCCCEEEEEecCCHHHH-hHHHHHHHHHHhC--CCeEEEEEECCCCCCcc-------------
Confidence 14679999999999987 5788888887542 46888777765321100
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
..+.+ |+- -..+.+.+... .....||+|||++|++++++.+.+.+ ...-.+|.|.|
T Consensus 176 --------~~~~~-----~~~-~~~l~~~~~~~--~~~~~vyicGp~~mv~~~~~~l~~~G---~~~~~i~~E~f 231 (231)
T cd06191 176 --------LLHGR-----IDG-EQSLGAALIPD--RLEREAFICGPAGMMDAVETALKELG---MPPERIHTERF 231 (231)
T ss_pred --------ccCCc-----ccc-cHHHHHHhCcc--ccCCeEEEECCHHHHHHHHHHHHHcC---CCHHHeeeccC
Confidence 00000 111 12233222111 12347999999999999999997754 23445777887
|
FNR was intially identified as a chloroplast reductase activity catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methnae assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in |
| >cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=233.16 Aligned_cols=222 Identities=16% Similarity=0.269 Sum_probs=165.1
Q ss_pred cEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSIF 653 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~~ 653 (889)
..+|.+++.+++++.++++..|..+.|+||||+.|++|... .+|||||+|+|.+ +.++|+||.. |.+|+.|.+.+
T Consensus 2 ~~~v~~~~~~t~~~~~~~l~~~~~~~~~pGQ~~~l~~~~~~--~~r~ysi~s~~~~~~~l~~~vk~~~~G~~s~~l~~~l 79 (227)
T cd06213 2 RGTIVAQERLTHDIVRLTVQLDRPIAYKAGQYAELTLPGLP--AARSYSFANAPQGDGQLSFHIRKVPGGAFSGWLFGAD 79 (227)
T ss_pred eEEEEEEeecCCCEEEEEEecCCCCCcCCCCEEEEEeCCCC--cccccccCCCCCCCCEEEEEEEECCCCcchHHHHhcC
Confidence 35788888999999999999877788999999999998654 6899999999874 7899999987 88999886543
Q ss_pred hhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcc
Q 002711 654 AKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIE 733 (889)
Q Consensus 654 ~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~ 733 (889)
++|+ .|.|.||||.+..+ ...+.+||||||+||||++++++++..+.
T Consensus 80 -------------------~~G~------~v~i~gP~G~~~~~-~~~~~~lliagG~GiaP~~~~~~~~~~~~------- 126 (227)
T cd06213 80 -------------------RTGE------RLTVRGPFGDFWLR-PGDAPILCIAGGSGLAPILAILEQARAAG------- 126 (227)
T ss_pred -------------------CCCC------EEEEeCCCcceEeC-CCCCcEEEEecccchhHHHHHHHHHHhcC-------
Confidence 2576 89999999998643 23478999999999999999999986531
Q ss_pred cccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhh
Q 002711 734 EGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSI 813 (889)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l 813 (889)
..++++++|++|+.+++ ++.+++.++++... ..+.++.++++..+..+
T Consensus 127 ------------------~~~~i~l~~~~r~~~~~-~~~~~l~~l~~~~~-~~~~~~~~~s~~~~~~~------------ 174 (227)
T cd06213 127 ------------------TKRDVTLLFGARTQRDL-YALDEIAAIAARWR-GRFRFIPVLSEEPADSS------------ 174 (227)
T ss_pred ------------------CCCcEEEEEeeCCHHHh-ccHHHHHHHHHhcc-CCeEEEEEecCCCCCCC------------
Confidence 24679999999999886 67788888775422 45777766654211000
Q ss_pred hcccCCCccccCCccccccCCC-CHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 814 HHAKNGLDIVSGTRVKTHFARP-NWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 814 ~~~~~~~d~~sg~~~~~~~GRP-d~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
..|++ ...+.+.+.. . ....||+|||++|++.+++.+.+.+. ..-.+|.|.|
T Consensus 175 -----------------~~g~~g~v~~~l~~~~---~-~~~~v~~CGp~~~~~~~~~~l~~~G~---~~~~i~~e~f 227 (227)
T cd06213 175 -----------------WKGARGLVTEHIAEVL---L-AATEAYLCGPPAMIDAAIAVLRALGI---AREHIHADRF 227 (227)
T ss_pred -----------------ccCCcccHHHHHHhhc---c-CCCEEEEECCHHHHHHHHHHHHHcCC---CHHHEeccCC
Confidence 00121 2223333322 1 23479999999999999999987542 3445777877
|
Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate while mono-oxygenases add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate. |
| >cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=233.07 Aligned_cols=216 Identities=21% Similarity=0.289 Sum_probs=160.5
Q ss_pred EEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHHHhhcc
Q 002711 581 LKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSIFAKVC 657 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~~~~~~ 657 (889)
.+++.+++++++++++.|..+.|+||||++|++|.. ..|||||+|.|.+ +.+.|+||.. |.+|..|.+.+
T Consensus 2 ~~~~~~~~~~~~i~l~~~~~~~~~pGQ~v~l~~~~~---~~r~ySi~s~~~~~~~~~~~i~~~~~G~~s~~l~~~~---- 74 (222)
T cd06194 2 VSLQRLSPDVLRVRLEPDRPLPYLPGQYVNLRRAGG---LARSYSPTSLPDGDNELEFHIRRKPNGAFSGWLGEEA---- 74 (222)
T ss_pred ceeeecCCCEEEEEEecCCCCCcCCCCEEEEEcCCC---CceeeecCCCCCCCCEEEEEEEeccCCccchHHHhcc----
Confidence 467788899999999988889999999999999863 5699999999876 7899999986 66888877643
Q ss_pred CCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCC-CCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccccc
Q 002711 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY-KDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGI 736 (889)
Q Consensus 658 ~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~-~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~ 736 (889)
++|+ +|.|.||||.+.... ..++.+++||||+||||+++++++++...
T Consensus 75 ---------------~~G~------~v~i~gP~G~~~~~~~~~~~~~v~iagG~Giap~~~~l~~~~~~~---------- 123 (222)
T cd06194 75 ---------------RPGH------ALRLQGPFGQAFYRPEYGEGPLLLVGAGTGLAPLWGIARAALRQG---------- 123 (222)
T ss_pred ---------------CCCC------EEEEecCcCCeeccCCCCCCCEEEEecCcchhhHHHHHHHHHhcC----------
Confidence 2566 899999999986432 45678999999999999999999987431
Q ss_pred ccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcc
Q 002711 737 TEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHA 816 (889)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~ 816 (889)
..++++++|++|+.+++ +|.++++++++.. ..++++..+++.... .
T Consensus 124 ---------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~~~~~~~-~--------------- 169 (222)
T cd06194 124 ---------------HQGEIRLVHGARDPDDL-YLHPALLWLAREH--PNFRYIPCVSEGSQG-D--------------- 169 (222)
T ss_pred ---------------CCccEEEEEecCChhhc-cCHHHHHHHHHHC--CCeEEEEEEccCCCC-C---------------
Confidence 14679999999999986 6888888887643 357776666542110 0
Q ss_pred cCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 817 KNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 817 ~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
++.....+...+.. ......||+|||++|++++++.+.+.. -..-.+|.|.|
T Consensus 170 ----------------~~~~~~~~~~~~~~--~~~~~~vyicGp~~m~~~~~~~L~~~G---v~~~~i~~e~f 221 (222)
T cd06194 170 ----------------PRVRAGRIAAHLPP--LTRDDVVYLCGAPSMVNAVRRRAFLAG---APMKRIYADPF 221 (222)
T ss_pred ----------------cccccchhhhhhcc--ccCCCEEEEeCCHHHHHHHHHHHHHcC---CCHHHeeeccc
Confidence 00011122222211 112357999999999999999988753 33445777776
|
Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second e |
| >cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-25 Score=232.82 Aligned_cols=227 Identities=13% Similarity=0.197 Sum_probs=163.9
Q ss_pred EEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHHHhhcc
Q 002711 581 LKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSIFAKVC 657 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~~~~~~ 657 (889)
++++.+++++.+|++..+..+.|+||||++|++|..+ .+|||||+|.|.+ +.++|+||.. |.+|+.|.+.+
T Consensus 2 ~~~~~~t~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~--~~r~ySi~s~~~~~~~~~~~vk~~~~G~~s~~l~~~~---- 75 (232)
T cd06190 2 VDVRELTHDVAEFRFALDGPADFLPGQYALLALPGVE--GARAYSMANLANASGEWEFIIKRKPGGAASNALFDNL---- 75 (232)
T ss_pred CceEEcCCCEEEEEEEcCCccccCCCCEEEEECCCCC--cccCccCCcCCCCCCEEEEEEEEcCCCcchHHHhhcC----
Confidence 4567788999999999888889999999999998754 6799999999875 7899999987 77898887633
Q ss_pred CCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccc
Q 002711 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGIT 737 (889)
Q Consensus 658 ~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~ 737 (889)
++|+ +|.|.||||.+.......+.+||||||+||||++|+++++..+...
T Consensus 76 ---------------~~g~------~v~v~gP~G~~~~~~~~~~~illIagG~GiaP~~~~l~~~~~~~~~--------- 125 (232)
T cd06190 76 ---------------EPGD------ELELDGPYGLAYLRPDEDRDIVCIAGGSGLAPMLSILRGAARSPYL--------- 125 (232)
T ss_pred ---------------CCCC------EEEEECCcccceecCCCCCcEEEEeeCcCHHHHHHHHHHHHhcccC---------
Confidence 2566 7999999999864334467899999999999999999998653110
Q ss_pred cCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhccc
Q 002711 738 EDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAK 817 (889)
Q Consensus 738 ~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~ 817 (889)
...+++++|++|+.+++ .|.+++.++.+.. ..+.++..+|+.......
T Consensus 126 --------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~~--------------- 173 (232)
T cd06190 126 --------------SDRPVDLFYGGRTPSDL-CALDELSALVALG--ARLRVTPAVSDAGSGSAA--------------- 173 (232)
T ss_pred --------------CCCeEEEEEeecCHHHH-hhHHHHHHHHHhC--CCEEEEEEeCCCCCCcCC---------------
Confidence 24689999999999987 5788888887653 457777666542111000
Q ss_pred CCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 818 NGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 818 ~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
... .+.|+.. +.+.+..... .....||+|||++|++.+++...+.... ..=.+|.|.|
T Consensus 174 ----~~~-----~~~g~v~--~~l~~~~~~~-~~~~~vyiCGp~~m~~~v~~~l~~~g~~--~~~~i~~e~f 231 (232)
T cd06190 174 ----GWD-----GPTGFVH--EVVEATLGDR-LAEFEFYFAGPPPMVDAVQRMLMIEGVV--PFDQIHFDRF 231 (232)
T ss_pred ----Ccc-----CCcCcHH--HHHHhhccCC-ccccEEEEECCHHHHHHHHHHHHHhCCC--ChHheeeccc
Confidence 000 1113322 3343332221 1245799999999999999988775321 1335677877
|
Electron transfer is from NADH to an NADH:ferredoxin oxidoreductase (TmoF in P. mendocina) to ferredoxin to an iron-containing oxygenase. TmoF is homologous to other mono- and dioxygenase systems within the ferredoxin reductase family. |
| >cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-25 Score=232.39 Aligned_cols=225 Identities=17% Similarity=0.310 Sum_probs=164.6
Q ss_pred cEEEEEEEEecCCEEEEEEecCC--CCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQ--GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKS 651 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~--~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~ 651 (889)
.++|.+++.+++++.++++..+. .+.|+||||+.|.+|... ++|||||+|.|.+ +.+.|+||.. |.+|..|.+
T Consensus 2 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~~~~~--~~r~ySi~s~~~~~~~l~l~vk~~~~G~~s~~l~~ 79 (232)
T cd06212 2 VGTVVAVEALTHDIRRLRLRLEEPEPIKFFAGQYVDITVPGTE--ETRSFSMANTPADPGRLEFIIKKYPGGLFSSFLDD 79 (232)
T ss_pred ceEEEEEeecCCCeEEEEEEcCCCCcCCcCCCCeEEEEcCCCC--cccccccCCCCCCCCEEEEEEEECCCCchhhHHhh
Confidence 46788999999999999997544 578999999999998643 7899999999975 8899999997 667887765
Q ss_pred HHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhh
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKE 731 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~ 731 (889)
.+ ++|+ ++.|.||||.+......++.+||||||+||||++|+++++....
T Consensus 80 ~l-------------------~~G~------~v~i~gP~G~~~~~~~~~~~~l~iagG~Giap~~~~l~~~~~~~----- 129 (232)
T cd06212 80 GL-------------------AVGD------PVTVTGPYGTCTLRESRDRPIVLIGGGSGMAPLLSLLRDMAASG----- 129 (232)
T ss_pred cC-------------------CCCC------EEEEEcCcccceecCCCCCcEEEEecCcchhHHHHHHHHHHhcC-----
Confidence 33 2566 89999999998754345679999999999999999999987541
Q ss_pred cccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHH
Q 002711 732 IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQ 811 (889)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~ 811 (889)
..++++|+|++|+.+++ ++.++++++++.. .++.++..+++.... +
T Consensus 130 --------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~~-~---------- 175 (232)
T cd06212 130 --------------------SDRPVRFFYGARTARDL-FYLEEIAALGEKI--PDFTFIPALSESPDD-E---------- 175 (232)
T ss_pred --------------------CCCcEEEEEeccchHHh-ccHHHHHHHHHhC--CCEEEEEEECCCCCC-C----------
Confidence 13679999999999987 5678888877643 356666555532110 0
Q ss_pred hhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 812 SIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 812 ~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
...+ ..|+ +.+.+.+..... ....||+|||++|++.+.+.+.+.+. ..-.+|.|.|
T Consensus 176 ----------~~~~-----~~g~--~~~~~~~~~~~~--~~~~v~~CGp~~~~~~v~~~l~~~G~---~~~~i~~e~f 231 (232)
T cd06212 176 ----------GWSG-----ETGL--VTEVVQRNEATL--AGCDVYLCGPPPMIDAALPVLEMSGV---PPDQIFYDKF 231 (232)
T ss_pred ----------CCcC-----Cccc--HHHHHHhhccCc--cCCEEEEECCHHHHHHHHHHHHHcCC---CHHHeeeccc
Confidence 0011 0122 223333322211 23469999999999999999987643 3456788877
|
These flavoprotein monooxygenases use molecular oxygen as a substrate and require reduced FAD. One atom of oxygen is incorportated into the aromatic compond, while the other is used to form a molecule of water. In contrast dioxygenases add both atoms of oxygen to the substrate. |
| >cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-25 Score=231.05 Aligned_cols=221 Identities=19% Similarity=0.292 Sum_probs=165.7
Q ss_pred cEEEEEEEEecCCEEEEEEecCC--CCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEec--CcchHHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQ--GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSI 652 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~--~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~~L~~~ 652 (889)
.++|++++.+++++.+|+++.|. .+.|+||||+.|++|.. .++|||||+|.|.++.+.|+||.. |..|+.|.+.
T Consensus 3 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~~~~--~~~r~ysi~s~~~~~~i~~~i~~~~~G~~s~~l~~~ 80 (228)
T cd06209 3 EATVTEVERLSDSTIGLTLELDEAGALAFLPGQYVNLQVPGT--DETRSYSFSSAPGDPRLEFLIRLLPGGAMSSYLRDR 80 (228)
T ss_pred eEEEEEEEEcCCCeEEEEEEcCCCCcCccCCCCEEEEEeCCC--CcccccccccCCCCCeEEEEEEEcCCCcchhhHHhc
Confidence 46788999999999999999876 68899999999999864 368999999999888999999986 6688887653
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhc
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEI 732 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~ 732 (889)
+ ++|+ ++.|.||||.+..+ ...+.++|||||+||||++|++++++.+.
T Consensus 81 l-------------------~~G~------~v~v~gP~G~~~~~-~~~~~~vlia~GtGIaP~~~ll~~~~~~~------ 128 (228)
T cd06209 81 A-------------------QPGD------RLTLTGPLGSFYLR-EVKRPLLMLAGGTGLAPFLSMLDVLAEDG------ 128 (228)
T ss_pred c-------------------CCCC------EEEEECCcccceec-CCCCeEEEEEcccCHhHHHHHHHHHHhcC------
Confidence 3 2576 79999999998543 23478999999999999999999987541
Q ss_pred ccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHh
Q 002711 733 EEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQS 812 (889)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~ 812 (889)
..++++|+|++|+.+++ .+.++++++.+.. ..++++.++|+... .
T Consensus 129 -------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~-~------------ 173 (228)
T cd06209 129 -------------------SAHPVHLVYGVTRDADL-VELDRLEALAERL--PGFSFRTVVADPDS-W------------ 173 (228)
T ss_pred -------------------CCCcEEEEEecCCHHHh-ccHHHHHHHHHhC--CCeEEEEEEcCCCc-c------------
Confidence 14679999999999886 5678888776654 35888877764211 0
Q ss_pred hhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 813 IHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 813 l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.+. .|+ +.+.+.+.... ..+..||+|||++|++++++.+.+.. -..-.+|.|.|
T Consensus 174 -----------~~~-----~g~--v~~~~~~~~~~--~~~~~v~icGp~~m~~~~~~~l~~~G---~~~~~i~~E~F 227 (228)
T cd06209 174 -----------HPR-----KGY--VTDHLEAEDLN--DGDVDVYLCGPPPMVDAVRSWLDEQG---IEPANFYYEKF 227 (228)
T ss_pred -----------CCC-----cCC--ccHHHHHhhcc--CCCcEEEEeCCHHHHHHHHHHHHHcC---CCHHHEeeecc
Confidence 000 011 22333222111 12457999999999999999998753 33456777877
|
Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. As a Class I bacterial dioxygenases, benzoate dioxygenase like proteins combine an [2Fe-2S] cluster containing N-terminal ferredoxin at the end fused to an FAD/NADP(P) domain. In dioxygenase FAD/NAD(P) binding domain, the reductase transfers 2 electrons from NAD(P)H to the oxygenase which insert into an aromatic substrate, an initial step in microbial aerobic degradation of aromatic rings. Flavin oxidoreductases use flavins as substrates, unlike flavoenzymes which have a flavin prosthetic group. |
| >cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-25 Score=232.23 Aligned_cols=225 Identities=17% Similarity=0.299 Sum_probs=164.5
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCC------CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEec--Ccch
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG------FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDWT 646 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~------~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~--G~wT 646 (889)
..++|++++.+++++..+++..|.+ +.|+||||+.|.+|.. .++|||||+|.|. ++.+.|+||.. |.+|
T Consensus 2 ~~~~v~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~~l~~~i~~~~~G~~s 79 (236)
T cd06210 2 REAEIVAVDRVSSNVVRLRLQPDDAEGAGIAAEFVPGQFVEIEIPGT--DTRRSYSLANTPNWDGRLEFLIRLLPGGAFS 79 (236)
T ss_pred ceEEEEEEeecCCceEEEEEEeCCcccccccCCcCCCCEEEEEcCCC--ccceecccCCCCCCCCEEEEEEEEcCCCccc
Confidence 3567889999999999999998765 7899999999999853 3789999999987 67899999986 6678
Q ss_pred HHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHH
Q 002711 647 SQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNI 726 (889)
Q Consensus 647 ~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~ 726 (889)
..|.+.+ ++|+ ++.|.||||.+..+-..++.++|||||+||||++++++++....
T Consensus 80 ~~l~~~~-------------------~~Gd------~v~i~gP~G~f~l~~~~~~~~vliagGtGiaP~~~~l~~~~~~~ 134 (236)
T cd06210 80 TYLETRA-------------------KVGQ------RLNLRGPLGAFGLRENGLRPRWFVAGGTGLAPLLSMLRRMAEWG 134 (236)
T ss_pred hhhhhCc-------------------CCCC------EEEEecCcceeeecCCCCccEEEEccCcchhHHHHHHHHHHhcC
Confidence 7776523 2677 89999999997543334578999999999999999999986531
Q ss_pred hhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHH
Q 002711 727 KQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSAL 806 (889)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~ 806 (889)
...+++|+|++|+.+++ ++.++|.++++.. .+++++..+++..+..
T Consensus 135 -------------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~~~------ 180 (236)
T cd06210 135 -------------------------EPQEARLFFGVNTEAEL-FYLDELKRLADSL--PNLTVRICVWRPGGEW------ 180 (236)
T ss_pred -------------------------CCceEEEEEecCCHHHh-hhHHHHHHHHHhC--CCeEEEEEEcCCCCCc------
Confidence 13679999999999986 6788888887654 3577777665321000
Q ss_pred HHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEe
Q 002711 807 ITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHK 886 (889)
Q Consensus 807 ~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~ 886 (889)
.| ..|+ ..+.+.+..... .....||+|||++|++.+++.+++.+. ..-.+|.
T Consensus 181 -----------------~~-----~~g~--~~~~l~~~l~~~-~~~~~vyicGp~~m~~~~~~~l~~~G~---~~~~i~~ 232 (236)
T cd06210 181 -----------------EG-----YRGT--VVDALREDLASS-DAKPDIYLCGPPGMVDAAFAAAREAGV---PDEQVYL 232 (236)
T ss_pred -----------------CC-----ccCc--HHHHHHHhhccc-CCCcEEEEeCCHHHHHHHHHHHHHcCC---CHHHeee
Confidence 00 0122 122232221111 123469999999999999999987542 2335777
Q ss_pred eCC
Q 002711 887 ENF 889 (889)
Q Consensus 887 E~F 889 (889)
|.|
T Consensus 233 E~f 235 (236)
T cd06210 233 EKF 235 (236)
T ss_pred ccc
Confidence 876
|
This multicomponent enzyme mediates electron transfer via a hydroxylase (MMOH), a coupling protein, and a reductase which is comprised of an N-terminal [2Fe-2S] ferredoxin domain, an FAD binding subdomain, and an NADH binding subdomain. Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. Dioxygenases add both atom of oxygen to the substrate, while mono-oxygenases add one atom to the substrate and one atom to water. |
| >cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=230.55 Aligned_cols=230 Identities=18% Similarity=0.302 Sum_probs=169.5
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCC----CccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEec--CcchHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG----FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQL 649 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~----~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~~L 649 (889)
+.++|.+++.+++++.++++..|.+ +.|+||||+.|++|..+...+|||||+|.|+++.+.|+||.. |..|..|
T Consensus 2 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GQ~v~l~~~~~g~~~~r~ysi~s~~~~~~l~~~i~~~~~G~~s~~l 81 (241)
T cd06214 2 HPLTVAEVVRETADAVSITFDVPEELRDAFRYRPGQFLTLRVPIDGEEVRRSYSICSSPGDDELRITVKRVPGGRFSNWA 81 (241)
T ss_pred ceEEEEEEEecCCCeEEEEEecCcccCCCCCcCCCCeEEEEeecCCCeeeeeeeecCCCCCCcEEEEEEEcCCCccchhH
Confidence 4678999999999999999998765 589999999999986555689999999999888999999987 6677777
Q ss_pred HHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCC-CCCEEEEEEcCcchhhHHHHHHHHHHHHhh
Q 002711 650 KSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYK-DYDVLLLVGLGIGATPLISIIKDVLNNIKQ 728 (889)
Q Consensus 650 ~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~-~~~~vllVagGiGITP~lsil~~l~~~~~~ 728 (889)
.+.+ ++|+ .+.|.||+|.+..... .++.++|||||+||||+++++++++...
T Consensus 82 ~~~~-------------------~~G~------~v~i~gP~G~~~~~~~~~~~~~llia~GtGiap~~~~~~~~~~~~-- 134 (241)
T cd06214 82 NDEL-------------------KAGD------TLEVMPPAGRFTLPPLPGARHYVLFAAGSGITPVLSILKTALARE-- 134 (241)
T ss_pred Hhcc-------------------CCCC------EEEEeCCccccccCCCCCCCcEEEEecccChhhHHHHHHHHHhcC--
Confidence 5422 2566 7999999999764433 4789999999999999999999987541
Q ss_pred hhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHH
Q 002711 729 QKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALIT 808 (889)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~ 808 (889)
..++++++|++|+..++ +|.++++++.+... ..+.++.++|+.... .
T Consensus 135 -----------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~-~------- 181 (241)
T cd06214 135 -----------------------PASRVTLVYGNRTEASV-IFREELADLKARYP-DRLTVIHVLSREQGD-P------- 181 (241)
T ss_pred -----------------------CCCcEEEEEEeCCHHHh-hHHHHHHHHHHhCc-CceEEEEEecCCCCC-c-------
Confidence 14679999999999987 78888888865432 467776655532100 0
Q ss_pred HHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhh--CCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEe
Q 002711 809 MLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVK--HTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHK 886 (889)
Q Consensus 809 ~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~--~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~ 886 (889)
..+.||++... +.+.... .+.+...||+|||+.|++.+++.+.+... ..=.+|.
T Consensus 182 --------------------~~~~g~~~~~~-~~~~~~~~~~~~~~~~v~icGp~~mv~~v~~~l~~~G~---~~~~i~~ 237 (241)
T cd06214 182 --------------------DLLRGRLDAAK-LNALLKNLLDATEFDEAFLCGPEPMMDAVEAALLELGV---PAERIHR 237 (241)
T ss_pred --------------------ccccCccCHHH-HHHhhhhhcccccCcEEEEECCHHHHHHHHHHHHHcCC---CHHHeec
Confidence 01235665322 2222211 12234679999999999999999887532 3345666
Q ss_pred eCC
Q 002711 887 ENF 889 (889)
Q Consensus 887 E~F 889 (889)
|.|
T Consensus 238 e~f 240 (241)
T cd06214 238 ELF 240 (241)
T ss_pred ccc
Confidence 766
|
PA oxidoreductases of E. coli hydroxylate PA-CoA in the second step of PA degradation. Members of this group typically fuse a ferredoxin reductase-like domain with an iron-sulfur binding cluster domain. Ferredoxins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal portion may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and |
| >cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=230.23 Aligned_cols=220 Identities=16% Similarity=0.290 Sum_probs=161.5
Q ss_pred EEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHHHhhcc
Q 002711 581 LKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSIFAKVC 657 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~~~~~~ 657 (889)
.++..+++++.++++..|..+.|+||||+.|.+|.... .+|||||+|.|.+ +.++|+||.. |.+|+.|.+.+
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~pGq~i~l~~~~~~~-~~r~ysi~s~~~~~~~~~~~i~~~~~G~~s~~l~~~l---- 76 (224)
T cd06187 2 VSVERLTHDIAVVRLQLDQPLPFWAGQYVNVTVPGRPR-TWRAYSPANPPNEDGEIEFHVRAVPGGRVSNALHDEL---- 76 (224)
T ss_pred eeeeecCCCEEEEEEEeCCCCCcCCCceEEEEcCCCCC-cceeccccCCCCCCCEEEEEEEeCCCCcchHHHhhcC----
Confidence 56778889999999998888899999999999986542 6899999999875 7899999998 88998887633
Q ss_pred CCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccc
Q 002711 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGIT 737 (889)
Q Consensus 658 ~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~ 737 (889)
++|+ .+.|.||||.+......++.+||||||+||||++|+++++..+.
T Consensus 77 ---------------~~G~------~v~i~gP~G~~~~~~~~~~~~lliagG~GI~p~~sll~~~~~~~----------- 124 (224)
T cd06187 77 ---------------KVGD------RVRLSGPYGTFYLRRDHDRPVLCIAGGTGLAPLRAIVEDALRRG----------- 124 (224)
T ss_pred ---------------ccCC------EEEEeCCccceEecCCCCCCEEEEecCcCHHHHHHHHHHHHhcC-----------
Confidence 2566 89999999997644334678999999999999999999987531
Q ss_pred cCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhccc
Q 002711 738 EDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAK 817 (889)
Q Consensus 738 ~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~ 817 (889)
..+++.++|++|+.+++ ++.++++++++.. ..+.++.++|+..+..
T Consensus 125 --------------~~~~v~l~~~~~~~~~~-~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~----------------- 170 (224)
T cd06187 125 --------------EPRPVHLFFGARTERDL-YDLEGLLALAARH--PWLRVVPVVSHEEGAW----------------- 170 (224)
T ss_pred --------------CCCCEEEEEecCChhhh-cChHHHHHHHHhC--CCeEEEEEeCCCCCcc-----------------
Confidence 14689999999999986 5677777776543 3566666655421100
Q ss_pred CCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 818 NGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 818 ~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.|. +-.+.+.+.+... +.....||+|||++|++++++.+++.+. ..=.+|.|.|
T Consensus 171 ------~~~-------~g~~~~~~~~~~~--~~~~~~v~vcGp~~~~~~v~~~l~~~G~---~~~~i~~e~f 224 (224)
T cd06187 171 ------TGR-------RGLVTDVVGRDGP--DWADHDIYICGPPAMVDATVDALLARGA---PPERIHFDKF 224 (224)
T ss_pred ------CCC-------cccHHHHHHHhcc--ccccCEEEEECCHHHHHHHHHHHHHcCC---CHHHeeccCC
Confidence 000 1112222222211 1123579999999999999999987643 3445666776
|
Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate, while mono-oxygenases (aka mixed oxygenases) add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate. |
| >cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=230.91 Aligned_cols=227 Identities=17% Similarity=0.242 Sum_probs=166.9
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCCC--ccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEec--CcchHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQGF--KYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDWTSQLK 650 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~~--~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~--G~wT~~L~ 650 (889)
...+|.+++.+++++..+++..|.+. .|+||||+.|.+|... ++|||||+|.|. ++.+.|+||.. |..|+.|.
T Consensus 7 ~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~pGQ~v~l~~~~~~--~~r~ySi~s~~~~~~~l~l~i~~~~~G~~s~~l~ 84 (238)
T cd06211 7 FEGTVVEIEDLTPTIKGVRLKLDEPEEIEFQAGQYVNLQAPGYE--GTRAFSIASSPSDAGEIELHIRLVPGGIATTYVH 84 (238)
T ss_pred EeEEEEEEEecCCCEEEEEEEcCCCCcCccCCCCeEEEEcCCCC--CccccccCCCCCCCCEEEEEEEECCCCcchhhHh
Confidence 45788899999999999999987664 8999999999998642 689999999986 57899999997 77888886
Q ss_pred HHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhh
Q 002711 651 SIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK 730 (889)
Q Consensus 651 ~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~ 730 (889)
+.+ ++|+ +|.|.||||.+.......+.+|+||||+||||++|++++++.+.
T Consensus 85 ~~l-------------------~~G~------~v~i~gP~G~~~~~~~~~~~~v~iagG~GiaP~~~~l~~~~~~~---- 135 (238)
T cd06211 85 KQL-------------------KEGD------ELEISGPYGDFFVRDSDQRPIIFIAGGSGLSSPRSMILDLLERG---- 135 (238)
T ss_pred hcC-------------------CCCC------EEEEECCccceEecCCCCCCEEEEeCCcCHHHHHHHHHHHHhcC----
Confidence 432 2576 89999999998643334478999999999999999999987541
Q ss_pred hcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHH
Q 002711 731 EIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITML 810 (889)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~ 810 (889)
..++++|+|++|+.+++ +|.+++.++++.. .++.++..+++..++ +
T Consensus 136 ---------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l~~~~--~~~~~~~~~s~~~~~-~--------- 181 (238)
T cd06211 136 ---------------------DTRKITLFFGARTRAEL-YYLDEFEALEKDH--PNFKYVPALSREPPE-S--------- 181 (238)
T ss_pred ---------------------CCCcEEEEEecCChhhh-ccHHHHHHHHHhC--CCeEEEEEECCCCCC-c---------
Confidence 13679999999999986 7889898887643 346666555543110 0
Q ss_pred HhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 811 QSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 811 ~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
...| ..||. .+++.+..... .+...||+|||+.|++.+.+.+.+... ..=.+|.|.|
T Consensus 182 -----------~~~~-----~~g~v--~~~l~~~~~~~-~~~~~vyvCGp~~m~~~~~~~L~~~Gv---~~~~i~~e~F 238 (238)
T cd06211 182 -----------NWKG-----FTGFV--HDAAKKHFKND-FRGHKAYLCGPPPMIDACIKTLMQGRL---FERDIYYEKF 238 (238)
T ss_pred -----------Cccc-----ccCcH--HHHHHHhcccc-cccCEEEEECCHHHHHHHHHHHHHcCC---CHHHccccCC
Confidence 0011 11332 23444332211 123579999999999999999987643 2334688877
|
This protein is encoded by a single gene and uses a tightly bound FAD cofactor in the NAD(P)H dependent conversion of phenol and O2 to catechol and H2O. This group is related to the NAD binding ferredoxin reductases. |
| >TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=244.14 Aligned_cols=231 Identities=16% Similarity=0.238 Sum_probs=167.1
Q ss_pred ccEEEEEEEEecCCEEEEEEecCC----CCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecC--cchHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQ----GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLG--DWTSQL 649 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~----~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G--~wT~~L 649 (889)
+.++|.+++.+.+++.+|+|..|. .+.|+||||+.|.+|.-+...+|||||+|.|+++.++|+||..+ ..|..|
T Consensus 2 ~~~~V~~i~~~t~~~~~l~l~~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~p~~~~l~i~vk~~~~G~~S~~l 81 (352)
T TIGR02160 2 HRLTVAEVERLTADAVAISFEIPDELAEDYRFAPGQHLTLRREVDGEELRRSYSICSAPAPGEIRVAVKKIPGGLFSTWA 81 (352)
T ss_pred eEeEEEEEEecCCCeEEEEEeCCccccccCCCCCCCeEEEEEecCCcEeeeeccccCCCCCCcEEEEEEEeCCCcchHHH
Confidence 567899999999999999999764 26899999999999744445689999999998889999999873 456666
Q ss_pred HHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCC--CCCEEEEEEcCcchhhHHHHHHHHHHHHh
Q 002711 650 KSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYK--DYDVLLLVGLGIGATPLISIIKDVLNNIK 727 (889)
Q Consensus 650 ~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~--~~~~vllVagGiGITP~lsil~~l~~~~~ 727 (889)
.+.+ ++|+ .+.|.||||.+..+.. ..+.+||||||+||||++||+++++.+.
T Consensus 82 ~~~l-------------------~~Gd------~v~v~gP~G~f~~~~~~~~~~~~lliagG~GItP~~s~l~~~~~~~- 135 (352)
T TIGR02160 82 NDEI-------------------RPGD------TLEVMAPQGLFTPDLSTPHAGHYVAVAAGSGITPMLSIAETVLAAE- 135 (352)
T ss_pred HhcC-------------------CCCC------EEEEeCCceeeecCCCccccccEEEEeccccHhHHHHHHHHHHhcC-
Confidence 4322 4677 8999999999753322 2468999999999999999999987541
Q ss_pred hhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHH
Q 002711 728 QQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALI 807 (889)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~ 807 (889)
..++++|+|++|+.+++ +|.++|.++++... ..+.++..+++..+..
T Consensus 136 ------------------------~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~~-~~~~~~~~~s~~~~~~------- 182 (352)
T TIGR02160 136 ------------------------PRSTFTLVYGNRRTASV-MFAEELADLKDKHP-QRFHLAHVLSREPREA------- 182 (352)
T ss_pred ------------------------CCceEEEEEEeCCHHHH-HHHHHHHHHHHhCc-CcEEEEEEecCCCcCc-------
Confidence 14679999999999986 78888888875432 3577776665421100
Q ss_pred HHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhC-CCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEe
Q 002711 808 TMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKH-TDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHK 886 (889)
Q Consensus 808 ~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~-~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~ 886 (889)
....||.+...+-+.+.... ......||+|||++|++.+++.+.+... ..-.+|.
T Consensus 183 ---------------------~~~~gr~~~~~l~~~l~~~~~~~~~~~vyiCGp~~m~~~v~~~L~~~Gv---~~~~i~~ 238 (352)
T TIGR02160 183 ---------------------PLLSGRLDGERLAALLDSLIDVDRADEWFLCGPQAMVDDAEQALTGLGV---PAGRVHL 238 (352)
T ss_pred ---------------------ccccCccCHHHHHHHHHhccCcccCCEEEEECCHHHHHHHHHHHHHcCC---CHHHEEE
Confidence 01236766433222221111 1223479999999999999999987643 3345666
Q ss_pred eCC
Q 002711 887 ENF 889 (889)
Q Consensus 887 E~F 889 (889)
|.|
T Consensus 239 E~F 241 (352)
T TIGR02160 239 ELF 241 (352)
T ss_pred Eec
Confidence 766
|
Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. |
| >cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=227.16 Aligned_cols=209 Identities=19% Similarity=0.321 Sum_probs=157.3
Q ss_pred EEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHHHhhccCC
Q 002711 583 VAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSIFAKVCQP 659 (889)
Q Consensus 583 v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~~~~~~~~ 659 (889)
++.+.+++..+++..|..+.|+||||+.|.+|......+|||||+|+|.+ +.++|+||.. |.+|+.|.+..
T Consensus 3 ~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~~~l~vk~~~~G~~s~~l~~~~------ 76 (223)
T cd00322 3 TEDVTDDVRLFRLQLPNGFSFKPGQYVDLHLPGDGRGLRRAYSIASSPDEEGELELTVKIVPGGPFSAWLHDLK------ 76 (223)
T ss_pred eEEecCCeEEEEEecCCCCCcCCCcEEEEEecCCCCcceeeeeccCCCCCCCeEEEEEEEeCCCchhhHHhcCC------
Confidence 45667899999999887788999999999999755678999999999976 8999999999 99999887532
Q ss_pred CCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccC
Q 002711 660 PSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITED 739 (889)
Q Consensus 660 ~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~ 739 (889)
+|+ ++.|.||||.+......++.+++||||+||||++|+++++....
T Consensus 77 --------------~G~------~v~i~gP~G~~~~~~~~~~~~v~ia~G~Giap~~~~l~~~~~~~------------- 123 (223)
T cd00322 77 --------------PGD------EVEVSGPGGDFFLPLEESGPVVLIAGGIGITPFRSMLRHLAADK------------- 123 (223)
T ss_pred --------------CCC------EEEEECCCcccccCcccCCcEEEEecCCchhHHHHHHHHHHhhC-------------
Confidence 566 89999999998544456789999999999999999999987541
Q ss_pred CCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCC
Q 002711 740 GGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNG 819 (889)
Q Consensus 740 ~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~ 819 (889)
..++++++|++|+.+++ +|.+++.++++.. .+++++.++++......
T Consensus 124 ------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~~~~~~~~~------------------ 170 (223)
T cd00322 124 ------------PGGEITLLYGARTPADL-LFLDELEELAKEG--PNFRLVLALSRESEAKL------------------ 170 (223)
T ss_pred ------------CCCcEEEEEecCCHHHh-hHHHHHHHHHHhC--CCeEEEEEecCCCCCCC------------------
Confidence 14679999999999875 7888888887633 46777776654311100
Q ss_pred CccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhh
Q 002711 820 LDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 820 ~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 875 (889)
+ ..++......+..... ......||+|||++|++.+++.+.+.+
T Consensus 171 -----~-----~~~~~~~~~~~~~~~~--~~~~~~~yvCGp~~m~~~~~~~L~~~g 214 (223)
T cd00322 171 -----G-----PGGRIDREAEILALLP--DDSGALVYICGPPAMAKAVREALVSLG 214 (223)
T ss_pred -----c-----ccceeeHHHHHHhhcc--cccCCEEEEECCHHHHHHHHHHHHHcC
Confidence 0 0011111111111111 123457999999999999999988754
|
FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in many organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in |
| >cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=236.77 Aligned_cols=230 Identities=17% Similarity=0.336 Sum_probs=164.8
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCC--CccCCccEEEEEEcCC-----------------------------CCCcccce
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG--FKYTSGQYIFVNCAAV-----------------------------SQFQWHPF 624 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~--~~~~pGQyv~l~~p~i-----------------------------s~~e~HPF 624 (889)
..++|.+++.+.+++.++++..|.+ +.|+||||+.|.+|.. ....+|||
T Consensus 10 ~~~~v~~~~~~~~d~~~l~l~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~y 89 (283)
T cd06188 10 WECTVISNDNVATFIKELVLKLPSGEEIAFKAGGYIQIEIPAYEIAYADFDVAEKYRADWDKFGLWQLVFKHDEPVSRAY 89 (283)
T ss_pred EEEEEEEcccccchhhheEEecCCCceeeecCCceEEEEcCCccccccccccchhhhhHHhhhcccccccccCCcccccc
Confidence 4567888888999999999998775 7899999999999853 11235999
Q ss_pred eeeecCC-CCceEEEEEe-----------cCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCC
Q 002711 625 SITSAPG-DDYLSIHIRT-----------LGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA 692 (889)
Q Consensus 625 TIaSaP~-~~~l~l~Ir~-----------~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~ 692 (889)
||+|+|. ++.+.|+||. .|..|+.|.+ +++|+ +|.|.||||.
T Consensus 90 Sias~p~~~~~l~l~vk~~~~~~~~~~~~~G~~S~~L~~--------------------l~~Gd------~v~i~gP~G~ 143 (283)
T cd06188 90 SLANYPAEEGELKLNVRIATPPPGNSDIPPGIGSSYIFN--------------------LKPGD------KVTASGPFGE 143 (283)
T ss_pred CcCCCCCCCCeEEEEEEEeccCCccCCCCCceehhHHhc--------------------CCCCC------EEEEECcccc
Confidence 9999996 5789999997 3445655543 34677 8999999999
Q ss_pred CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHH
Q 002711 693 PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFR 772 (889)
Q Consensus 693 ~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~ 772 (889)
+..+ ...+.+||||||+||||++||+++++.... ..++++|+|++|+.+++ +|.
T Consensus 144 f~l~-~~~~~~vlIAgGtGItP~~s~l~~~~~~~~------------------------~~~~v~l~~g~r~~~d~-~~~ 197 (283)
T cd06188 144 FFIK-DTDREMVFIGGGAGMAPLRSHIFHLLKTLK------------------------SKRKISFWYGARSLKEL-FYQ 197 (283)
T ss_pred cccc-CCCCcEEEEEecccHhHHHHHHHHHHhcCC------------------------CCceEEEEEecCCHHHh-hHH
Confidence 8754 345689999999999999999999865311 13689999999999886 688
Q ss_pred HHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhC-CCC
Q 002711 773 GVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKH-TDE 851 (889)
Q Consensus 773 ~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~-~~~ 851 (889)
++|.+++... .++.++..+|+... .+. ..| ..||.+ +.+.+...... ...
T Consensus 198 ~el~~l~~~~--~~~~~~~~~s~~~~-~~~--------------------~~~-----~~G~v~-~~~~~~~~~~~~~~~ 248 (283)
T cd06188 198 EEFEALEKEF--PNFKYHPVLSEPQP-EDN--------------------WDG-----YTGFIH-QVLLENYLKKHPAPE 248 (283)
T ss_pred HHHHHHHHHC--CCeEEEEEECCCCc-cCC--------------------CCC-----cceeec-HHHHHHHhccCCCCC
Confidence 8888887643 35666665554210 000 001 113332 22333322222 123
Q ss_pred eEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 852 RVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 852 ~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
+..||+|||++|++.+++.+++.+. ..-.+|.|.|
T Consensus 249 ~~~vyiCGP~~m~~~~~~~l~~~Gv---~~~~i~~e~F 283 (283)
T cd06188 249 DIEFYLCGPPPMNSAVIKMLDDLGV---PRENIAFDDF 283 (283)
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCC---CHHHeeccCC
Confidence 4679999999999999999987643 3556788887
|
(Na+-NQR) provides a means of storing redox reaction energy via the transmembrane translocation of Na2+ ions. The C-terminal domain resembles ferredoxin:NADP+ oxidoreductase, and has NADH and FAD binding sites. (Na+-NQR) is distinct from H+-translocating NADH:quinone oxidoreductases and noncoupled NADH:quinone oxidoreductases. The NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain of this group typically contains an iron-sulfur cluster binding domain. |
| >PRK10684 HCP oxidoreductase, NADH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=238.02 Aligned_cols=225 Identities=18% Similarity=0.275 Sum_probs=165.1
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSI 652 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~ 652 (889)
+.++|.++..+.+++..+++..+..+.|+||||+.|.+|.. ...+|||||+|+|.+ +.+.|+||.. |..|+.|.+.
T Consensus 10 ~~~~V~~i~~~t~~v~~l~l~~~~~~~f~pGQfv~l~~~~~-~~~~R~ySias~p~~~~~l~i~Vk~~~~G~~S~~L~~~ 88 (332)
T PRK10684 10 NRMQVHSIVQETPDVWTISLICHDFYPYRAGQYALVSIRNS-AETLRAYTLSSTPGVSEFITLTVRRIDDGVGSQWLTRD 88 (332)
T ss_pred eeEEEEEEEccCCCeEEEEEcCCCCCCcCCCCEEEEEecCC-CEeeeeecccCCCCCCCcEEEEEEEcCCCcchhHHHhc
Confidence 35788889999999999999877778999999999999853 235799999999975 6799999987 5667776543
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhc
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEI 732 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~ 732 (889)
+ ++|+ +|.|.||+|.+..+....+.+|||||||||||++||+++++.+.
T Consensus 89 l-------------------~~Gd------~v~v~gP~G~f~l~~~~~~~~vliAgG~GItP~~sml~~~~~~~------ 137 (332)
T PRK10684 89 V-------------------KRGD------YLWLSDAMGEFTCDDKAEDKYLLLAAGCGVTPIMSMRRWLLKNR------ 137 (332)
T ss_pred C-------------------CCCC------EEEEeCCccccccCCCCCCcEEEEecCcCcchHHHHHHHHHhcC------
Confidence 3 3677 89999999998644334568999999999999999999986531
Q ss_pred ccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHh
Q 002711 733 EEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQS 812 (889)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~ 812 (889)
..++++|+|++|+.+++ .|.++|.++++... .+.++.+.++.. .
T Consensus 138 -------------------~~~~v~l~y~~r~~~~~-~~~~el~~l~~~~~--~~~~~~~~~~~~---~----------- 181 (332)
T PRK10684 138 -------------------PQADVQVIFNVRTPQDV-IFADEWRQLKQRYP--QLNLTLVAENNA---T----------- 181 (332)
T ss_pred -------------------CCCCEEEEEeCCChHHh-hhHHHHHHHHHHCC--CeEEEEEeccCC---C-----------
Confidence 14689999999999987 58888888876543 455555433210 0
Q ss_pred hhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 813 IHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 813 l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.| ...||.+.. ++.+..... ....||+|||++|++.+++.+.+.+. ..-.+|.|.|
T Consensus 182 -----------~~----~~~grl~~~-~l~~~~~~~--~~~~vyiCGP~~m~~~v~~~l~~~Gv---~~~~i~~E~F 237 (332)
T PRK10684 182 -----------EG----FIAGRLTRE-LLQQAVPDL--ASRTVMTCGPAPYMDWVEQEVKALGV---TADRFFKEKF 237 (332)
T ss_pred -----------CC----ccccccCHH-HHHHhcccc--cCCEEEEECCHHHHHHHHHHHHHcCC---CHHHeEeecc
Confidence 00 123676643 333322111 12469999999999999998877532 3445777877
|
|
| >cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=224.58 Aligned_cols=205 Identities=21% Similarity=0.371 Sum_probs=154.1
Q ss_pred cEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCC-CCcccceeeeecCCCCceEEEEEec---CcchHHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVS-QFQWHPFSITSAPGDDYLSIHIRTL---GDWTSQLKSI 652 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is-~~e~HPFTIaSaP~~~~l~l~Ir~~---G~wT~~L~~~ 652 (889)
.++|++++.+++++.++++..|..+.|+||||+.|.++..+ ..++|||||+|.|.++.+.|+||.. |+.|+.|.++
T Consensus 2 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~~r~ySi~s~~~~~~l~~~vk~~~~~g~~s~~l~~l 81 (218)
T cd06196 2 TVTLLSIEPVTHDVKRLRFDKPEGYDFTPGQATEVAIDKPGWRDEKRPFTFTSLPEDDVLEFVIKSYPDHDGVTEQLGRL 81 (218)
T ss_pred ceEEEEEEEcCCCeEEEEEcCCCcCCCCCCCEEEEEeeCCCCCccccccccccCCCCCeEEEEEEEcCCCCcHhHHHHhC
Confidence 46788999999999999999988899999999999997643 3478999999999889999999986 6678877532
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhc
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEI 732 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~ 732 (889)
++|+ .+.|.||||.+.. .+.+||||||+||||++|++++++...
T Consensus 82 --------------------~~G~------~v~i~gP~G~~~~----~~~~vlia~GtGiaP~~s~l~~~~~~~------ 125 (218)
T cd06196 82 --------------------QPGD------TLLIEDPWGAIEY----KGPGVFIAGGAGITPFIAILRDLAAKG------ 125 (218)
T ss_pred --------------------CCCC------EEEEECCccceEe----cCceEEEecCCCcChHHHHHHHHHhCC------
Confidence 2677 8999999999642 257899999999999999999987531
Q ss_pred ccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHh
Q 002711 733 EEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQS 812 (889)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~ 812 (889)
..++++++|++|+.+++ ++.++++++.. +.++.++|.....
T Consensus 126 -------------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~------~~~~~~~s~~~~~------------- 166 (218)
T cd06196 126 -------------------KLEGNTLIFANKTEKDI-ILKDELEKMLG------LKFINVVTDEKDP------------- 166 (218)
T ss_pred -------------------CCceEEEEEecCCHHHH-hhHHHHHHhhc------ceEEEEEcCCCCC-------------
Confidence 14678999999999886 67787777632 3444444431100
Q ss_pred hhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 813 IHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 813 l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
....||.+- +++++.... ....||+|||++|++++++.+.+...
T Consensus 167 ----------------~~~~g~~~~-~~l~~~~~~---~~~~vyiCGp~~m~~~~~~~l~~~G~ 210 (218)
T cd06196 167 ----------------GYAHGRIDK-AFLKQHVTD---FNQHFYVCGPPPMEEAINGALKELGV 210 (218)
T ss_pred ----------------CeeeeEECH-HHHHHhcCC---CCCEEEEECCHHHHHHHHHHHHHcCC
Confidence 011255542 344443221 12469999999999999999987643
|
The N-terminal region may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH. |
| >PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=238.38 Aligned_cols=227 Identities=21% Similarity=0.340 Sum_probs=164.8
Q ss_pred ccccEEEEEEEEecCCEEEEEEecC--CCCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHH
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKP--QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQ 648 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~l~~~~p--~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~ 648 (889)
....++|++++.+++++..|++..| ..+.|+||||+.|.+|.. ++|||||+|.|++ +.++|+||.. |.+|+.
T Consensus 101 ~~~~~~V~~~~~~~~d~~~l~l~~~~~~~~~~~pGQfv~l~~~~~---~~R~ySias~p~~~~~l~~~ik~~~~G~~s~~ 177 (339)
T PRK07609 101 KKLPCRVASLERVAGDVMRLKLRLPATERLQYLAGQYIEFILKDG---KRRSYSIANAPHSGGPLELHIRHMPGGVFTDH 177 (339)
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEcCCCCCCccCCCCeEEEECCCC---ceeeeecCCCCCCCCEEEEEEEecCCCccHHH
Confidence 3356889999999999999999876 357899999999999863 6899999999975 7999999976 667877
Q ss_pred HHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhh
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQ 728 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~ 728 (889)
|.+.+ ++|+ .+.|.||||.+..+....+.+||||||+||||++|++++++...
T Consensus 178 l~~~l-------------------~~G~------~v~v~gP~G~~~~~~~~~~~ivlIagGtGiaP~~s~l~~~~~~~-- 230 (339)
T PRK07609 178 VFGAL-------------------KERD------ILRIEGPLGTFFLREDSDKPIVLLASGTGFAPIKSIVEHLRAKG-- 230 (339)
T ss_pred HHHhc-------------------cCCC------EEEEEcCceeEEecCCCCCCEEEEecCcChhHHHHHHHHHHhcC--
Confidence 76543 2576 89999999998754345678999999999999999999987531
Q ss_pred hhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHH
Q 002711 729 QKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALIT 808 (889)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~ 808 (889)
..++++|+|++|+.+++ .+.+++.++++.. ..+.++..+++... .+
T Consensus 231 -----------------------~~~~i~l~~g~r~~~dl-~~~e~l~~~~~~~--~~~~~~~~~s~~~~-~~------- 276 (339)
T PRK07609 231 -----------------------IQRPVTLYWGARRPEDL-YLSALAEQWAEEL--PNFRYVPVVSDALD-DD------- 276 (339)
T ss_pred -----------------------CCCcEEEEEecCChHHh-ccHHHHHHHHHhC--CCeEEEEEecCCCC-CC-------
Confidence 14679999999999986 5677777776543 35777766664311 00
Q ss_pred HHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeC
Q 002711 809 MLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKEN 888 (889)
Q Consensus 809 ~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~ 888 (889)
...| +.|+.+ +.+++.+. ......||+|||++|++.+++.+.+.+. ..-.+|.|.
T Consensus 277 -------------~~~g-----~~G~v~-~~~~~~~~---~~~~~~vy~CGp~~m~~~~~~~l~~~G~---~~~~i~~e~ 331 (339)
T PRK07609 277 -------------AWTG-----RTGFVH-QAVLEDFP---DLSGHQVYACGSPVMVYAARDDFVAAGL---PAEEFFADA 331 (339)
T ss_pred -------------CccC-----ccCcHH-HHHHhhcc---cccCCEEEEECCHHHHHHHHHHHHHcCC---CHHHeEEee
Confidence 0011 113321 11222211 1123579999999999999998887542 344567777
Q ss_pred C
Q 002711 889 F 889 (889)
Q Consensus 889 F 889 (889)
|
T Consensus 332 F 332 (339)
T PRK07609 332 F 332 (339)
T ss_pred c
Confidence 6
|
|
| >PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=240.22 Aligned_cols=233 Identities=18% Similarity=0.293 Sum_probs=170.9
Q ss_pred ccccEEEEEEEEecCCEEEEEEecCC---CCccCCccEEEEEEcCCC--CCcccceeeeecCCCCceEEEEEec--Ccch
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQ---GFKYTSGQYIFVNCAAVS--QFQWHPFSITSAPGDDYLSIHIRTL--GDWT 646 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~l~~~~p~---~~~~~pGQyv~l~~p~is--~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT 646 (889)
.+..++|++++.+.+++..+++..+. .+.|+||||+.|.++..+ ..+||||||+|+|+++.+.|+||.. |..|
T Consensus 153 ~~~~~~V~~~~~~t~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~ySias~p~~~~l~~~Vk~~~~G~~S 232 (399)
T PRK13289 153 GWRDFRVVKKVPESEVITSFYLEPVDGGPVADFKPGQYLGVRLDPEGEEYQEIRQYSLSDAPNGKYYRISVKREAGGKVS 232 (399)
T ss_pred CcEEEEEEEEEECCCCEEEEEEEcCCCCcCCCCCCCCeEEEEEecCCccccceeEEEeeeCCCCCeEEEEEEECCCCeeh
Confidence 45667899999999999999998764 268999999999996432 3467999999999888999999988 8888
Q ss_pred HHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHH
Q 002711 647 SQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNI 726 (889)
Q Consensus 647 ~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~ 726 (889)
..|.+.+ ++|+ .|.|.||||.+..+-...+.+|||||||||||++|++++++...
T Consensus 233 ~~L~~~l-------------------~~Gd------~v~v~gP~G~f~l~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~ 287 (399)
T PRK13289 233 NYLHDHV-------------------NVGD------VLELAAPAGDFFLDVASDTPVVLISGGVGITPMLSMLETLAAQQ 287 (399)
T ss_pred HHHhhcC-------------------CCCC------EEEEEcCccccccCCCCCCcEEEEecCccHHHHHHHHHHHHhcC
Confidence 8886533 3677 89999999998654334578999999999999999999987541
Q ss_pred hhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHH
Q 002711 727 KQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSAL 806 (889)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~ 806 (889)
..++++|+|++|+.+++ .|.++|.++++.. ..++++.++++.... +
T Consensus 288 -------------------------~~~~v~l~~~~r~~~~~-~~~~eL~~l~~~~--~~~~~~~~~s~~~~~-~----- 333 (399)
T PRK13289 288 -------------------------PKRPVHFIHAARNGGVH-AFRDEVEALAARH--PNLKAHTWYREPTEQ-D----- 333 (399)
T ss_pred -------------------------CCCCEEEEEEeCChhhc-hHHHHHHHHHHhC--CCcEEEEEECCCccc-c-----
Confidence 24689999999999986 6889898887643 357777666542110 0
Q ss_pred HHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEe
Q 002711 807 ITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHK 886 (889)
Q Consensus 807 ~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~ 886 (889)
..+. ...+.||.+.. ++.+... .....||+|||++|++.+++.+.+.+. ..=.+|.
T Consensus 334 ----------------~~~~-~~~~~g~i~~~-~l~~~~~---~~~~~vyiCGp~~m~~~v~~~L~~~Gv---~~~~I~~ 389 (399)
T PRK13289 334 ----------------RAGE-DFDSEGLMDLE-WLEAWLP---DPDADFYFCGPVPFMQFVAKQLLELGV---PEERIHY 389 (399)
T ss_pred ----------------ccCC-cccccCcccHH-HHHhhCC---CCCCEEEEECCHHHHHHHHHHHHHcCC---CHHHeee
Confidence 0000 00123666633 3333221 124579999999999999999987643 2335677
Q ss_pred eCC
Q 002711 887 ENF 889 (889)
Q Consensus 887 E~F 889 (889)
|.|
T Consensus 390 E~F 392 (399)
T PRK13289 390 EFF 392 (399)
T ss_pred ecc
Confidence 776
|
|
| >PRK11872 antC anthranilate dioxygenase reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=235.46 Aligned_cols=224 Identities=17% Similarity=0.305 Sum_probs=163.4
Q ss_pred cccEEEEEEEEecCCEEEEEEecC---CCCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEec--CcchHH
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKP---QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDWTSQ 648 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~l~~~~p---~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~--G~wT~~ 648 (889)
...++|++++.+.+++..|++..+ +.+.|+||||+.|.+|.. -.+|||||+|.|. ++.+.|+||.. |..|+.
T Consensus 106 ~~~~~V~~i~~~s~di~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySias~p~~~~~l~~~ik~~~~G~~s~~ 183 (340)
T PRK11872 106 KISGVVTAVELVSETTAILHLDASAHGRQLDFLPGQYARLQIPGT--DDWRSYSFANRPNATNQLQFLIRLLPDGVMSNY 183 (340)
T ss_pred eeeEEEEEEEecCCCeEEEEEEcCCCCCccCcCCCCEEEEEeCCC--CceeecccCCCCCCCCeEEEEEEECCCCcchhh
Confidence 345789999999999999999876 468899999999999864 3589999999996 57899999986 446777
Q ss_pred HHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhh
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQ 728 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~ 728 (889)
|.+.+ ++|+ .|.|.||||.+..+ ...+.+||||||+||||++|++++++...
T Consensus 184 L~~~l-------------------~~G~------~v~i~gP~G~f~l~-~~~~~~vliagGtGiaP~~s~l~~~~~~~-- 235 (340)
T PRK11872 184 LRERC-------------------QVGD------EILFEAPLGAFYLR-EVERPLVFVAGGTGLSAFLGMLDELAEQG-- 235 (340)
T ss_pred HhhCC-------------------CCCC------EEEEEcCcceeEeC-CCCCcEEEEeCCcCccHHHHHHHHHHHcC--
Confidence 75432 3677 89999999998643 23468999999999999999999986531
Q ss_pred hhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHH
Q 002711 729 QKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALIT 808 (889)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~ 808 (889)
..++++|+|++|+.+++ .|.++|.++++.. .+++++..+++..+.
T Consensus 236 -----------------------~~~~v~l~~g~r~~~dl-~~~~el~~~~~~~--~~~~~~~~~s~~~~~--------- 280 (340)
T PRK11872 236 -----------------------CSPPVHLYYGVRHAADL-CELQRLAAYAERL--PNFRYHPVVSKASAD--------- 280 (340)
T ss_pred -----------------------CCCcEEEEEecCChHHh-ccHHHHHHHHHHC--CCcEEEEEEeCCCCc---------
Confidence 13579999999999987 5788888876644 357777666542110
Q ss_pred HHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeC
Q 002711 809 MLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKEN 888 (889)
Q Consensus 809 ~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~ 888 (889)
..| ..|+.. +.+.+... ......||+||||+|++.+++.+.+.. -..-.+|.|.
T Consensus 281 --------------~~g-----~~g~v~--~~l~~~~l--~~~~~~vy~CGp~~mv~~~~~~L~~~G---v~~~~i~~E~ 334 (340)
T PRK11872 281 --------------WQG-----KRGYIH--EHFDKAQL--RDQAFDMYLCGPPPMVEAVKQWLDEQA---LENYRLYYEK 334 (340)
T ss_pred --------------CCC-----ceeecc--HHHHHhhc--CcCCCEEEEeCCHHHHHHHHHHHHHcC---CCHHHEEEee
Confidence 011 112322 22221100 112246999999999999999998754 3345677777
Q ss_pred C
Q 002711 889 F 889 (889)
Q Consensus 889 F 889 (889)
|
T Consensus 335 F 335 (340)
T PRK11872 335 F 335 (340)
T ss_pred e
Confidence 6
|
|
| >PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=213.85 Aligned_cols=153 Identities=29% Similarity=0.562 Sum_probs=97.8
Q ss_pred CCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHH
Q 002711 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVA 779 (889)
Q Consensus 700 ~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~ 779 (889)
|++|||||||+||||++|+++++++..++.. ...++|+|+|++|+.++++||.++|+++.
T Consensus 1 y~~vvlvAGG~GIt~~l~~l~~l~~~~~~~~--------------------~~~~~i~lvW~vR~~~~l~w~~~~l~~l~ 60 (156)
T PF08030_consen 1 YDNVVLVAGGSGITPILPILRDLLQRQNRGS--------------------SRTRRIKLVWVVRDADELEWFSPELNELL 60 (156)
T ss_dssp SSEEEEEEEGGGHHHHHHHHHHHHHHHHTT-------------------------EEEEEEEES-TTTTHHHHHHHHHHH
T ss_pred CCEEEEEecCcCHHHHHHHHHHHHHhhcccc--------------------ccccceEEEEeeCchhhhhhhhHHHHHHH
Confidence 7899999999999999999999998866321 24789999999999999999999999887
Q ss_pred hhcCCCcEEEEEeeeccccCCChhhHHHHHHHh--hhcccCCCccccCCc-cccccCCCCHHHHHHHHHhhCCCCeEEEE
Q 002711 780 EYDQDGVIELHNYCTSVYEEGDARSALITMLQS--IHHAKNGLDIVSGTR-VKTHFARPNWRTVFKHVAVKHTDERVGVF 856 (889)
Q Consensus 780 ~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~--l~~~~~~~d~~sg~~-~~~~~GRPd~~~v~~~~~~~~~~~~v~V~ 856 (889)
+......+++++|+|+.....+.......+... ......++|..+..+ +.+++||||+++++++.+.....++++|+
T Consensus 61 ~~~~~~~~~~~iyvT~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~~~~~~~~~gRP~~~~~~~~~~~~~~~~~~~V~ 140 (156)
T PF08030_consen 61 ELDRLGNVEVHIYVTRESSAPSNSDSSDSSSDGENSSSESSNVDSVSPTSNISVHYGRPDLDEILSEVASQQSSGRVAVF 140 (156)
T ss_dssp HHHHHTSEEEEEEETT-------------------------------------EEES---HHHHHHHHHHHSTT-EEEEE
T ss_pred HHhccccceEEEEEcCCcccccchhhhhcccccccccccccCCcccCCCcccceecCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 766546899999999977655433322222111 111123456666665 78999999999999999777777899999
Q ss_pred EeCChhHHHHHHHHHH
Q 002711 857 YCGAPGLTGELRRLSQ 872 (889)
Q Consensus 857 ~CGP~~m~~~vr~~~~ 872 (889)
+|||++|++++|++|+
T Consensus 141 ~CGP~~m~~~vr~~v~ 156 (156)
T PF08030_consen 141 VCGPPSMVDDVRNAVN 156 (156)
T ss_dssp EES-HHHHHHHHHHH-
T ss_pred EcCcHHHHHHHHHHhC
Confidence 9999999999999884
|
; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A. |
| >cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=224.23 Aligned_cols=207 Identities=20% Similarity=0.331 Sum_probs=150.3
Q ss_pred EEEEEecCCEEEEEEecCC----CCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHHHHHhh
Q 002711 581 LKVAVYPGNVLALQMSKPQ----GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLKSIFAK 655 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~----~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~~~~~~ 655 (889)
.+++.+++++..+++..+. .++|+||||+.|.+|... .|||||+|+|. ++.++|+||..|.+|+.|.+ .
T Consensus 2 ~~i~~~t~~v~~~~l~~~~~~~~~~~~~pGQ~i~l~~~~~~---~~pySi~s~~~~~~~l~~~Ik~~G~~S~~L~~-l-- 75 (253)
T cd06221 2 VEVVDETEDIKTFTLRLEDDDEELFTFKPGQFVMLSLPGVG---EAPISISSDPTRRGPLELTIRRVGRVTEALHE-L-- 75 (253)
T ss_pred ceEEeccCCceEEEEEeCCCccccCCcCCCCEEEEEcCCCC---ccceEecCCCCCCCeEEEEEEeCChhhHHHHc-C--
Confidence 4567788877777666543 388999999999998653 39999999997 67899999999999988753 2
Q ss_pred ccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC-CCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 656 VCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA-QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 656 ~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~-~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ ++.|.||||... .+...++.+|+||||+||||++|++++++....
T Consensus 76 -----------------~~G~------~v~i~gP~G~~f~~~~~~~~~iv~IA~G~GitP~ls~l~~~~~~~~------- 125 (253)
T cd06221 76 -----------------KPGD------TVGLRGPFGNGFPVEEMKGKDLLLVAGGLGLAPLRSLINYILDNRE------- 125 (253)
T ss_pred -----------------CCCC------EEEEECCcCCCcccccccCCeEEEEccccchhHHHHHHHHHHhccc-------
Confidence 2566 899999999953 222256799999999999999999999876411
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..++++|+|++|+.+++ ++.++|.++++. .++.++.++++..+..
T Consensus 126 -----------------~~~~i~Li~~~r~~~~~-~~~~~L~~l~~~---~~~~~~~~~s~~~~~~-------------- 170 (253)
T cd06221 126 -----------------DYGKVTLLYGARTPEDL-LFKEELKEWAKR---SDVEVILTVDRAEEGW-------------- 170 (253)
T ss_pred -----------------cCCcEEEEEecCChHHc-chHHHHHHHHhc---CCeEEEEEeCCCCCCc--------------
Confidence 14689999999999987 678888887754 3566666555321100
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
.+ +.|+.+ +.+.+.... + ....||+|||++|++.+++.+.+.+.
T Consensus 171 ---------~~-----~~g~v~--~~l~~~~~~-~-~~~~vyicGp~~mv~~~~~~L~~~Gv 214 (253)
T cd06221 171 ---------TG-----NVGLVT--DLLPELTLD-P-DNTVAIVCGPPIMMRFVAKELLKLGV 214 (253)
T ss_pred ---------cC-----Cccccc--hhHHhcCCC-c-CCcEEEEECCHHHHHHHHHHHHHcCC
Confidence 00 113322 233322211 1 24579999999999999999987653
|
Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. |
| >PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-23 Score=220.51 Aligned_cols=148 Identities=23% Similarity=0.346 Sum_probs=123.8
Q ss_pred cccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHh
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFA 654 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~ 654 (889)
++.++|++++.+++++.++++..|..+.|+||||+.|.+|....+.+|||||+|.| ++.+.|+||..|.+|+.|.++
T Consensus 4 ~~~~~V~~~~~~t~d~~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~-~~~l~l~Vk~~G~~t~~l~~l-- 80 (250)
T PRK00054 4 PENMKIVENKEIAPNIYTLVLDGEKVFDMKPGQFVMVWVPGVEPLLERPISISDID-KNEITILYRKVGEGTKKLSKL-- 80 (250)
T ss_pred ceEEEEEEEEEecCCeEEEEEeCccccCCCCCcEEEEEeCCCCCcCceeeEEeeeC-CCEEEEEEEEcChHHHHHhcC--
Confidence 45678999999999999999998777899999999999997766789999999999 889999999999999877532
Q ss_pred hccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 655 KVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 655 ~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ +|.|.||||.+...-...+.+++||||+||||++|+++++...
T Consensus 81 ------------------~~G~------~v~i~gP~G~~f~l~~~~~~~vlIagG~GiaP~~s~l~~~~~~--------- 127 (250)
T PRK00054 81 ------------------KEGD------ELDIRGPLGNGFDLEEIGGKVLLVGGGIGVAPLYELAKELKKK--------- 127 (250)
T ss_pred ------------------CCCC------EEEEEcccCCCCCCCCCCCeEEEEeccccHHHHHHHHHHHHHc---------
Confidence 2576 8999999998432212567899999999999999999998632
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHH
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNE 777 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~e 777 (889)
..+++++|.+|+.+++ ++.++|.+
T Consensus 128 ------------------~~~v~l~~~~r~~~d~-~~~~el~~ 151 (250)
T PRK00054 128 ------------------GVEVTTVLGARTKDEV-IFEEEFAK 151 (250)
T ss_pred ------------------CCcEEEEEEcCCHHHh-hhHHHHHh
Confidence 2468999999999986 56666665
|
|
| >cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=219.78 Aligned_cols=217 Identities=17% Similarity=0.290 Sum_probs=160.1
Q ss_pred EEEEEEEecCCEEEEEEecCC---CCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHHH
Q 002711 579 RILKVAVYPGNVLALQMSKPQ---GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKSI 652 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~---~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~~ 652 (889)
+|.+++.+++++..+++..|. .+.++||||+.|.+|..+....|||||+|.|.+ +.+.|+||.. |..|+.|.+.
T Consensus 2 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~R~ysi~s~~~~~~~~~~~v~~~~~G~~s~~l~~~ 81 (234)
T cd06183 2 KLVSKEDISHDTRIFRFELPSPDQVLGLPVGQHVELKAPDDGEQVVRPYTPISPDDDKGYFDLLIKIYPGGKMSQYLHSL 81 (234)
T ss_pred EeEEeEecCCCEEEEEEECCCCCCcCCCCcccEEEEEecCCCcccccccccccCCCcCCEEEEEEEECCCCcchhHHhcC
Confidence 567888899999999998875 378999999999999766668999999999864 5799999986 7778777531
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCC-CEEEEEEcCcchhhHHHHHHHHHHHHhhhhh
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDY-DVLLLVGLGIGATPLISIIKDVLNNIKQQKE 731 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~-~~vllVagGiGITP~lsil~~l~~~~~~~~~ 731 (889)
++|+ ++.|.||||.+..+.... +.+||||||+||||+++++++++.+..
T Consensus 82 --------------------~~G~------~v~i~gP~G~~~~~~~~~~~~~vliagGtGiaP~~~~l~~~~~~~~---- 131 (234)
T cd06183 82 --------------------KPGD------TVEIRGPFGKFEYKPNGKVKHIGMIAGGTGITPMLQLIRAILKDPE---- 131 (234)
T ss_pred --------------------CCCC------EEEEECCccceeecCCCCccEEEEEcCCcchhHHHHHHHHHHhCcC----
Confidence 2566 899999999975433333 789999999999999999999865310
Q ss_pred cccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHH
Q 002711 732 IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQ 811 (889)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~ 811 (889)
..++|+++|++|+.+++ ++.++|+++.+.. ...++++.++|+..+..
T Consensus 132 --------------------~~~~i~l~~~~r~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~----------- 178 (234)
T cd06183 132 --------------------DKTKISLLYANRTEEDI-LLREELDELAKKH-PDRFKVHYVLSRPPEGW----------- 178 (234)
T ss_pred --------------------cCcEEEEEEecCCHHHh-hhHHHHHHHHHhC-cccEEEEEEEcCCCcCC-----------
Confidence 24789999999999886 7888888876642 24677777666421100
Q ss_pred hhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHH-HHHHHHHhhhc
Q 002711 812 SIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTG-ELRRLSQDFSR 876 (889)
Q Consensus 812 ~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~-~vr~~~~~~~~ 876 (889)
..+.||.+. .+++......+.....||+|||++|++ ++++.+.+.+.
T Consensus 179 -----------------~~~~g~~~~-~~l~~~~~~~~~~~~~~~icGp~~~~~~~~~~~l~~~G~ 226 (234)
T cd06183 179 -----------------KGGVGFITK-EMIKEHLPPPPSEDTLVLVCGPPPMIEGAVKGLLKELGY 226 (234)
T ss_pred -----------------ccccceECH-HHHHHhCCCCCCCCeEEEEECCHHHHHHHHHHHHHHcCC
Confidence 112255542 223332211012346899999999999 99999987543
|
Like ferredoxin reductases, these proteins have an N-terminal FAD binding subdomain and a C-terminal NADH binding subdomain, separated by a cleft, which accepts FAD. The NADH-binding moiety interacts with part of the FAD and resembles a Rossmann fold. However, NAD is bound differently than in canonical Rossmann fold proteins. Nitrate reductases, flavoproteins similar to pyridine nucleotide cytochrome reductases, catalyze the reduction of nitrate to nitrite. The enzyme can be divided into three functional fragments that bind the cofactors molybdopterin, heme-iron, and FAD/NADH. |
| >PRK10926 ferredoxin-NADP reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=220.89 Aligned_cols=215 Identities=16% Similarity=0.274 Sum_probs=154.3
Q ss_pred cccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEec--CcchHHHHHH
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSI 652 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~--G~wT~~L~~~ 652 (889)
|..++|.+++.+.+++.++++..|. ..|+||||+.|.++......+|||||+|+|+++.++++||.. |..|+.|.+
T Consensus 4 ~~~~~V~~i~~~t~~v~~l~l~~~~-~~~~pGQfv~l~~~~~g~~~~R~ySias~p~~~~l~~~ik~~~~G~~S~~L~~- 81 (248)
T PRK10926 4 WVTGKVTKVQNWTDALFSLTVHAPV-DPFTAGQFTKLGLEIDGERVQRAYSYVNAPDNPDLEFYLVTVPEGKLSPRLAA- 81 (248)
T ss_pred cEEEEEEEEEEcCCCeEEEEEeCCC-CCCCCCCEEEEEEecCCcEEEeeecccCCCCCCeEEEEEEEeCCCCcChHHHh-
Confidence 5678899999999999999998763 378999999999964344457999999999888999999986 778887753
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCC-CCCCC-CCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhh
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA-PAQDY-KDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK 730 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~-~~~~~-~~~~~vllVagGiGITP~lsil~~l~~~~~~~~ 730 (889)
+ ++|+ +|.|.||+|. +..+- ...+.++||||||||||++|+++++....
T Consensus 82 l-------------------~~Gd------~v~i~gp~~g~f~l~~~~~~~~~vlIagGtGItP~~s~l~~~~~~~---- 132 (248)
T PRK10926 82 L-------------------KPGD------EVQVVSEAAGFFVLDEVPDCETLWMLATGTAIGPYLSILQEGKDLE---- 132 (248)
T ss_pred C-------------------CCCC------EEEEecCCCcceEccCCCCCCeEEEEEeeeeHHHHHHHHHhhHhhC----
Confidence 2 3677 8999998844 33221 13368999999999999999999875321
Q ss_pred hcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHH
Q 002711 731 EIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITML 810 (889)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~ 810 (889)
..++++|+|++|+.+++ .|.++|+++++... ..+.++..+++....+
T Consensus 133 ---------------------~~~~v~l~~g~r~~~d~-~~~~el~~l~~~~~-~~~~v~~~~s~~~~~~---------- 179 (248)
T PRK10926 133 ---------------------RFKNLVLVHAARYAADL-SYLPLMQELEQRYE-GKLRIQTVVSRETAPG---------- 179 (248)
T ss_pred ---------------------CCCcEEEEEeCCcHHHH-HHHHHHHHHHHhCc-CCEEEEEEECCCCCCC----------
Confidence 14679999999999886 68888888866532 3567766665421000
Q ss_pred HhhhcccCCCccccCCccccccCCCCHHHHH-----HHHHhh-CCCCeEEEEEeCChhHHHHHHHHHHhh
Q 002711 811 QSIHHAKNGLDIVSGTRVKTHFARPNWRTVF-----KHVAVK-HTDERVGVFYCGAPGLTGELRRLSQDF 874 (889)
Q Consensus 811 ~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~-----~~~~~~-~~~~~v~V~~CGP~~m~~~vr~~~~~~ 874 (889)
...||.+ +++ .+.... .......||+|||++|++.+++.+.+.
T Consensus 180 -------------------~~~G~v~--~~i~~~~l~~~~~~~~~~~~~~vy~CGp~~Mv~~~~~~l~~~ 228 (248)
T PRK10926 180 -------------------SLTGRVP--ALIESGELEAAVGLPMDAETSHVMLCGNPQMVRDTQQLLKET 228 (248)
T ss_pred -------------------CcCCccc--hhhhcchHHHHhcCCCCccCCEEEEECCHHHHHHHHHHHHHh
Confidence 0013322 111 111111 111235799999999999999998764
|
|
| >cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-23 Score=220.55 Aligned_cols=209 Identities=18% Similarity=0.284 Sum_probs=152.9
Q ss_pred EEEEEecCCEEEEEEecCC-CCccCCccEEEEEEcC-CCCCcccceeeeecC-CCCceEEEEEecCcchHHHHHHHhhcc
Q 002711 581 LKVAVYPGNVLALQMSKPQ-GFKYTSGQYIFVNCAA-VSQFQWHPFSITSAP-GDDYLSIHIRTLGDWTSQLKSIFAKVC 657 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~-~~~~~pGQyv~l~~p~-is~~e~HPFTIaSaP-~~~~l~l~Ir~~G~wT~~L~~~~~~~~ 657 (889)
.+++.+.+++.+|++..|. .+.|+||||+.|.+|. ..++.+|||||+|.| +++.++|+||..|.+|+.|.++
T Consensus 2 ~~~~~~t~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~ySi~s~~~~~~~l~l~v~~~G~~s~~l~~l----- 76 (246)
T cd06218 2 LSNREIADDIYRLVLEAPEIAAAAKPGQFVMLRVPDGSDPLLRRPISIHDVDPEEGTITLLYKVVGKGTRLLSEL----- 76 (246)
T ss_pred cceeEecCCeEEEEEeCcchhccCCCCcEEEEEeCCCCCCcCCCceEeeeccCCCCEEEEEEEEECcchHHHhcC-----
Confidence 4577888999999999887 6789999999999986 456789999999988 4789999999999999877431
Q ss_pred CCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccc
Q 002711 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGIT 737 (889)
Q Consensus 658 ~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~ 737 (889)
++|+ +|.|.||||.........+.++|||||+||||++|+++++...
T Consensus 77 ---------------~~Gd------~v~i~gP~G~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~------------ 123 (246)
T cd06218 77 ---------------KAGD------ELDVLGPLGNGFDLPDDDGKVLLVGGGIGIAPLLFLAKQLAER------------ 123 (246)
T ss_pred ---------------CCCC------EEEEEecCCCCcCCCCCCCcEEEEecccCHHHHHHHHHHHHhc------------
Confidence 2576 8999999997432223467999999999999999999987541
Q ss_pred cCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhccc
Q 002711 738 EDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAK 817 (889)
Q Consensus 738 ~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~ 817 (889)
.++++++|++|+.+++ .|.++|.++.. . ++. .+.. +.
T Consensus 124 ---------------~~~v~l~~~~r~~~d~-~~~~eL~~l~~-----~--~~~-~~~~---~~---------------- 160 (246)
T cd06218 124 ---------------GIKVTVLLGFRSADDL-FLVEEFEALGA-----E--VYV-ATDD---GS---------------- 160 (246)
T ss_pred ---------------CCceEEEEEccchhhh-hhHHHHHhhCC-----c--EEE-EcCC---CC----------------
Confidence 3579999999999985 56777766531 1 221 1110 00
Q ss_pred CCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 818 NGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 818 ~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.+ .+..+.+.+.+..... ....||+|||++|++++++.+.+.+ ....++-|++
T Consensus 161 ------~~-------~~g~v~~~l~~~~~~~--~~~~vyiCGp~~mv~~~~~~L~~~G----v~~~~~~~~~ 213 (246)
T cd06218 161 ------AG-------TKGFVTDLLKELLAEA--RPDVVYACGPEPMLKAVAELAAERG----VPCQVSLEER 213 (246)
T ss_pred ------CC-------cceehHHHHHHHhhcc--CCCEEEEECCHHHHHHHHHHHHhcC----CCEEEEeccc
Confidence 00 0112334444433321 2358999999999999999998753 3466777764
|
Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster. |
| >PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-23 Score=224.42 Aligned_cols=225 Identities=19% Similarity=0.262 Sum_probs=154.1
Q ss_pred cccEEEEEEEEecCCE--EEEEEecC---CCCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHH
Q 002711 575 YKSVRILKVAVYPGNV--LALQMSKP---QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQ 648 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v--~~l~~~~p---~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~ 648 (889)
++.++|++++.+++++ +.|.+..| ..+.|+||||+.|++|.. ..|||||+|+|. ++.++|+||..|.+|+.
T Consensus 5 ~~~~~V~~~~~~t~d~~~~~l~~~~~~~~~~~~~~pGQ~v~l~~~~~---~~~pySias~p~~~~~l~l~Ik~~G~~S~~ 81 (289)
T PRK08345 5 LHDAKILEVYDLTEREKLFLLRFEDPELAESFTFKPGQFVQVTIPGV---GEVPISICSSPTRKGFFELCIRRAGRVTTV 81 (289)
T ss_pred ceeEEEEEEEecCCCCCEEEEEEeCccccCCCCcCCCCEEEEEcCCC---CceeeEecCCCCCCCEEEEEEEeCChHHHH
Confidence 3568899999998874 44555444 247899999999999864 348999999986 46899999999999998
Q ss_pred HHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC-CCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHh
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA-QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK 727 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~-~~~~~~~~vllVagGiGITP~lsil~~l~~~~~ 727 (889)
|.+ + ++|+ +|.|+||||.+. .+....+.++|||||+||||++|++++++.+..
T Consensus 82 L~~-l-------------------~~Gd------~v~v~gP~G~~f~~~~~~~~~~llIAgGtGIaP~~s~l~~~l~~~~ 135 (289)
T PRK08345 82 IHR-L-------------------KEGD------IVGVRGPYGNGFPVDEMEGMDLLLIAGGLGMAPLRSVLLYAMDNRW 135 (289)
T ss_pred HHh-C-------------------CCCC------EEEEeCCCCCCCCcccccCceEEEEecccchhHHHHHHHHHHhcCC
Confidence 753 2 2576 899999999843 222234589999999999999999999875310
Q ss_pred hhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHH
Q 002711 728 QQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALI 807 (889)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~ 807 (889)
..++++|+|++|+.+++ +|.++|.++++.. ..+.++.++++..+ .+...
T Consensus 136 ------------------------~~~~v~l~~~~r~~~d~-~~~deL~~l~~~~--~~~~~~~~~s~~~~-~~~~~--- 184 (289)
T PRK08345 136 ------------------------KYGNITLIYGAKYYEDL-LFYDELIKDLAEA--ENVKIIQSVTRDPE-WPGCH--- 184 (289)
T ss_pred ------------------------CCCcEEEEEecCCHHHh-hHHHHHHHHHhcC--CCEEEEEEecCCCC-CcCcc---
Confidence 13689999999999987 6888888876532 46888877775211 10000
Q ss_pred HHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 808 TMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 808 ~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
+ ...+..-....|+. .+++.+.. .+.....||+|||++|++.+++.+.+...
T Consensus 185 -----------~--~~~~~~~~~~~g~v--~~~~~~~~--~~~~~~~vyiCGP~~m~~~v~~~L~~~Gv 236 (289)
T PRK08345 185 -----------G--LPQGFIERVCKGVV--TDLFREAN--TDPKNTYAAICGPPVMYKFVFKELINRGY 236 (289)
T ss_pred -----------c--cccccccccccCch--hhhhhhcC--CCccccEEEEECCHHHHHHHHHHHHHcCC
Confidence 0 00000000111222 12222111 11133579999999999999999887653
|
|
| >COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=214.88 Aligned_cols=222 Identities=23% Similarity=0.363 Sum_probs=168.1
Q ss_pred ccccEEEEEEEEecCCEEEEEEecCCCCc--cCCccEEEEEEcCCCCCcccceeeeecCCCC-ceEEEEEec--CcchHH
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQGFK--YTSGQYIFVNCAAVSQFQWHPFSITSAPGDD-YLSIHIRTL--GDWTSQ 648 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~l~~~~p~~~~--~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~-~l~l~Ir~~--G~wT~~ 648 (889)
.+..++|++++..+.+++++++..|.+.. |+||||+.|.++.-....++.|||+|+|.++ .+.+.||+. |..|+.
T Consensus 4 ~~~~~~V~~v~~~t~di~sf~l~~~~g~~~~f~pGQ~i~v~l~~~~~~~~R~YSl~s~p~~~~~~~isVk~~~~G~~S~~ 83 (266)
T COG1018 4 GFRRVTVTSVEPETDDVFSFTLEPPDGLRLDFEPGQYITVGLPNGGEPLLRAYSLSSAPDEDSLYRISVKREDGGGGSNW 83 (266)
T ss_pred ceEEEEEEEEEEecCceEEEEEEcCCCCccccCCCCeEEEEecCCCceeeEEEEeccCCCCCceEEEEEEEeCCCcccHH
Confidence 35678999999999999999999998875 9999999999997766899999999999876 899999987 445555
Q ss_pred HHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhh
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQ 728 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~ 728 (889)
|. ..+++|+ +|.|.+|.|.+..+....++++|+||||||||++||++++....
T Consensus 84 Lh-------------------~~lk~Gd------~l~v~~P~G~F~l~~~~~~~~llla~G~GITP~lSml~~~~~~~-- 136 (266)
T COG1018 84 LH-------------------DHLKVGD------TLEVSAPAGDFVLDDLPERKLLLLAGGIGITPFLSMLRTLLDRG-- 136 (266)
T ss_pred HH-------------------hcCCCCC------EEEEecCCCCccCCCCCCCcEEEEeccccHhHHHHHHHHHHHhC--
Confidence 44 4556898 89999999999766544557999999999999999999986541
Q ss_pred hhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHH
Q 002711 729 QKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALIT 808 (889)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~ 808 (889)
. .+|.|++++|+.+++ -|.++ ++++.... +...++.|... +
T Consensus 137 -----------------------~-~~v~l~h~~R~~~~~-af~de-~~l~~~~~-~~~~~~~~~~~----~-------- 177 (266)
T COG1018 137 -----------------------P-ADVVLVHAARTPADL-AFRDE-LELAAELP-NALLLGLYTER----G-------- 177 (266)
T ss_pred -----------------------C-CCEEEEEecCChhhc-chhhH-HHHHhhCC-CCeeEEEEEec----C--------
Confidence 3 679999999999997 47776 66654432 23444444320 0
Q ss_pred HHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeC
Q 002711 809 MLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKEN 888 (889)
Q Consensus 809 ~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~ 888 (889)
-.-||++...+.... .+.. ..+|+|||.+|++.++..+.++... .=.+|.|.
T Consensus 178 ---------------------~~~g~~~~~~l~~~~---~~~~-r~~y~CGp~~fm~av~~~l~~~g~~---~~~vh~E~ 229 (266)
T COG1018 178 ---------------------KLQGRIDVSRLLSAA---PDGG-REVYLCGPGPFMQAVRLALEALGVP---DDRVHLEG 229 (266)
T ss_pred ---------------------CccccccHHHHhccC---CCCC-CEEEEECCHHHHHHHHHHHHHcCCC---hhcEEEee
Confidence 011456555432221 1122 5799999999999999999877543 44678887
Q ss_pred C
Q 002711 889 F 889 (889)
Q Consensus 889 F 889 (889)
|
T Consensus 230 F 230 (266)
T COG1018 230 F 230 (266)
T ss_pred c
Confidence 7
|
|
| >PRK05713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=226.41 Aligned_cols=212 Identities=18% Similarity=0.311 Sum_probs=155.4
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEe--cCcchHHHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRT--LGDWTSQLKSI 652 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~--~G~wT~~L~~~ 652 (889)
...+|++++.+.+++.+|+++.+..+.|+||||+.|.++. -.+|||||+|.|. ++.++|+||. .|.+|..|.+
T Consensus 92 ~~~~V~~~~~~t~dv~~l~l~~~~~~~~~~GQfv~l~~~~---~~~R~ySias~p~~~~~l~~~I~~~~~G~~s~~l~~- 167 (312)
T PRK05713 92 LPARVVALDWLGGDVLRLRLEPERPLRYRAGQHLVLWTAG---GVARPYSLASLPGEDPFLEFHIDCSRPGAFCDAARQ- 167 (312)
T ss_pred CCeEEEEEecCCCCEEEEEEccCCcCCcCCCCEEEEecCC---CcccccccCcCCCCCCeEEEEEEEcCCCccchhhhc-
Confidence 4588999999999999999987777899999999999864 2689999999996 4789999985 4667876632
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC-CCCC-CCCEEEEEEcCcchhhHHHHHHHHHHHHhhhh
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA-QDYK-DYDVLLLVGLGIGATPLISIIKDVLNNIKQQK 730 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~-~~~~-~~~~vllVagGiGITP~lsil~~l~~~~~~~~ 730 (889)
+ ++|+ +|.|.||+|... .+.. ..+.+||||||+||||++||+++++...
T Consensus 168 l-------------------~~Gd------~v~l~~p~gg~~~~~~~~~~~~~vlIAgGtGiaP~~s~l~~~~~~~---- 218 (312)
T PRK05713 168 L-------------------QVGD------LLRLGELRGGALHYDPDWQERPLWLLAAGTGLAPLWGILREALRQG---- 218 (312)
T ss_pred C-------------------CCCC------EEEEccCCCCceEecCCCCCCcEEEEecCcChhHHHHHHHHHHhcC----
Confidence 2 3677 899999998532 1111 3467999999999999999999986541
Q ss_pred hcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHH
Q 002711 731 EIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITML 810 (889)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~ 810 (889)
..++++|+|++|+.+++ +|.++|+++++.. .+++++..++..
T Consensus 219 ---------------------~~~~v~l~~g~r~~~d~-~~~~el~~l~~~~--~~~~~~~~~~~~-------------- 260 (312)
T PRK05713 219 ---------------------HQGPIRLLHLARDSAGH-YLAEPLAALAGRH--PQLSVELVTAAQ-------------- 260 (312)
T ss_pred ---------------------CCCcEEEEEEcCchHHh-hhHHHHHHHHHHC--CCcEEEEEECcc--------------
Confidence 13679999999999987 6888888887643 346665433210
Q ss_pred HhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 811 QSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 811 ~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
..+++.++.. . .....||+|||++|++.+++.+.+.. -..-.+|.|.|
T Consensus 261 --------------------------~~~~l~~~~~-~-~~~~~vyiCGp~~mv~~~~~~L~~~G---v~~~~i~~e~F 308 (312)
T PRK05713 261 --------------------------LPAALAELRL-V-SRQTMALLCGSPASVERFARRLYLAG---LPRNQLLADVF 308 (312)
T ss_pred --------------------------hhhhhhhccC-C-CCCeEEEEeCCHHHHHHHHHHHHHcC---CCHHHeeeccc
Confidence 0111111110 1 12357999999999999999987653 23445677776
|
|
| >cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=211.06 Aligned_cols=202 Identities=16% Similarity=0.268 Sum_probs=150.0
Q ss_pred EEEEecCCEEEEEEecCCCC---ccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEecCc---chHHHHHHHh
Q 002711 582 KVAVYPGNVLALQMSKPQGF---KYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTLGD---WTSQLKSIFA 654 (889)
Q Consensus 582 ~v~~~~~~v~~l~~~~p~~~---~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~G~---wT~~L~~~~~ 654 (889)
+++.+.+++.++++..|... .|+||||+.|++|. ..+|||||+|.|.+ +.+.|+||..++ .|..|.+..
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~~~l~~~~---~~~r~ySi~s~~~~~~~l~~~v~~~~~g~~~s~~l~~~~- 77 (211)
T cd06185 2 RIRDEAPDIRSFELEAPDGAPLPAFEPGAHIDVHLPN---GLVRQYSLCGDPADRDRYRIAVLREPASRGGSRYMHELL- 77 (211)
T ss_pred ceEEcCCCeEEEEEEeCCCCcCCCCCCCceEEEEcCC---CCceeeeccCCCCCCCEEEEEEEeccCCCchHHHHHhcC-
Confidence 45677899999999988763 89999999999986 36899999999875 889999998753 566655433
Q ss_pred hccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 655 KVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 655 ~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ ++.|.||||.+... ...+.+++||||+||||++|+++++...
T Consensus 78 ------------------~~Gd------~v~i~gP~g~f~~~-~~~~~~v~ia~GtGiap~~~il~~~~~~--------- 123 (211)
T cd06185 78 ------------------RVGD------ELEVSAPRNLFPLD-EAARRHLLIAGGIGITPILSMARALAAR--------- 123 (211)
T ss_pred ------------------CCCC------EEEEcCCccCCcCC-CCCCcEEEEeccchHhHHHHHHHHHHhC---------
Confidence 2576 89999999987543 2356899999999999999999987531
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
.++++++|++|+.+++. +.++|.+++ ...+. ++.+..
T Consensus 124 ------------------~~~v~l~~~~r~~~~~~-~~~~l~~~~----~~~~~--~~~~~~------------------ 160 (211)
T cd06185 124 ------------------GADFELHYAGRSREDAA-FLDELAALP----GDRVH--LHFDDE------------------ 160 (211)
T ss_pred ------------------CCCEEEEEEeCCCcchh-HHHHHhhhc----CCcEE--EEECCC------------------
Confidence 35699999999998863 666666654 12333 222210
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.+|++..+++... + ....||+|||+.|++++++.+.+.+. ..=.+|.|.|
T Consensus 161 -----------------~~~~~~~~~~~~~----~-~~~~vyicGp~~m~~~~~~~l~~~gv---~~~~i~~e~F 210 (211)
T cd06185 161 -----------------GGRLDLAALLAAP----P-AGTHVYVCGPEGMMDAVRAAAAALGW---PEARLHFERF 210 (211)
T ss_pred -----------------CCccCHHHHhccC----C-CCCEEEEECCHHHHHHHHHHHHHcCC---ChhheEeeec
Confidence 0356666665542 1 13479999999999999999987643 3446777877
|
PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal. |
| >cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=212.92 Aligned_cols=200 Identities=22% Similarity=0.339 Sum_probs=148.2
Q ss_pred EEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhcc
Q 002711 578 VRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVC 657 (889)
Q Consensus 578 ~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~~ 657 (889)
++|.++..+++++.+++++.| +.|+||||+.|.+|.. ..|||||+|.| +.+.|+||..|.+|+.|.+ .
T Consensus 1 ~~v~~~~~~t~~~~~~~l~~~--~~~~pGQ~v~l~~~~~---~~~~~Si~s~~--~~l~~~v~~~G~~s~~L~~-l---- 68 (233)
T cd06220 1 VTIKEVIDETPTVKTFVFDWD--FDFKPGQFVMVWVPGV---DEIPMSLSYID--GPNSITVKKVGEATSALHD-L---- 68 (233)
T ss_pred CEEEEEEEEcCCEEEEEEecC--CCCCCCceEEEEeCCC---CcceeEEecCC--CeEEEEEEecChHHHHHHh-c----
Confidence 467888999999999999875 5899999999999864 46999999998 7899999999999999875 3
Q ss_pred CCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccc
Q 002711 658 QPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGIT 737 (889)
Q Consensus 658 ~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~ 737 (889)
++|+ ++.|.||||.+.. .. ++.+++||||+||||++|+++++..+
T Consensus 69 ---------------~~Gd------~v~i~gP~G~~f~-~~-~~~~vliAgGtGitP~~sil~~~~~~------------ 113 (233)
T cd06220 69 ---------------KEGD------KLGIRGPYGNGFE-LV-GGKVLLIGGGIGIAPLAPLAERLKKA------------ 113 (233)
T ss_pred ---------------CCCC------EEEEECcCCCCcc-CC-CCeEEEEecCcChHHHHHHHHHHHhc------------
Confidence 2577 8999999998432 22 67999999999999999999987532
Q ss_pred cCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhccc
Q 002711 738 EDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAK 817 (889)
Q Consensus 738 ~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~ 817 (889)
++++|+|.+|+.+++ .+.++|++ . ..+ + +++.. ..
T Consensus 114 ----------------~~i~l~~~~r~~~d~-~~~~eL~~---~---~~~--~-~~~~~---~~---------------- 148 (233)
T cd06220 114 ----------------ADVTVLLGARTKEEL-LFLDRLRK---S---DEL--I-VTTDD---GS---------------- 148 (233)
T ss_pred ----------------CCEEEEEecCChHHC-hhHHHHhh---C---CcE--E-EEEeC---CC----------------
Confidence 469999999999886 46666654 1 112 1 12210 00
Q ss_pred CCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 818 NGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 818 ~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
.+ ..|+. .+++.+... .....||+|||++|++.+++.+.+.+. ...+|.|.|
T Consensus 149 ------~~-----~~g~~--~~~l~~~~~---~~~~~vyicGp~~m~~~~~~~L~~~g~----~~~i~~e~f 200 (233)
T cd06220 149 ------YG-----FKGFV--TDLLKELDL---EEYDAIYVCGPEIMMYKVLEILDERGV----RAQFSLERY 200 (233)
T ss_pred ------Cc-----cccee--hHHHhhhcc---cCCCEEEEECCHHHHHHHHHHHHhcCC----cEEEEeccc
Confidence 00 01222 234443331 122369999999999999999977533 577888876
|
Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster. |
| >cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=214.39 Aligned_cols=144 Identities=22% Similarity=0.382 Sum_probs=118.4
Q ss_pred EEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecC-CCCceEEEEEecCcchHHHHHHHhhc
Q 002711 579 RILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSIHIRTLGDWTSQLKSIFAKV 656 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP-~~~~l~l~Ir~~G~wT~~L~~~~~~~ 656 (889)
+|++++.+.+++..+++..|.. ..|+||||+.|+++.. .++|||||+|+| +++.++|+||..|..|..|.++.
T Consensus 2 ~v~~~~~~t~d~~~~~l~~~~~~~~~~pGQf~~l~~~~~--~~~~pySi~s~~~~~~~~~~~vk~~G~~t~~l~~l~--- 76 (248)
T cd06219 2 KILEKEELAPNVKLFEIEAPLIAKKAKPGQFVIVRADEK--GERIPLTIADWDPEKGTITIVVQVVGKSTRELATLE--- 76 (248)
T ss_pred EEEEEEEeCCCeEEEEEEChhhhccCCCCcEEEEEcCCC--CCccceEeEEEcCCCCEEEEEEEeCCchHHHHHhcC---
Confidence 5778888999999999998753 5799999999998642 478999999986 46789999999999998774422
Q ss_pred cCCCCCCCccccccccccCCCCCCccEE-EEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccc
Q 002711 657 CQPPSVDQSGLLRADIGQADNRPRIPKL-LIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEG 735 (889)
Q Consensus 657 ~~~~~~~~s~~l~~~~~~g~~~~~~~~v-~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~ 735 (889)
+|+ ++ .|+||||.+.. ..+++.+||||||+||||++|+++++...
T Consensus 77 -----------------~G~------~v~~i~gP~G~~~~-~~~~~~~lliagG~GiaP~~~~l~~~~~~---------- 122 (248)
T cd06219 77 -----------------EGD------KIHDVVGPLGKPSE-IENYGTVVFVGGGVGIAPIYPIAKALKEA---------- 122 (248)
T ss_pred -----------------CCC------EeeeeecCCCCCee-cCCCCeEEEEeCcccHHHHHHHHHHHHHc----------
Confidence 566 78 69999999753 23467899999999999999999997542
Q ss_pred cccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHH
Q 002711 736 ITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVA 779 (889)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~ 779 (889)
.++++|+|++|+.+++ +|.++|.+++
T Consensus 123 -----------------~~~v~l~~~~r~~~~~-~~~~el~~l~ 148 (248)
T cd06219 123 -----------------GNRVITIIGARTKDLV-ILEDEFRAVS 148 (248)
T ss_pred -----------------CCeEEEEEEcCCHHHh-hhHHHHHhhc
Confidence 2579999999999986 6777777764
|
Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD, |
| >cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=214.80 Aligned_cols=144 Identities=20% Similarity=0.316 Sum_probs=118.1
Q ss_pred EEEEEecCCEEEEEEecCC-CCccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHHHHHhhccC
Q 002711 581 LKVAVYPGNVLALQMSKPQ-GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLKSIFAKVCQ 658 (889)
Q Consensus 581 ~~v~~~~~~v~~l~~~~p~-~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~~~~~~~~~ 658 (889)
++++.+++++.+|++..|. .+.|+||||++|++|......+|||||+|.|. +++++|+||..|..|+.|.++
T Consensus 2 ~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~rpySi~s~~~~~~~l~l~i~~~G~~t~~l~~~------ 75 (243)
T cd06192 2 VKKEQLEPNLVLLTIKAPLAARLFRPGQFVFLRNFESPGLERIPLSLAGVDPEEGTISLLVEIRGPKTKLIAEL------ 75 (243)
T ss_pred ceEEEecCCEEEEEEEccchhhcCCCCCeEEEecCCCCCceeeeeEeeecCCCCCEEEEEEEEcCchHHHHHhC------
Confidence 4567788999999999875 37899999999999754456899999999974 689999999999999887532
Q ss_pred CCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccccccc
Q 002711 659 PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITE 738 (889)
Q Consensus 659 ~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~ 738 (889)
++|+ .+.|.||||.+.......+.++|||||+||||++++++++..+
T Consensus 76 --------------~~G~------~l~i~gP~G~~~~~~~~~~~~lliagGtGiap~~~~l~~~~~~------------- 122 (243)
T cd06192 76 --------------KPGE------KLDVMGPLGNGFEGPKKGGTVLLVAGGIGLAPLLPIAKKLAAN------------- 122 (243)
T ss_pred --------------CCCC------EEEEEccCCCCCccCCCCCEEEEEeCcccHHHHHHHHHHHHHC-------------
Confidence 2576 8999999998754333467999999999999999999998642
Q ss_pred CCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHH
Q 002711 739 DGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 739 ~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el 778 (889)
.++++++|++|+.+++ ++.++|.++
T Consensus 123 --------------~~~v~l~~~~r~~~d~-~~~~el~~~ 147 (243)
T cd06192 123 --------------GNKVTVLAGAKKAKEE-FLDEYFELP 147 (243)
T ss_pred --------------CCeEEEEEecCcHHHH-HHHHHHHhh
Confidence 3579999999999985 567766654
|
Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi |
| >PRK08221 anaerobic sulfite reductase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-22 Score=213.96 Aligned_cols=207 Identities=18% Similarity=0.230 Sum_probs=150.3
Q ss_pred cEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhc
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~ 656 (889)
..+|++++.+++++.++++..| +.|+||||+.|.+|... .|||||++.+ ++.++|+||..|..|..|.+ +
T Consensus 9 ~~~v~~i~~~t~~~~~~~l~~~--~~~~pGQfi~l~~~~~~---~~pySi~~~~-~~~~~~~Ik~~G~~S~~L~~-l--- 78 (263)
T PRK08221 9 AYKILDITKHTDIEYTFRVEVD--GPVKPGQFFEVSLPKVG---EAPISVSDYG-DGYIDLTIRRVGKVTDEIFN-L--- 78 (263)
T ss_pred cEEEEEEeccCCcEEEEEecCC--CCCCCCceEEEEeCCCC---cceeeccCCC-CCEEEEEEEeCCchhhHHHh-C---
Confidence 4788899999999999999876 57899999999998643 4999999876 67899999999999988754 2
Q ss_pred cCCCCCCCccccccccccCCCCCCccEEEEeCCCCC-CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccc
Q 002711 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA-PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEG 735 (889)
Q Consensus 657 ~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~-~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~ 735 (889)
++|+ .|.|.||||. +..+....+.+||||||+||||++|++++++.+..
T Consensus 79 ----------------~~Gd------~v~v~gP~G~~f~~~~~~~~~~llIAgGtGItP~~sil~~~~~~~~-------- 128 (263)
T PRK08221 79 ----------------KEGD------KLFLRGPYGNGFPVDTYKGKELIVVAGGTGVAPVKGLMRYFYENPQ-------- 128 (263)
T ss_pred ----------------CCCC------EEEEECCCCCCcccCccCCccEEEEcccccHHHHHHHHHHHHhCcc--------
Confidence 2677 8999999998 44333345689999999999999999999865311
Q ss_pred cccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhc
Q 002711 736 ITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHH 815 (889)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~ 815 (889)
..++++|+|++|+.+++ .+.++|.++++. .. ++..+++..+ .
T Consensus 129 ----------------~~~~v~L~~g~r~~~~l-~~~~el~~~~~~---~~--~~~~~~~~~~-~--------------- 170 (263)
T PRK08221 129 ----------------EIKSLDLILGFKNPDDI-LFKEDLKRWREK---IN--LILTLDEGEE-G--------------- 170 (263)
T ss_pred ----------------cCceEEEEEecCCHHHh-hHHHHHHHHhhc---Cc--EEEEecCCCC-C---------------
Confidence 13689999999999986 678888877652 12 2222222100 0
Q ss_pred ccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 816 AKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 816 ~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
...+.||.+ +.+.+.... ......||+||||+|++++++...+...
T Consensus 171 ------------~~~~~G~v~--~~l~~~~~~-~~~~~~vylCGp~~mv~~~~~~L~~~Gv 216 (263)
T PRK08221 171 ------------YRGNVGLVT--KYIPELTLK-DIDNMQVIVVGPPIMMKFTVLEFLKRGI 216 (263)
T ss_pred ------------CccCccccC--hhhHhccCC-CcCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 011235554 222222111 1134679999999999999999887643
|
|
| >PLN03116 ferredoxin--NADP+ reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-22 Score=217.53 Aligned_cols=236 Identities=13% Similarity=0.152 Sum_probs=154.4
Q ss_pred ccEEEEEEEEec-----CCEEEEEEecCCCCccCCccEEEEEEcCCC------CCcccceeeeecCCC-----CceEEEE
Q 002711 576 KSVRILKVAVYP-----GNVLALQMSKPQGFKYTSGQYIFVNCAAVS------QFQWHPFSITSAPGD-----DYLSIHI 639 (889)
Q Consensus 576 ~~~~i~~v~~~~-----~~v~~l~~~~p~~~~~~pGQyv~l~~p~is------~~e~HPFTIaSaP~~-----~~l~l~I 639 (889)
...+|++++.+. +++.+|++..|..+.|+||||+.|..|... +..+++|||+|+|.+ ..++|+|
T Consensus 25 ~~~~V~~i~~~~~p~~~~~v~~l~l~~~~~~~f~aGQy~~l~~~~~~~~~~g~~~~~R~YSIaS~p~~~~~~~~~lel~V 104 (307)
T PLN03116 25 YTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGTNPKKPGAPHNVRLYSIASTRYGDDFDGKTASLCV 104 (307)
T ss_pred EEEEEEeeEEcccCCCCCceEEEEEecCCCCceecCceEeeeCCCCChhhcCCcCCceeEEecCCCCCcCCCCCEEEEEE
Confidence 467888898887 899999999988899999999999876421 124899999999942 2699999
Q ss_pred EecCcchHHHHHHHhhccC-CCCCCCccccccccccCCCCCCccEEEEeCCCCCCCC-CC-CCCCEEEEEEcCcchhhHH
Q 002711 640 RTLGDWTSQLKSIFAKVCQ-PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQ-DY-KDYDVLLLVGLGIGATPLI 716 (889)
Q Consensus 640 r~~G~wT~~L~~~~~~~~~-~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~-~~-~~~~~vllVagGiGITP~l 716 (889)
|...--+.... ..+ .+.|..|.++.. +++|+ .|.|.||+|.+.. +- ...+.+||||||+||||++
T Consensus 105 r~~~~~~~~~~-----~~~~~~~G~~S~~L~~-l~~Gd------~v~v~gP~G~f~~~~~~~~~~~~vlIAgGtGIaP~~ 172 (307)
T PLN03116 105 RRAVYYDPETG-----KEDPAKKGVCSNFLCD-AKPGD------KVQITGPSGKVMLLPEEDPNATHIMVATGTGIAPFR 172 (307)
T ss_pred EEEEEecCCcC-----CCCCccCcchhhhHhh-CCCCC------EEEEEEecCCceeCCCCCCCCcEEEEecCccHHHHH
Confidence 97511000000 000 023334444443 55787 8999999999753 21 2346899999999999999
Q ss_pred HHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeecc
Q 002711 717 SIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSV 796 (889)
Q Consensus 717 sil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~ 796 (889)
||+++++....... ....+++|+|++|+.+++ .|.++|.++++... .++.++..+++.
T Consensus 173 sml~~~l~~~~~~~--------------------~~~~~v~L~~g~R~~~d~-~~~deL~~l~~~~~-~~~~~~~~~sr~ 230 (307)
T PLN03116 173 GFLRRMFMEDVPAF--------------------KFGGLAWLFLGVANSDSL-LYDDEFERYLKDYP-DNFRYDYALSRE 230 (307)
T ss_pred HHHHHHHhhccccc--------------------cCCCcEEEEEecCCcccc-hHHHHHHHHHHhCC-CcEEEEEEEccC
Confidence 99998865421000 013579999999999986 58888888766542 357777655542
Q ss_pred ccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhh---CCCCeEEEEEeCChhHHHHHHHHHHh
Q 002711 797 YEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVK---HTDERVGVFYCGAPGLTGELRRLSQD 873 (889)
Q Consensus 797 ~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~---~~~~~v~V~~CGP~~m~~~vr~~~~~ 873 (889)
.+.. .| ++-...+.+.+.... .......||+|||++|++.+++++.+
T Consensus 231 ~~~~-----------------------~g-------~~g~v~~~l~~~~~~~~~~~~~~~~vYiCGp~~mv~~v~~~L~~ 280 (307)
T PLN03116 231 QKNK-----------------------KG-------GKMYVQDKIEEYSDEIFKLLDNGAHIYFCGLKGMMPGIQDTLKR 280 (307)
T ss_pred Cccc-----------------------CC-------CccchhhHHHHHHHHHHhhhcCCcEEEEeCCHHHHHHHHHHHHH
Confidence 1100 00 011112222221110 01123579999999999999888777
Q ss_pred hh
Q 002711 874 FS 875 (889)
Q Consensus 874 ~~ 875 (889)
..
T Consensus 281 ~~ 282 (307)
T PLN03116 281 VA 282 (307)
T ss_pred HH
Confidence 64
|
|
| >PTZ00274 cytochrome b5 reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-22 Score=217.05 Aligned_cols=224 Identities=13% Similarity=0.179 Sum_probs=158.2
Q ss_pred hhccccEEEEEEEEecCCEEEEEEecCC--CCccCCccEEEEEEcC-C--CCCcccceeeeecCC-CCceEEEEEec--C
Q 002711 572 RSGYKSVRILKVAVYPGNVLALQMSKPQ--GFKYTSGQYIFVNCAA-V--SQFQWHPFSITSAPG-DDYLSIHIRTL--G 643 (889)
Q Consensus 572 r~~~~~~~i~~v~~~~~~v~~l~~~~p~--~~~~~pGQyv~l~~p~-i--s~~e~HPFTIaSaP~-~~~l~l~Ir~~--G 643 (889)
...++.++|.+++.+++++.+++|..|. .+.++||||+.+.++. . ....++||||+|+|+ +++++|+||.. |
T Consensus 49 ~~~~~~~~V~~i~~~t~dv~~f~f~lp~~~~~~f~pGQ~l~l~~~~~~~~~~~~~R~YSiaS~p~~~~~le~~IK~~~~G 128 (325)
T PTZ00274 49 SQRYEPYQLGEVIPITHDTALFRFLLHSEEEFNLKPCSTLQACYKYGVQPMDQCQRFYTPVTANHTKGYFDIIVKRKKDG 128 (325)
T ss_pred CCceEEEEEEEEEEeCCCeEEEEEeCCcccccCCCCccEEEEEEecCCCCCCEEEEeeecCCCCCCCCeEEEEEEEcCCC
Confidence 4567889999999999999999998754 6899999999987763 2 123589999999996 57899999986 4
Q ss_pred cchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHH
Q 002711 644 DWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVL 723 (889)
Q Consensus 644 ~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~ 723 (889)
..|..|.+ +++|+ .|.|.||+|....+....+.+|||||||||||++||+++++
T Consensus 129 ~~S~~L~~--------------------lk~Gd------~v~v~GP~f~~~~~~~~~~~lvlIAGGsGITP~lsmlr~~l 182 (325)
T PTZ00274 129 LMTNHLFG--------------------MHVGD------KLLFRSVTFKIQYRPNRWKHVGMIAGGTGFTPMLQIIRHSL 182 (325)
T ss_pred cccHHHhc--------------------CCCCC------EEEEeCCeeecccCCCCCceEEEEeCCcchhHHHHHHHHHH
Confidence 45666653 34788 89999998876433333468999999999999999999987
Q ss_pred HHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChh
Q 002711 724 NNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDAR 803 (889)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~ 803 (889)
.+..... .....+|+|+|++|+.+++ .|.++|+++++... +.++++..+++..+..+
T Consensus 183 ~~~~~~~-------------------~~~~~~v~Llyg~R~~~di-~~~~eL~~La~~~~-~~f~v~~~ls~~~~~~~-- 239 (325)
T PTZ00274 183 TEPWDSG-------------------EVDRTKLSFLFCNRTERHI-LLKGLFDDLARRYS-NRFKVYYTIDQAVEPDK-- 239 (325)
T ss_pred hcccccc-------------------cCCCCeEEEEEEcCCHHHh-hHHHHHHHHHHhCC-CcEEEEEEeCCCCcccC--
Confidence 6421100 0023589999999999986 68899988876543 35777765553211000
Q ss_pred hHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHH
Q 002711 804 SALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRR 869 (889)
Q Consensus 804 s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~ 869 (889)
. ..+.||.+- .++.+...........||+|||++|++.+..
T Consensus 240 -------------------w-----~g~~G~V~~-~ll~~~~~~~~~~~~~vylCGPp~Mm~av~~ 280 (325)
T PTZ00274 240 -------------------W-----NHFLGYVTK-EMVRRTMPAPEEKKKIIMLCGPDQLLNHVAG 280 (325)
T ss_pred -------------------C-----CCCCCccCH-HHHHHhcCCCccCCcEEEEeCCHHHHHHhcC
Confidence 0 112366552 2333332211112346999999999999965
|
|
| >PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=227.19 Aligned_cols=230 Identities=17% Similarity=0.335 Sum_probs=161.8
Q ss_pred ccEEEEEEEEecCCEEEEEEecC--CCCccCCccEEEEEEcCC-----------------------------CCCcccce
Q 002711 576 KSVRILKVAVYPGNVLALQMSKP--QGFKYTSGQYIFVNCAAV-----------------------------SQFQWHPF 624 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p--~~~~~~pGQyv~l~~p~i-----------------------------s~~e~HPF 624 (889)
+..+|++++.+.+++.++++..| .++.|+||||+.|++|.. ....++||
T Consensus 134 ~~~~V~~~~~ls~~i~~l~l~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~y 213 (409)
T PRK05464 134 WECTVISNDNVATFIKELVLKIPEGEEVPFRAGGYIQIEAPPHKVKYKDFDIPEEYRGDWDKFNLFRLVSKVDEPVIRAY 213 (409)
T ss_pred EEEEEEEcccCCchhheEEEecCCCCcccccCCceEEEEcccccccccccccchhhhhhhhhccccceeccCCCceeeee
Confidence 35788888999999999999887 457899999999999842 12357899
Q ss_pred eeeecCCC-CceEEEEEec-----------CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCC
Q 002711 625 SITSAPGD-DYLSIHIRTL-----------GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA 692 (889)
Q Consensus 625 TIaSaP~~-~~l~l~Ir~~-----------G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~ 692 (889)
||+|+|.+ +.+.|+||.. |..|..|.+ +++|+ .+.|.||+|.
T Consensus 214 Sias~p~~~~~l~~~vr~~~~~~~~~~~~~G~~S~~L~~--------------------l~~Gd------~v~v~gP~G~ 267 (409)
T PRK05464 214 SMANYPEEKGIIMLNVRIATPPPGNPDVPPGIMSSYIFS--------------------LKPGD------KVTISGPFGE 267 (409)
T ss_pred ccCCCCCCCCeEEEEEEEeecCCCcCCCCCCchhhHHHh--------------------CCCCC------EEEEEccccC
Confidence 99999965 5899999973 556665543 34687 8999999999
Q ss_pred CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHH
Q 002711 693 PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFR 772 (889)
Q Consensus 693 ~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~ 772 (889)
+... ...+.+||||||+||||++|++++++.... ..++++|+|++|+.+++ .|.
T Consensus 268 f~~~-~~~~~ivlIAgGtGIaP~~sml~~~l~~~~------------------------~~~~v~L~~g~r~~~d~-~~~ 321 (409)
T PRK05464 268 FFAK-DTDAEMVFIGGGAGMAPMRSHIFDQLKRLK------------------------SKRKISFWYGARSLREM-FYV 321 (409)
T ss_pred cEec-CCCceEEEEEeccChhHHHHHHHHHHhCCC------------------------CCceEEEEEecCCHHHh-hHH
Confidence 8643 345789999999999999999998765311 14689999999999886 577
Q ss_pred HHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhC-CCC
Q 002711 773 GVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKH-TDE 851 (889)
Q Consensus 773 ~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~-~~~ 851 (889)
++++++++.. .++.++..+++..+ .+. ..| +-|+.+ +.+.+.....+ ...
T Consensus 322 ~el~~l~~~~--~~~~~~~~~s~~~~-~~~--------------------~~g-----~~G~v~-~~l~~~~l~~~~~~~ 372 (409)
T PRK05464 322 EDFDQLAAEN--PNFKWHVALSDPLP-EDN--------------------WTG-----YTGFIH-NVLYENYLKDHEAPE 372 (409)
T ss_pred HHHHHHHHhC--CCeEEEEEEcCCCC-CCC--------------------CCC-----ccceeC-HHHHHhhhhhcCCCC
Confidence 7887776543 35666665443211 010 001 113322 12222222211 123
Q ss_pred eEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 852 RVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 852 ~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
...||+|||++|++.+++.+.+.+. ..-.+|.|.|
T Consensus 373 ~~~vyiCGP~~m~~av~~~L~~~Gv---~~~~I~~E~F 407 (409)
T PRK05464 373 DCEYYMCGPPMMNAAVIKMLKDLGV---EDENILLDDF 407 (409)
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCC---CHHHEEEccc
Confidence 4679999999999999999987643 3455677877
|
|
| >cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=211.97 Aligned_cols=233 Identities=14% Similarity=0.201 Sum_probs=153.0
Q ss_pred cEEEEEEEEec-----CCEEEEEEecCCCCccCCccEEEEEEcCCC-----CCcccceeeeecCCC-----CceEEEEEe
Q 002711 577 SVRILKVAVYP-----GNVLALQMSKPQGFKYTSGQYIFVNCAAVS-----QFQWHPFSITSAPGD-----DYLSIHIRT 641 (889)
Q Consensus 577 ~~~i~~v~~~~-----~~v~~l~~~~p~~~~~~pGQyv~l~~p~is-----~~e~HPFTIaSaP~~-----~~l~l~Ir~ 641 (889)
.++|++++.+. +++.++++..+..+.|+|||||.|.+|... +..++||||+|+|.+ +.++|+||.
T Consensus 10 ~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~g~~~~~R~YSIas~p~~~~~~~~~l~l~Vk~ 89 (286)
T cd06208 10 IGKVVSNTRLTGPDAPGEVCHIVIDHGGKLPYLEGQSIGIIPPGTDAKNGKPHKLRLYSIASSRYGDDGDGKTLSLCVKR 89 (286)
T ss_pred EEEEEeceeccCCCCCcceEEEEEeCCCcccccCCceEEEECCCcchhcCCCCCceeeEecCCccccCCCCCEEEEEEEE
Confidence 46788888886 689999999877899999999999876432 134799999999853 589999998
Q ss_pred cCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCC-CCCCEEEEEEcCcchhhHHHHHH
Q 002711 642 LGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY-KDYDVLLLVGLGIGATPLISIIK 720 (889)
Q Consensus 642 ~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~-~~~~~vllVagGiGITP~lsil~ 720 (889)
..++|.... ..+.|..|.++.. +++|+ +|.|.||+|.+.... ...+.++|||||+||||++|+++
T Consensus 90 ~~~~~~~~~-------~~~~G~~S~~L~~-l~~Gd------~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~ 155 (286)
T cd06208 90 LVYTDPETD-------ETKKGVCSNYLCD-LKPGD------DVQITGPVGKTMLLPEDPNATLIMIATGTGIAPFRSFLR 155 (286)
T ss_pred EEEecCCCC-------ceeccchHHHHhh-CCCCC------EEEEEeecCCcccCCCCCCCCEEEEecCccHHHHHHHHH
Confidence 733221000 0011222333322 34677 899999999875322 23457999999999999999999
Q ss_pred HHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCC
Q 002711 721 DVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEG 800 (889)
Q Consensus 721 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~ 800 (889)
+++.+..... ...++++|+|++|+.+++ .|.++|.++++... ..++++..+++..+.
T Consensus 156 ~~~~~~~~~~--------------------~~~~~v~L~~g~r~~~d~-~~~~el~~l~~~~~-~~~~~~~~~sr~~~~- 212 (286)
T cd06208 156 RLFREKHADY--------------------KFTGLAWLFFGVPNSDSL-LYDDELEKYPKQYP-DNFRIDYAFSREQKN- 212 (286)
T ss_pred HHHHhhhccc--------------------CCCCCEEEEEEecCccch-hHHHHHHHHHHhCC-CcEEEEEEEcCCCCC-
Confidence 9876521100 024679999999999986 57888888876432 357777666542110
Q ss_pred ChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHH----HHhhCCCCeEEEEEeCChhHHHHHHHHHHhhh
Q 002711 801 DARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKH----VAVKHTDERVGVFYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 801 d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~----~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 875 (889)
. .|.. |+ +.+.+.+ +..........||+|||++|++.|++.+.++.
T Consensus 213 ~----------------------~g~~-----g~--v~~~i~~~~~~l~~~l~~~~~~vYiCGp~~m~~~v~~~L~~~~ 262 (286)
T cd06208 213 A----------------------DGGK-----MY--VQDRIAEYAEEIWNLLDKDNTHVYICGLKGMEPGVDDALTSVA 262 (286)
T ss_pred C----------------------CCCc-----ee--hhhHHHHhHHHHHHHHhcCCcEEEEeCCchHHHHHHHHHHHHH
Confidence 0 0000 11 1122221 11111122346999999999999999988854
|
Ferredoxin-NADP+ reductase (FNR) is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins, such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2, which then |
| >PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=211.23 Aligned_cols=200 Identities=21% Similarity=0.338 Sum_probs=144.6
Q ss_pred EEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHHHHHhh
Q 002711 578 VRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLKSIFAK 655 (889)
Q Consensus 578 ~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~~~~~~ 655 (889)
++|++++.+.+++..+++..|.. ..++||||+.|+++.. .++|||||+|+|. ++.++|+||..|..|+.|.++
T Consensus 2 ~~I~~~~~~t~~~~~l~l~~~~~~~~~~pGQfv~l~~~~~--~~~rpySias~~~~~~~i~l~vk~~G~~T~~L~~l--- 76 (281)
T PRK06222 2 YKILEKEELAPNVFLMEIEAPRVAKKAKPGQFVIVRIDEK--GERIPLTIADYDREKGTITIVFQAVGKSTRKLAEL--- 76 (281)
T ss_pred cEEEEEEEecCCEEEEEEeCchhhccCCCCeEEEEEeCCC--CCceeeEeeEEcCCCCEEEEEEEeCCcHHHHHhcC---
Confidence 46788889999999999987753 5799999999999753 3679999999764 578999999999999988632
Q ss_pred ccCCCCCCCccccccccccCCCCCCccEE-EEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 656 VCQPPSVDQSGLLRADIGQADNRPRIPKL-LIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 656 ~~~~~~~~~s~~l~~~~~~g~~~~~~~~v-~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ .+ .|.||||.+.. ...++.++|||||+||||++++++++..+
T Consensus 77 -----------------~~Gd------~v~~i~GP~G~~~~-~~~~~~~llIaGGiGiaPl~~l~~~l~~~--------- 123 (281)
T PRK06222 77 -----------------KEGD------SILDVVGPLGKPSE-IEKFGTVVCVGGGVGIAPVYPIAKALKEA--------- 123 (281)
T ss_pred -----------------CCCC------EEeeEEcCCCCCcc-cCCCCeEEEEeCcCcHHHHHHHHHHHHHC---------
Confidence 2676 78 69999999753 33457899999999999999999987532
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..+++++|..|+.+++ .|.+++.+++. ++ +++.. .+.
T Consensus 124 ------------------~~~v~l~~g~r~~~d~-~~~~el~~~~~-------~~--~v~~~--d~~------------- 160 (281)
T PRK06222 124 ------------------GNKVITIIGARNKDLL-ILEDEMKAVSD-------EL--YVTTD--DGS------------- 160 (281)
T ss_pred ------------------CCeEEEEEecCCHHHh-hcHHHHHhhCC-------eE--EEEcC--CCC-------------
Confidence 2479999999999986 46666655432 11 12211 000
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhh
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 875 (889)
.| +.|+ ..+.+.+....... ...||+|||++|++.+++.+.+..
T Consensus 161 ---------~g-----~~G~--v~~~l~~~~~~~~~-~~~vy~CGP~~M~~~v~~~l~~~g 204 (281)
T PRK06222 161 ---------YG-----RKGF--VTDVLKELLESGKK-VDRVVAIGPVIMMKFVAELTKPYG 204 (281)
T ss_pred ---------cC-----cccc--hHHHHHHHhhcCCC-CcEEEEECCHHHHHHHHHHHHhcC
Confidence 01 0122 22344443322111 236999999999999999987764
|
|
| >TIGR02911 sulfite_red_B sulfite reductase, subunit B | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=208.70 Aligned_cols=207 Identities=19% Similarity=0.245 Sum_probs=147.8
Q ss_pred cEEEEEEEEecCCEEEEEEecCCCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhc
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKV 656 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~ 656 (889)
.++|+++...++++..++++.| +.++||||+.|.+|.. ..|||||++. +++.++|+||..|+.|..|.+ +
T Consensus 7 ~~~v~~~~~~t~~~~~~~~~~~--~~~~pGQ~v~l~~~~~---~~~pySi~~~-~~~~l~~~Vk~~G~~S~~L~~-l--- 76 (261)
T TIGR02911 7 KSEILEIIKHTDIEYTFRMSYD--GPVKPGQFFEVSLPKY---GEAPISVSGI-GEGYIDLTIRRVGKVTDEVFT-L--- 76 (261)
T ss_pred eEEEEEEeeccCCEEEEEcCCC--CCCCCCcEEEEEecCC---CccceecCCC-CCCeEEEEEEeCchhhHHHHc-C---
Confidence 5778888888899999999765 6799999999999864 3589999984 568899999999999988753 2
Q ss_pred cCCCCCCCccccccccccCCCCCCccEEEEeCCCCC-CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccc
Q 002711 657 CQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA-PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEG 735 (889)
Q Consensus 657 ~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~-~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~ 735 (889)
++|+ +|.|.||||. +..+....++++|||||+||||++||+++++.+..
T Consensus 77 ----------------~~Gd------~v~i~gP~G~~f~~~~~~~~~~llIAgGtGIaP~~sil~~l~~~~~-------- 126 (261)
T TIGR02911 77 ----------------KEGD------NLFLRGPYGNGFDVDNYKHKELVVVAGGTGVAPVKGVVEYFVKNPK-------- 126 (261)
T ss_pred ----------------CCCC------EEEEecCCCCCcccCccCCceEEEEecccCcHHHHHHHHHHHhCcc--------
Confidence 2677 8999999998 43222245789999999999999999999865311
Q ss_pred cccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhc
Q 002711 736 ITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHH 815 (889)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~ 815 (889)
..++++|+|++|+.+++ +|.++|.++++. ..+ +..+... +.+.
T Consensus 127 ----------------~~~~v~L~~~~r~~~~~-~~~~eL~~l~~~---~~~--~~~~~~~--~~~~------------- 169 (261)
T TIGR02911 127 ----------------EIKSLNLILGFKTPDDI-LFKEDIAEWKGN---INL--TLTLDEA--EEDY------------- 169 (261)
T ss_pred ----------------cCceEEEEEecCCHHHh-hHHHHHHHHHhc---CcE--EEEEcCC--CCCC-------------
Confidence 13689999999999986 678888887652 123 2222211 0000
Q ss_pred ccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 816 AKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 816 ~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
....|+-+ ..+.+.... +.....||+|||++|++++++.+.+...
T Consensus 170 -------------~~~~g~v~--~~l~~~~~~-~~~~~~v~lCGp~~mv~~~~~~L~~~Gv 214 (261)
T TIGR02911 170 -------------KGNIGLVT--KYIPELTLK-DIEEVQAIVVGPPIMMKFTVQELLKKGI 214 (261)
T ss_pred -------------cCCeeccC--HhHHhccCC-CccceEEEEECCHHHHHHHHHHHHHcCC
Confidence 00113322 222221111 1224579999999999999999887643
|
Members of this protein family include the B subunit, one of three subunits, of the anaerobic sulfite reductase of Salmonella, and close homologs from various Clostridum species, where the three-gene neighborhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms as seen in Clostridium pasteurianum. |
| >TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=223.78 Aligned_cols=230 Identities=17% Similarity=0.338 Sum_probs=160.3
Q ss_pred ccEEEEEEEEecCCEEEEEEecCC--CCccCCccEEEEEEcCC-----------------------------CCCcccce
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQ--GFKYTSGQYIFVNCAAV-----------------------------SQFQWHPF 624 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~--~~~~~pGQyv~l~~p~i-----------------------------s~~e~HPF 624 (889)
...+|++++.+.+++.++++..+. ++.|+||||+.|.+|.. ....+|||
T Consensus 130 ~~~~v~~~~~~s~~i~~l~l~~~~~~~~~~~pGQfv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~y 209 (405)
T TIGR01941 130 WECEVISNDNVATFIKELVLKLPDGESVPFKAGGYIQIEAPPHVVKYADFDIPPEYRGDWEKFNLFDLVSKVDEETVRAY 209 (405)
T ss_pred eeeEEEEcccccchhheEEEecCCCceeeecCCceEEEEcccccccccccccchhhhhhHhhhcchheeccCCCccceee
Confidence 356788888899999999998763 47899999999999743 12357999
Q ss_pred eeeecCCC-CceEEEEEec-----------CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCC
Q 002711 625 SITSAPGD-DYLSIHIRTL-----------GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA 692 (889)
Q Consensus 625 TIaSaP~~-~~l~l~Ir~~-----------G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~ 692 (889)
||+|+|.+ +.++|+||.. |..|..|.+ +++|+ .+.|.||||.
T Consensus 210 Sias~p~~~~~l~~~vr~~~~~~~~~~~~~G~~S~~L~~--------------------l~~Gd------~v~i~gP~G~ 263 (405)
T TIGR01941 210 SMANYPAEKGIIKLNVRIATPPFINSDIPPGIMSSYIFS--------------------LKPGD------KVTISGPFGE 263 (405)
T ss_pred cCCCCCCCCCeEEEEEEEeccCcccCCCCCCcHHHHHhc--------------------CCCcC------EEEEEeccCC
Confidence 99999965 6899999974 555555542 34787 8999999999
Q ss_pred CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHH
Q 002711 693 PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFR 772 (889)
Q Consensus 693 ~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~ 772 (889)
+... ...+.+||||||+||||++|++++++.... ..++++|+|++|+.+++ +|.
T Consensus 264 f~l~-~~~~~lvlIAgGtGIaP~lsmi~~~l~~~~------------------------~~~~v~l~~g~R~~~dl-~~~ 317 (405)
T TIGR01941 264 FFAK-DTDAEMVFIGGGAGMAPMRSHIFDQLKRLK------------------------SKRKISFWYGARSLREM-FYQ 317 (405)
T ss_pred Ceec-CCCCCEEEEecCcCcchHHHHHHHHHhcCC------------------------CCCeEEEEEecCCHHHH-hHH
Confidence 8643 345689999999999999999998764311 24679999999999886 678
Q ss_pred HHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhC-CCC
Q 002711 773 GVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKH-TDE 851 (889)
Q Consensus 773 ~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~-~~~ 851 (889)
+++.++++.. +++.++..+++... .+ ...| ..|+.. +.+........ ...
T Consensus 318 ~el~~l~~~~--~~~~~~~~~s~~~~-~~--------------------~~~g-----~~G~v~-~~l~~~~l~~~~~~~ 368 (405)
T TIGR01941 318 EDFDQLEAEN--PNFVWHVALSDPQP-ED--------------------NWTG-----YTGFIH-NVLYENYLKDHDAPE 368 (405)
T ss_pred HHHHHHHHhC--CCeEEEEEeCCCCc-cC--------------------CCCC-----ccceeC-HHHHHhhhcccCCCC
Confidence 8888776543 45777765553211 00 0011 112322 11222222111 113
Q ss_pred eEEEEEeCChhHHHHHHHHHHhhhcCCCCcEEEEeeCC
Q 002711 852 RVGVFYCGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 852 ~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~f~fh~E~F 889 (889)
...||+|||++|++.+++.+.+.+. ..=.+|.|.|
T Consensus 369 ~~~vylCGP~~m~~av~~~L~~~Gv---~~~~I~~E~F 403 (405)
T TIGR01941 369 DCEFYMCGPPMMNAAVIKMLEDLGV---ERENILLDDF 403 (405)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHcCC---CHHHEEEecc
Confidence 4579999999999999999987643 2445677776
|
This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. |
| >PRK05802 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-21 Score=210.99 Aligned_cols=150 Identities=19% Similarity=0.323 Sum_probs=121.2
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCC---CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLKS 651 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~~ 651 (889)
+..+|++++.+.+++..+++..|.. ..++|||||+|++|....+..|||||+++|. ++.++|+||..|..|+.|.+
T Consensus 65 ~~~~I~~~~~~t~dv~~l~l~~p~~~~~~~~~PGQFv~l~~~~~~~~~~rP~SI~~~~~~~g~l~l~ik~~G~~T~~L~~ 144 (320)
T PRK05802 65 YECKIIKKENIEDNLIILTLKVPHKLARDLVYPGSFVFLRNKNSSSFFDVPISIMEADTEENIIKVAIEIRGVKTKKIAK 144 (320)
T ss_pred EeEEEEEEEEecCCEEEEEEECCchhhhccCCCCceEEEEEcCCCCEeEEeeEecccCCCCCEEEEEEEecChhHHHHhc
Confidence 4578899999999999999998754 3479999999999865566789999999875 57899999999999998863
Q ss_pred HHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCC--CC-CC--CCCCEEEEEEcCcchhhHHHHHHHHHHHH
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP--AQ-DY--KDYDVLLLVGLGIGATPLISIIKDVLNNI 726 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~--~~-~~--~~~~~vllVagGiGITP~lsil~~l~~~~ 726 (889)
+ ++|+ .+.|.||||.. .. +. ...+.+|+|||||||||+++++++++.+
T Consensus 145 l--------------------~~Gd------~l~v~GP~GnG~F~l~~~~~~~~~~~llIaGGiGIaPl~~l~~~l~~~- 197 (320)
T PRK05802 145 L--------------------NKGD------EILLRGPYWNGILGLKNIKSTKNGKSLVIARGIGQAPGVPVIKKLYSN- 197 (320)
T ss_pred C--------------------CCCC------EEEEeCCCCcCcCCcccccccCCCeEEEEEeEEeHHHHHHHHHHHHHc-
Confidence 2 2677 89999999653 21 11 2346899999999999999999998643
Q ss_pred hhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHH
Q 002711 727 KQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVA 779 (889)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~ 779 (889)
..+++++|..|+.+++ ++.++++++.
T Consensus 198 --------------------------~~~v~li~g~r~~~~~-~~~~el~~~~ 223 (320)
T PRK05802 198 --------------------------GNKIIVIIDKGPFKNN-FIKEYLELYN 223 (320)
T ss_pred --------------------------CCcEEEEEeCCCHHHH-HHHHHHHHhh
Confidence 2469999999999987 5777776653
|
|
| >cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=204.70 Aligned_cols=208 Identities=15% Similarity=0.228 Sum_probs=145.5
Q ss_pred cCCEEEEEEecC--CCCccCCccEEEEEEcCCCCCcccceeeeecCCC--CceEEEEEec-----------CcchHHHHH
Q 002711 587 PGNVLALQMSKP--QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD--DYLSIHIRTL-----------GDWTSQLKS 651 (889)
Q Consensus 587 ~~~v~~l~~~~p--~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~--~~l~l~Ir~~-----------G~wT~~L~~ 651 (889)
|.+|.+|+|..| ..+.|+||||+.|.+|. ...+|||||+|.|++ +.+.|+||.. |..|..|.+
T Consensus 14 ~~~v~~l~l~~~~~~~~~~~pGQ~v~l~~~~--~~~~R~ySias~p~~~~~~l~l~Ik~~~~~~~~~~~~~G~~S~~L~~ 91 (267)
T cd06182 14 PRSTRHLEFDLSGNSVLKYQPGDHLGVIPPN--PLQPRYYSIASSPDVDPGEVHLCVRVVSYEAPAGRIRKGVCSNFLAG 91 (267)
T ss_pred CCceEEEEEecCCCCcCccCCCCEEEEecCC--CCCCeeEeecCCCCCCCCEEEEEEEEEEEecCCCCeeccchhHHHhh
Confidence 458999999988 57899999999999875 357899999999965 7899999987 666776653
Q ss_pred HHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCC-CCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhh
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG-APAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK 730 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG-~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~ 730 (889)
+++|+ .|.|.||+| .+..+-...+.+||||||+||||++|++++++....+..
T Consensus 92 --------------------lk~Gd------~v~v~~p~G~~f~l~~~~~~~~vlIAgGtGIaP~~s~l~~~~~~~~~~~ 145 (267)
T cd06182 92 --------------------LQLGA------KVTVFIRPAPSFRLPKDPTTPIIMVGPGTGIAPFRGFLQERAALRANGK 145 (267)
T ss_pred --------------------CCCCC------EEEEEEecCCcccCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhccc
Confidence 23677 899999999 665433335689999999999999999999876421110
Q ss_pred hcccccccCCCCCcCCCCCCCccceEEEEEEeCCC-CchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHH
Q 002711 731 EIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQ-GSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITM 809 (889)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~-~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~ 809 (889)
...+++|+|++|+. +++ .|.+.|.++++.. ..+.++..+++.... ..
T Consensus 146 ---------------------~~~~v~l~~g~r~~~~d~-~~~del~~~~~~~--~~~~~~~~~S~~~~~--~~------ 193 (267)
T cd06182 146 ---------------------ARGPAWLFFGCRNFASDY-LYREELQEALKDG--ALTRLDVAFSREQAE--PK------ 193 (267)
T ss_pred ---------------------cCCCEEEEEeCCCCcccc-cHHHHHHHHHhCC--CcceEEEEEccCCCC--Cc------
Confidence 24679999999999 776 5788888887632 456666665542110 00
Q ss_pred HHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChh-HHHHHHHHHHhhhc
Q 002711 810 LQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPG-LTGELRRLSQDFSR 876 (889)
Q Consensus 810 ~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~-m~~~vr~~~~~~~~ 876 (889)
+ .+. +...-+ .+.+.+... .. ..||+|||++ |++.+.+++.++..
T Consensus 194 ---------------~-~v~-~~l~~~-~~~l~~~l~---~~-~~vyvCGp~~~m~~~v~~~L~~~~~ 239 (267)
T cd06182 194 ---------------V-YVQ-DKLKEH-AEELRRLLN---EG-AHIYVCGDAKSMAKDVEDALVKIIA 239 (267)
T ss_pred ---------------e-ehH-HHHHHh-HHHHHHHHh---cC-CEEEEECCcccchHHHHHHHHHHHH
Confidence 0 000 000000 011111111 11 2799999999 99999999988853
|
CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. CYPOR has a C-terminal ferredoxin reducatase (FNR)- like FAD and NAD binding module, an FMN-binding domain, and an additional conecting domain (inserted within the FAD binding region) that orients the FNR and FMN binding domains. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria and participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-t |
| >cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=200.58 Aligned_cols=149 Identities=17% Similarity=0.245 Sum_probs=112.8
Q ss_pred CEEEEEEecC-CCCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCc-------chHHHHHHHhhccCCC
Q 002711 589 NVLALQMSKP-QGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGD-------WTSQLKSIFAKVCQPP 660 (889)
Q Consensus 589 ~v~~l~~~~p-~~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~-------wT~~L~~~~~~~~~~~ 660 (889)
++.+|++..+ ..+.|+||||+.|.++. ...+|||||+|+|.++.++|+||..++ .|..|.+.
T Consensus 17 ~v~~l~l~~~~~~~~f~pGQ~v~l~~~~--~~~~R~YSIas~p~~~~l~l~Vk~~~~~~~~~G~~S~~L~~~-------- 86 (245)
T cd06200 17 PLWRLRLTPPDAGAQWQAGDIAEIGPRH--PLPHREYSIASLPADGALELLVRQVRHADGGLGLGSGWLTRH-------- 86 (245)
T ss_pred ceEEEEEecCCCCCCccCCcEEEecCCC--CCCCcceEeccCCCCCEEEEEEEEeccCCCCCeeechhhhhC--------
Confidence 5899999887 57899999999999764 457899999999988899999998753 55555443
Q ss_pred CCCCccccccccccCCCCCCccEEEEeCCCCC-CCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccC
Q 002711 661 SVDQSGLLRADIGQADNRPRIPKLLIDGPYGA-PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITED 739 (889)
Q Consensus 661 ~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~-~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~ 739 (889)
.++|+ +|.|.||.|. +..+ .....+||||||+||||++|+++++..+
T Consensus 87 -----------~~~Gd------~v~i~gp~gg~F~~~-~~~~~~vlIAgGtGIaP~~s~l~~~~~~-------------- 134 (245)
T cd06200 87 -----------APIGA------SVALRLRENPGFHLP-DDGRPLILIGNGTGLAGLRSHLRARARA-------------- 134 (245)
T ss_pred -----------CCCCC------EEEEEecCCCcccCC-CCCCCEEEEecCcChHHHHHHHHHHHhc--------------
Confidence 23677 8999998664 4332 2346799999999999999999988643
Q ss_pred CCCCcCCCCCCCccceEEEEEEeCCCC-chhHHHHHHHHHHhhcCCCcEEEEEeee
Q 002711 740 GGATKNSKKKPFATKRAYFYWVTREQG-SFEWFRGVMNEVAEYDQDGVIELHNYCT 794 (889)
Q Consensus 740 ~~~~~~~~~~~~~~~rv~~~W~~R~~~-~~~wf~~~l~el~~~~~~~~i~l~~y~T 794 (889)
...++++++++|+.+ ++ .|.+++.++++.. ....++..++
T Consensus 135 ------------~~~~~~l~~g~r~~~~d~-~~~~el~~~~~~~--~~~~~~~~~s 175 (245)
T cd06200 135 ------------GRHRNWLLFGERQAAHDF-FCREELEAWQAAG--HLARLDLAFS 175 (245)
T ss_pred ------------cCCCeEEEEecCCccccH-hHHHHHHHHHHCC--CcceEEEEEc
Confidence 124688999999985 54 5788888876543 3444555444
|
coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD |
| >PTZ00319 NADH-cytochrome B5 reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=206.98 Aligned_cols=221 Identities=14% Similarity=0.264 Sum_probs=152.3
Q ss_pred hccccEEEEEEEEecCCEEEEEEecCC---CCccCCccEEEEEEcCCC----CCcccceeeeecCC-CCceEEEEEec--
Q 002711 573 SGYKSVRILKVAVYPGNVLALQMSKPQ---GFKYTSGQYIFVNCAAVS----QFQWHPFSITSAPG-DDYLSIHIRTL-- 642 (889)
Q Consensus 573 ~~~~~~~i~~v~~~~~~v~~l~~~~p~---~~~~~pGQyv~l~~p~is----~~e~HPFTIaSaP~-~~~l~l~Ir~~-- 642 (889)
..+..++|++++.+++++..+++..+. .+.|+||||+.|+++.-. ...+||||++|.|. ++.++|+||..
T Consensus 31 ~~~~~~~v~~~~~~s~d~~~~~~~~~~~~~~~~~~pGQfi~l~~~~~~~~~~~~~~R~YS~~s~~~~~~~i~~~Ik~~~~ 110 (300)
T PTZ00319 31 DMFQHFKLIKKTEVTHDTFIFRFALHSPTQRLGLPIGQHIVFRCDCTTPGKPETVQHSYTPISSDDEKGYVDFLIKVYFK 110 (300)
T ss_pred CceEEEEEEEEEEcCCCceEEEEECCCCcccCCCccceEEEEEEEeCCCCccceEEeeeccCCCcccCCEEEEEEEEecc
Confidence 345678899999999999999997643 267999999999997432 14689999999885 57899999986
Q ss_pred ---------CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCC---------------C
Q 002711 643 ---------GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDY---------------K 698 (889)
Q Consensus 643 ---------G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~---------------~ 698 (889)
|..|+.|. .+++|+ .|.|.||+|.+...- .
T Consensus 111 ~~~~~~~~~G~~S~~L~--------------------~l~~Gd------~v~i~gP~G~f~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PTZ00319 111 GVHPSFPNGGRLSQHLY--------------------HMKLGD------KIEMRGPVGKFEYLGNGTYTVHKGKGGLKTM 164 (300)
T ss_pred CCCCCCCCCCChhhhhh--------------------cCCCCC------EEEEEccceeeEecCCcceeecccccccccc
Confidence 66666663 234787 899999999863210 1
Q ss_pred CCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHH
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el 778 (889)
+.+.++|||||+||||++|+++.++.+.. ..++++|+|++|+.+++ .|.++|.++
T Consensus 165 ~~~~illIAgGtGIaP~~sml~~l~~~~~------------------------~~~~i~liyg~r~~~dl-~~~~eL~~~ 219 (300)
T PTZ00319 165 HVDAFAMIAGGTGITPMLQIIHAIKKNKE------------------------DRTKVFLVYANQTEDDI-LLRKELDEA 219 (300)
T ss_pred ccceEEEEecCcccCHHHHHHHHHHhCCC------------------------CCceEEEEEecCCHHHh-hHHHHHHHH
Confidence 23579999999999999999999875311 13589999999999987 466777664
Q ss_pred HhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCC-----CCeE
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHT-----DERV 853 (889)
Q Consensus 779 ~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~-----~~~v 853 (889)
++ ...+.++..+++..... ..+ +.||-+- .++++...... ..+.
T Consensus 220 ~~---~~~~~~~~~~~~~~~~~----------------------~~~-----~~G~v~~-~~l~~~~~~~~~~~~~~~~~ 268 (300)
T PTZ00319 220 AK---DPRFHVWYTLDREATPE----------------------WKY-----GTGYVDE-EMLRAHLPVPDPQNSGIKKV 268 (300)
T ss_pred hh---CCCEEEEEEECCCCCCC----------------------ccc-----ccceeCH-HHHHhhcCCccccccccCCe
Confidence 32 24577766555421100 001 1244442 23333222110 1246
Q ss_pred EEEEeCChhHHH-HHHHHHHhhh
Q 002711 854 GVFYCGAPGLTG-ELRRLSQDFS 875 (889)
Q Consensus 854 ~V~~CGP~~m~~-~vr~~~~~~~ 875 (889)
.||+|||++|++ .+++...+..
T Consensus 269 ~vyiCGp~~mv~~~~~~~L~~~G 291 (300)
T PTZ00319 269 MALMCGPPPMLQMAVKPNLEKIG 291 (300)
T ss_pred EEEEECCHHHHHHHHHHHHHHcC
Confidence 799999999998 5677776654
|
|
| >PLN03115 ferredoxin--NADP(+) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-20 Score=205.43 Aligned_cols=227 Identities=15% Similarity=0.205 Sum_probs=144.5
Q ss_pred CCEEEEEEecCCCCccCCccEEEEEEcCCC----CCcccceeeeecCC-----CCceEEEEEecCcchHHHHHHHhhccC
Q 002711 588 GNVLALQMSKPQGFKYTSGQYIFVNCAAVS----QFQWHPFSITSAPG-----DDYLSIHIRTLGDWTSQLKSIFAKVCQ 658 (889)
Q Consensus 588 ~~v~~l~~~~p~~~~~~pGQyv~l~~p~is----~~e~HPFTIaSaP~-----~~~l~l~Ir~~G~wT~~L~~~~~~~~~ 658 (889)
+++.+|++..+..+.|+||||+.|.+|... +..++||||+|+|. ++.++|+||..-.-+ ..-.
T Consensus 108 ~~v~~l~l~~~~~~~f~~GQfv~I~~~g~~~~g~p~~~R~YSIAS~p~~~~~~~~~l~L~Vk~~~y~~--------~~g~ 179 (367)
T PLN03115 108 GETWHMVFSTEGEIPYREGQSIGVIPDGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN--------DQGE 179 (367)
T ss_pred CceEEEEEcCCCCCCcCCCCEEEEEcCCcCCCCCcCceeeeecCCCCcccCCCCCEEEEEEEEEEeec--------CCCc
Confidence 489999998877899999999999987532 34578999999983 358999999740000 0000
Q ss_pred CCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCC-CCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccc
Q 002711 659 PPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQD-YKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGIT 737 (889)
Q Consensus 659 ~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~-~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~ 737 (889)
.+.|..|++|. ++++|+ .|.|.||+|.+... ......+||||||+||||++|+|++++......
T Consensus 180 ~~~G~~S~~L~-~Lk~Gd------~V~v~GP~G~~fllp~~~~~~iImIAgGTGIAP~rs~L~~~~~~~~~~-------- 244 (367)
T PLN03115 180 IVKGVCSNFLC-DLKPGA------EVKITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDD-------- 244 (367)
T ss_pred cCCeehHhhHh-hCCCcC------EEEEEeecCCceeCCcCCCCCEEEEeCCeeHHHHHHHHHHHHhhcccc--------
Confidence 01222333443 245788 89999999986422 123347999999999999999999876431100
Q ss_pred cCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhccc
Q 002711 738 EDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAK 817 (889)
Q Consensus 738 ~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~ 817 (889)
..-...++|+|++|+.+++ +|.++|+++++... .+++++..+++..+..
T Consensus 245 ------------~~~~~~v~Lf~G~R~~~dl-ly~dELe~l~~~~p-~~f~v~~a~SR~~~~~----------------- 293 (367)
T PLN03115 245 ------------YKFNGLAWLFLGVPTSSSL-LYKEEFEKMKEKAP-ENFRLDFAVSREQTNA----------------- 293 (367)
T ss_pred ------------ccCCCcEEEEEccCCHHHh-hHHHHHHHHHHhCC-CCEEEEEEEcCCCccc-----------------
Confidence 0013579999999999876 68888888766432 3677777666431110
Q ss_pred CCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcC
Q 002711 818 NGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRK 877 (889)
Q Consensus 818 ~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~ 877 (889)
.|.+..++ .+ +.+..+++.+.-+.....||+|||++|.+.|.++..++...
T Consensus 294 ------~G~kgyVq-d~--i~e~~e~l~~~l~~~~~~vYiCGp~~M~~~V~~~l~~l~~~ 344 (367)
T PLN03115 294 ------KGEKMYIQ-TR--MAEYAEELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAK 344 (367)
T ss_pred ------CCcceeeh-hH--HHHHHHHHHhhcccCCeEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 11110110 00 01111111111112245799999999999999888776543
|
|
| >cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-20 Score=198.99 Aligned_cols=212 Identities=16% Similarity=0.250 Sum_probs=146.8
Q ss_pred ccccEEEEEEEEec----CCEEEEEEecCC-------CCccCCccEEEEEEcCCCCCcccceeeeecCCCCceEEEEEe-
Q 002711 574 GYKSVRILKVAVYP----GNVLALQMSKPQ-------GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRT- 641 (889)
Q Consensus 574 ~~~~~~i~~v~~~~----~~v~~l~~~~p~-------~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~- 641 (889)
.+.++++++.+.++ .++..++|..|. ...|+||||+.|..+.. ...|||||+|+|+++.+.|+||.
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~pGQ~v~v~~~g~--~~~R~YSias~p~~g~l~l~Vk~~ 121 (289)
T cd06201 44 RTKALELVERKDYGAAVQAPTAILRFKPAKRKLSGKGLPSFEAGDLLGILPPGS--DVPRFYSLASSSSDGFLEICVRKH 121 (289)
T ss_pred CccceEEEeeeecCCCCCCccEEEEEeCCCcccccCCCCCcCccCEEEEecCCC--CCCceEecCCCCCCCeEEEEEEeC
Confidence 45678899988887 589999998775 46799999999986543 35799999999988899999997
Q ss_pred -cCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEe-CCCCCCCCCCCCCCEEEEEEcCcchhhHHHHH
Q 002711 642 -LGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLID-GPYGAPAQDYKDYDVLLLVGLGIGATPLISII 719 (889)
Q Consensus 642 -~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vd-GPYG~~~~~~~~~~~vllVagGiGITP~lsil 719 (889)
.|..|+.|.+ + ++|+ .|.+. +|+|.+..+ ...+.++|||||+||||++|++
T Consensus 122 ~~G~~S~~L~~-l-------------------~~Gd------~v~v~~~~~g~F~~~-~~~~~lvlIAgGtGIaP~~s~l 174 (289)
T cd06201 122 PGGLCSGYLHG-L-------------------KPGD------TIKAFIRPNPSFRPA-KGAAPVILIGAGTGIAPLAGFI 174 (289)
T ss_pred CCccchhhHhh-C-------------------CCcC------EEEEEeccCCCccCC-CCCCCEEEEecCcCHHHHHHHH
Confidence 4667777754 2 3677 77776 578887643 3446799999999999999999
Q ss_pred HHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccC
Q 002711 720 KDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEE 799 (889)
Q Consensus 720 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~ 799 (889)
++.. ..++++|+|++|+.++-..|.++|+++++.. ..+.++..+++....
T Consensus 175 ~~~~----------------------------~~~~v~L~~g~r~~~~d~~~~~eL~~l~~~~--~~~~~~~~~s~~~~~ 224 (289)
T cd06201 175 RANA----------------------------ARRPMHLYWGGRDPASDFLYEDELDQYLADG--RLTQLHTAFSRTPDG 224 (289)
T ss_pred Hhhh----------------------------ccCCEEEEEEecCcccchHHHHHHHHHHHcC--CCceEEEEECCCCCc
Confidence 8641 1357999999999853236888888876643 234444433321100
Q ss_pred CChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 800 GDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 800 ~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
+- + ....|-+...+ ..... ....||+|||++|++.+++.+.+...
T Consensus 225 g~---------------------v------~~~l~~~~~~l-~~~~~----~~~~vyiCGp~~M~~~v~~~L~~i~~ 269 (289)
T cd06201 225 AY---------------------V------QDRLRADAERL-RRLIE----DGAQIMVCGSRAMAQGVAAVLEEILA 269 (289)
T ss_pred cc---------------------c------hhHHHHhHHHH-HHHHH----CCcEEEEECCHHHHHHHHHHHHHHHH
Confidence 00 0 00001111111 11111 12469999999999999998887654
|
coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via F |
| >COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=192.14 Aligned_cols=204 Identities=24% Similarity=0.394 Sum_probs=149.2
Q ss_pred cEEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEe--cCcchHHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRT--LGDWTSQLKSI 652 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~--~G~wT~~L~~~ 652 (889)
..+|.+++.+++++..+.+..|.. +.++||||+.|+.|. ....||||+|+|++ +.+.++|+. .|-.|+.+...
T Consensus 9 ~~~I~~~~~is~~~~~l~~~~~~~~~~~~pGQfv~l~~~~---~~~~P~si~~~~~~~g~~~l~i~~~~~G~~T~~i~~~ 85 (252)
T COG0543 9 SYKVVEKEEISPDTFLLRLRLPFVALTFKPGQFVMLRVPG---GVRRPYSLASAPDDKGELELHIRVYEVGKVTKYIFGL 85 (252)
T ss_pred ccEEEEEEEecCceEEEEEeccccccccCCCcEEEEEeCC---CcEEEeeeccCCCcCCcEEEEEEEEeCChHHHHHhhc
Confidence 368899999999999999987654 689999999999998 48999999999974 555555554 79999998765
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhc
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEI 732 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~ 732 (889)
. +|+ .+.|.||||.+...-.....+++||||+|++|+.++++++..+.
T Consensus 86 k--------------------~gd------~i~v~GP~G~~~~~~~~~~~vlliagGtG~aPl~~i~~~~~~~~------ 133 (252)
T COG0543 86 K--------------------EGD------KIRVRGPLGNGFLREKIGKPVLLIAGGTGIAPLYAIAKELKEKG------ 133 (252)
T ss_pred c--------------------CCC------EEEEEcCCCCCccccccCCcEEEEecccCHhHHHHHHHHHHhcC------
Confidence 2 566 79999999998743323345999999999999999999987541
Q ss_pred ccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHh
Q 002711 733 EEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQS 812 (889)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~ 812 (889)
...+|+++|..|+..++ .+.+++.++.+. +++. +|.. +.
T Consensus 134 -------------------~~~~V~~~~G~~~~~dl-~~~~el~~~~~~------~~~~-~~~~---~~----------- 172 (252)
T COG0543 134 -------------------DANKVTLLYGARTAKDL-LLLDELEELAEK------EVHP-VTDD---GW----------- 172 (252)
T ss_pred -------------------CCceEEEEEeccChhhc-ccHHHHHHhhcC------cEEE-EECC---CC-----------
Confidence 14789999999999987 456666666532 3333 2321 00
Q ss_pred hhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 813 IHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 813 l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
.| ..|... .+++++.... +...||+||||.|++.+++...+...
T Consensus 173 -----------~G-----~~G~v~-~~~~~~~~~~---~~~~v~~cGp~~M~~~v~~~~~~~g~ 216 (252)
T COG0543 173 -----------KG-----RKGFVT-TDVLKELLDL---EVDDVYICGPPAMVKAVREKLKEYGV 216 (252)
T ss_pred -----------Cc-----cCccee-HHHHhhhccc---cCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 01 001110 2334443322 23479999999999999999998864
|
|
| >TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=205.17 Aligned_cols=155 Identities=12% Similarity=0.249 Sum_probs=117.1
Q ss_pred cEEEEEEEEec-----CCEEEEEEecCC-CCccCCccEEEEEEcCC----CCCcccceeeeecCCC-----CceEEEEEe
Q 002711 577 SVRILKVAVYP-----GNVLALQMSKPQ-GFKYTSGQYIFVNCAAV----SQFQWHPFSITSAPGD-----DYLSIHIRT 641 (889)
Q Consensus 577 ~~~i~~v~~~~-----~~v~~l~~~~p~-~~~~~pGQyv~l~~p~i----s~~e~HPFTIaSaP~~-----~~l~l~Ir~ 641 (889)
..+|+.++.+. ++|.+|++..+. .+.|+||||+.|.+|.. .+..++||||+|+|++ +.++|+||.
T Consensus 144 ~a~V~~~~~l~~~~~~~~v~~l~L~~~~~~~~~~pGQfv~l~~pg~~~~g~~~~~R~YSIas~~~~~~~~~~~l~l~Vk~ 223 (411)
T TIGR03224 144 TATVVGNYRLTDEDASSDIHHIVLDFGSHPFPVLEGQSIGILPPGTDASGKPHYARMYSVASPRNGERPGYNNLALTVKR 223 (411)
T ss_pred EEEEeeeEEccCCCCCCceEEEEEeCCCCcCCccCCcEEEEecCCcCcCCCcCcceeeeecCCCCccCCCCCEEEEEEEE
Confidence 46778888884 499999998765 58999999999998853 2346899999998743 469999998
Q ss_pred c----------CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCC-CCCCCCEEEEEEcCc
Q 002711 642 L----------GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQ-DYKDYDVLLLVGLGI 710 (889)
Q Consensus 642 ~----------G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~-~~~~~~~vllVagGi 710 (889)
. |-.|+.|.+ +++|+ +|.|.||||.... +-.....+||||||+
T Consensus 224 v~~~~~g~~~~G~~S~~L~~--------------------lk~Gd------~v~v~GP~G~~f~lp~~~~~~lllIagGt 277 (411)
T TIGR03224 224 VTTDHQGNAVRGVASNYLCD--------------------LKKGD------KVQVIGPFGSTFLMPNHPESSIMMICTGT 277 (411)
T ss_pred EEecCCCCcCcccchhHHhc--------------------CCCcC------EEEEEeccCCcccCCCCCCCCEEEEeccc
Confidence 6 445555543 34787 8999999998432 212235799999999
Q ss_pred chhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHh
Q 002711 711 GATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAE 780 (889)
Q Consensus 711 GITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~ 780 (889)
||||++|+++++....... ...+++|+|++|+.+++ .|.++|.++.+
T Consensus 278 GIAP~~s~l~~~~~~~~~~----------------------~~~~v~L~~G~Rt~~dl-~y~~eL~~l~~ 324 (411)
T TIGR03224 278 GSAPMRAMTERRRRRRDHG----------------------EGGKLMLFFGARTKEEL-PYFGPLQKLPK 324 (411)
T ss_pred CcHHHHHHHHHHHHHhhcC----------------------CCCCEEEEEecCccccc-hHHHHHHHHHh
Confidence 9999999999987542211 24689999999999987 46666776654
|
Members of this protein family are BoxA, the A component of the BoxAB benzoyl-CoA oxygenase/reductase. This oxygen-requiring enzyme acts in an aerobic pathway of benzoate catabolism via coenzyme A ligation. BoxA is a homodimeric iron-sulphur-flavoprotein and acts as an NADPH-dependent reductase for BoxB. |
| >PF08022 FAD_binding_8: FAD-binding domain; InterPro: IPR013112 This FAD binding domain is associated with ferric reductase NAD binding proteins and the heavy chain of Cytochrome b-245 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-22 Score=186.06 Aligned_cols=100 Identities=37% Similarity=0.818 Sum_probs=7.3
Q ss_pred ccEEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCC--CCcccceeeeecCCCCceEEEEEecCcchHHHHHH
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVS--QFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSI 652 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is--~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~ 652 (889)
.++++++++.+++++++|++++|.. ++|+||||+||++|.++ .||||||||+|+|+++.++++||..||||++|++.
T Consensus 2 ~~~~~~~v~~~~~~~v~i~i~~~~~~~~~~pGq~v~l~~p~~s~~~~q~HPFTIas~~~~~~i~l~ik~~g~~T~~L~~~ 81 (105)
T PF08022_consen 2 FNVRIASVELLPDDVVEITIPKPSSPFKWKPGQYVFLSFPSISKWFWQWHPFTIASSPEDNSITLIIKARGGWTKRLYEH 81 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEEEEEEcCCCEEEEEEECCCCCCCCCCceEEEEEEcCcCcCcccccccEeeccCCCCEEEEEEEeCCCchHHHHHH
Confidence 4678889999999999999999987 99999999999999999 56999999999999999999999999999999988
Q ss_pred HhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCC
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~ 693 (889)
+.+. .......+++.||||||++
T Consensus 82 ~~~~------------------~~~~~~~~~v~idGPYG~~ 104 (105)
T PF08022_consen 82 LSES------------------PSKQGNRLRVFIDGPYGAP 104 (105)
T ss_dssp ---------------------------------TTSTTSHH
T ss_pred Hhhh------------------cccCCCceEEEEECCCCCC
Confidence 7431 0011234589999999975
|
; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A. |
| >KOG0534 consensus NADH-cytochrome b-5 reductase [Coenzyme transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=190.44 Aligned_cols=222 Identities=16% Similarity=0.277 Sum_probs=171.6
Q ss_pred ccccEEEEEEEEecCCEEEEEEecCC---CCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchH
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQ---GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTS 647 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~l~~~~p~---~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~ 647 (889)
.|..+++.+.+.++.|+..+.|..|. .+....|||+++..|-....-.+|||-.|.+.+ +++.+.||.. |-.|+
T Consensus 50 ~~~~~~l~~k~~~shdt~~f~f~lp~~~~~l~lp~g~hv~~~~~i~g~~vvRpYTPvs~~~~~g~~~l~VK~Y~~G~mS~ 129 (286)
T KOG0534|consen 50 SYYPFRLIDKTELSHDTSLFRFVLPSADHVLGLPIGQHVVLKAPIGGKLVVRPYTPVSLDDDKGYFDLVVKVYPKGKMSQ 129 (286)
T ss_pred ceEEEEEEEEEeccCCceeEEEecCCchhccCcccceEEEEEecCCCcEEEEecCCccCccccceEEEEEEeccCCcccH
Confidence 36778889999999999888888773 377899999999999776678999999999877 7999999987 66777
Q ss_pred HHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHh
Q 002711 648 QLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIK 727 (889)
Q Consensus 648 ~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~ 727 (889)
.|.++ +.|+ .|.+.||.|....+-..++++.|||||+||||+++++++++.+..
T Consensus 130 ~l~~L--------------------kiGd------~ve~rGP~G~~~~~~~~~~~l~miAgGtGItPmlqii~~il~~~~ 183 (286)
T KOG0534|consen 130 HLDSL--------------------KIGD------TVEFRGPIGEFKYDPQKAKHLGMIAGGTGITPMLQLIRAILKDPE 183 (286)
T ss_pred HHhcC--------------------CCCC------EEEEecCccceEecCCCcceEEEEecccchhhHHHHHHHHhcCCC
Confidence 66543 3677 899999999976554458899999999999999999999976532
Q ss_pred hhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHH
Q 002711 728 QQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALI 807 (889)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~ 807 (889)
...++++++++++++++ |++++|+++++.+. ..+.++.++++..+..+
T Consensus 184 ------------------------d~tki~lly~N~te~DI-Llr~eL~~la~~~p-~rf~~~y~v~~~~~~w~------ 231 (286)
T KOG0534|consen 184 ------------------------DTTKISLLYANKTEDDI-LLREELEELASKYP-ERFKVWYVVDQPPEIWD------ 231 (286)
T ss_pred ------------------------CCcEEEEEEecCCcccc-chHHHHHHHHhhCc-ceEEEEEEEcCCccccc------
Confidence 26789999999999997 89999999998775 37888887765432111
Q ss_pred HHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHH-HHHhhhc
Q 002711 808 TMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRR-LSQDFSR 876 (889)
Q Consensus 808 ~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~-~~~~~~~ 876 (889)
..-|+++-+.+-..+....++ .+-|++||||+|++.++. ....+..
T Consensus 232 ----------------------~~~g~It~~~i~~~l~~~~~~-~~~~liCGPp~m~~~~~~~~le~Lg~ 278 (286)
T KOG0534|consen 232 ----------------------GSVGFITKDLIKEHLPPPKEG-ETLVLICGPPPMINGAAQGNLEKLGY 278 (286)
T ss_pred ----------------------CccCccCHHHHHhhCCCCCCC-CeEEEEECCHHHHhHHHHHHHHhcCC
Confidence 112566655554444444443 688999999999985444 4443443
|
|
| >PLN02252 nitrate reductase [NADPH] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=219.79 Aligned_cols=224 Identities=14% Similarity=0.237 Sum_probs=160.7
Q ss_pred hccccEEEEEEEEecCCEEEEEEecCCC---CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEec------
Q 002711 573 SGYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL------ 642 (889)
Q Consensus 573 ~~~~~~~i~~v~~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~------ 642 (889)
..+..++|++++.+++++..++|..|.. +.++||||++|.++.-.....||||++|.|+ ++++.|+||..
T Consensus 632 ~~~~~~~Lv~k~~lS~d~~~f~f~lp~~~~~lgl~pGQhV~l~~~~~g~~~~R~YSpaS~~~~~g~lel~VK~~~~~~~~ 711 (888)
T PLN02252 632 REKIPCRLVEKISLSHDVRLFRFALPSEDHVLGLPVGKHVFLCATINGKLCMRAYTPTSSDDEVGHFELVIKVYFKNVHP 711 (888)
T ss_pred CceEEEEEEEEEEccCCeEEEEEEECCCcccCCCCCCCEEEEEEecCCeEEEeeeEecccCCCCCEEEEEEEEEeccccC
Confidence 3467789999999999999999987754 5789999999998644445689999999986 47899999986
Q ss_pred -----CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCC--------C--CCCCCEEEEEE
Q 002711 643 -----GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQ--------D--YKDYDVLLLVG 707 (889)
Q Consensus 643 -----G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~--------~--~~~~~~vllVa 707 (889)
|..|+.|. .+++|+ .|.|.||+|.+.. + ....+.++|||
T Consensus 712 ~~p~gG~~S~~L~--------------------~L~vGd------~V~V~GP~G~f~y~g~G~f~l~~~~~~~~~vvmIA 765 (888)
T PLN02252 712 KFPNGGLMSQYLD--------------------SLPIGD------TIDVKGPLGHIEYAGRGSFLVNGKPKFAKKLAMLA 765 (888)
T ss_pred ccCCCCchhhHHh--------------------cCCCCC------EEEEecCccceeecccceeeeccccccCceEEEEe
Confidence 44555542 244787 8999999998521 1 11346899999
Q ss_pred cCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcE
Q 002711 708 LGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVI 787 (889)
Q Consensus 708 gGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i 787 (889)
||+||||++++|++++.+.. ..++++|+|++|+.+++ .|.++|+++++... ..+
T Consensus 766 GGsGITPi~silr~ll~~~~------------------------d~t~i~Liyg~Rt~~Di-l~~eEL~~la~~~p-~~~ 819 (888)
T PLN02252 766 GGTGITPMYQVIQAILRDPE------------------------DKTEMSLVYANRTEDDI-LLREELDRWAAEHP-DRL 819 (888)
T ss_pred cceehhHHHHHHHHHHhccC------------------------CCCcEEEEEEECCHHHh-hHHHHHHHHHHhCC-CCE
Confidence 99999999999999875411 14679999999999987 68888988876542 467
Q ss_pred EEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHH-
Q 002711 788 ELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGE- 866 (889)
Q Consensus 788 ~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~- 866 (889)
.++..+|+...++ ..| ..||.+- .++++..... .....||+|||++|++.
T Consensus 820 ~v~~vls~~~~~~----------------------w~g-----~~GrV~~-~ll~~~l~~~-~~~~~vyiCGPp~Mi~~a 870 (888)
T PLN02252 820 KVWYVVSQVKREG----------------------WKY-----SVGRVTE-AMLREHLPEG-GDETLALMCGPPPMIEFA 870 (888)
T ss_pred EEEEEecCCCcCC----------------------CCC-----cCCcCCH-HHHHHhcccC-CCCeEEEEeCCHHHHHHH
Confidence 7776555321000 011 1256552 3444443221 23467999999999995
Q ss_pred HHHHHHhhhcC
Q 002711 867 LRRLSQDFSRK 877 (889)
Q Consensus 867 vr~~~~~~~~~ 877 (889)
++..+.+...+
T Consensus 871 v~~~L~~~G~~ 881 (888)
T PLN02252 871 CQPNLEKMGYD 881 (888)
T ss_pred HHHHHHHcCCC
Confidence 77777766543
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-19 Score=171.00 Aligned_cols=141 Identities=21% Similarity=0.400 Sum_probs=123.2
Q ss_pred cccCcccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc-c
Q 002711 138 KNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-D 211 (889)
Q Consensus 138 ~~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-~ 211 (889)
.+++.++++++++.|..+| ++|.|+++||..++ |...++.++.+||..++. + .|.|+|.||+.++.... .
T Consensus 12 ~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~--~--~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 12 TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA--G--NETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred ccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC--C--CCccCHHHHHHHHHHHhcc
Confidence 4568899999999999999 79999999999987 888889999999997665 2 49999999999998854 6
Q ss_pred CChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 212 ~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...+++++.||+.||+|+||+|+.+||+.+++... .+++ ++.++.+++++|+|+||+|+|+||.+++...|
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg--e~~~------deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~ 158 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG--ERLS------DEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP 158 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc--ccCC------HHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence 67799999999999999999999999999997322 2233 67788899999999999999999999998765
|
|
| >PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-18 Score=210.70 Aligned_cols=214 Identities=14% Similarity=0.221 Sum_probs=148.4
Q ss_pred hccccEEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHH
Q 002711 573 SGYKSVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLK 650 (889)
Q Consensus 573 ~~~~~~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~ 650 (889)
..+..++|++++.+++++..+++..|.. ..++||||+.|.++... +++||||+|.|. ++.++|+||..|..|..|.
T Consensus 646 ~~~~~~~I~~~~~lt~dv~~~~l~~p~~~~~~~PGQFv~L~~~~~g--e~rP~SIas~~~~~g~i~l~Vk~vG~~T~~L~ 723 (944)
T PRK12779 646 LGQIPQTIVGKVQLAGGIVEFTVRAPMVARSAQAGQFVRVLPWEKG--ELIPLTLADWDAEKGTIDLVVQGMGTSSLEIN 723 (944)
T ss_pred ccceEEEEEEEEEecCCEEEEEEeCCCccccCCCCceEEEEeCCCC--CEEeEEccCCCCCCCEEEEEEEeeccHHHHHh
Confidence 3467789999999999999999987754 57999999999986433 679999999874 6789999999998887664
Q ss_pred HHHhhccCCCCCCCccccccccccCCCCCCccEEE-EeCCCCCCCCC--CCCCCEEEEEEcCcchhhHHHHHHHHHHHHh
Q 002711 651 SIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLL-IDGPYGAPAQD--YKDYDVLLLVGLGIGATPLISIIKDVLNNIK 727 (889)
Q Consensus 651 ~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~-vdGPYG~~~~~--~~~~~~vllVagGiGITP~lsil~~l~~~~~ 727 (889)
++ ++|+ .+. |.||+|.+... ....+.+||||||+||||++|+++.++..
T Consensus 724 ~l--------------------k~Gd------~l~~I~GPlG~~f~~~~~~~~~~vllIAGGiGIAPl~sl~r~l~~~-- 775 (944)
T PRK12779 724 RM--------------------AIGD------AFSGIAGPLGRASELHRYEGNQTVVFCAGGVGLPPVYPIMRAHLRL-- 775 (944)
T ss_pred cC--------------------CCcC------EEeeeecCCCCCcCCccccCCCcEEEEEccEeHHHHHHHHHHHHHC--
Confidence 32 2677 785 99999997421 11235899999999999999999987542
Q ss_pred hhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHH---HHHHhhcCCCcEEEEEeeeccccCCChhh
Q 002711 728 QQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVM---NEVAEYDQDGVIELHNYCTSVYEEGDARS 804 (889)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l---~el~~~~~~~~i~l~~y~T~~~~~~d~~s 804 (889)
..+|+++|++|+.+++. +.+.+ +++++... ..++++ +|.. .+.
T Consensus 776 -------------------------g~~V~li~G~Rs~edl~-~~del~~L~~la~~~~-~~~~v~--~ttd--dgs--- 821 (944)
T PRK12779 776 -------------------------GNHVTLISGFRAKEFLF-WTGDDERVGKLKAEFG-DQLDVI--YTTN--DGS--- 821 (944)
T ss_pred -------------------------CCCEEEEEEeCCHHHhh-hHHHHHHHHHHHHHcC-CCeEEE--EEec--CCC---
Confidence 24699999999998764 44444 44443322 234443 3321 010
Q ss_pred HHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCC---C-CeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 805 ALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHT---D-ERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 805 ~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~---~-~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
.| ..|+.+ +.+.++..... + ....||+|||+.|++.+.+.+.+.+.
T Consensus 822 -------------------~G-----~~G~Vt--~~l~~ll~~~~~~~~~~~~~Vy~CGP~~Mmkav~~~l~~~Gv 871 (944)
T PRK12779 822 -------------------FG-----VKGFVT--GPLEEMLKANQQGKGRTIAEVIAIGPPLMMRAVSDLTKPYGV 871 (944)
T ss_pred -------------------CC-----CccccC--hHHHHHHHhcccccccCCcEEEEECCHHHHHHHHHHHHHcCC
Confidence 01 113332 22333322221 0 12469999999999999999877643
|
|
| >PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-18 Score=208.88 Aligned_cols=200 Identities=19% Similarity=0.324 Sum_probs=145.2
Q ss_pred EEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCCCCcccceeeeecCC-CCceEEEEEecCcchHHHHHHHhh
Q 002711 578 VRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQLKSIFAK 655 (889)
Q Consensus 578 ~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~-~~~l~l~Ir~~G~wT~~L~~~~~~ 655 (889)
++|+++..+.+++..|++..|.. ..++||||+.|+++.. .++|||||+|+|. ++.++|+||..|..|..|.++
T Consensus 2 ~~I~~~~~~t~~v~~l~l~~p~~~~~~~pGQFv~l~~~~~--~~~rp~Si~~~~~~~g~i~~~vk~vG~~T~~L~~l--- 76 (752)
T PRK12778 2 NKIVEKEIFSEKVFLLEIEAPLIAKSRKPGQFVIVRVGEK--GERIPLTIADADPEKGTITLVIQEVGLSTTKLCEL--- 76 (752)
T ss_pred CEEEEEEEEcCCEEEEEEeCCchhccCCCCeeEEEEeCCC--CCeeEEEeeeeCCCCCEEEEEEEEcCchHHHHhcC---
Confidence 46788888999999999987753 5799999999999754 3679999999874 578999999999999998642
Q ss_pred ccCCCCCCCccccccccccCCCCCCccEE-EEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 656 VCQPPSVDQSGLLRADIGQADNRPRIPKL-LIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 656 ~~~~~~~~~s~~l~~~~~~g~~~~~~~~v-~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ .+ .|.||||.+... ...+.++|||||+||||++++++++..+
T Consensus 77 -----------------~~Gd------~v~~v~GP~G~~~~~-~~~~~~llvaGG~GiaPl~~l~~~l~~~--------- 123 (752)
T PRK12778 77 -----------------NEGD------YITDVVGPLGNPSEI-ENYGTVVCAGGGVGVAPMLPIVKALKAA--------- 123 (752)
T ss_pred -----------------CCCC------EeCeEeCCCCCCccC-CCCCeEEEEECCEeHHHHHHHHHHHHHC---------
Confidence 2677 78 799999998643 3457899999999999999999998643
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..+++++|+.|+.+++. |.+++.+++. .+ .+.|. .+.
T Consensus 124 ------------------~~~v~l~~g~r~~~~l~-~~~el~~~~~-----~~---~~~t~---dg~------------- 160 (752)
T PRK12778 124 ------------------GNRVITILGGRSKELII-LEDEMRESSD-----EV---IIMTD---DGS------------- 160 (752)
T ss_pred ------------------CCeEEEEeccCCHHHhh-hHHHHHhhcC-----eE---EEEEC---CCC-------------
Confidence 24799999999999874 5565655432 11 11221 010
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhh
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 875 (889)
.| +.|+ ..+++.+..... .....||+|||+.|++.+.+.+.+..
T Consensus 161 ---------~g-----~~G~--v~~~l~~~~~~~-~~~~~vy~CGP~~M~~~v~~~l~~~g 204 (752)
T PRK12778 161 ---------YG-----RKGL--VTDGLEEVIKRE-TKVDKVFAIGPAIMMKFVCLLTKKYG 204 (752)
T ss_pred ---------CC-----Cccc--HHHHHHHHhhcC-CCCCEEEEECCHHHHHHHHHHHHHcC
Confidence 01 0122 123344433221 11235999999999999999887754
|
|
| >cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=177.73 Aligned_cols=133 Identities=15% Similarity=0.140 Sum_probs=106.1
Q ss_pred EEEEEEecCCEEEEEEecCCC---CccCCccEEEEEEcCCC-------------------CCcccceeeeecC-CCCceE
Q 002711 580 ILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVS-------------------QFQWHPFSITSAP-GDDYLS 636 (889)
Q Consensus 580 i~~v~~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is-------------------~~e~HPFTIaSaP-~~~~l~ 636 (889)
|++++.+++++.+|+|+.|.. ..|.||||+.|.+|... ...+++|||++.| +++++.
T Consensus 1 V~~~~~~s~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~YSi~~~~~~~~~l~ 80 (235)
T cd06193 1 VVRVERLTPHMRRITLGGPDLAGFPSDGPDQHVKLLFPDPGQAPPVLPVLGRRRWPPEEPRPVMRTYTVRRFDPEAGELD 80 (235)
T ss_pred CceeEecCCCEEEEEEecCccccCCCCCCCceEEEEecCCCCCCCCCccccccccCCcccCCcCcccceeEEcCCCCEEE
Confidence 356778889999999988764 67899999999998643 4678999999986 578899
Q ss_pred EEEEec---CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchh
Q 002711 637 IHIRTL---GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGAT 713 (889)
Q Consensus 637 l~Ir~~---G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGIT 713 (889)
|.|+.. |..|+.|.+ +++|+ .|.|.||+|.+... ...+.+||||||+|||
T Consensus 81 ~~v~~~~~~G~~s~~l~~--------------------l~~Gd------~v~v~gP~G~~~~~-~~~~~~vlia~GtGi~ 133 (235)
T cd06193 81 IDFVLHGDEGPASRWAAS--------------------AQPGD------TLGIAGPGGSFLPP-PDADWYLLAGDETALP 133 (235)
T ss_pred EEEEeCCCCCchHHHHhh--------------------CCCCC------EEEEECCCCCCCCC-CCcceEEEEeccchHH
Confidence 999877 335555532 23687 89999999998653 2456899999999999
Q ss_pred hHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCc
Q 002711 714 PLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGS 767 (889)
Q Consensus 714 P~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~ 767 (889)
|+++|++.+.. ..++++++.+|+.++
T Consensus 134 p~~~il~~~~~----------------------------~~~~~~~~~~~~~~d 159 (235)
T cd06193 134 AIAAILEELPA----------------------------DARGTALIEVPDAAD 159 (235)
T ss_pred HHHHHHHhCCC----------------------------CCeEEEEEEECCHHH
Confidence 99999997621 257999999999854
|
Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hy |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-18 Score=171.36 Aligned_cols=148 Identities=20% Similarity=0.293 Sum_probs=126.1
Q ss_pred ccCcccHHHHHHHHHccc---CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCc-ccHHHHHHHHHHhccCC-
Q 002711 139 NVGTEGWGEVEKRFDELA---VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSS-ITKSELRGFWEQITDQS- 213 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld---~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~-Id~~EF~~~~~~~~~~~- 213 (889)
..+.+|+..|..+|.+++ ++|.++++||..+.... .+.+.++|++.++...+ |. |+|+||+..+..+....
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~-~Np~~~rI~~~f~~~~~---~~~v~F~~Fv~~ls~f~~~~~ 101 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA-LNPLADRIIDRFDTDGN---GDPVDFEEFVRLLSVFSPKAS 101 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh-cCcHHHHHHHHHhccCC---CCccCHHHHHHHHhhhcCCcc
Confidence 356789999999999999 68999999999998543 45789999997665544 44 99999999999976554
Q ss_pred hHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCC
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 214 ~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
.++|++.||++||.|+||+|+++||.+++......+... .+++.++.++.+|.++|.|+||+|+|+||.+.+.+.|.
T Consensus 102 ~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~-~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~ 178 (187)
T KOG0034|consen 102 KREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDM-SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPD 178 (187)
T ss_pred HHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcc-hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCcc
Confidence 456999999999999999999999999998654433332 67888999999999999999999999999999999884
|
|
| >PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.5e-19 Score=153.68 Aligned_cols=99 Identities=71% Similarity=1.219 Sum_probs=77.3
Q ss_pred cccccchhHHHHhccccccccccCc-ccHHHHHHHHHcccCCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCc
Q 002711 118 KVDRTKSGAARALKGLKFITKNVGT-EGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSS 196 (889)
Q Consensus 118 ~~~~~~s~~~~al~~L~~i~~~~~~-~~~~~l~~~F~~ld~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~ 196 (889)
|++|++|+|++||||||||+++.+. ++|..|+++|++|+.||.|++++|.+|+||+++++|+.+||++|.+.++...+.
T Consensus 1 rldRt~S~A~~ALkGLrFIskt~~~~~~W~~VE~RFd~La~dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~~~~ 80 (100)
T PF08414_consen 1 RLDRTKSGAQRALKGLRFISKTTGGADGWKEVEKRFDKLAKDGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIKGDS 80 (100)
T ss_dssp -----HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH-BTTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT--SSE
T ss_pred CCCcchhHHHHHHhcccceecCCCCccCHHHHHHHHHHhCcCCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccCC
Confidence 5799999999999999999998754 589999999999999999999999999999999999999999999999988899
Q ss_pred ccHHHHHHHHHHhccCChHH
Q 002711 197 ITKSELRGFWEQITDQSFDA 216 (889)
Q Consensus 197 Id~~EF~~~~~~~~~~~~ee 216 (889)
|+.+|+.++|.++.++++|.
T Consensus 81 I~k~eL~efW~qisD~sFDs 100 (100)
T PF08414_consen 81 ITKDELKEFWEQISDQSFDS 100 (100)
T ss_dssp E-HHHHHHHHHHHH---HHH
T ss_pred cCHHHHHHHHHHhhccCCCC
Confidence 99999999999999988763
|
It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A. |
| >PTZ00306 NADH-dependent fumarate reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-17 Score=207.37 Aligned_cols=223 Identities=16% Similarity=0.197 Sum_probs=155.7
Q ss_pred ccccEEEEEEE---EecCCEEEEEEecCCC---CccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec-Ccc
Q 002711 574 GYKSVRILKVA---VYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL-GDW 645 (889)
Q Consensus 574 ~~~~~~i~~v~---~~~~~v~~l~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~-G~w 645 (889)
.|.++++.+++ .++.++..++|..|.. +.+.|||||.|+++.-..-.+++||++|.|++ +.+.|+||.. |..
T Consensus 913 ~w~~~~l~~~~~~~~~~~~~~~~~f~lp~~~~~~~~~pGQfv~l~~~~~g~~~~R~YS~~S~p~~~~~i~l~Vr~~~G~~ 992 (1167)
T PTZ00306 913 KWTTVVVREVREGGQFGTGSRVLRFNLPGALQRSGLTLGQFIAIRGDWDGQQLIGYYSPITLPDDLGVISILARGDKGTL 992 (1167)
T ss_pred ceEEEEEEEEeccccccCCeEEEEEECCCcccccCCCCCeEEEEEeeeCCeEEEEEeccCCCCCCCCeEEEEEEcCCChh
Confidence 56678888876 4577888888877653 57999999999986433235799999999965 6799999874 678
Q ss_pred hHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC----------CCCCCCCEEEEEEcCcchhhH
Q 002711 646 TSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA----------QDYKDYDVLLLVGLGIGATPL 715 (889)
Q Consensus 646 T~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~----------~~~~~~~~vllVagGiGITP~ 715 (889)
|..|.+ + ++|+ .|.|.||+|... .+-...+.++|||||+||||+
T Consensus 993 S~~L~~-l-------------------~~Gd------~v~v~gp~G~~~~~~p~~~~f~~~~~~~~~ivlIAGGtGItP~ 1046 (1167)
T PTZ00306 993 KEWISA-L-------------------RPGD------SVEMKACGGLRIERRPADKQFVFRGHVIRKLALIAGGTGVAPM 1046 (1167)
T ss_pred HHHHhh-C-------------------CCCC------EEEEeCCcCccccccCccceeeeccCCCceEEEEECCccHhHH
Confidence 887743 2 3677 899999998421 111234689999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeec
Q 002711 716 ISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTS 795 (889)
Q Consensus 716 lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~ 795 (889)
+||+++++.+... ...++++|+|++|+.+++ +|.++|.++++... +.+.++..+++
T Consensus 1047 ~sml~~~l~~~~~----------------------~~~~~i~Llyg~r~~~dl-~~~~eL~~l~~~~~-~~f~~~~~ls~ 1102 (1167)
T PTZ00306 1047 LQIIRAALKKPYV----------------------DSIESIRLIYAAEDVSEL-TYRELLESYRKENP-GKFKCHFVLNN 1102 (1167)
T ss_pred HHHHHHHHhCccc----------------------CCCceEEEEEEeCCHHHh-hHHHHHHHHHHHCC-CCEEEEEEECC
Confidence 9999998754110 014689999999999997 68888888876432 35777765553
Q ss_pred cccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhh
Q 002711 796 VYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 796 ~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 875 (889)
..+ . .. -..||.+- .++++.... +.....||+|||++|++.+++.+.+..
T Consensus 1103 ~~~-~----------------------w~-----~~~G~i~~-~~l~~~l~~-~~~~~~vyiCGP~~mv~~v~~~L~~~G 1152 (1167)
T PTZ00306 1103 PPE-G----------------------WT-----DGVGFVDR-ALLQSALQP-PSKDLLVAICGPPVMQRAVKADLLALG 1152 (1167)
T ss_pred CCc-c----------------------cC-----CCCCCCCH-HHHHHhcCC-CCCCeEEEEeCCHHHHHHHHHHHHHcC
Confidence 210 0 00 11245432 233333221 223467999999999999999988765
Q ss_pred c
Q 002711 876 R 876 (889)
Q Consensus 876 ~ 876 (889)
.
T Consensus 1153 ~ 1153 (1167)
T PTZ00306 1153 Y 1153 (1167)
T ss_pred C
Confidence 4
|
|
| >PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=198.35 Aligned_cols=201 Identities=14% Similarity=0.257 Sum_probs=143.9
Q ss_pred EEEEEEEEecCCEEEEEEecCC-CCccCCccEEEEEEcCCCCCcccceeeeecC-CCCceEEEEEecCcchHHHHHHHhh
Q 002711 578 VRILKVAVYPGNVLALQMSKPQ-GFKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSIHIRTLGDWTSQLKSIFAK 655 (889)
Q Consensus 578 ~~i~~v~~~~~~v~~l~~~~p~-~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP-~~~~l~l~Ir~~G~wT~~L~~~~~~ 655 (889)
.+|++...+.+++..+++..|. ...++|||||.|+++.. .+.+||||++.+ +++.++|+|+..|..|+.|...+
T Consensus 2 ~~I~~~~~l~~~~~~l~l~ap~~a~~~~PGQFV~l~~~~~--~errplSIa~~~~~~g~i~l~vk~vG~~T~~L~~~l-- 77 (1006)
T PRK12775 2 YSIVRREAFSDTTFLWEVEAPDVAASAEPGHFVMLRLYEG--AERIPLTVADFDRKKGTITMVVQALGKTTREMMTKF-- 77 (1006)
T ss_pred cEEEEEEEecCCEEEEEEecCCcccCCCCCeeEEEEeCCC--CeeEEEEecCcCCCCCEEEEEEEecCcHHHHHHhcC--
Confidence 3577888899999999998876 46799999999999753 367999999876 45789999999999999986433
Q ss_pred ccCCCCCCCccccccccccCCCCCCccEE-EEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhccc
Q 002711 656 VCQPPSVDQSGLLRADIGQADNRPRIPKL-LIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEE 734 (889)
Q Consensus 656 ~~~~~~~~~s~~l~~~~~~g~~~~~~~~v-~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~ 734 (889)
++|+ .+ .+.||+|.+.. ...++++|||||||||||++|+++.+...
T Consensus 78 -----------------k~Gd------~l~~v~GPlG~~~~-~~~~~~vllVaGGiGIAPl~s~~r~l~~~--------- 124 (1006)
T PRK12775 78 -----------------KAGD------TFEDFVGPLGLPQH-IDKAGHVVLVGGGLGVAPVYPQLRAFKEA--------- 124 (1006)
T ss_pred -----------------CCCC------EEeeeecCCCCCCC-CCCCCeEEEEEEhHHHHHHHHHHHHHHhC---------
Confidence 2677 67 69999999753 33457899999999999999999987532
Q ss_pred ccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhh
Q 002711 735 GITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIH 814 (889)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~ 814 (889)
..+++++|+.|+.+.+ .+.++|.++.. .+ +++.. .+.
T Consensus 125 ------------------g~~v~li~g~R~~~~l-~~~del~~~~~-----~~----~v~td--dgs------------- 161 (1006)
T PRK12775 125 ------------------GARTTGIIGFRNKDLV-FWEDKFGKYCD-----DL----IVCTD--DGS------------- 161 (1006)
T ss_pred ------------------CCcEEEEEeCCChHHc-ccHHHHHhhcC-----cE----EEEEC--CCC-------------
Confidence 2469999999999875 45555544321 12 22211 000
Q ss_pred cccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 815 HAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 815 ~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
.| +.|+ ..+.+.++..... .-.||+|||+.|++.+.+.++++..
T Consensus 162 ---------~G-----~~G~--vt~~l~~~l~~~~--~d~vy~CGP~~Mm~av~~~~~~~gi 205 (1006)
T PRK12775 162 ---------YG-----KPGF--VTAALKEVCEKDK--PDLVVAIGPLPMMNACVETTRPFGV 205 (1006)
T ss_pred ---------CC-----CCCC--hHHHHHHHhccCC--CCEEEEECCHHHHHHHHHHHHHCCC
Confidence 00 0122 2234444332211 1259999999999999999887654
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-16 Score=154.43 Aligned_cols=137 Identities=19% Similarity=0.300 Sum_probs=111.4
Q ss_pred CcccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCC--
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQS-- 213 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~-- 213 (889)
+.++..++++.|+.+| ++|.|+.+||..++ |..+++.....+++. .|.+++|.|+++||+..+.......
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~---~D~dg~g~I~~~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKE---IDLDGDGTIDFEEFLDLMEKLGEEKTD 79 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH---hCCCCCCeEcHHHHHHHHHhhhccccc
Confidence 4566788999999999 89999999999987 666666666666663 4444469999999999987753322
Q ss_pred ---hHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 214 ---FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 214 ---~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..+.++.+|+.||+|+||+||.+||+.+|...... ++ ++.++.|++++|.|+||.|+|+||.+||..
T Consensus 80 ~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~--~~------~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 80 EEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK--LT------DEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc--CC------HHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 35699999999999999999999999999754332 22 566788999999999999999999999964
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.9e-16 Score=155.78 Aligned_cols=149 Identities=19% Similarity=0.240 Sum_probs=123.6
Q ss_pred cCcccHHHHHHHHHcccCCCccchhhhccccc----CCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChH
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Ls~~ef~~~lg----~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
-+..++....+-|..-..+|.++.++|.+.+. ...++.+++.+|..+|.+.+ |.|+|.||+.+++.+.++..+
T Consensus 23 f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~d---g~i~F~Efi~als~~~rGt~e 99 (193)
T KOG0044|consen 23 FSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKD---GTIDFLEFICALSLTSRGTLE 99 (193)
T ss_pred CCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCC---CCcCHHHHHHHHHHHcCCcHH
Confidence 35567777777787644899999999999873 34567899999997655444 999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcc---cchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCC
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASAN---KLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 216 e~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~---~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
++++.+|++||.|+||+||++|+-++++...... ..+..++..++.++.+|+++|.|+||.||++||....+..|+
T Consensus 100 ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~ 178 (193)
T KOG0044|consen 100 EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS 178 (193)
T ss_pred HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence 9999999999999999999999999998532221 122334556888999999999999999999999999988774
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=139.42 Aligned_cols=140 Identities=16% Similarity=0.321 Sum_probs=113.2
Q ss_pred ccccCcccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh-c
Q 002711 137 TKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI-T 210 (889)
Q Consensus 137 ~~~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~-~ 210 (889)
+.+++.++++.+++.|+.+| ++|.|+.+||..++ +.......+..+|..++.. ++|.|+|+||+.++... .
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~---~~g~i~~~ef~~~l~~~~~ 78 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD---GNGTIDFPEFLTLMARKMK 78 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcC---CCCcCcHHHHHHHHHHhcc
Confidence 45567788899999999999 89999999999876 4455666778888854433 34999999999998764 3
Q ss_pred cCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHH
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 211 ~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
....++.++.+|+.||+|++|+|+.+|+..++.... ..++ ++.++.+++.+|.|++|.|+|+||..+|.
T Consensus 79 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~--~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 79 DTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLG--EKLT------DEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred CCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC--CCCC------HHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 455678899999999999999999999999997432 1222 44566799999999999999999999875
|
|
| >cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-14 Score=162.59 Aligned_cols=204 Identities=13% Similarity=0.165 Sum_probs=120.7
Q ss_pred cCCccEEEEEEcCCCCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCC
Q 002711 603 YTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPR 680 (889)
Q Consensus 603 ~~pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~ 680 (889)
...||++-+. |. .+.+||||+|+|. ++.+.+.|+..-.-|.. . .....|..|+++. ++.+|+
T Consensus 147 ~~~~~~l~~~-p~---l~~R~YSIaSsp~~~~~~i~l~v~v~~~~~~~-~------~~~~~G~~S~~L~-~l~~Gd---- 210 (384)
T cd06206 147 LPLATFLAML-PP---MRPRQYSISSSPLVDPGHATLTVSVLDAPALS-G------QGRYRGVASSYLS-SLRPGD---- 210 (384)
T ss_pred CCHHHHHHhC-cc---cCCcceeeccCccCCCCeEEEEEEEEEeecCC-C------CceeeeehHHHHh-hCCCCC----
Confidence 3468888775 54 3789999999985 35566666542100000 0 0001222333332 234676
Q ss_pred ccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEE
Q 002711 681 IPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYW 760 (889)
Q Consensus 681 ~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W 760 (889)
.+.+.+.||+|.+..+......+||||||+||||++|++++........ ....++.|+|
T Consensus 211 ~v~v~i~~p~g~F~l~~~~~~piImIa~GtGIAP~~s~l~~~~~~~~~~---------------------~~~~~v~L~~ 269 (384)
T cd06206 211 SIHVSVRPSHSAFRPPSDPSTPLIMIAAGTGLAPFRGFLQERAALLAQG---------------------RKLAPALLFF 269 (384)
T ss_pred eEEEEEecCCCccCCCCCCCCCEEEEeCCCCcHHHHHHHHHHHHHHhcC---------------------CCcCCEEEEE
Confidence 2234467999998644334568999999999999999999876542211 0135799999
Q ss_pred EeCCC-CchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHH
Q 002711 761 VTREQ-GSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRT 839 (889)
Q Consensus 761 ~~R~~-~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~ 839 (889)
++|+. .++ .|.+++.++++. +.++++..+++..+. ... -+. +.=+-+.+.
T Consensus 270 G~R~~~~d~-ly~~el~~~~~~---~~~~l~~a~Sr~~~~-~~~------------------yVq------~~i~~~~~~ 320 (384)
T cd06206 270 GCRHPDHDD-LYRDELEEWEAA---GVVSVRRAYSRPPGG-GCR------------------YVQ------DRLWAEREE 320 (384)
T ss_pred eCCCCCccc-chHHHHHHHHHC---CCeEEEEEecccCCC-CCE------------------ech------hhHHhhHHH
Confidence 99998 565 688888888762 456766655532110 000 000 000001112
Q ss_pred HHHHHHhhCCCCeEEEEEeCChhHHHHHHHHHHhhhcC
Q 002711 840 VFKHVAVKHTDERVGVFYCGAPGLTGELRRLSQDFSRK 877 (889)
Q Consensus 840 v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~ 877 (889)
+.+.+ . +...||+|||++|+++|++.+.+...+
T Consensus 321 ~~~~~-~----~~~~vyiCGp~~M~~~v~~~L~~i~~~ 353 (384)
T cd06206 321 VWELW-E----QGARVYVCGDGRMAPGVREVLKRIYAE 353 (384)
T ss_pred HHHHH-H----CCcEEEEECCCchHHHHHHHHHHHHHH
Confidence 22111 1 234699999999999999998877644
|
NADPH cytochrome p450 reductase serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a la |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.7e-14 Score=140.54 Aligned_cols=141 Identities=13% Similarity=0.237 Sum_probs=114.5
Q ss_pred ccCcccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh-ccC
Q 002711 139 NVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI-TDQ 212 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~-~~~ 212 (889)
+.+.++..++++.|..+| ++|.|+.+||..++ |.......+..+|..++. + ++|.|+++||+.++... ...
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~-~--~~g~i~~~eF~~~~~~~~~~~ 86 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDK-D--GSGKIDFEEFLDIMTKKLGER 86 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCC-C--CCCcEeHHHHHHHHHHHhcCC
Confidence 356677889999999999 89999999998877 455566778888885443 3 34999999999987664 345
Q ss_pred ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 213 ~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..++.++.+|+.+|+|++|.|+.+||..++.... ..++ ++.++.+|..+|.|++|.|+|+||..+|...|
T Consensus 87 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~--~~l~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 156 (158)
T PTZ00183 87 DPREEILKAFRLFDDDKTGKISLKNLKRVAKELG--ETIT------DEELQEMIDEADRNGDGEISEEEFYRIMKKTN 156 (158)
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCCC------HHHHHHHHHHhCCCCCCcCcHHHHHHHHhccc
Confidence 5678899999999999999999999999986432 1233 44567799999999999999999999998877
|
|
| >cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.8e-14 Score=159.10 Aligned_cols=191 Identities=13% Similarity=0.176 Sum_probs=121.2
Q ss_pred CCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCC
Q 002711 618 QFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQ 695 (889)
Q Consensus 618 ~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~ 695 (889)
+.+.+||||+|+|. ++.++++|+.....|..- ..+.|..|++|. ++.+|+ +|.|.||+|.+..
T Consensus 161 ~l~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--------~~~~G~~S~~L~-~l~~Gd------~v~v~~p~g~F~l 225 (382)
T cd06207 161 LIKPRYYSISSSPLKNPNEVHLLVSLVSWKTPSG--------RSRYGLCSSYLA-GLKVGQ------RVTVFIKKSSFKL 225 (382)
T ss_pred CCCCceeeecCCCcCCCCeEEEEEEEEEeeCCCC--------CeecccHHHHHh-hcCCCC------EEEEEEECCcccC
Confidence 45889999999996 478999999874333100 012344455554 355777 8999999998754
Q ss_pred CCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCC-CchhHHHHH
Q 002711 696 DYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQ-GSFEWFRGV 774 (889)
Q Consensus 696 ~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~-~~~~wf~~~ 774 (889)
+-.....+||||||+|||||+|++++.....++.. ...++.|+|++|+. .++ .|.++
T Consensus 226 p~~~~~plImIa~GtGIAP~rs~l~~~~~~~~~~~---------------------~~~~~~L~~G~R~~~~d~-~y~~e 283 (382)
T cd06207 226 PKDPKKPIIMVGPGTGLAPFRAFLQERAALLAQGP---------------------EIGPVLLYFGCRHEDKDY-LYKEE 283 (382)
T ss_pred CCCCCCCEEEEcCCccHHHHHHHHHHHHHHhhcCc---------------------cCCCEEEEECCCCCCccc-cHHHH
Confidence 33334579999999999999999998764322110 25689999999998 664 68888
Q ss_pred HHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEE
Q 002711 775 MNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVG 854 (889)
Q Consensus 775 l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~ 854 (889)
+.++++.. ..++++...++... ... ..| +..+-+.+.+.+.+. .+...
T Consensus 284 l~~~~~~~--~~~~~~~a~Srd~~--~~~-----yVq-------------------~~l~~~~~~~~~~l~----~~~~~ 331 (382)
T cd06207 284 LEEYEKSG--VLTTLGTAFSRDQP--KKV-----YVQ-------------------DLIRENSDLVYQLLE----EGAGV 331 (382)
T ss_pred HHHHHhCC--CCceEEEEecCCCC--Cce-----EhH-------------------HHHHHCHHHHHHHHh----cCCCE
Confidence 88876532 34555554443110 000 000 000111122222221 12246
Q ss_pred EEEeCChh-HHHHHHHHHHhhhcC
Q 002711 855 VFYCGAPG-LTGELRRLSQDFSRK 877 (889)
Q Consensus 855 V~~CGP~~-m~~~vr~~~~~~~~~ 877 (889)
||+|||+. |+++|++.+.+...+
T Consensus 332 vYvCG~~~~M~~~V~~~L~~~~~~ 355 (382)
T cd06207 332 IYVCGSTWKMPPDVQEAFEEILKK 355 (382)
T ss_pred EEEECCcccccHHHHHHHHHHHHH
Confidence 99999998 999999998877543
|
CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced fe |
| >cd06199 SiR Cytochrome p450- like alpha subunits of E | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.4e-14 Score=158.50 Aligned_cols=200 Identities=13% Similarity=0.155 Sum_probs=124.1
Q ss_pred CCccCCccEEEEEEcCCCCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCC
Q 002711 600 GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADN 677 (889)
Q Consensus 600 ~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~ 677 (889)
..++.||||+-+..| .+.++|||+|+|. ++.+.++|+..-.-|.. ..+.|..|++|....++|+
T Consensus 129 ~~~~~~gq~l~l~~~----~~~R~YSIaSsp~~~~~~i~l~v~~v~~~~~~---------~~~~G~~S~~L~~~~~~Gd- 194 (360)
T cd06199 129 PARLTAEELLDLLRP----LQPRLYSIASSPKAVPDEVHLTVAVVRYESHG---------RERKGVASTFLADRLKEGD- 194 (360)
T ss_pred CCCCCHHHHHHhCcC----CCCcceeeccCcccCCCeEEEEEEEeeecCCC---------CccceehhHHHHhcCCCCC-
Confidence 357889999988643 3679999999996 36899999865111100 0123444555543334676
Q ss_pred CCCccEEEEeCCC-CCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceE
Q 002711 678 RPRIPKLLIDGPY-GAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRA 756 (889)
Q Consensus 678 ~~~~~~v~vdGPY-G~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv 756 (889)
+|.|.||. |.+..+-.....+||||+|+||||++|++++.+... ...++
T Consensus 195 -----~v~v~~~~~~~F~lp~~~~~piImIa~GtGIAP~~s~l~~~~~~~-------------------------~~~~~ 244 (360)
T cd06199 195 -----TVPVFVQPNPHFRLPEDPDAPIIMVGPGTGIAPFRAFLQEREATG-------------------------AKGKN 244 (360)
T ss_pred -----EEEEEEecCCCcCCCCCCCCCEEEEecCcChHHHHHHHHHHHhcc-------------------------CCCcE
Confidence 78888744 556543333468999999999999999999875431 13568
Q ss_pred EEEEEeCCC-CchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCC
Q 002711 757 YFYWVTREQ-GSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARP 835 (889)
Q Consensus 757 ~~~W~~R~~-~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRP 835 (889)
.++|++|+. .++ .|.++++++++.. ..+.++...++... ... ..|... +-
T Consensus 245 ~L~~G~R~~~~D~-~y~~el~~~~~~~--~~~~~~~a~Sr~~~--~~~-----yVq~~l-------------------~~ 295 (360)
T cd06199 245 WLFFGERHFATDF-LYQDELQQWLKDG--VLTRLDTAFSRDQA--EKV-----YVQDRM-------------------RE 295 (360)
T ss_pred EEEEcCCCCccch-hHHHHHHHHHHcC--CCeEEEEEEccCCC--CCc-----cHHHHH-------------------HH
Confidence 999999997 465 6888888876542 34555554443210 000 000000 00
Q ss_pred CHHHHHHHHHhhCCCCeEEEEEeCCh-hHHHHHHHHHHhhhcC
Q 002711 836 NWRTVFKHVAVKHTDERVGVFYCGAP-GLTGELRRLSQDFSRK 877 (889)
Q Consensus 836 d~~~v~~~~~~~~~~~~v~V~~CGP~-~m~~~vr~~~~~~~~~ 877 (889)
+..++.. +.. +...||+|||+ .|.++|++++.+...+
T Consensus 296 ~~~~~~~-~~~----~~~~vYvCG~~~~M~~~V~~~L~~i~~~ 333 (360)
T cd06199 296 QGAELWA-WLE----EGAHFYVCGDAKRMAKDVDAALLDIIAT 333 (360)
T ss_pred hHHHHHH-HHh----CCCEEEEECCCccccHHHHHHHHHHHHH
Confidence 0111111 111 12469999999 8999999988776543
|
coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=131.24 Aligned_cols=139 Identities=17% Similarity=0.298 Sum_probs=110.3
Q ss_pred cCcccHHHHHHHHHccc--CCCccchhhhccc---ccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHH-hccCC
Q 002711 140 VGTEGWGEVEKRFDELA--VDGMLPKSSFGQC---IGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQ-ITDQS 213 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~---lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~~~~ 213 (889)
+..+.-.+++..|+.++ ++|+|+.+||.-+ +|....+. ++-.++.+.|..+.|.|+|++|+..+.. +....
T Consensus 27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~---ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d 103 (172)
T KOG0028|consen 27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKE---EILKLLADVDKEGSGKITFEDFRRVMTVKLGERD 103 (172)
T ss_pred ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchH---HHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence 34455567888888888 8999999999544 46655544 4444455666556799999999998765 67777
Q ss_pred hHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 214 ~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
+.+.++.+|+.+|.|++|.|+..+|+.+++..... +. ++....|++|+|.|+||.|+-+||..+|++.
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen--lt------D~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN--LT------DEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc--cc------HHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 99999999999999999999999999999754321 22 5566779999999999999999999999763
|
|
| >TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=163.26 Aligned_cols=136 Identities=12% Similarity=0.171 Sum_probs=92.6
Q ss_pred CccCCccEEEEEEcCCCCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCC
Q 002711 601 FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNR 678 (889)
Q Consensus 601 ~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~ 678 (889)
+++.||||+-+..| .+.+||||+|+|. ++.+.++|+.+---+. -..+.|..|++|...+++|+
T Consensus 367 ~~~~~gq~v~ll~~----~~~R~YSIaSsp~~~~~~l~ltV~~v~~~~~---------~~~~~G~~S~~L~~~l~~Gd-- 431 (597)
T TIGR01931 367 ADLDAEQLISLLRP----LTPRLYSISSSQSEVGDEVHLTVGVVRYQAH---------GRARLGGASGFLAERLKEGD-- 431 (597)
T ss_pred CCCCHHHHHHhCcc----cCCceeeeccCcccCCCEEEEEEEEEEecCC---------CCccccchhHHHHhhCCCCC--
Confidence 57889999988865 3789999999995 5689999986510000 00122333344433344677
Q ss_pred CCccEEEEeCCCC-CCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEE
Q 002711 679 PRIPKLLIDGPYG-APAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAY 757 (889)
Q Consensus 679 ~~~~~v~vdGPYG-~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~ 757 (889)
+|.|.||.| .+..+-.....+||||+|+|||||+|+++++.... ...++.
T Consensus 432 ----~v~v~~~~~~~F~lp~~~~~piImIg~GTGIAPfrsflq~r~~~~-------------------------~~g~~~ 482 (597)
T TIGR01931 432 ----TVPVYIEPNDNFRLPEDPDTPIIMIGPGTGVAPFRAFMQERAEDG-------------------------AKGKNW 482 (597)
T ss_pred ----EEEEEEeeCCcccCCCCCCCCEEEEcCCcCchhHHHHHHHHHHcc-------------------------CCCCEE
Confidence 788887554 55433233457999999999999999999875431 135789
Q ss_pred EEEEeCC-CCchhHHHHHHHHHHhh
Q 002711 758 FYWVTRE-QGSFEWFRGVMNEVAEY 781 (889)
Q Consensus 758 ~~W~~R~-~~~~~wf~~~l~el~~~ 781 (889)
|+|++|+ ..++ .|.++|.++.+.
T Consensus 483 LffG~R~~~~D~-ly~~El~~~~~~ 506 (597)
T TIGR01931 483 LFFGNPHFTTDF-LYQVEWQNYLKK 506 (597)
T ss_pred EEECCCCCCcch-hHHHHHHHHHHc
Confidence 9999998 5565 477877766543
|
This model describes an NADPH-dependent sulfite reductase flavoprotein subunit. Most members of this family are found in Cys biosynthesis gene clusters. The closest homologs below the trusted cutoff are designated as subunits nitrate reductase. |
| >PF01794 Ferric_reduct: Ferric reductase like transmembrane component; InterPro: IPR013130 This family includes a common region in the transmembrane proteins mammalian cytochrome b-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from Arabidopsis thaliana | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-13 Score=129.13 Aligned_cols=120 Identities=24% Similarity=0.371 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHhhhhh-hhhccccccCCceecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCcccccCccC
Q 002711 381 TLKFNMALILLPVCRNT-ITWLRSRTKLGQVVPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKP 459 (889)
Q Consensus 381 ~l~~n~~lill~~~Rn~-l~~Lr~~t~l~~~~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~~l~~ 459 (889)
....|+++++++++||+ +.++++ +|+|+.+.+|||+|+++++.+++|++.|+...+.. ....
T Consensus 4 ~a~~~l~~~~~l~~R~~~l~~~~~-------~~~~~~~~~Hr~lg~~~~~~~~~H~~~~~~~~~~~----~~~~------ 66 (125)
T PF01794_consen 4 LAFALLPLVFLLGLRNSPLARLTG-------ISFDRLLRFHRWLGRLAFFLALLHGVLYLINWLRF----GGWD------ 66 (125)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhc------
Confidence 34577888888889974 566666 89999999999999999999999999998762210 0000
Q ss_pred ccCCCCCCcccccccccchhHHHHHHHHHHHHHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHH
Q 002711 460 FFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLF 533 (889)
Q Consensus 460 ~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll 533 (889)
.+..++.........+|++++++|++++++|.+++|||+ .||.|+++|++++++++++
T Consensus 67 -----~~~~~~~~~~~~~~~~G~~a~~~l~~l~~tS~~~~R~r~-----------~ye~f~~~H~~~~~~~~l~ 124 (125)
T PF01794_consen 67 -----WQEWFNAWLTGPYNLTGIIALLLLLILAVTSFPWIRRRR-----------NYEIFYYLHILFYIAFLLA 124 (125)
T ss_pred -----hhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------cHHHHHHHHHHHHHHHHHH
Confidence 001111222334457899999999999999999999553 7999999999998887654
|
This may be a family of flavocytochromes capable of moving electrons across the plasma membrane [] that include a potential FAD binding domain. Mutations in the sequence of cytochrome b-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterised by the absence of a functional plasma membrane associated NADPH oxidase [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0016021 integral to membrane |
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.9e-13 Score=122.15 Aligned_cols=145 Identities=19% Similarity=0.315 Sum_probs=115.9
Q ss_pred CcccHHHHHHHHHccc-------CC------CccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 002711 141 GTEGWGEVEKRFDELA-------VD------GMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWE 207 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld-------~d------G~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~ 207 (889)
+..+|-+|.++|..++ -. -+++.+.+.+.-.+++ +++-+++.+++. .|+ .|.++|++|+.+.+
T Consensus 23 trKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELke-npfk~ri~e~FS-eDG--~GnlsfddFlDmfS 98 (189)
T KOG0038|consen 23 TRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKE-NPFKRRICEVFS-EDG--RGNLSFDDFLDMFS 98 (189)
T ss_pred cHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhc-ChHHHHHHHHhc-cCC--CCcccHHHHHHHHH
Confidence 4478889999999987 11 2455666666555554 467888888654 444 39999999999999
Q ss_pred HhccCCh-HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHH
Q 002711 208 QITDQSF-DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 208 ~~~~~~~-ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
.++...+ +-++..||+.||-|+|++|..++|...+.... .+.++ .++++.+++.+++|+|.|+||++++.||+.|+
T Consensus 99 V~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lT-r~eLs--~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 99 VFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLT-RDELS--DEEVELICEKVIEEADLDGDGKLSFAEFEHVI 175 (189)
T ss_pred HHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHh-hccCC--HHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 9887655 56899999999999999999999999987433 23344 46678889999999999999999999999999
Q ss_pred HhCCCc
Q 002711 287 LQAPSQ 292 (889)
Q Consensus 287 ~~~p~~ 292 (889)
.+.|..
T Consensus 176 ~raPDF 181 (189)
T KOG0038|consen 176 LRAPDF 181 (189)
T ss_pred HhCcch
Confidence 999954
|
|
| >cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.9e-12 Score=143.25 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=91.9
Q ss_pred CCcccceeeeecCCC--CceEEEEEec-----CcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeC-C
Q 002711 618 QFQWHPFSITSAPGD--DYLSIHIRTL-----GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDG-P 689 (889)
Q Consensus 618 ~~e~HPFTIaSaP~~--~~l~l~Ir~~-----G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdG-P 689 (889)
+.+.|+|||+|+|.. +.++++|+.. |-.|..|.++.... ..+|+ .|.+.| |
T Consensus 171 ~~~~R~YSIsSsp~~~~~~i~l~v~~v~~~~~G~~S~~L~~l~~~~---------------~~~G~------~v~i~~~~ 229 (398)
T cd06203 171 RLQPRPYSIASSPLEGPGKLRFIFSVVEFPAKGLCTSWLESLCLSA---------------SSHGV------KVPFYLRS 229 (398)
T ss_pred cCCCcceeecCCcccCCCeEEEEEEEEEecCCChhhHHHHHhhhhh---------------cCCCC------EEEEEEec
Confidence 358899999999964 7899998875 55677776654210 01355 788888 6
Q ss_pred CCCCCCCCC-CCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCC-Cc
Q 002711 690 YGAPAQDYK-DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQ-GS 767 (889)
Q Consensus 690 YG~~~~~~~-~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~-~~ 767 (889)
.|.+..+.. ....+||||+|+|||||+|++++......+.. .....++.|+|++|+. .+
T Consensus 230 ~g~F~lp~~~~~~piImIa~GtGIAP~rs~lq~~~~~~~~~~-------------------~~~~~~~~Lf~G~R~~~~d 290 (398)
T cd06203 230 SSRFRLPPDDLRRPIIMVGPGTGVAPFLGFLQHREKLKESHT-------------------ETVFGEAWLFFGCRHRDRD 290 (398)
T ss_pred CCCcCCCCcCCCCCEEEEcCCcChHHHHHHHHHHHHHHhhcc-------------------cCCCCCEEEEEeCCCCCcc
Confidence 777654333 34579999999999999999998765321100 0124679999999998 56
Q ss_pred hhHHHHHHHHHHhhcCCCcEEEEEeeec
Q 002711 768 FEWFRGVMNEVAEYDQDGVIELHNYCTS 795 (889)
Q Consensus 768 ~~wf~~~l~el~~~~~~~~i~l~~y~T~ 795 (889)
+ .|.+++.++++.. ....++...++
T Consensus 291 ~-~y~~El~~~~~~~--~~~~~~~a~SR 315 (398)
T cd06203 291 Y-LFRDELEEFLEEG--ILTRLIVAFSR 315 (398)
T ss_pred h-hHHHHHHHHHHcC--CCceEEEEECC
Confidence 5 5788888877642 23445544443
|
In MSR, electrons are transferred from NADPH to FAD to FMN to cob(II)alamin. MSR resembles proteins of the cytochrome p450 family including nitric oxide synthase, the alpha subunit of sulfite reductase, but contains an extended hinge region. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. CYPORs resemble ferredoxin reductase (FNR) but have a connecting subdomain inserted within the flavin binding region, which helps orient the FMN binding doamin with the FNR module. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme |
| >PRK06214 sulfite reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=144.26 Aligned_cols=137 Identities=14% Similarity=0.199 Sum_probs=86.3
Q ss_pred CCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCC
Q 002711 617 SQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 617 s~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~ 694 (889)
.+.+.|||||+|+|. ++.++|+|+....-+. ...+.|..|+++...+++|+ .+.+.+.+|+| +.
T Consensus 312 p~l~pR~YSISSsP~~~~~~i~ltV~~V~~~~~---------~~~~~G~~S~~L~~~l~~Gd----~V~v~i~~~~g-F~ 377 (530)
T PRK06214 312 DPLQPRLYSISSSPKATPGRVSLTVDAVRYEIG---------SRLRLGVASTFLGERLAPGT----RVRVYVQKAHG-FA 377 (530)
T ss_pred CCCCcEEEEeccCCcCCCCEEEEEEEEEeeccC---------CccccchhhHHHHhcCCCCC----EEEEEecCCCC-Cc
Confidence 346899999999995 4789999986511010 00123334444444445666 23444466777 54
Q ss_pred CCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHH
Q 002711 695 QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGV 774 (889)
Q Consensus 695 ~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~ 774 (889)
.+......+||||+|+|||||+|+|++..... ...+++|+|++|....-..|.++
T Consensus 378 lp~~~~~PiImIg~GTGIAPfrsfLq~r~~~~-------------------------~~g~~~LffG~R~~~~D~ly~dE 432 (530)
T PRK06214 378 LPADPNTPIIMVGPGTGIAPFRAFLHERAATK-------------------------APGRNWLFFGHQRSATDFFYEDE 432 (530)
T ss_pred cCCCCCCCEEEEcCCeeHHHHHHHHHHHHHhc-------------------------CCCCeEEEEEecCChhhhHHHHH
Confidence 33333457999999999999999999865321 13568999999765432368888
Q ss_pred HHHHHhhcCCCcEEEEEeee
Q 002711 775 MNEVAEYDQDGVIELHNYCT 794 (889)
Q Consensus 775 l~el~~~~~~~~i~l~~y~T 794 (889)
|+++.+.. ....++...+
T Consensus 433 L~~l~~~g--~l~~l~~afS 450 (530)
T PRK06214 433 LNGLKAAG--VLTRLSLAWS 450 (530)
T ss_pred HHHHHHhC--CceEEEEEEe
Confidence 88877642 2334444444
|
|
| >cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=140.81 Aligned_cols=194 Identities=17% Similarity=0.246 Sum_probs=113.7
Q ss_pred CCcccceeeeecCC--CCceEEEEEec-----------CcchHHHHHHHhhccC--CCCC-CCccccccccccCCCCCCc
Q 002711 618 QFQWHPFSITSAPG--DDYLSIHIRTL-----------GDWTSQLKSIFAKVCQ--PPSV-DQSGLLRADIGQADNRPRI 681 (889)
Q Consensus 618 ~~e~HPFTIaSaP~--~~~l~l~Ir~~-----------G~wT~~L~~~~~~~~~--~~~~-~~s~~l~~~~~~g~~~~~~ 681 (889)
+.+.++|||+|+|. .+.+++.|+.. |-.|..|.+....... .+.. -.++. .+..+|+
T Consensus 175 ~~~pR~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~G~~S~~L~~~~~~~~~~~~~~~~~~~~~--~~~~~g~----- 247 (416)
T cd06204 175 RLQPRYYSISSSSKVHPNRIHITAVVVKYPTPTGRIIKGVATNWLLALKPALNGEKPPTPYYLSGP--RKKGGGS----- 247 (416)
T ss_pred cCCCcceeeccCccCCCCEEEEEEEEEEeeCCCCCEEeeeehHHHHhhhhhhcccccccccccccc--cccCCCC-----
Confidence 45899999999995 46788877754 4445555543311000 0000 00000 0001344
Q ss_pred cEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEE
Q 002711 682 PKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWV 761 (889)
Q Consensus 682 ~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~ 761 (889)
.|.+.+|.|.+..+......+||||||+||||++|++++......+. ....++.|+|+
T Consensus 248 -~v~v~~~~g~F~lp~~~~~piImIa~GtGIAP~~s~l~~~~~~~~~~---------------------~~~~~v~L~~G 305 (416)
T cd06204 248 -KVPVFVRRSNFRLPTKPSTPVIMIGPGTGVAPFRGFIQERAALKESG---------------------KKVGPTLLFFG 305 (416)
T ss_pred -eEEEEEecCCCCCCCCCCCCEEEEeCCcchHHHHHHHHHHHHHhhcc---------------------CccCCEEEEEc
Confidence 67888888887543333468999999999999999999875432211 01357999999
Q ss_pred eCCC-CchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCC--CHH
Q 002711 762 TREQ-GSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARP--NWR 838 (889)
Q Consensus 762 ~R~~-~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRP--d~~ 838 (889)
+|+. .++ .|.+++.++++.. ..+.++...++..+ ... ..| +|- +..
T Consensus 306 ~R~~~~d~-ly~~el~~~~~~~--~~~~l~~a~Sr~~~--~k~-----yVq---------------------~~i~~~~~ 354 (416)
T cd06204 306 CRHPDEDF-IYKDELEEYAKLG--GLLELVTAFSREQP--KKV-----YVQ---------------------HRLAEHAE 354 (416)
T ss_pred CCCCCccc-chHHHHHHHHHcC--CceEEEEEECcCCC--CCc-----chH---------------------HHHHHhHH
Confidence 9998 565 5788888876532 34666554443210 000 000 000 111
Q ss_pred HHHHHHHhhCCCCeEEEEEeCChh-HHHHHHHHHHhhhc
Q 002711 839 TVFKHVAVKHTDERVGVFYCGAPG-LTGELRRLSQDFSR 876 (889)
Q Consensus 839 ~v~~~~~~~~~~~~v~V~~CGP~~-m~~~vr~~~~~~~~ 876 (889)
.+.+.+ . +...||+|||+. |+++|++...+...
T Consensus 355 ~~~~~l-~----~~~~vYvCGp~~~M~~~V~~~L~~i~~ 388 (416)
T cd06204 355 QVWELI-N----EGAYIYVCGDAKNMARDVEKTLLEILA 388 (416)
T ss_pred HHHHHH-H----cCCEEEEECCcccchHHHHHHHHHHHH
Confidence 222211 1 124699999998 99999998877654
|
CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredo |
| >COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=125.83 Aligned_cols=218 Identities=17% Similarity=0.382 Sum_probs=145.8
Q ss_pred EEEEEEecCC--CCccCCccEEEEEEcCCC----CC----c---------------------ccceeeeecCCC-CceEE
Q 002711 590 VLALQMSKPQ--GFKYTSGQYIFVNCAAVS----QF----Q---------------------WHPFSITSAPGD-DYLSI 637 (889)
Q Consensus 590 v~~l~~~~p~--~~~~~pGQyv~l~~p~is----~~----e---------------------~HPFTIaSaP~~-~~l~l 637 (889)
+-+|.+..|. ...++||-|+.|.+|.-. -| | .+.||++|-|++ ..+.|
T Consensus 149 IKEL~laip~g~~vpFraGGyiQie~pph~v~y~Dfdi~~eY~~DWdkf~lf~~vs~v~e~~~rAYSmAsYPeE~giI~~ 228 (410)
T COG2871 149 IKELKLAIPEGEEVPFRAGGYIQIEAPPHTVNYKDFDIPPEYHEDWDKFNLFRYVSKVDEPIIRAYSMASYPEEKGIIKL 228 (410)
T ss_pred hhhheeeCCCCCccccCCCceEEEecCCccccccccCCChhHhcchhhhchheeeccccHHHHHHhhhhcChhhcCeEEE
Confidence 3456666554 478999999999998521 01 1 235777888865 45666
Q ss_pred EEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhhHHH
Q 002711 638 HIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLIS 717 (889)
Q Consensus 638 ~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP~ls 717 (889)
-||..-.=- .....|.|.+|.+.. .+++|+ +|.|.||||.+... .....+|+++||.|.+|+.|
T Consensus 229 NvRIAtPPp--------~~~~~PpG~mSSyi~-sLKpGD------KvtisGPfGEfFaK-dtdaemvFigGGAGmapmRS 292 (410)
T COG2871 229 NVRIATPPP--------RNPDAPPGQMSSYIW-SLKPGD------KVTISGPFGEFFAK-DTDAEMVFIGGGAGMAPMRS 292 (410)
T ss_pred EEEeccCCC--------CCCCCCccceeeeEE-eecCCC------eEEEeccchhhhhc-cCCCceEEEecCcCcCchHH
Confidence 677541100 011235677787776 356888 99999999997521 12346889999999999999
Q ss_pred HHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccc
Q 002711 718 IIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVY 797 (889)
Q Consensus 718 il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~ 797 (889)
.+-|++.+.+ ..|++.|.+..|+..+. .+.+..++++... +++..|+-++...
T Consensus 293 HIfDqL~rlh------------------------SkRkis~WYGARS~rE~-fY~Ed~d~L~ae~--pNF~wH~aLSdpl 345 (410)
T COG2871 293 HIFDQLKRLH------------------------SKRKISFWYGARSLREM-FYQEDFDQLQAEN--PNFHWHLALSDPL 345 (410)
T ss_pred HHHHHHHhhc------------------------ccceeeeeeccchHHHh-HHHHHHHHHHhhC--CCcEEEEEecCCC
Confidence 9999887743 36899999999999875 5777788776654 5788888776543
Q ss_pred cCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCC-CCeEEEEEeCChhHHHHHHHHHHhhhc
Q 002711 798 EEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHT-DERVGVFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 798 ~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~-~~~v~V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
.+.. .+|..--+| ..+.....+.|+ .++...|+||||-|...|-++..++..
T Consensus 346 pEDn---------------------W~g~TgFih------nv~~en~Lk~h~aPEDceyYmCGPp~mNasvikmL~dlGV 398 (410)
T COG2871 346 PEDN---------------------WDGYTGFIH------NVLYENYLKDHEAPEDCEYYMCGPPLMNASVIKMLKDLGV 398 (410)
T ss_pred CcCC---------------------cccchhHHH------HHHHhhhhhcCCCchheeEEeeCcchhhHHHHHHHHhcCc
Confidence 3221 111100011 112222233343 367899999999999999999998864
Q ss_pred C
Q 002711 877 K 877 (889)
Q Consensus 877 ~ 877 (889)
.
T Consensus 399 E 399 (410)
T COG2871 399 E 399 (410)
T ss_pred c
Confidence 3
|
|
| >cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.7e-11 Score=140.37 Aligned_cols=196 Identities=12% Similarity=0.136 Sum_probs=110.0
Q ss_pred CcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCC-CCCC
Q 002711 619 FQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG-APAQ 695 (889)
Q Consensus 619 ~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG-~~~~ 695 (889)
.+.+||||+|+|. ++.+.+.|+.....|..-. ...+.|..|++| .++++|+ .|.|.+|.| .+..
T Consensus 175 l~pR~YSIsSsp~~~~~~~~l~v~vv~~~~~~~~------~~~~~G~~S~~L-~~l~~Gd------~v~v~~~~~~~F~l 241 (406)
T cd06202 175 LQPRYYSISSSPDMYPGEIHLTVAVVSYRTRDGQ------GPVHHGVCSTWL-NGLTPGD------TVPCFVRSAPSFHL 241 (406)
T ss_pred cCCcccccCCCccCCCCeEEEEEEEEEEECCCCC------CCcccccHHHHH-HhCCCCC------EEEEEEeeCCccCC
Confidence 4889999999995 4677777766411110000 000123344444 2345676 677765433 3433
Q ss_pred CCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCC-CchhHHHHH
Q 002711 696 DYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQ-GSFEWFRGV 774 (889)
Q Consensus 696 ~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~-~~~~wf~~~ 774 (889)
+-.....+||||+|+|||||+|+|++.....++... ......++.|++++|+. .++ .|.++
T Consensus 242 p~~~~~piImIa~GTGIAPfrsflq~r~~~~~~~~~-----------------~~~~~g~v~L~~G~R~~~~d~-ly~~E 303 (406)
T cd06202 242 PEDPSVPVIMVGPGTGIAPFRSFWQQRQYDLRMSED-----------------PGKKFGDMTLFFGCRNSTIDD-IYKEE 303 (406)
T ss_pred CCCCCCCEEEEcCCcChHHHHHHHHHHHHHhhhccc-----------------ccCCCCCEEEEEcCCCCCccc-chHHH
Confidence 222335799999999999999999986543210000 00124689999999999 554 57888
Q ss_pred HHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEE
Q 002711 775 MNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVG 854 (889)
Q Consensus 775 l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~ 854 (889)
+.++.+.. ...+++...++... .... ..|+. + +-+.+.+.+.+.. +...
T Consensus 304 l~~~~~~~--~~~~~~~a~SR~~~--~~k~----yVq~~--------------l-----~~~~~~v~~~l~~----~~~~ 352 (406)
T cd06202 304 TEEAKNKG--VLTEVYTALSREPG--KPKT----YVQDL--------------L-----KEQAESVYDALVR----EGGH 352 (406)
T ss_pred HHHHHHcC--CCceEEEEEcCCCC--CCCe----ehhhH--------------H-----HHhHHHHHHHHHh----CCCE
Confidence 88776532 34455555554210 0000 00000 0 0001122111111 2347
Q ss_pred EEEeCChhHHHHHHHHHHhhhc
Q 002711 855 VFYCGAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 855 V~~CGP~~m~~~vr~~~~~~~~ 876 (889)
||+|||+.|+++|+++..+...
T Consensus 353 iYvCG~~~M~~~V~~~L~~i~~ 374 (406)
T cd06202 353 IYVCGDVTMAEDVSQTIQRILA 374 (406)
T ss_pred EEEeCCCchHHHHHHHHHHHHH
Confidence 9999999999999998776653
|
The reductase portion is similar in structure to NADPH dependent cytochrome-450 reductase (CYPOR), having an inserted connecting sub-domain within the FAD binding portion of FNR. NOS differs from CYPOR in a requirement for the cofactor tetrahydrobiopterin and unlike most CYPOR is dimeric. Nitric oxide synthase produces nitric oxide in the conversion of L-arginine to L-citruline. NOS has been implicated in a variety of processes including cytotoxicity, anti-inflamation, neurotransmission, and vascular smooth muscle relaxation. |
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-11 Score=115.79 Aligned_cols=133 Identities=13% Similarity=0.270 Sum_probs=112.0
Q ss_pred CcccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHH-HhccCCh
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWE-QITDQSF 214 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~-~~~~~~~ 214 (889)
.+..|.++++.|..+| +||.|++++++..+ |...++++++.++. .- +|.|+|.-|+...- .++..++
T Consensus 27 ~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~----Ea---~gPINft~FLTmfGekL~gtdp 99 (171)
T KOG0031|consen 27 DQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMK----EA---PGPINFTVFLTMFGEKLNGTDP 99 (171)
T ss_pred hHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHH----hC---CCCeeHHHHHHHHHHHhcCCCH
Confidence 4578999999999999 89999999998876 66666666666665 22 39999999998874 4677788
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++-+..||++||.+++|.|..+.|+++|.. .+.+.+ ++.++.|++++-.|..|.|+|.+|..+|..
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt--~gDr~~------~eEV~~m~r~~p~d~~G~~dy~~~~~~ith 165 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTT--MGDRFT------DEEVDEMYREAPIDKKGNFDYKAFTYIITH 165 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHH--hcccCC------HHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence 999999999999999999999999999964 233344 566788999999999999999999999984
|
|
| >PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=114.55 Aligned_cols=107 Identities=18% Similarity=0.399 Sum_probs=71.0
Q ss_pred EEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHHHHHHHhhcCC
Q 002711 705 LVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAEYDQD 784 (889)
Q Consensus 705 lVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~l~el~~~~~~ 784 (889)
|||||+||||++|++++++.+ . ..++++|+|++|+.+++ .|.+++.++++....
T Consensus 1 lIagGtGIaP~~s~l~~~~~~-~------------------------~~~~v~l~~~~r~~~~~-~~~~~l~~~~~~~~~ 54 (109)
T PF00175_consen 1 LIAGGTGIAPFLSMLRYLLER-N------------------------DNRKVTLFYGARTPEDL-LFRDELEALAQEYPN 54 (109)
T ss_dssp EEEEGGGGHHHHHHHHHHHHH-T------------------------CTSEEEEEEEESSGGGS-TTHHHHHHHHHHSTT
T ss_pred CeecceeHHHHHHHHHHHHHh-C------------------------CCCCEEEEEEEcccccc-cchhHHHHHHhhccc
Confidence 799999999999999999876 1 25889999999999987 688889888876543
Q ss_pred CcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHH-HHHHh-hCCCCeEEEEEeCChh
Q 002711 785 GVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVF-KHVAV-KHTDERVGVFYCGAPG 862 (889)
Q Consensus 785 ~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~-~~~~~-~~~~~~v~V~~CGP~~ 862 (889)
.+.+ +.+...+.++ ..+.|| +.+.+ ++... ........||+|||++
T Consensus 55 -~~~~--~~~~~~~~~~---------------------------~~~~g~--v~~~~~~~~~~~~~~~~~~~v~iCGp~~ 102 (109)
T PF00175_consen 55 -RFHV--VYVSSPDDGW---------------------------DGFKGR--VTDLLLEDLLPEKIDPDDTHVYICGPPP 102 (109)
T ss_dssp -CEEE--EEETTTTSST---------------------------TSEESS--HHHHHHHHHHHHHHCTTTEEEEEEEEHH
T ss_pred -cccc--cccccccccc---------------------------CCceee--hhHHHHHhhcccccCCCCCEEEEECCHH
Confidence 3333 2221111000 011122 22333 33322 2223467899999999
Q ss_pred HHHHHHH
Q 002711 863 LTGELRR 869 (889)
Q Consensus 863 m~~~vr~ 869 (889)
|++++++
T Consensus 103 m~~~v~~ 109 (109)
T PF00175_consen 103 MMKAVRK 109 (109)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999875
|
Chloroplast ferredoxin-NADP+ reductase (1.18.1.2 from EC) may play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. It is involved in the final step in the linear photosynthetic electron transport chain and has also been implicated in cyclic electron flow around photosystem I where its role would be to return electrons from ferredoxin to the cytochrome B-F complex. This domain is present in a variety of proteins that include, bacterial flavohemoprotein, mammalian NADH-cytochrome b5 reductase, eukaryotic NADPH-cytochrome P450 reductase, nitrate reductase from plants, nitric-oxide synthase, bacterial vanillate demethylase, as well as others.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1UMK_A 1CNE_A 2CND_A 1CNF_A 4FK8_A 4F7D_A 2XNJ_B 1FDR_A 1JB9_A 3LVB_A .... |
| >PRK10953 cysJ sulfite reductase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6e-11 Score=141.19 Aligned_cols=135 Identities=10% Similarity=0.140 Sum_probs=92.8
Q ss_pred ccCCccEEEEEEcCCCCCcccceeeeecCCC--CceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCC
Q 002711 602 KYTSGQYIFVNCAAVSQFQWHPFSITSAPGD--DYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRP 679 (889)
Q Consensus 602 ~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~--~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~ 679 (889)
++.||||+-+..| .+.+||||+|+|.. +.+.+.|+.+--.+. -..+.|..|+++....++|+
T Consensus 371 ~~~~~q~l~ll~~----l~pR~YSIaSsp~~~~~~v~ltv~~v~~~~~---------g~~~~G~~S~~L~~~l~~Gd--- 434 (600)
T PRK10953 371 QLDAEQLIGLLRP----LTPRLYSIASSQAEVENEVHITVGVVRYDIE---------GRARAGGASSFLADRLEEEG--- 434 (600)
T ss_pred CCCHHHHHHhCCC----CCCeeeecccCCCCCCCeEEEEEEEEEeecC---------CCCcCceEhhhhhhcCCCCC---
Confidence 5789999888755 36899999999953 566666544310000 00133445566655556777
Q ss_pred CccEEEEeCCCC-CCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEE
Q 002711 680 RIPKLLIDGPYG-APAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYF 758 (889)
Q Consensus 680 ~~~~v~vdGPYG-~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~ 758 (889)
+|.|.||.| .+..+......+||||+|+|||||++++++..... ...++.|
T Consensus 435 ---~v~v~~~~~~~F~lp~~~~~piImIg~GTGIAPfrsflq~r~~~~-------------------------~~~~~~L 486 (600)
T PRK10953 435 ---EVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADG-------------------------APGKNWL 486 (600)
T ss_pred ---EEEEEeccCCcccCCCCCCCCEEEEecCcCcHHHHHHHHHHHHcC-------------------------CCCCeEE
Confidence 799998876 45433333458999999999999999999865431 1357899
Q ss_pred EEEeCC-CCchhHHHHHHHHHHhh
Q 002711 759 YWVTRE-QGSFEWFRGVMNEVAEY 781 (889)
Q Consensus 759 ~W~~R~-~~~~~wf~~~l~el~~~ 781 (889)
+|++|+ ..++ .|++++.++.+.
T Consensus 487 ffG~R~~~~D~-lY~~El~~~~~~ 509 (600)
T PRK10953 487 FFGNPHFTEDF-LYQVEWQRYVKE 509 (600)
T ss_pred EeeccCCccch-hHHHHHHHHHHc
Confidence 999998 4554 688888877654
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.7e-10 Score=97.01 Aligned_cols=66 Identities=26% Similarity=0.372 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHH
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
+++.+|+.+|+|+||+|+.+||+.++...... ..++..++.++.+|+.+|+|+||.|+|+||..+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRD----MSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH----STHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccc----ccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 58899999999999999999999999753321 1145667888999999999999999999999876
|
... |
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.9e-10 Score=122.97 Aligned_cols=130 Identities=24% Similarity=0.328 Sum_probs=108.1
Q ss_pred HHHHHHHHccc--CCCccchhhhcccc---cC-CCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHH
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCI---GM-NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLE 219 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~-~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~ 219 (889)
.+++.+|+.+| ++|.++..++.+++ +. ++....+..+|..++.+++ |.+||+||..++. ..|.++.
T Consensus 14 ~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~d---g~vDy~eF~~Y~~-----~~E~~l~ 85 (463)
T KOG0036|consen 14 IRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRD---GRVDYSEFKRYLD-----NKELELY 85 (463)
T ss_pred HHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcC---CcccHHHHHHHHH-----HhHHHHH
Confidence 47899999999 89999999999665 33 2556678888886655544 9999999999985 4577899
Q ss_pred HHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCC
Q 002711 220 TFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 220 ~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
.+|+-.|.|+||.|+.+|+.+.++... ..++ ++.++.+|+.+|+|+++.|+++||...++-+|.
T Consensus 86 ~~F~~iD~~hdG~i~~~Ei~~~l~~~g--i~l~------de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~ 149 (463)
T KOG0036|consen 86 RIFQSIDLEHDGKIDPNEIWRYLKDLG--IQLS------DEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPE 149 (463)
T ss_pred HHHhhhccccCCccCHHHHHHHHHHhC--CccC------HHHHHHHHHHhccCCCeeeccHHHHhhhhcCCh
Confidence 999999999999999999999987432 3344 556777999999999999999999999999883
|
|
| >PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=4e-10 Score=102.88 Aligned_cols=90 Identities=23% Similarity=0.485 Sum_probs=74.0
Q ss_pred EEEEEEEEecCCEEEEEEecCC---CCccCCccEEEEEEcCCCCCcccceeeeecCCC-CceEEEEEec--CcchHHHHH
Q 002711 578 VRILKVAVYPGNVLALQMSKPQ---GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTL--GDWTSQLKS 651 (889)
Q Consensus 578 ~~i~~v~~~~~~v~~l~~~~p~---~~~~~pGQyv~l~~p~is~~e~HPFTIaSaP~~-~~l~l~Ir~~--G~wT~~L~~ 651 (889)
++|++++.+.+++..++|..|. .+.+.||||+.|+++.-....++||||+|.|.+ +.+.|+||.. |..|+.|.+
T Consensus 2 ~~v~~~~~~s~~~~~~~~~~~~~~~~~~~~pGQ~v~v~~~~~~~~~~R~yS~~s~~~~~~~~~~~ik~~~~G~~S~~L~~ 81 (99)
T PF00970_consen 2 AKVVEIEELSPDVKIFRFKLPDPDQKLDFKPGQFVSVRVPINGKQVSRPYSPASSPDDKGYLEFAIKRYPNGRVSRYLHQ 81 (99)
T ss_dssp EEEEEEEEESSSEEEEEEEESSTTTT-SSTTT-EEEEEEEETTEEEEEEEEBCSSTTSSSEEEEEEEECTTSHHHHHHHT
T ss_pred EEEEEEEEeCCCeEEEEEEECCCCcccccCcceEEEEEEccCCcceecceeEeeecCCCCcEEEEEEeccCCHHHHHHHh
Confidence 5788999999999999998763 367999999999999444467999999999975 5899999999 778888854
Q ss_pred HHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCC
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~ 693 (889)
+ ++|+ .|.|.||+|.+
T Consensus 82 -l-------------------~~Gd------~v~i~gP~G~f 97 (99)
T PF00970_consen 82 -L-------------------KPGD------EVEIRGPYGNF 97 (99)
T ss_dssp -S-------------------CTTS------EEEEEEEESSE
T ss_pred -C-------------------CCCC------EEEEEEccccc
Confidence 2 3677 89999999986
|
To date, the 3D-structures of the flavoprotein domain of Zea mays (Maize) nitrate reductase [] and of pig NADH:cytochrome b5 reductase [] have been solved. The overall fold is similar to that of ferredoxin:NADP+ reductase []: the FAD-binding domain (N-terminal) has the topology of an anti-parallel beta-barrel, while the NAD(P)-binding domain (C-terminal) has the topology of a classical pyridine dinucleotide-binding fold (i.e. a central parallel beta-sheet flanked by 2 helices on each side).; PDB: 1JB9_A 3LVB_A 3LO8_A 1FRN_A 1FND_A 1BX1_A 1FNC_A 1FNB_A 1BX0_A 1FRQ_A .... |
| >KOG3378 consensus Globins and related hemoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.9e-10 Score=113.80 Aligned_cols=129 Identities=20% Similarity=0.230 Sum_probs=92.6
Q ss_pred hccccEEEEEEEEecCCEEEEEEecCC----CCccCCccEEEEEEc--CCCC--CcccceeeeecCCCCceEEEEEecCc
Q 002711 573 SGYKSVRILKVAVYPGNVLALQMSKPQ----GFKYTSGQYIFVNCA--AVSQ--FQWHPFSITSAPGDDYLSIHIRTLGD 644 (889)
Q Consensus 573 ~~~~~~~i~~v~~~~~~v~~l~~~~p~----~~~~~pGQyv~l~~p--~is~--~e~HPFTIaSaP~~~~l~l~Ir~~G~ 644 (889)
.++..++|......++||..+.+.+-. .....|||||-++-. ..+- ..-..+|..++...+.+.+.+|...+
T Consensus 147 ~G~~~F~vT~~~~~sSDv~~~~~~PK~~~~~~~~~~PGQYvsV~~~~~~~~~k~~~~~~~S~~~~t~rN~~R~sVr~~A~ 226 (385)
T KOG3378|consen 147 DGEVEFKVTELINESSDVKSVYLGPKDPAFRISHAHPGQYVSVLWEIPGLSHKTLREYSLSNRVDTCRNQFRISVRRVAG 226 (385)
T ss_pred CCccceeeeeeeccccceeEEEecCCCcceeeccCCCCceEEEeecCCccchhHHHHHHHhhhhhhhccceeEEEeehhc
Confidence 355678888888888999999986422 245789999999863 3321 11223455555556889999987722
Q ss_pred chHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCC---CCCCCEEEEEEcCcchhhHHHHHHH
Q 002711 645 WTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQD---YKDYDVLLLVGLGIGATPLISIIKD 721 (889)
Q Consensus 645 wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~---~~~~~~vllVagGiGITP~lsil~~ 721 (889)
|-.|++++.+.+.|+ .|.+..|-|.+... ......++|.+|||||||+++|+..
T Consensus 227 -----------------G~VS~~~H~~~KVGD------~v~~S~PAG~F~~~r~~~~~N~PL~~~a~GiGiTPLi~iiE~ 283 (385)
T KOG3378|consen 227 -----------------GVVSNFVHDNLKVGD------IVGVSPPAGNFVYKRSEENVNRPLLCFAGGIGITPLIPIIET 283 (385)
T ss_pred -----------------hhhHHHhhccccccc------eeeccCCCccceeehhhhccCCceEEecCCcCccccHHHHHH
Confidence 334556777778898 89999999998632 2234679999999999999999987
Q ss_pred HHH
Q 002711 722 VLN 724 (889)
Q Consensus 722 l~~ 724 (889)
.+.
T Consensus 284 ~~~ 286 (385)
T KOG3378|consen 284 ALL 286 (385)
T ss_pred HHh
Confidence 653
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.3e-09 Score=106.61 Aligned_cols=126 Identities=17% Similarity=0.314 Sum_probs=103.4
Q ss_pred HHHHHHHHccc--CCCccchhhhcccccC----CCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHH
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCIGM----NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLE 219 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Ls~~ef~~~lg~----~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~ 219 (889)
..+...|.+.| ..|.|+-+|+.++|.. .-+.+.+.-|..+++ .+. +|+|+++||.+.|..+. .-+
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd-~~~--~G~i~f~EF~~Lw~~i~------~Wr 127 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFD-RDN--SGTIGFKEFKALWKYIN------QWR 127 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhc-CCC--CCccCHHHHHHHHHHHH------HHH
Confidence 56888999999 8999999999999842 124566777777544 433 39999999999998764 588
Q ss_pred HHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 220 TFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 220 ~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..|+-||+|++|.|+..||++.+... ...++ ++..+.|++.+|.-+.|.|.|++|++.+..
T Consensus 128 ~vF~~~D~D~SG~I~~sEL~~Al~~~--Gy~Ls------pq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 128 NVFRTYDRDRSGTIDSSELRQALTQL--GYRLS------PQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred HHHHhcccCCCCcccHHHHHHHHHHc--CcCCC------HHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 99999999999999999999999742 34455 677888999999888999999999998765
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-09 Score=115.26 Aligned_cols=133 Identities=20% Similarity=0.238 Sum_probs=98.5
Q ss_pred cHHHHHHHHHccc--CCCccchhhhcccccCCCCHHHH-HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCCh--H---
Q 002711 144 GWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFA-SELFDALARRRGLTSSSITKSELRGFWEQITDQSF--D--- 215 (889)
Q Consensus 144 ~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg~~~~~~~~-~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~--e--- 215 (889)
.+.+=+++|+.-| +||.++++||...|.-.+...+. --+-+.+.+.|.|++|+|+++||+.-+........ +
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~ 240 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVL 240 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccc
Confidence 3445678999988 89999999999999544322221 12233456677778899999999987765432221 1
Q ss_pred HHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHH
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEM 284 (889)
Q Consensus 216 e~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~ 284 (889)
..-+++|..+|+|+||+++.+|++..+. +.....++.++..++.++|.|+||++|++|...
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~--------P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWIL--------PSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccC--------CCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 1346889999999999999999998873 222234577889999999999999999998643
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.6e-09 Score=97.81 Aligned_cols=135 Identities=17% Similarity=0.269 Sum_probs=100.5
Q ss_pred ccHHHHHHHHHccc--CCCccchhhhcccc---cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccC---Ch
Q 002711 143 EGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ---SF 214 (889)
Q Consensus 143 ~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~---~~ 214 (889)
+...++++.|..+| +||+|+.++...|| |.++++.++.+.......+. -+.-.|+|++|+-.+.++.+. ..
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~-~~~~rl~FE~fLpm~q~vaknk~q~t 86 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRRE-MNVKRLDFEEFLPMYQQVAKNKDQGT 86 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccch-hhhhhhhHHHHHHHHHHHHhccccCc
Confidence 44577889999999 89999999998887 88888776666655333221 123689999999998887543 34
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHH
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
-+..-.-.+.|||+++|.|...||++++... +++++ ++.++.++.-. .|.+|.|+|++|++.+.
T Consensus 87 ~edfvegLrvFDkeg~G~i~~aeLRhvLttl--Gekl~------eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 87 YEDFVEGLRVFDKEGNGTIMGAELRHVLTTL--GEKLT------EEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHHHHHHHhhcccCCcceeHHHHHHHHHHH--Hhhcc------HHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 4556667899999999999999999999643 34454 44455555543 47889999999998764
|
|
| >PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.4e-09 Score=127.42 Aligned_cols=111 Identities=17% Similarity=0.322 Sum_probs=90.0
Q ss_pred cEEEEEEEEecCCEEEEEEecCCC-CccCCccEEEEEEcCCC--CC-cccceeeeecC-CCCceEEEEEecCcchHHHHH
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVS--QF-QWHPFSITSAP-GDDYLSIHIRTLGDWTSQLKS 651 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~l~~~~p~~-~~~~pGQyv~l~~p~is--~~-e~HPFTIaSaP-~~~~l~l~Ir~~G~wT~~L~~ 651 (889)
..+|++++.+.+++..+++..|.- -.++||||+.|+++... .+ +..||||++.+ +.+.+++.++..|.-|+.|.+
T Consensus 792 ~~~Vv~~~~lap~i~~L~l~aP~iA~~~kPGQFVmL~~~~~g~~~l~~p~P~SI~~vD~e~g~It~i~rvVGkgT~~Ls~ 871 (1028)
T PRK06567 792 TSRVNKINILDDKTFELIIHSPLAAKNFKFGQFFRLQNYSEDAAKLIEPVALSPIDIDVEKGLISFIVFEVGKSTSLCKT 871 (1028)
T ss_pred ceEEEEEEEecCCEEEEEEeCcchhhcCCCCceEEEEeCCCCCccccCceeEEeeccCCCCCEEEEEEEEEChHHHHHhc
Confidence 357888899999999999988753 36889999999986432 22 55689999875 457899999999999999875
Q ss_pred HHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEcCcchhh
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATP 714 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVagGiGITP 714 (889)
+- +|+ .+.|.||+|.+.. ...++++|+||||+|++|
T Consensus 872 l~--------------------~Gd------~v~v~GPLG~pF~-i~~~k~vLLVgGGVGiAp 907 (1028)
T PRK06567 872 LS--------------------ENE------KVVLMGPTGSPLE-IPQNKKIVIVDFEVGNIG 907 (1028)
T ss_pred CC--------------------CCC------EEEEEcccCCCCC-CCCCCeEEEEEccccHHH
Confidence 33 677 7999999999864 334578999999999997
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.1e-08 Score=99.02 Aligned_cols=107 Identities=18% Similarity=0.241 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHH
Q 002711 178 FASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQER 257 (889)
Q Consensus 178 ~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~ 257 (889)
...++|+.+ +.++ +|.|+-+|+..++..++....++.++.+++.+|.|+||.|+.+||..++........... .
T Consensus 9 el~~~F~~f-D~d~--~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~---~ 82 (151)
T KOG0027|consen 9 ELKEAFQLF-DKDG--DGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE---A 82 (151)
T ss_pred HHHHHHHHH-CCCC--CCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc---c
Confidence 356666643 3333 499999999999999998899999999999999999999999999999974332211110 1
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 258 VEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 258 ~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..+.+..+|+.+|.|+||+||.+||+.+|...-
T Consensus 83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 83 SSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 244677799999999999999999999998754
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.5e-09 Score=91.50 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=55.0
Q ss_pred HHHHHHHHHhcC-CCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 216 ARLETFFDMVDK-NLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~aF~~~Dk-d~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..+..+|+.||+ |++|+|+.+||+.+|+.... +.++. .+.++.||+++|.|+||.|+|+||..+|..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg-~~ls~-----~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLP-HLLKD-----VEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhh-hhccC-----HHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 358899999999 99999999999999974221 22331 156777999999999999999999999965
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-08 Score=90.22 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=53.7
Q ss_pred HHHHHHHHHhc-CCCCc-eeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 216 ARLETFFDMVD-KNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~aF~~~D-kd~dG-~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..+..+|+.|| +|+|| +||.+||+++++..... .+.. ...++.++.||+++|.|+||.|+|+||..+|..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~-~~~~--~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTD-FLSS--QKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHH-hccc--ccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 35788899999 89998 69999999999642211 0110 011456777999999999999999999999965
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.72 E-value=4e-08 Score=87.54 Aligned_cols=67 Identities=19% Similarity=0.262 Sum_probs=53.6
Q ss_pred HHHHHHHHHhc-CCCCc-eeeHHHHHHHHHhhh---hcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 216 ARLETFFDMVD-KNLDG-RITEEEVKEIIALSA---SANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~aF~~~D-kd~dG-~It~eEl~~vl~~~~---~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..++.+|+.|| +|+|| +|+.+||+.+|+... .+...+ ++.++.+|+++|.|+||.|+|+||..++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~------~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKE------QEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCC------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 36889999998 89999 699999999997511 111111 445777999999999999999999999865
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.9e-07 Score=92.42 Aligned_cols=101 Identities=22% Similarity=0.203 Sum_probs=79.1
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHH
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~ 258 (889)
..++|.. .|.+++|.|+++||..++..+.....++.++.+|..+|+|++|.|+.+|+..++...... .. .
T Consensus 19 ~~~~F~~---~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-~~------~ 88 (158)
T PTZ00183 19 IREAFDL---FDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-RD------P 88 (158)
T ss_pred HHHHHHH---hCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-CC------c
Confidence 4455553 334445999999999999887655667889999999999999999999999887632211 11 1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
++.++.+|+.+|.|++|+|+.+||..++...
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKEL 119 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 3456779999999999999999999999753
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.8e-07 Score=89.92 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHH
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~ 258 (889)
..+.|..+ |.+++|.|+++||..++..++....++.++.+|+.+|.|++|.|+.+|+..++....... . .
T Consensus 13 ~~~~F~~~---D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~--~-----~ 82 (149)
T PTZ00184 13 FKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT--D-----S 82 (149)
T ss_pred HHHHHHHH---cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC--c-----H
Confidence 34555543 334459999999999988776666678899999999999999999999998886322111 1 1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNL 113 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH
Confidence 3456779999999999999999999999763
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.2e-07 Score=89.04 Aligned_cols=108 Identities=17% Similarity=0.208 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhh
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKI 254 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~ 254 (889)
++...+++.+++...|.+++|.|+++||..++..+....+++.+..+|..+|. +.|.|+.+||-.+|....... +
T Consensus 15 t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~--~-- 89 (160)
T COG5126 15 TEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG--D-- 89 (160)
T ss_pred CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC--C--
Confidence 44555666666655555567999999999999999999999999999999999 999999999999996422111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 255 QERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 255 ~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.++.+..+|+.+|.|+||+|+..|+..++....
T Consensus 90 ---~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg 122 (160)
T COG5126 90 ---KEEELREAFKLFDKDHDGYISIGELRRVLKSLG 122 (160)
T ss_pred ---cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc
Confidence 145566699999999999999999999998543
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.3e-07 Score=111.76 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=80.7
Q ss_pred cCcccHHHHHHHHHccc--CCCccchhhhccccc-CCCCHH---HHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCC
Q 002711 140 VGTEGWGEVEKRFDELA--VDGMLPKSSFGQCIG-MNESKD---FASELFDALARRRGLTSSSITKSELRGFWEQITDQS 213 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg-~~~~~~---~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~ 213 (889)
....+++++++.|+.+| +||.+ ...+-..+| ..+++. +++++|+.+ |.++ +|.|+++||+.++..+....
T Consensus 137 f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~-D~Dg--dG~IdfdEFl~lL~~lg~~~ 212 (644)
T PLN02964 137 FVTQEPESACESFDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAIV-DYDE--DGQLSFSEFSDLIKAFGNLV 212 (644)
T ss_pred ccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHh-CCCC--CCeEcHHHHHHHHHHhccCC
Confidence 34457789999999999 78887 444545557 355544 378888854 3333 59999999999999887777
Q ss_pred hHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 214 ~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
.+++++.+|+.||+|+||+|+.+||++++..
T Consensus 213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 213 AANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 8899999999999999999999999999974
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=84.71 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcC-CC-CceeeHHHHHHHHHhhhh---cccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 215 DARLETFFDMVDK-NL-DGRITEEEVKEIIALSAS---ANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~aF~~~Dk-d~-dG~It~eEl~~vl~~~~~---~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...++.+|+.||. |+ ||+|+.+||+.+++.... ....+ ++.++.+|+++|.|++|.|+|+||..+|..
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s------~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKD------PMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhcccc------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3568999999997 97 799999999999974211 11111 456777999999999999999999999875
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.5e-07 Score=100.62 Aligned_cols=157 Identities=18% Similarity=0.271 Sum_probs=103.7
Q ss_pred ccccccchhHHHHhccccccccccCcccHHHHHHHHHccc--CCCccchhhhcccc----cCCCCHHHHHHHHHHHHhhC
Q 002711 117 DKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI----GMNESKDFASELFDALARRR 190 (889)
Q Consensus 117 ~~~~~~~s~~~~al~~L~~i~~~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l----g~~~~~~~~~~lf~~l~~~d 190 (889)
.|+++-.++|-++|+. |..+. -.+|++.|+.+| ++|+|+....+.|+ |+.-. ..-|-..+...
T Consensus 442 qR~~~vEeSAlk~Lre-rl~s~------~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LP---Wr~L~~kla~~- 510 (631)
T KOG0377|consen 442 QRMGIVEESALKELRE-RLRSH------RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLP---WRLLRPKLANG- 510 (631)
T ss_pred HHhhHHHHHHHHHHHH-HHHhh------hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCc---HHHhhhhccCC-
Confidence 3445554555444433 32222 246899999999 89999999998887 44321 12222323323
Q ss_pred CCCCCcccHHHHHHHHHH--hccC----------ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHH
Q 002711 191 GLTSSSITKSELRGFWEQ--ITDQ----------SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 191 ~~~~G~Id~~EF~~~~~~--~~~~----------~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~ 258 (889)
..+|.+.|.+-...+.. +... ...+.|..+|+..|+|++|.||.+||+.+.++..+.......
T Consensus 511 -s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~---- 585 (631)
T KOG0377|consen 511 -SDDGKVEYKSTLDNLDTEVILEEAGSSLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAIS---- 585 (631)
T ss_pred -CcCcceehHhHHHHhhhhhHHHHHHhHHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcC----
Confidence 33488988887665432 1111 123468999999999999999999999999864332222211
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
++++.++-+.+|.|+||.|++.||.+...-.
T Consensus 586 ~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 586 DDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 4455667888999999999999999988643
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.3e-07 Score=83.64 Aligned_cols=71 Identities=21% Similarity=0.327 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhc-CCCCc-eeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 215 DARLETFFDMVD-KNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~aF~~~D-kd~dG-~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+.++.+|++|| +|++| .|+.+||+.+++..... .+.. ...++.++.+|+++|.|++|.|+|+||..+|..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~-~~~~--~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSD-FLDA--QKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHH-HccC--CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467999999997 99999 59999999999631111 0100 001445777999999999999999999998875
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.55 E-value=8.1e-07 Score=85.11 Aligned_cols=102 Identities=18% Similarity=0.185 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHH
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~ 258 (889)
.++-|+ ..+.+++|+||++|+..++...+-....+.+..+..-+|+++.|.|+.++|+.++........ .
T Consensus 35 i~e~f~---lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d-------t 104 (172)
T KOG0028|consen 35 IKEAFE---LFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD-------T 104 (172)
T ss_pred HHHHHH---hhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC-------c
Confidence 344455 334455699999999999988887788889999999999999999999999999863322211 2
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.+..+|+.+|.|++|.|++.+|+.++.+-.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLg 136 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELG 136 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhC
Confidence 55677899999999999999999999998743
|
|
| >KOG1158 consensus NADP/FAD dependent oxidoreductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.7e-07 Score=106.67 Aligned_cols=204 Identities=13% Similarity=0.154 Sum_probs=110.4
Q ss_pred CccEEEEEEcCCCCCcccceeeeecCC--CCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCcc
Q 002711 605 SGQYIFVNCAAVSQFQWHPFSITSAPG--DDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIP 682 (889)
Q Consensus 605 pGQyv~l~~p~is~~e~HPFTIaSaP~--~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~ 682 (889)
|+.|+-=.+|. .+.++|||+|+|. .+.+.+.+-....-+..-.. ...|-.|+||.. .++|+.
T Consensus 409 P~~~ll~~lp~---L~pR~YSIssS~~~~~~~vhl~~~vv~~~~~dg~~-------~r~GVcS~~L~~-l~~~~~----- 472 (645)
T KOG1158|consen 409 PLPHLLELLPR---LQPRYYSISSSPKVHPNEVHLTVTVVEYGTPDGGP-------KRYGVCSNWLSN-LKPGEK----- 472 (645)
T ss_pred CHHHHHHhCcc---ccccccccccCcccCCCEEEEEEEEeeeccCCCCC-------ccceehhhhHHh-cCCccc-----
Confidence 45444333344 5899999999984 44454444432111100000 011344555543 234441
Q ss_pred EEEEeCCCCCCCC--CCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEE
Q 002711 683 KLLIDGPYGAPAQ--DYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYW 760 (889)
Q Consensus 683 ~v~vdGPYG~~~~--~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W 760 (889)
+-.-+|-+.+.- +......++|||.|+||+||.++++.......++. ..... +.||+
T Consensus 473 -~~~~~~~~~s~frlp~dp~~PiIMIGpGTGiAPFRgFlq~r~~~~~~~~-------------------~~~~~-~~Lf~ 531 (645)
T KOG1158|consen 473 -VPNPVPVGKSMFRLPSDPSTPIIMIGPGTGIAPFRGFLQERLFLKQQGP-------------------KFGGG-MWLFF 531 (645)
T ss_pred -cCcceeecccceecCCCCCCcEEEEcCCCcchhhHHHHHHHHHhhhcCc-------------------cCCcc-eEEEE
Confidence 111123333321 11233589999999999999999999887754431 12244 89999
Q ss_pred EeCCCCchhHHHHHHHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccC-CCCHHH
Q 002711 761 VTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFA-RPNWRT 839 (889)
Q Consensus 761 ~~R~~~~~~wf~~~l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~G-RPd~~~ 839 (889)
+||+++....+++++++..+.. ...++..-.++. .+.. +..++-. +-.-++
T Consensus 532 GcR~~~~d~LY~eE~~~~~~~~--~l~~l~~A~SRe---q~~~-----------------------k~YVQd~l~e~~d~ 583 (645)
T KOG1158|consen 532 GCRNSDEDYLYREEWEEYKKAG--ILTRLDVAFSRE---QTPK-----------------------KIYVQDRLREYADE 583 (645)
T ss_pred eCCCchHHHHHHHHHHHHHhcC--cchhheeeeecc---CCCC-----------------------ceehhhHHHHHHHH
Confidence 9999998778888887763321 222233322322 1000 0000000 011122
Q ss_pred HHHHHHhhCCCCeEEEEEeCChh-HHHHHHHHHHhhhcC
Q 002711 840 VFKHVAVKHTDERVGVFYCGAPG-LTGELRRLSQDFSRK 877 (889)
Q Consensus 840 v~~~~~~~~~~~~v~V~~CGP~~-m~~~vr~~~~~~~~~ 877 (889)
|.+-+.++ ...+|+||+.. |+++|.++..+...+
T Consensus 584 v~~~L~~~----~g~iYvCGd~~~Ma~dV~~~L~~i~~~ 618 (645)
T KOG1158|consen 584 VWELLKKE----GGHIYVCGDAKGMAKDVQDALVRILAK 618 (645)
T ss_pred HHHHHhcC----CcEEEEecCCccchHHHHHHHHHHHHh
Confidence 33333222 34799999998 999999988877644
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.1e-07 Score=84.62 Aligned_cols=85 Identities=25% Similarity=0.329 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCCccc
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSA 294 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~~~~ 294 (889)
.++++.+|+.||+|++|.|+.+|++++++.. +++ ++.++.||..+|.|++|.|+|+||..+|...-..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~------~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~-- 76 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLP------QTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK-- 76 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCC------HHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH--
Confidence 4578999999999999999999999999742 222 3456679999999999999999999988752211
Q ss_pred ccccchhhhhhhhhhccCCC
Q 002711 295 NLLTDSRVLSQMLSQRLVPT 314 (889)
Q Consensus 295 ~~~~~~~~l~~~~s~~l~~~ 314 (889)
.....++..+.++|.|.
T Consensus 77 ---~~g~~~~~~~~~~~~~~ 93 (96)
T smart00027 77 ---LNGYPIPASLPPSLIPP 93 (96)
T ss_pred ---HcCCCCCccCCHhhcCC
Confidence 12233555566666554
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.8e-07 Score=97.95 Aligned_cols=141 Identities=20% Similarity=0.134 Sum_probs=99.2
Q ss_pred ccHHHHHHHHHccc--CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc-------cCC
Q 002711 143 EGWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-------DQS 213 (889)
Q Consensus 143 ~~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-------~~~ 213 (889)
+.-.++.++|.++| +||.|+.+|+..-+.....+....+.-..+...+.+.+|.|+++|++..+.... +..
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 34468999999999 899999999988874432222233333334444455569999999998877531 111
Q ss_pred ---hHH----HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHH
Q 002711 214 ---FDA----RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 214 ---~ee----~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
... +=+.-|+.-|.|+||.+|.+||..++--. .+ + ...+=++++-|++.|+|+||+|+++||+.=|
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPE--e~--p---~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~ 226 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPE--EH--P---HMKDIVIAETLEDIDKNGDGKISLEEFIGDL 226 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChh--hc--c---hHHHHHHHHHHhhcccCCCCceeHHHHHhHH
Confidence 111 23567999999999999999999888310 01 1 1114456778999999999999999999977
Q ss_pred HhCC
Q 002711 287 LQAP 290 (889)
Q Consensus 287 ~~~p 290 (889)
-.++
T Consensus 227 ~~~~ 230 (325)
T KOG4223|consen 227 YSHE 230 (325)
T ss_pred hhcc
Confidence 7655
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.6e-07 Score=81.57 Aligned_cols=70 Identities=14% Similarity=0.202 Sum_probs=53.3
Q ss_pred HHHHHHHHH-hcCCCCc-eeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 216 ARLETFFDM-VDKNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~aF~~-~Dkd~dG-~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+. +|+|++| .||.+||+.++....... +.. ...+..++.+|+++|.|+||.|+|+||..+|..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~-~~~--~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASF-TKN--QKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHh-hcC--CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 467889998 7899987 999999999997432100 000 001456777999999999999999999998865
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.3e-07 Score=85.76 Aligned_cols=64 Identities=22% Similarity=0.273 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 214 ~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..+++..+|..+|+|+||.||.+||..+. + .. .+..++.+|+.+|.|+||+||++||...+ ..+
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-l--~~---------~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl-~~~ 109 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR-L--DP---------NEHCIKPFFESCDLDKDGSISLDEWCYCF-IKE 109 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH-c--cc---------hHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hCh
Confidence 45789999999999999999999999876 1 10 14456679999999999999999999999 444
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.9e-07 Score=76.47 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=50.9
Q ss_pred HHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 219 ETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 219 ~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+|+.+|+|++|.|+.+|++.++... +.+ ++.++.+++.+|.|++|.|+|+||..+|..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~----g~~------~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS----GLP------RSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc----CCC------HHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 568999999999999999999999642 122 345677999999999999999999998865
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.4e-07 Score=79.83 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=52.5
Q ss_pred HHHHHHHHhcC-CC-CceeeHHHHHHHHHhh-hhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 217 RLETFFDMVDK-NL-DGRITEEEVKEIIALS-ASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~aF~~~Dk-d~-dG~It~eEl~~vl~~~-~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+-.+|..||. |+ +|+|+.+||++++... ....+++ ++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t------~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQ------DAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 46778999998 78 8999999999999621 1122233 455677999999999999999999998864
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.7e-06 Score=100.48 Aligned_cols=185 Identities=15% Similarity=0.184 Sum_probs=109.7
Q ss_pred CcccceeeeecCCC--CceEEEEEecCcch-HHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCC-CCC
Q 002711 619 FQWHPFSITSAPGD--DYLSIHIRTLGDWT-SQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG-APA 694 (889)
Q Consensus 619 ~e~HPFTIaSaP~~--~~l~l~Ir~~G~wT-~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG-~~~ 694 (889)
...+=|||+|+|.. +.+.+.|..+.--+ .+ ...|..|++|......|+ .+.|-..-+ .+.
T Consensus 371 lkPR~YSIsSs~~~~~~~vhltV~vV~y~~~~~----------~r~GvcS~~L~~~~~~g~------~i~v~v~~n~nf~ 434 (587)
T COG0369 371 LKPRLYSIASSPGVSPDEVHLTVGVVRYQAEGR----------ERYGVCSGYLADLLEEGD------TIPVFVQPNKNFR 434 (587)
T ss_pred CCCeeeEeccCCCCCCCeEEEEEEEEEeccCCC----------cccccchHHHHhhhcCCC------eEEEEeccCCccc
Confidence 45677999999964 55666666552211 11 124666777765444455 455554444 232
Q ss_pred CCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCCchhHHHHH
Q 002711 695 QDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGV 774 (889)
Q Consensus 695 ~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~~~~wf~~~ 774 (889)
.+-.....++|||.|+||+||.++++....+.. ..++.|++++|++.+=..++++
T Consensus 435 lp~~~~~PiIMIG~GTGIAPFRafvq~r~~~~~-------------------------~gk~wLfFG~R~~~~DfLY~~E 489 (587)
T COG0369 435 LPEDPETPIIMIGPGTGIAPFRAFVQERAANGA-------------------------EGKNWLFFGCRHFTEDFLYQEE 489 (587)
T ss_pred cCCCCCCceEEEcCCCCchhHHHHHHHHHhccc-------------------------cCceEEEecCCCCccchhhHHH
Confidence 222222689999999999999999998655421 2378999999996654468887
Q ss_pred HHHHHhhcCCCcEEEEEeeeccccCCChhhHHHHHHHhhhcccCCCccccCCccccccCCCCHHHHHHHHHhhCCCCeEE
Q 002711 775 MNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVG 854 (889)
Q Consensus 775 l~el~~~~~~~~i~l~~y~T~~~~~~d~~s~~~~~~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~ 854 (889)
+++..... ...++....++.-++ +. .+|+. + |-+- +.+.++..+ + ..
T Consensus 490 we~~~~~G--~~~~l~~AfSRdq~~---Ki----YVQd~--------------l-----re~~-del~~~l~~---g-a~ 536 (587)
T COG0369 490 WEEYLKDG--VLTRLDLAFSRDQEE---KI----YVQDR--------------L-----REQA-DELWEWLEE---G-AH 536 (587)
T ss_pred HHHHHhcC--CceeEEEEEeecCCC---Cc----cHHHH--------------H-----HHhH-HHHHHHHHC---C-CE
Confidence 77644321 245555555543110 00 01100 0 1111 222233332 2 47
Q ss_pred EEEeC-ChhHHHHHHHHHHhhhcC
Q 002711 855 VFYCG-APGLTGELRRLSQDFSRK 877 (889)
Q Consensus 855 V~~CG-P~~m~~~vr~~~~~~~~~ 877 (889)
+|+|| +..|.++|.++..+...+
T Consensus 537 ~YVCGd~~~Ma~dV~~AL~~il~~ 560 (587)
T COG0369 537 IYVCGDAKGMAKDVEEALLDILAK 560 (587)
T ss_pred EEEeCCCccchHHHHHHHHHHHHh
Confidence 99999 899999999998887654
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.3e-06 Score=101.50 Aligned_cols=121 Identities=12% Similarity=0.181 Sum_probs=79.7
Q ss_pred CCccchhhhcccccC---CCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc-CChHHH---HHHHHHHhcCCCC
Q 002711 158 DGMLPKSSFGQCIGM---NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD-QSFDAR---LETFFDMVDKNLD 230 (889)
Q Consensus 158 dG~Ls~~ef~~~lg~---~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-~~~ee~---l~~aF~~~Dkd~d 230 (889)
...++.+++...-.. .-.....+++.++|+..|.+++|.| +..++..+.. ...+++ ++.+|+.+|.|+|
T Consensus 118 ~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~Dgd 193 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDED 193 (644)
T ss_pred cCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCC
Confidence 345555555433222 1122233444444445555556887 4445555542 333333 8999999999999
Q ss_pred ceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 231 GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 231 G~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
|.|+.+||..++.... ...+ ++.+..+|+.+|.|+||+|+++||+.+|...+
T Consensus 194 G~IdfdEFl~lL~~lg--~~~s------eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 194 GQLSFSEFSDLIKAFG--NLVA------ANKKEELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred CeEcHHHHHHHHHHhc--cCCC------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 9999999999997422 1111 44577799999999999999999999998754
|
|
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-06 Score=78.33 Aligned_cols=71 Identities=17% Similarity=0.258 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcC--CCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 215 DARLETFFDMVDK--NLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~aF~~~Dk--d~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+.++.+|.+||+ |++|.|+.+||+.+++..... .++ ....++.++.||.++|.|++|.|+|+||..+|..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~-~~~--~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPN-FLK--NQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhh-hcc--CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 3568899999999 899999999999999641111 110 0011445777999999999999999999998865
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.1e-06 Score=84.96 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc-cCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchh
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSK 253 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~ 253 (889)
++..+++++..+-.... +|.++.++|......+- .++.+.-.+.+|+.||+|+||.|+.+|+-..+.....+.
T Consensus 24 ~~~ei~~~Yr~Fk~~cP--~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt---- 97 (193)
T KOG0044|consen 24 SKKEIQQWYRGFKNECP--SGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT---- 97 (193)
T ss_pred CHHHHHHHHHHhcccCC--CCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc----
Confidence 45567777776655554 49999999999988754 577788899999999999999999999766665332221
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 254 IQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 254 ~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+++-.+-.|+.+|.|+||+|+++|+.+++..
T Consensus 98 ----~eekl~w~F~lyD~dgdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 98 ----LEEKLKWAFRLYDLDGDGYITKEEMLKIVQA 128 (193)
T ss_pred ----HHHHhhhhheeecCCCCceEcHHHHHHHHHH
Confidence 2334444699999999999999999998864
|
|
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-06 Score=91.90 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=107.4
Q ss_pred ccHHHHHHHHHccc------CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCC-hH
Q 002711 143 EGWGEVEKRFDELA------VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQS-FD 215 (889)
Q Consensus 143 ~~~~~l~~~F~~ld------~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~-~e 215 (889)
-.|.+|.+..+... +.+.|-..||..-+....+ .....+|.+ ++..+ +|.+||.|....+..++... ..
T Consensus 220 L~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvs-d~l~~~f~L-Fde~~--tg~~D~re~v~~lavlc~p~~t~ 295 (412)
T KOG4666|consen 220 LPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVS-DKLAPTFML-FDEGT--TGNGDYRETVKTLAVLCGPPVTP 295 (412)
T ss_pred CChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchh-hhhhhhhhe-ecCCC--CCcccHHHHhhhheeeeCCCCcH
Confidence 34566666555443 7889999999999877654 556778874 44444 49999999999888776544 56
Q ss_pred HHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCCcc
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQS 293 (889)
Q Consensus 216 e~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~~~ 293 (889)
+-++.+|++||.+.||.+..++|.-+++.......+. +..+|.+.|...||+|+|+||++++..+|...
T Consensus 296 ~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~l~---------v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 296 VIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEVLR---------VPVLFPSIEQKDDPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred HHHHHHHHhcccccccccchHHHHHHHHHhcCcceee---------ccccchhhhcccCcceeHHHHHHHHHhCchhh
Confidence 7899999999999999999999998887543322222 23389999999999999999999999999764
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-06 Score=71.65 Aligned_cols=61 Identities=25% Similarity=0.400 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccC----ChHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQ----SFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~----~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl 242 (889)
..++|+.+|.++ +|.|+.+||..++..+... ..++.++.+|+.+|+|+||.|+.+|+..++
T Consensus 2 l~~~F~~~D~d~---~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDG---DGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTS---SSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCc---cCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 356777544333 4999999999999887643 345667888999999999999999998764
|
... |
| >KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3e-06 Score=93.85 Aligned_cols=133 Identities=20% Similarity=0.259 Sum_probs=103.9
Q ss_pred HHHHHHHccc--CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCC-CCCCcccHHHHHHHHHHhccCChHHHHHHHHH
Q 002711 147 EVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRG-LTSSSITKSELRGFWEQITDQSFDARLETFFD 223 (889)
Q Consensus 147 ~l~~~F~~ld--~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~-~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~ 223 (889)
.+.-.|-.|| .||.|+.+++...-.-..+.-++++||+...+... ..+|.+||++|+.++....+.....-++..|+
T Consensus 279 viy~kFweLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFr 358 (493)
T KOG2562|consen 279 VIYCKFWELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFR 358 (493)
T ss_pred HHHHHHhhhccccccccCHHHHHHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhhee
Confidence 3444588898 89999999998765333457889999994333221 23489999999999998888888888999999
Q ss_pred HhcCCCCceeeHHHHHHHHHh------hhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHH
Q 002711 224 MVDKNLDGRITEEEVKEIIAL------SASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEM 284 (889)
Q Consensus 224 ~~Dkd~dG~It~eEl~~vl~~------~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~ 284 (889)
..|.|+||.|+.+|++.+... +.....++ .++...+|+..+-+.+.++|+++||+.
T Consensus 359 clDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~-----fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 359 CLDLDGDGILTLNELRYFYEEQLQRMECMGQEALP-----FEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred eeeccCCCcccHHHHHHHHHHHHHHHHhcCCCccc-----HHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 999999999999999988753 11112222 266777899999999999999999987
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.2e-06 Score=67.28 Aligned_cols=53 Identities=28% Similarity=0.451 Sum_probs=42.1
Q ss_pred CCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 229 LDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 229 ~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+|.||.+||+.++.... ...++ ++.++.+|..+|.|+||+|+|+||..+|..
T Consensus 1 ~~G~i~~~~~~~~l~~~g-~~~~s------~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLG-IKDLS------EEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTT-SSSSC------HHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhC-CCCCC------HHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999999995321 11133 445778999999999999999999999864
|
... |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.8e-06 Score=67.55 Aligned_cols=61 Identities=30% Similarity=0.417 Sum_probs=50.6
Q ss_pred HHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHH
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 218 l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
++.+|+.+|.|++|.|+.+|+..+++.... ..+ ++.+..+++.+|.|++|.|+++||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~--~~~------~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGE--GLS------EEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--CCC------HHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 678899999999999999999999974321 111 4556679999999999999999998865
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.08 E-value=9e-06 Score=82.24 Aligned_cols=123 Identities=16% Similarity=0.107 Sum_probs=94.3
Q ss_pred ccHHHHHHHHHcccCCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHH
Q 002711 143 EGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 143 ~~~~~l~~~F~~ld~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF 222 (889)
+-..-+-.+|+. +.+|+|..+||.+....- ...+.+|.-+| .|++|+|+..|+..++..++-..+++-++.++
T Consensus 94 ~TcrlmI~mfd~-~~~G~i~f~EF~~Lw~~i---~~Wr~vF~~~D---~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv 166 (221)
T KOG0037|consen 94 ETCRLMISMFDR-DNSGTIGFKEFKALWKYI---NQWRNVFRTYD---RDRSGTIDSSELRQALTQLGYRLSPQFYNLLV 166 (221)
T ss_pred HHHHHHHHHhcC-CCCCccCHHHHHHHHHHH---HHHHHHHHhcc---cCCCCcccHHHHHHHHHHcCcCCCHHHHHHHH
Confidence 444444445542 289999999998877431 12466777444 34459999999999999999999999999999
Q ss_pred HHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcc--cHHHHHHHH
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLL 286 (889)
Q Consensus 223 ~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l 286 (889)
+.||.-++|.|..+++.+++.... ..-+.|++.|++.+|.| +|+||..+.
T Consensus 167 ~kyd~~~~g~i~FD~FI~ccv~L~--------------~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 167 RKYDRFGGGRIDFDDFIQCCVVLQ--------------RLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred HHhccccCCceeHHHHHHHHHHHH--------------HHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 999999999999999998875211 11227999999999975 789998875
|
|
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.6e-05 Score=69.58 Aligned_cols=69 Identities=16% Similarity=0.284 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCC--CCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 217 RLETFFDMVDKN--LDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~aF~~~Dkd--~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+-..|..|+.+ ++|.|+.+||+.++...... .++ ....++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t--~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLK--KEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhc--cCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 567789999865 48999999999999632211 111 0011456778999999999999999999999875
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.2e-05 Score=63.06 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=45.0
Q ss_pred CCcccHHHHHHHHHHhccC-ChHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 194 SSSITKSELRGFWEQITDQ-SFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~-~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+|.|+.+||..++..++.. ..++.++.+|..+|.|+||+|+.+||..++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 5999999999999767666 7778899999999999999999999999875
|
... |
| >KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.7e-05 Score=83.86 Aligned_cols=127 Identities=21% Similarity=0.300 Sum_probs=91.4
Q ss_pred HHHHHccc--CCCccchhhhcccc---------cC------CCC----HHHHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 002711 149 EKRFDELA--VDGMLPKSSFGQCI---------GM------NES----KDFASELFDALARRRGLTSSSITKSELRGFWE 207 (889)
Q Consensus 149 ~~~F~~ld--~dG~Ls~~ef~~~l---------g~------~~~----~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~ 207 (889)
+=.|+.+| +||.|+++||.... |+ ... .+....|..-+.-.|++ ++++++||++++.
T Consensus 236 ~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~--~kLs~deF~~F~e 313 (489)
T KOG2643|consen 236 RIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGN--GKLSIDEFLKFQE 313 (489)
T ss_pred eeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCC--ccccHHHHHHHHH
Confidence 34578888 99999999997765 22 001 12223344445555664 9999999999997
Q ss_pred HhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHH
Q 002711 208 QITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 208 ~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
.+ .+|-++.=|..+|+..+|.|++.+|.++|-.....+... -+.+++..-++++.+ +-.||++||++...
T Consensus 314 ~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~-----k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 314 NL----QEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKK-----KHKYLKRVKEKFKDD-GKGISLQEFKAFFR 383 (489)
T ss_pred HH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHh-----HHHHHHHHHHhccCC-CCCcCHHHHHHHHH
Confidence 66 477788889999999999999999999986443333222 145677788888877 55699999998764
|
|
| >PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.3e-05 Score=55.60 Aligned_cols=27 Identities=41% Similarity=0.575 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+++.+|+.||+|+||+|+.+||+.+++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 478899999999999999999999985
|
This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D .... |
| >PF14658 EF-hand_9: EF-hand domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.3e-05 Score=64.89 Aligned_cols=62 Identities=19% Similarity=0.333 Sum_probs=51.7
Q ss_pred HHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCC-CcccHHHHHHHHHh
Q 002711 220 TFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNL-GYIELYNLEMLLLQ 288 (889)
Q Consensus 220 ~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~d-G~Is~~EF~~~l~~ 288 (889)
.+|++||.++.|.|...+|..+|+..+..+. + |..++.+..++|+++. |.|++++|...|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p-~------e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSP-E------ESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCC-c------HHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999986654221 1 3455669999999998 99999999999975
|
|
| >PRK05419 putative sulfite oxidase subunit YedZ; Reviewed | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.7e-05 Score=78.09 Aligned_cols=127 Identities=15% Similarity=0.090 Sum_probs=84.1
Q ss_pred ecCCcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCcccccCccCccCCCCCCcccccccccchhHHHHHHHHHHH
Q 002711 411 VPFDDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAI 490 (889)
Q Consensus 411 ~~~d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~~l~~~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i 490 (889)
.+.+..+.+||++|..+++++++|.+.++..+.. ..++ ..+.+ ..+...-+.|.+++++++.
T Consensus 68 ~~~~~l~~~RR~LGl~af~~a~lH~~~y~~~~~~-------~~~~---~~~~~--------i~~~~~i~~G~ia~~lLl~ 129 (205)
T PRK05419 68 TGQPLLIRTRRLLGLWAFFYATLHLLSYLLLDLG-------LDWS---LLGKE--------IVKRPYITVGMAAFLILLP 129 (205)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------ccHH---HHHHH--------HHhchHHHHHHHHHHHHHH
Confidence 3456889999999999999999999887654210 0000 01110 0011112458888888889
Q ss_pred HHHhhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHHHHHhhhhhhccccccceehhhhhhhhhhHhHHHHHHH
Q 002711 491 SYTLAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRA 570 (889)
Q Consensus 491 ~~~~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll~~H~~~~~l~~~w~~~~~w~y~~~~~~l~~~drl~R~ 570 (889)
+.++|..+.||+. +| .|..+|.+..+++++.++|..... .... .....|.++ ++++..-|+.+.
T Consensus 130 LaiTS~~~~~rrL-----------g~-~Wk~LH~l~Y~a~~L~~~H~~~~~-k~~~--~~~~~y~~~-~~~ll~~R~~~~ 193 (205)
T PRK05419 130 LALTSTRASQRRL-----------GK-RWQKLHRLVYLIAILAPLHYLWSV-KSDS--PEPLIYAAI-VAVLLALRLKKL 193 (205)
T ss_pred HHHHhhHHHHHHH-----------HH-HHHHHHHHHHHHHHHHHHHHHHHh-cccc--ccHHHHHHH-HHHHHHHHHHHH
Confidence 9999999998873 67 799999999998898899955431 1111 234456544 345555687776
Q ss_pred H
Q 002711 571 F 571 (889)
Q Consensus 571 ~ 571 (889)
.
T Consensus 194 ~ 194 (205)
T PRK05419 194 R 194 (205)
T ss_pred H
Confidence 5
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=6e-05 Score=82.56 Aligned_cols=148 Identities=16% Similarity=0.201 Sum_probs=106.8
Q ss_pred HHhccccccccccCcccHHHHHHHHHccc--CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHH
Q 002711 128 RALKGLKFITKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGF 205 (889)
Q Consensus 128 ~al~~L~~i~~~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~ 205 (889)
+-.+||..+....+.. +..+..|..+| .||.++.+||...+.-. +....++|+.+|.+. +|.|+-+|...+
T Consensus 35 ~l~k~~~~l~~~~~~~--~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~--E~~l~~~F~~iD~~h---dG~i~~~Ei~~~ 107 (463)
T KOG0036|consen 35 QLEKGLEKLDHPKPNY--EAAKMLFSAMDANRDGRVDYSEFKRYLDNK--ELELYRIFQSIDLEH---DGKIDPNEIWRY 107 (463)
T ss_pred HHHHHHHhcCCCCCch--HHHHHHHHhcccCcCCcccHHHHHHHHHHh--HHHHHHHHhhhcccc---CCccCHHHHHHH
Confidence 3344444444443333 44688999999 89999999999988553 344567777655544 499999999999
Q ss_pred HHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHH
Q 002711 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEML 285 (889)
Q Consensus 206 ~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~ 285 (889)
+..+.....+++++.+|+..|+|+++.|+.+|.++.+.+.. .+.+++ .-..|+. +.-+|.+.|..|. |+|...
T Consensus 108 l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p----~s~i~d-i~~~W~h-~~~idigE~~~iP-dg~s~~ 180 (463)
T KOG0036|consen 108 LKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP----ESDLED-IYDFWRH-VLLIDIGEDAVLP-DGDSKL 180 (463)
T ss_pred HHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC----hhHHHH-HHHhhhh-heEEEccccccCC-cchHHH
Confidence 99999899999999999999999999999999999986422 122222 1222333 2356888888888 777766
Q ss_pred HHhC
Q 002711 286 LLQA 289 (889)
Q Consensus 286 l~~~ 289 (889)
..+.
T Consensus 181 e~~~ 184 (463)
T KOG0036|consen 181 ENDS 184 (463)
T ss_pred Hhcc
Confidence 5543
|
|
| >KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.9e-05 Score=86.66 Aligned_cols=128 Identities=20% Similarity=0.279 Sum_probs=78.0
Q ss_pred cEEEEEEcCCCCCcccceeeeecCCCCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEE
Q 002711 607 QYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLI 686 (889)
Q Consensus 607 Qyv~l~~p~is~~e~HPFTIaSaP~~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~v 686 (889)
+|++=.+|.+ ..+.|||+|.|+...+.+.|..+.- +..|+ ++..|-.|.|+. .+++|+ .+.+.|
T Consensus 357 ~yl~d~~P~I---rPR~fSIas~~~~~~leL~VAiV~y-kT~l~-------~pRrGlCS~wl~-sL~~g~----~i~~~v 420 (574)
T KOG1159|consen 357 DYLLDLLPVI---RPRAFSIASSPGAHHLELLVAIVEY-KTILK-------EPRRGLCSNWLA-SLKPGD----EIPIKV 420 (574)
T ss_pred HHHHHhcccc---ccceeeeccCCCCCceeEEEEEEEE-eeecc-------ccccchhHHHHh-hcCCCC----eEEEEE
Confidence 4555456666 6799999999998888887766632 22222 133455666654 344554 234444
Q ss_pred eCCCCCCCCCCCCCCEEEEEEcCcchhhHHHHHHHHHHHHhhhhhcccccccCCCCCcCCCCCCCccceEEEEEEeCCCC
Q 002711 687 DGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQG 766 (889)
Q Consensus 687 dGPYG~~~~~~~~~~~vllVagGiGITP~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~W~~R~~~ 766 (889)
. =|...-+..-...++|||-|+||||+.+++++-+.+. ....-++++||..+
T Consensus 421 ~--~g~l~~p~~~~~PlImVGPGTGvAPfRa~i~er~~q~--------------------------~~~~~lFfGCR~K~ 472 (574)
T KOG1159|consen 421 R--PGTLYFPSDLNKPLIMVGPGTGVAPFRALIQERIYQG--------------------------DKENVLFFGCRNKD 472 (574)
T ss_pred e--cCccccCCCCCCCeEEEcCCCCcccHHHHHHHHHhhc--------------------------cCCceEEEecccCC
Confidence 3 1332222222347999999999999999999866431 12236788999876
Q ss_pred chhHHHHHHHHH
Q 002711 767 SFEWFRGVMNEV 778 (889)
Q Consensus 767 ~~~wf~~~l~el 778 (889)
.-..|.+...+.
T Consensus 473 ~Df~y~~eW~~~ 484 (574)
T KOG1159|consen 473 KDFLYEDEWTEL 484 (574)
T ss_pred ccccccchhhhh
Confidence 433455444333
|
|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00011 Score=81.50 Aligned_cols=140 Identities=20% Similarity=0.302 Sum_probs=97.5
Q ss_pred HHHHHHHHccc-----CCCccchhhhcccc-cC---CCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHH
Q 002711 146 GEVEKRFDELA-----VDGMLPKSSFGQCI-GM---NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDA 216 (889)
Q Consensus 146 ~~l~~~F~~ld-----~dG~Ls~~ef~~~l-g~---~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee 216 (889)
++|+..|.+++ +.-..+-++|.... |+ ...++...+|....+|.-. ||-|+|+||..+-..+| .+|.
T Consensus 33 ~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tK--Dglisf~eF~afe~~lC--~pDa 108 (694)
T KOG0751|consen 33 KELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTK--DGLISFQEFRAFESVLC--APDA 108 (694)
T ss_pred HHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcc--cccccHHHHHHHHhhcc--CchH
Confidence 45666666665 34467788887653 33 2334556666666666444 59999999998866655 4578
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccch---------------------------hhHHHHHHHHHHHHHhc
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLS---------------------------KIQERVEEYAALIMEEL 269 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~---------------------------~~~~~~~e~~~~i~~e~ 269 (889)
.-..+|+.||+.++|.+|.+++++++....-.+... .+.+-.+|.+.+.|++-
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~ 188 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREK 188 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999997321111110 11222455677788888
Q ss_pred CCCCCCcccHHHHHHHHHhC
Q 002711 270 DPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 270 D~d~dG~Is~~EF~~~l~~~ 289 (889)
|..++|.||--+|...|...
T Consensus 189 d~~~ng~is~Ldfq~imvt~ 208 (694)
T KOG0751|consen 189 DKAKNGFISVLDFQDIMVTI 208 (694)
T ss_pred cccCCCeeeeechHhhhhhh
Confidence 99999999888888887654
|
|
| >PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand | Back alignment and domain information |
|---|
Probab=97.77 E-value=2.4e-05 Score=54.28 Aligned_cols=27 Identities=15% Similarity=0.260 Sum_probs=24.5
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 262 AALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 262 ~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.+|+.+|.|+||+|+++||..+|++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 455999999999999999999999975
|
This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D .... |
| >PRK12309 transaldolase/EF-hand domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00012 Score=82.84 Aligned_cols=70 Identities=23% Similarity=0.214 Sum_probs=54.0
Q ss_pred cHHHHHHHHHH--hccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCC
Q 002711 198 TKSELRGFWEQ--ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLG 275 (889)
Q Consensus 198 d~~EF~~~~~~--~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG 275 (889)
..++++..... -+....++.++.+|++||+|+||.|+.+|+.. ++.+|..+|.|+||
T Consensus 314 ~L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~---------------------~~~~F~~~D~d~DG 372 (391)
T PRK12309 314 TLEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG---------------------SDAVFDALDLNHDG 372 (391)
T ss_pred HHHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH---------------------HHHHHHHhCCCCCC
Confidence 34445443222 23345678899999999999999999999832 13389999999999
Q ss_pred cccHHHHHHHHHh
Q 002711 276 YIELYNLEMLLLQ 288 (889)
Q Consensus 276 ~Is~~EF~~~l~~ 288 (889)
.|+++||.+.+..
T Consensus 373 ~Is~eEf~~~~~~ 385 (391)
T PRK12309 373 KITPEEMRAGLGA 385 (391)
T ss_pred CCcHHHHHHHHHH
Confidence 9999999998864
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00018 Score=64.99 Aligned_cols=65 Identities=17% Similarity=0.280 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhCCCCCC-cccHHHHHHHHHHh-----ccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhh
Q 002711 179 ASELFDALARRRGLTSS-SITKSELRGFWEQI-----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G-~Id~~EF~~~~~~~-----~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~ 245 (889)
+.++|+.+++.|++ | +|+.+||..++... .....++.+..+++.+|+|+||.|+.+||..++...
T Consensus 12 ~~~~F~~~dd~dgd--g~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 12 LIRIFHNYSGKEGD--RYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHccCCC--CCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45668877766553 7 59999999998652 333466789999999999999999999999988643
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00017 Score=71.60 Aligned_cols=66 Identities=20% Similarity=0.295 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhc-ccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASA-NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 216 e~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~-~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.....+|+.||.|.||+|+..||+.+|...... ..+ -.+.||+++|-|.||+|||-||.-+....-
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL---------~lK~mikeVded~dgklSfreflLIfrkaa 165 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHL---------GLKNMIKEVDEDFDGKLSFREFLLIFRKAA 165 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhH---------HHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence 357789999999999999999999999643221 122 245699999999999999999998887644
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00022 Score=63.57 Aligned_cols=64 Identities=19% Similarity=0.377 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhCCCCCC-cccHHHHHHHHHH-----hccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 179 ASELFDALARRRGLTSS-SITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G-~Id~~EF~~~~~~-----~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
..++|+.+++.++ +| .|+.+||..++.. +.....++.+..+++.+|+|+||.|+.+||..++..
T Consensus 10 l~~aF~~fD~~dg--dG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 10 LIDVFHQYSGREG--DKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHhcccCC--CcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4667776554444 48 5999999999987 666667788999999999999999999999888863
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00015 Score=73.72 Aligned_cols=93 Identities=18% Similarity=0.296 Sum_probs=64.5
Q ss_pred HHHHHHHcccCCCc-cchhhhcccccC---CCC-HHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc-CC------h
Q 002711 147 EVEKRFDELAVDGM-LPKSSFGQCIGM---NES-KDFASELFDALARRRGLTSSSITKSELRGFWEQITD-QS------F 214 (889)
Q Consensus 147 ~l~~~F~~ld~dG~-Ls~~ef~~~lg~---~~~-~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-~~------~ 214 (889)
++-++|... ++|. |+.++|...+.. ... +....=.|+++|. +++|.|+.+|+..++..+.. .. .
T Consensus 70 rI~~~f~~~-~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~---~~~G~I~reel~~iv~~~~~~~~~~~~e~~ 145 (187)
T KOG0034|consen 70 RIIDRFDTD-GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDL---DGDGFISREELKQILRMMVGENDDMSDEQL 145 (187)
T ss_pred HHHHHHhcc-CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcC---CCCCcCcHHHHHHHHHHHHccCCcchHHHH
Confidence 344444432 5555 999999998843 122 2234445554333 33499999999999987533 22 2
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
++.+...|..+|.|+||+|+.+|+.+++.
T Consensus 146 ~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 146 EDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 34578889999999999999999999995
|
|
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00024 Score=57.33 Aligned_cols=60 Identities=23% Similarity=0.384 Sum_probs=50.1
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl 242 (889)
..+|..++ . +++|.|+++||..++........++.++.+|+.+|.|++|.|+.+|+..++
T Consensus 3 ~~~f~~~d-~--~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 3 REAFRLFD-K--DGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHhC-C--CCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 45666443 2 335999999999999988878888999999999999999999999998765
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00017 Score=63.99 Aligned_cols=68 Identities=13% Similarity=0.163 Sum_probs=49.5
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
-|-..|..|-. +.|.+++.||+++|...... -+.... -.+.++.+|+.+|.|+||.|+|+||..++..
T Consensus 9 ~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~-~l~~~~--d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 9 KMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSE-FLKNQN--DPMAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHH-HHcCCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 35567888873 35699999999999742211 111111 1556788999999999999999999998864
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00028 Score=62.99 Aligned_cols=65 Identities=25% Similarity=0.238 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHH-hccCChH-HHHHHHHHHhcCCCCceeeHHHHHHHHHhh
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-ITDQSFD-ARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~~~~~e-e~l~~aF~~~Dkd~dG~It~eEl~~vl~~~ 245 (889)
..+.|..++.. +++|+|+.+||...+.. +.....+ +.++.+|+..|.|+||.|+.+||..+|...
T Consensus 10 l~~~F~~fd~~--~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 10 LVSNFHKASVK--GGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHhCC--CCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 45677765553 33599999999999988 6654445 789999999999999999999999988643
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >COG2717 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00062 Score=69.51 Aligned_cols=124 Identities=17% Similarity=0.170 Sum_probs=85.9
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhcccccccccCcccccCccCccCCCCCCcccccccccchhHHHHHHHHHHHHHH
Q 002711 414 DDNINFHKVIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRPDDYWWFVKGTEGWTGVVMVVLMAISYT 493 (889)
Q Consensus 414 d~~~~fHr~ig~~~~~~~~lH~~~~l~~~f~~~~~~~~~~~~~l~~~~~~~~~~~yw~~~~~~~g~tG~i~lv~~~i~~~ 493 (889)
...+.+-|.+|.++++++++|...|+..|- +++ +...+.+ .........|++++++|..+.+
T Consensus 71 ~~l~~~Rr~LGl~af~~~~lH~~~Y~~~~l---------~~~-~~~~~~d--------~~~rpyitiG~iaflll~pLal 132 (209)
T COG2717 71 PKLIRIRRALGLWAFFYALLHFTAYLVLDL---------GLD-LALLGLD--------LLKRPYITIGMIAFLLLIPLAL 132 (209)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcc-HHHhhHH--------HHHhHHHHHHHHHHHHHHHHHH
Confidence 345679999999999999999999876521 111 1111111 1112234569999999999999
Q ss_pred hhhhhHhhccCCchhhhhccccchhHHHHHHHHHHHHHHHHHHhhhhhhccccccceehhhhhhhhhhHhHHHHHHHH
Q 002711 494 LAQPWFRRNRLNLPKILKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAF 571 (889)
Q Consensus 494 ~s~~~~Rr~~~~~~~~~~~~~~ye~F~~~H~l~~i~~vll~~H~~~~~l~~~w~~~~~w~y~~~~~~l~~~drl~R~~ 571 (889)
+|..++||+. + ..|...|.+..+++++..+|-.+.. .. ....++.|.++ .+.|.+.|+.+..
T Consensus 133 TS~k~~~rrl-----------G-~rW~~LHrLvYl~~~L~~lH~~~s~--K~-~~~~~vlY~ii-~~~lll~R~~k~~ 194 (209)
T COG2717 133 TSFKWVRRRL-----------G-KRWKKLHRLVYLALILGALHYLWSV--KI-DMPEPVLYAII-FAVLLLLRVTKTR 194 (209)
T ss_pred HhhHHHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHHHHhc--Cc-cchHHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999984 6 7888999999999999999976521 11 12234566544 4567777877665
|
|
| >PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00011 Score=51.82 Aligned_cols=27 Identities=44% Similarity=0.623 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+++.+|+.||+|+||+|+.+||+.+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578999999999999999999999986
|
... |
| >PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00014 Score=48.62 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCCCceeeHHHHHHHH
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 218 l~~aF~~~Dkd~dG~It~eEl~~vl 242 (889)
|+.+|+.+|+|+||.||.+|++.++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 5779999999999999999999864
|
... |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00039 Score=62.57 Aligned_cols=66 Identities=21% Similarity=0.397 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHhhCCCCCC-cccHHHHHHHHHH-hcc----CChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 177 DFASELFDALARRRGLTSS-SITKSELRGFWEQ-ITD----QSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G-~Id~~EF~~~~~~-~~~----~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
+.+.+.|+.+|+.++ +| .|+.+||..++.. ++. ...++.++.+|+.+|.|++|.|+.+||..++..
T Consensus 9 ~~l~~~F~~fDd~dg--~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 9 ETLINVFHAHSGKEG--DKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHhcccC--CCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 446778887664555 49 5999999999965 322 345778999999999999999999999988864
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00019 Score=79.30 Aligned_cols=127 Identities=13% Similarity=0.269 Sum_probs=82.8
Q ss_pred HHHHHHccc-C-CCccchhhhcccc----cCCC--CHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHH
Q 002711 148 VEKRFDELA-V-DGMLPKSSFGQCI----GMNE--SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLE 219 (889)
Q Consensus 148 l~~~F~~ld-~-dG~Ls~~ef~~~l----g~~~--~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~ 219 (889)
++-.|..+| + +|.|+..+|++.+ +.+. ......++-+-+.+. +-.|+++||.++..-+.+...-+
T Consensus 320 l~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~----~~gISl~Ef~~Ff~Fl~~l~dfd--- 392 (489)
T KOG2643|consen 320 LELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD----GKGISLQEFKAFFRFLNNLNDFD--- 392 (489)
T ss_pred HHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC----CCCcCHHHHHHHHHHHhhhhHHH---
Confidence 344688888 4 4899999998876 2221 112334444422221 35799999988876655433222
Q ss_pred HHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 220 TFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 220 ~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
.|..+| ....+.|+..|++.+..... +..|+ +.+++.+|.-+|.|+||.++++||..+|++.
T Consensus 393 ~Al~fy-~~Ag~~i~~~~f~raa~~vt-GveLS------dhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 393 IALRFY-HMAGASIDEKTFQRAAKVVT-GVELS------DHVVDVVFTIFDENNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred HHHHHH-HHcCCCCCHHHHHHHHHHhc-Ccccc------cceeeeEEEEEccCCCCcccHHHHHHHHHHH
Confidence 233333 23567899999998886432 22333 4567779999999999999999999999863
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00063 Score=61.46 Aligned_cols=64 Identities=22% Similarity=0.410 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHH-h----ccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-I----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~----~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
..+.|+.+|+.++ ++|.|+.+|+..++.. . .....++.++.+|+.+|.|++|.|+.+||..++.
T Consensus 10 l~~~F~~~D~~dg-~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 10 LILTFHRYAGKDG-DKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHhccCC-CCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4566776665332 1399999999999875 2 3345678899999999999999999999998886
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0015 Score=61.64 Aligned_cols=108 Identities=19% Similarity=0.173 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCC--CCceeeHHHHHHHHHhhhhcccch
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKN--LDGRITEEEVKEIIALSASANKLS 252 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd--~dG~It~eEl~~vl~~~~~~~~l~ 252 (889)
..+...++|..+|.. + +|+|++.+--+.+..++....++.+.+.-..++++ +--+|+.|++--++..... |+
T Consensus 9 ~~~e~ke~F~lfD~~-g--D~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak-nk-- 82 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRT-G--DGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK-NK-- 82 (152)
T ss_pred hHHHHHHHHHHHhcc-C--cccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh-cc--
Confidence 446678999955544 5 49999999999999999999999999999999988 5678999999998875432 22
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 253 KIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 253 ~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+-..+++++. ++.+|++++|.|...|++.+|....
T Consensus 83 -~q~t~edfveg-LrvFDkeg~G~i~~aeLRhvLttlG 118 (152)
T KOG0030|consen 83 -DQGTYEDFVEG-LRVFDKEGNGTIMGAELRHVLTTLG 118 (152)
T ss_pred -ccCcHHHHHHH-HHhhcccCCcceeHHHHHHHHHHHH
Confidence 22234565555 8999999999999999999998643
|
|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00054 Score=57.20 Aligned_cols=59 Identities=22% Similarity=0.366 Sum_probs=47.1
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+++|+.+|.+ ++|.|+.+|+..++...+ ..++.++.+|+.+|.|++|.|+.+|+..++.
T Consensus 2 ~~~F~~~D~~---~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPD---GDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCC---CCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 3567754432 349999999999987763 3677899999999999999999999988875
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0013 Score=59.69 Aligned_cols=61 Identities=15% Similarity=0.267 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
..++|+.+| .+++|.|+++|+..++... +..++.++.+|..+|.|++|.|+.+||..++..
T Consensus 12 l~~~F~~~D---~d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 12 YEQIFRSLD---KNQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHhC---CCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 445555433 3345999999999888764 345678899999999999999999999988863
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.001 Score=62.42 Aligned_cols=59 Identities=22% Similarity=0.299 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHH
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl 242 (889)
..+.-.|..+| .|++|.|+.+|+..+. ....+..+..+|+.+|.|+||.||.+|+...+
T Consensus 48 ~~l~w~F~~lD---~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 48 DPVGWMFNQLD---GNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHC---CCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 33455555433 2334888888877654 23346677889999999999999999998887
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00089 Score=59.74 Aligned_cols=64 Identities=20% Similarity=0.406 Sum_probs=49.3
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHH---hccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQ---ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~---~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
-++|+.++.+++ .+|+|+.+||..++.. ++....++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 13 i~~F~~y~~~~~-~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 13 VAIFHKYSGREG-DKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHccCC-CCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 455665554444 2489999999999863 455567888999999999999999999999888764
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >KOG4065 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00088 Score=60.75 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhh----hcc---cchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHH
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSA----SAN---KLSKIQERVEEYAALIMEELDPHNLGYIELYNLEML 285 (889)
Q Consensus 213 ~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~----~~~---~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~ 285 (889)
++++----.|.|.|.|+||.|+--||...+.-.- ++. .+ ..+.+.+..++.+++.-|.|+||+|+|.||.+.
T Consensus 64 tpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl-~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPL-SSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred CHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCC-CCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 4444444589999999999999999988886311 111 12 235667888999999999999999999999764
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0019 Score=57.74 Aligned_cols=64 Identities=23% Similarity=0.332 Sum_probs=46.8
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHh-----ccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQI-----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~-----~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
..+|...++.+++ .++|+.+||..++... .....++.+..+++.+|.|+||.|+.+|+..++..
T Consensus 12 ~~~F~~y~~~dg~-~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 12 IAVFQKYAGKDGD-SYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHhccCCC-cCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 4455543444442 2489999999988663 23445678889999999999999999999888863
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00063 Score=45.50 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=21.2
Q ss_pred HHHHhcCCCCCCcccHHHHHHHH
Q 002711 264 LIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 264 ~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
.+|+.+|.|+||.|+++||.+++
T Consensus 3 ~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 3 DAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHcCCCCCcCCHHHHHHHC
Confidence 48999999999999999999875
|
... |
| >KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0031 Score=78.16 Aligned_cols=132 Identities=17% Similarity=0.244 Sum_probs=95.4
Q ss_pred CcccHHHHHHHHHccc--CCCccchhhhcccc---cCC-------CCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMN-------ESKDFASELFDALARRRGLTSSSITKSELRGFWEQ 208 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~-------~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~ 208 (889)
+++.+.+..-+|+.+| .+|+|+.++|..|| |.. ..++..+++++++|..+ +|+|+..||.++|..
T Consensus 2248 tEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r---~G~Vsl~dY~afmi~ 2324 (2399)
T KOG0040|consen 2248 TEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNR---DGYVSLQDYMAFMIS 2324 (2399)
T ss_pred CHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCC---cCcccHHHHHHHHHh
Confidence 5677788999999999 89999999999998 221 12345677777555444 499999999999976
Q ss_pred h--ccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCC----CCCcccHHHH
Q 002711 209 I--TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH----NLGYIELYNL 282 (889)
Q Consensus 209 ~--~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d----~dG~Is~~EF 282 (889)
- .+-..++.+..||+..|. +.-+|+++|+..-|. .++++--+..|=.-+|+- -.+.++|.+|
T Consensus 2325 ~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~lt-----------reqaefc~s~m~~~~e~~~~~s~q~~l~y~df 2392 (2399)
T KOG0040|consen 2325 KETENILSSEEIEDAFRALDA-GKPYVTKEELYQNLT-----------REQAEFCMSKMKPYAETSSGRSDQVALDYKDF 2392 (2399)
T ss_pred cccccccchHHHHHHHHHhhc-CCccccHHHHHhcCC-----------HHHHHHHHHHhhhhcccccCCCccccccHHHH
Confidence 2 222345689999999999 888999999866542 133344444455556652 3478999999
Q ss_pred HHHHH
Q 002711 283 EMLLL 287 (889)
Q Consensus 283 ~~~l~ 287 (889)
..-+-
T Consensus 2393 v~sl~ 2397 (2399)
T KOG0040|consen 2393 VNSLF 2397 (2399)
T ss_pred HHHHh
Confidence 88653
|
|
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0031 Score=56.30 Aligned_cols=65 Identities=20% Similarity=0.397 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHH-hccCCh----HHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-ITDQSF----DARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~~~~~----ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
+-++|...+..++ .+|.|+.+||..++.. +..... ++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 10 ~~~~f~~y~~~~~-~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 10 IINVFHQYSVRKG-HPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHhccCC-CcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3455655554443 3589999999998863 333333 788999999999999999999999988864
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.015 Score=55.92 Aligned_cols=97 Identities=20% Similarity=0.250 Sum_probs=74.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHH
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVE 259 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~ 259 (889)
.+-|.++|.++ +|.|+.+++...+..+++...++.|..+++ .+.|-|+..-|-.++...+... ..+
T Consensus 35 KEAF~~mDqnr---DG~IdkeDL~d~~aSlGk~~~d~elDaM~~----Ea~gPINft~FLTmfGekL~gt-------dpe 100 (171)
T KOG0031|consen 35 KEAFNLMDQNR---DGFIDKEDLRDMLASLGKIASDEELDAMMK----EAPGPINFTVFLTMFGEKLNGT-------DPE 100 (171)
T ss_pred HHHHHHHhccC---CCcccHHHHHHHHHHcCCCCCHHHHHHHHH----hCCCCeeHHHHHHHHHHHhcCC-------CHH
Confidence 34455444443 499999999999999998888999998886 5789999887776665322211 126
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHhCC
Q 002711 260 EYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 260 e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
+.+-..|+.+|.+++|.|.-+.++++|....
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g 131 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTTMG 131 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHHhc
Confidence 6777799999999999999999999998743
|
|
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0039 Score=55.42 Aligned_cols=65 Identities=18% Similarity=0.339 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhh-CCCCCCcccHHHHHHHHHH-hcc----CChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 178 FASELFDALARR-RGLTSSSITKSELRGFWEQ-ITD----QSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 178 ~~~~lf~~l~~~-d~~~~G~Id~~EF~~~~~~-~~~----~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
...++|..++.. ++ +|.|+.+||..++.. +.. ...++.+..+|..+|.|++|.|+.+||..++..
T Consensus 9 ~l~~~F~~~D~~~~~--~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 9 TIIDVFHKYSGKEGD--KDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHhhccCC--CCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 356678866653 34 499999999999865 322 124778999999999999999999999998863
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0049 Score=56.67 Aligned_cols=92 Identities=21% Similarity=0.342 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCCc
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQ 292 (889)
Q Consensus 213 ~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~~ 292 (889)
...++-..+|+..|. ++|.|+-++.++++..+ +++ .+....|..-+|.|+||+++++||.-.|.-.-.-
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S----~L~------~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~ 75 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQAREFFMKS----GLP------RDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRK 75 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHT----TSS------HHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHc----CCC------HHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 345677889999985 68999999999998632 344 4556679999999999999999999887632100
Q ss_pred ccccccchhhhhhhhhhccCCCCCCC
Q 002711 293 SANLLTDSRVLSQMLSQRLVPTKDRN 318 (889)
Q Consensus 293 ~~~~~~~~~~l~~~~s~~l~~~~~~~ 318 (889)
..+....++..+...|.|+..+.
T Consensus 76 ---~~~~~~~lP~~LP~~L~p~s~~~ 98 (104)
T PF12763_consen 76 ---LNGNGKPLPSSLPPSLIPPSKRP 98 (104)
T ss_dssp ---HHHTTS---SSSSGGGSSSCG--
T ss_pred ---hcCCCCCCchhcCHHHCCCCccc
Confidence 01223456667777777765543
|
... |
| >PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.003 Score=59.10 Aligned_cols=73 Identities=21% Similarity=0.122 Sum_probs=47.3
Q ss_pred HHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHH
Q 002711 202 LRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYN 281 (889)
Q Consensus 202 F~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~E 281 (889)
............-...+...|..+|.|+||.++..||+.+....... +.-+...++..|.|+||.||+.|
T Consensus 40 ~~~~~~~~~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~----------e~C~~~F~~~CD~n~d~~Is~~E 109 (113)
T PF10591_consen 40 LLKRDESSSYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMPP----------EHCARPFFRSCDVNKDGKISLDE 109 (113)
T ss_dssp HHHHHHHHTGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTSTT----------GGGHHHHHHHH-TT-SSSEEHHH
T ss_pred ccccccccchhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhhh----------HHHHHHHHHHcCCCCCCCCCHHH
Confidence 33333333444556778999999999999999999999876522111 12234589999999999999999
Q ss_pred HHH
Q 002711 282 LEM 284 (889)
Q Consensus 282 F~~ 284 (889)
+..
T Consensus 110 W~~ 112 (113)
T PF10591_consen 110 WCN 112 (113)
T ss_dssp HHH
T ss_pred Hcc
Confidence 864
|
SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B. |
| >PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0062 Score=47.78 Aligned_cols=48 Identities=21% Similarity=0.330 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 196 SITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 196 ~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+++|+|...++..+.-...++.+..+|+.+|++++|++..+|+.++.+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 368899999998888888899999999999999999999999999886
|
... |
| >KOG4251 consensus Calcium binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.003 Score=64.59 Aligned_cols=70 Identities=20% Similarity=0.317 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
.+++..+|...|.|.||+||..|+++.++..... .+.+ +.+..+.-|+.+|+|+||.|+++||+--+...
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwImektaE-Hfqe----ameeSkthFraVDpdgDGhvsWdEykvkFlas 169 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAE-HFQE----AMEESKTHFRAVDPDGDGHVSWDEYKVKFLAS 169 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHHHHHH-HHHH----HHhhhhhheeeeCCCCCCceehhhhhhHHHhh
Confidence 4679999999999999999999999988632211 1211 22334457888999999999999998755543
|
|
| >KOG4251 consensus Calcium binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0023 Score=65.48 Aligned_cols=131 Identities=11% Similarity=0.008 Sum_probs=84.8
Q ss_pred HHHHHHHHccc--CCCccchhhhcccccCCCC------HHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHH-
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCIGMNES------KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDA- 216 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Ls~~ef~~~lg~~~~------~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee- 216 (889)
+.+..+|.+.| .||.|+..|+++-+-.+.. .+..+-.|++ .|.+++|.|+++||.--.......+..+
T Consensus 101 rklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFra---VDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRA---VDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheee---eCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 46788999999 7999999999887722211 1112223332 3455569999999975443332211111
Q ss_pred -------------HHHHHHHHhcCCCCceeeH---------HHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCC
Q 002711 217 -------------RLETFFDMVDKNLDGRITE---------EEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNL 274 (889)
Q Consensus 217 -------------~l~~aF~~~Dkd~dG~It~---------eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~d 274 (889)
.=.+.|.--|+|.+|..+. +|+-.++--..+ ..-+...++.|+..+|+|||
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhS-------rgmLrfmVkeivrdlDqdgD 250 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS-------RGMLRFMVKEIVRDLDQDGD 250 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh-------hhhHHHHHHHHHHHhccCCC
Confidence 1234566667777777665 887777632111 12246678889999999999
Q ss_pred CcccHHHHHHHH
Q 002711 275 GYIELYNLEMLL 286 (889)
Q Consensus 275 G~Is~~EF~~~l 286 (889)
..++..||+.+.
T Consensus 251 kqlSvpeFislp 262 (362)
T KOG4251|consen 251 KQLSVPEFISLP 262 (362)
T ss_pred eeecchhhhcCC
Confidence 999999998754
|
|
| >PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0096 Score=46.75 Aligned_cols=48 Identities=23% Similarity=0.403 Sum_probs=37.4
Q ss_pred eeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHH
Q 002711 232 RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 232 ~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
+++.+|++.+++.... .++ ++|+..+|+++|.+++|.++.+||+.+..
T Consensus 1 kmsf~Evk~lLk~~NI--~~~------~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNI--EMD------DEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT------------HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcc--CcC------HHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 4788999999984321 222 78999999999999999999999998765
|
... |
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0089 Score=53.24 Aligned_cols=30 Identities=17% Similarity=0.240 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 214 ~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
..+-+..+|+..|.|+||.|+.+|+..++.
T Consensus 46 d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 46 DPMAVDKIMKDLDDCRDGKVGFQSFFSLIA 75 (91)
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 344555555555666666666555555554
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0057 Score=43.09 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=22.7
Q ss_pred HHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 263 ALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 263 ~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..+|+.+|.|+||+|+.+||..+|.+
T Consensus 3 ~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 3 REAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 45899999999999999999999974
|
... |
| >PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.011 Score=54.42 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=26.5
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 195 SSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 195 G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
|.|+-++-..++... +.+.+.|..++++.|.|+||+++.+||.-+|.+
T Consensus 24 g~isg~~a~~~f~~S--~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 24 GKISGDQAREFFMKS--GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp TEEEHHHHHHHHHHT--TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CeEeHHHHHHHHHHc--CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 555555555444322 334456666666666666666666666655553
|
... |
| >COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=1.6 Score=46.73 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=83.7
Q ss_pred ccccEEEEEEEEecCCEEEEEEecCCCCc----cCCccEEEEEEcCCCC--------------------Ccccceeeeec
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQGFK----YTSGQYIFVNCAAVSQ--------------------FQWHPFSITSA 629 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~l~~~~p~~~~----~~pGQyv~l~~p~is~--------------------~e~HPFTIaSa 629 (889)
..+.++|+.+..++.+.++++|..|.... ...+||+.|-+|..+. .-.++|||.+.
T Consensus 16 ~~~~~~V~~~~~lsP~m~Rv~~~g~~l~~f~~~~~~d~~ikL~fp~~~~~~~~~~~~~~~~~~~~~~~r~~~R~YTiR~~ 95 (265)
T COG2375 16 RLHEATVTRVTQLSPHMVRVVLGGEGLAGFASLGFGDQHIKLFFPPPDGDPPRLPVLEERGAVPPGAQRPPQRTYTIRAV 95 (265)
T ss_pred cceEEEEEEEEecCCCeEEEEEecccccccccccCCCceeEEEecCccCCCCCCcccccccccCccccCCCcccceeeee
Confidence 34578889999999999999999876433 3444599999986421 12677888654
Q ss_pred -CCCCceEEEEEecCcchHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCCCCCCCCCCEEEEEEc
Q 002711 630 -PGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGL 708 (889)
Q Consensus 630 -P~~~~l~l~Ir~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~~~~~~~~~~vllVag 708 (889)
++...+.+=+=..| +.|..|.|-+ ..++|+ ++.|-||=|... ....++..+|+|=
T Consensus 96 d~~~~e~~vDfVlH~----------------~~gpas~WA~-~a~~GD------~l~i~GP~g~~~-p~~~~~~~lLigD 151 (265)
T COG2375 96 DAAAGELDVDFVLHG----------------EGGPASRWAR-TAQPGD------TLTIMGPRGSLV-PPEAADWYLLIGD 151 (265)
T ss_pred cccccEEEEEEEEcC----------------CCCcchhhHh-hCCCCC------EEEEeCCCCCCC-CCCCcceEEEecc
Confidence 33343333222221 1122222221 234787 899999999954 3456889999998
Q ss_pred CcchhhHHHHHHHH
Q 002711 709 GIGATPLISIIKDV 722 (889)
Q Consensus 709 GiGITP~lsil~~l 722 (889)
=+++..+..||..+
T Consensus 152 etAlPAIa~iLE~l 165 (265)
T COG2375 152 ETALPAIARILETL 165 (265)
T ss_pred ccchHHHHHHHHhC
Confidence 99999999988876
|
|
| >PF14658 EF-hand_9: EF-hand domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.023 Score=47.35 Aligned_cols=59 Identities=17% Similarity=0.337 Sum_probs=50.7
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHHHHhcCCCC-ceeeHHHHHHHHH
Q 002711 182 LFDALARRRGLTSSSITKSELRGFWEQITD-QSFDARLETFFDMVDKNLD-GRITEEEVKEIIA 243 (889)
Q Consensus 182 lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-~~~ee~l~~aF~~~Dkd~d-G~It~eEl~~vl~ 243 (889)
.|+++|..+. |.|.-.+++.++..+.. ...|++|+.+-+.+|.++. |.|+.++|..+|+
T Consensus 3 ~F~~fD~~~t---G~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 3 AFDAFDTQKT---GRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred chhhcCCcCC---ceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 5775555544 99999999999999877 7778899999999999998 9999999999885
|
|
| >PRK12309 transaldolase/EF-hand domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.011 Score=66.98 Aligned_cols=57 Identities=33% Similarity=0.477 Sum_probs=44.6
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 171 GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 171 g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
|....+..+..+|..+ |.++ +|.|+.+||.. +..+|+.+|.|+||.|+.+||+++++
T Consensus 328 ~~~~~~~~l~~aF~~~-D~dg--dG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 328 GGEAFTHAAQEIFRLY-DLDG--DGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred ccChhhHHHHHHHHHh-CCCC--CCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 4444556677888853 3333 49999999952 46789999999999999999999986
|
|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.024 Score=64.26 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=54.4
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
.++..|...| |++|+||..|+..+++...... .-..+++++.++.+.++|.+|.|+||||..++..-
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~-----g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL-----GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc-----cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 5788899999 9999999999999997422211 22346778889999999999999999999977654
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.025 Score=62.75 Aligned_cols=65 Identities=23% Similarity=0.361 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc----cCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHh
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQIT----DQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~----~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~ 244 (889)
...+.+|.++|.++ +|.|+.+||.++|..++ ....++.+-..=++.|.|+||.|+.+||-+++.+
T Consensus 547 s~LetiF~~iD~D~---SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 547 SSLETIFNIIDADN---SGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hhHHHHHHHhccCC---CCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 34677888766544 49999999999997753 3446778888889999999999999999998874
|
|
| >KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.031 Score=69.83 Aligned_cols=73 Identities=21% Similarity=0.404 Sum_probs=56.4
Q ss_pred HHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCCc
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQE-RVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQ 292 (889)
Q Consensus 218 l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~-~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~~ 292 (889)
...+|+.||++.+|.++.++|+.+++... ..++..++ +.+-..+.+|.-+||+.+|+|+..||...|-.+.+.
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslg--Y~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETe 2328 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLG--YDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETE 2328 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcC--CCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccc
Confidence 35679999999999999999999998532 22322211 123356679999999999999999999999887654
|
|
| >KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.24 Score=60.42 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=54.9
Q ss_pred CCCccchhhhcccccCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh---c-----cCChHHHHHHHHHHhcCC
Q 002711 157 VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI---T-----DQSFDARLETFFDMVDKN 228 (889)
Q Consensus 157 ~dG~Ls~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~---~-----~~~~ee~l~~aF~~~Dkd 228 (889)
++| ++.+||. ... ...+...+-+|+..|. ++|.++.+|+.+..... . ....++.....|+..|.+
T Consensus 1 ~~~-~~~~~~~-~~~-~~~d~~l~~~f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (646)
T KOG0039|consen 1 GEG-ISFQELK-ITD-CSYDDKLQTFFDMYDK----GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPD 73 (646)
T ss_pred CCC-cchhhhc-ccC-CChhHHHHHHHHHHhh----hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcccc
Confidence 357 8888888 222 2234556667774443 34899999988876542 1 122345567789999999
Q ss_pred CCceeeHHHHHHHHH
Q 002711 229 LDGRITEEEVKEIIA 243 (889)
Q Consensus 229 ~dG~It~eEl~~vl~ 243 (889)
+.|++..+++.-++.
T Consensus 74 ~~~y~~~~~~~~ll~ 88 (646)
T KOG0039|consen 74 HKGYITNEDLEILLL 88 (646)
T ss_pred ccceeeecchhHHHH
Confidence 999999999988875
|
|
| >KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.038 Score=58.62 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=62.1
Q ss_pred cHHHHHHHHHHhccCChHH-HHHHHHHHhcCCCCceeeHHHHHHHHHhhh-----hccc---chhhHHHHHHHHHHHHHh
Q 002711 198 TKSELRGFWEQITDQSFDA-RLETFFDMVDKNLDGRITEEEVKEIIALSA-----SANK---LSKIQERVEEYAALIMEE 268 (889)
Q Consensus 198 d~~EF~~~~~~~~~~~~ee-~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~-----~~~~---l~~~~~~~~e~~~~i~~e 268 (889)
+.+++.++|...-...++. .-+.+|.+.|.|+||+++..||..++.... ..|. +.+-+++.-..-+.+|++
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~ 304 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQ 304 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 4677888887643333322 357899999999999999999999886422 1121 111122222335678999
Q ss_pred cCCCCCCcccHHHHHHHHH
Q 002711 269 LDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 269 ~D~d~dG~Is~~EF~~~l~ 287 (889)
+|.|.|--||.+||.+--.
T Consensus 305 vDtNqDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 305 VDTNQDRLVTLEEFLNDTD 323 (442)
T ss_pred cccchhhhhhHHHHHhhhh
Confidence 9999999999999987554
|
|
| >smart00054 EFh EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.045 Score=36.28 Aligned_cols=26 Identities=38% Similarity=0.649 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 218 l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
++.+|+.+|.|++|.|+.+||..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 57799999999999999999998875
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. |
| >smart00054 EFh EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.051 Score=36.00 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=23.3
Q ss_pred HHHHHhcCCCCCCcccHHHHHHHHHh
Q 002711 263 ALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 263 ~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
..+|+.+|.|++|.|+++||..++..
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 44899999999999999999998864
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. |
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.061 Score=51.23 Aligned_cols=93 Identities=19% Similarity=0.180 Sum_probs=63.1
Q ss_pred HHHHHHHcccCCCccchhhhccccc----CCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccC-ChHHH----
Q 002711 147 EVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ-SFDAR---- 217 (889)
Q Consensus 147 ~l~~~F~~ld~dG~Ls~~ef~~~lg----~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~-~~ee~---- 217 (889)
++-+.|.+ |++|.++.++|...+. |.+....+.--|.+ -+. ++++.|-.+++...+..+.+. ..+++
T Consensus 75 ri~e~FSe-DG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkI-YDf--d~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i 150 (189)
T KOG0038|consen 75 RICEVFSE-DGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKI-YDF--DGDEFIGHDDLEKTLTSLTRDELSDEEVELI 150 (189)
T ss_pred HHHHHhcc-CCCCcccHHHHHHHHHHHHhhChHHhhhhheeEE-eec--CCCCcccHHHHHHHHHHHhhccCCHHHHHHH
Confidence 44566653 4899999999988873 33332223333332 223 335899999998888775443 22333
Q ss_pred HHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 218 l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
+....+.-|.||||+|+..|+..++.
T Consensus 151 ~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 151 CEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 46667888999999999999999985
|
|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.14 Score=57.82 Aligned_cols=86 Identities=19% Similarity=0.256 Sum_probs=66.4
Q ss_pred HHHHHHccc--CCCccchhhhcccccCC---------CCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHH
Q 002711 148 VEKRFDELA--VDGMLPKSSFGQCIGMN---------ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDA 216 (889)
Q Consensus 148 l~~~F~~ld--~dG~Ls~~ef~~~lg~~---------~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee 216 (889)
.+..|+.+| ++|.++.+++++.++.. -+.+++...|.. ... -.++|.||.+++-.+ .+|
T Consensus 110 ~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~---~~~---r~~ny~~f~Q~lh~~----~~E 179 (694)
T KOG0751|consen 110 FEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGD---IRK---RHLNYAEFTQFLHEF----QLE 179 (694)
T ss_pred HHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhh---HHH---HhccHHHHHHHHHHH----HHH
Confidence 456777777 88999999999887432 234667776662 222 468899999888654 367
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHH
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~ 243 (889)
..+++|+..|+.++|+||.=+++.+|-
T Consensus 180 ~~~qafr~~d~~~ng~is~Ldfq~imv 206 (694)
T KOG0751|consen 180 HAEQAFREKDKAKNGFISVLDFQDIMV 206 (694)
T ss_pred HHHHHHHHhcccCCCeeeeechHhhhh
Confidence 789999999999999999999999885
|
|
| >KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.53 Score=47.51 Aligned_cols=95 Identities=19% Similarity=0.253 Sum_probs=57.2
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHH
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVE 259 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~ 259 (889)
..+|..+|.+ .||+||+.|+..+|..++-....--++.+.+.+|-|.||+||.-|+--+....+.. .+.. +
T Consensus 102 ~~~Fk~yDe~---rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaag-EL~~-----d 172 (244)
T KOG0041|consen 102 ESMFKQYDED---RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAG-ELQE-----D 172 (244)
T ss_pred HHHHHHhccc---ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhcc-cccc-----c
Confidence 4455533333 34888888888888777665555667778888888888888888877776643321 2222 1
Q ss_pred HHHHH--HHHhcCCCCCCcccHHHHH
Q 002711 260 EYAAL--IMEELDPHNLGYIELYNLE 283 (889)
Q Consensus 260 e~~~~--i~~e~D~d~dG~Is~~EF~ 283 (889)
..... =..++|....|.---..|-
T Consensus 173 s~~~~LAr~~eVDVskeGV~GAknFF 198 (244)
T KOG0041|consen 173 SGLLRLARLSEVDVSKEGVSGAKNFF 198 (244)
T ss_pred hHHHHHHHhcccchhhhhhhhHHHHH
Confidence 11111 1456777766665555543
|
|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.23 E-value=1.1 Score=53.99 Aligned_cols=151 Identities=14% Similarity=0.213 Sum_probs=102.1
Q ss_pred HHHHhcccccccccc-----CcccHHHHHHHHHccc--CCCccchhhhccccc---CCCCHHHHHHHHHHHHhhCCCCCC
Q 002711 126 AARALKGLKFITKNV-----GTEGWGEVEKRFDELA--VDGMLPKSSFGQCIG---MNESKDFASELFDALARRRGLTSS 195 (889)
Q Consensus 126 ~~~al~~L~~i~~~~-----~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg---~~~~~~~~~~lf~~l~~~d~~~~G 195 (889)
++.=.+||+.+.... ....-.++...|+..| ++|.++.++...++. +......+..+|...+ ..+++
T Consensus 111 a~~wV~gl~~l~s~~~~~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~---~~~~~ 187 (746)
T KOG0169|consen 111 ANIWVSGLRKLISRSKSMRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESD---NSQTG 187 (746)
T ss_pred HHHHhhhHHHHHhccchhhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHH---hhccc
Confidence 344455555554321 2233357999999999 899999999888773 2234556777777542 22359
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCC---
Q 002711 196 SITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH--- 272 (889)
Q Consensus 196 ~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d--- 272 (889)
.+..++|..+-....... .+..+|..+-.+ .+.++.++|.+++.......... .+.++.|++++..-
T Consensus 188 k~~~~~~~~~~~~~~~rp---ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~------~~~ae~ii~~~e~~k~~ 257 (746)
T KOG0169|consen 188 KLEEEEFVKFRKELTKRP---EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGAT------LDEAEEIIERYEPSKEF 257 (746)
T ss_pred eehHHHHHHHHHhhccCc---hHHHHHHHHhCC-CCccCHHHHHHHHHHhccccccc------HHHHHHHHHHhhhhhhc
Confidence 999999999877665433 677788877555 89999999999998543332222 34455566665432
Q ss_pred -CCCcccHHHHHHHHHhC
Q 002711 273 -NLGYIELYNLEMLLLQA 289 (889)
Q Consensus 273 -~dG~Is~~EF~~~l~~~ 289 (889)
..+.++++.|...|...
T Consensus 258 ~~~~~l~ldgF~~yL~S~ 275 (746)
T KOG0169|consen 258 RRHGLLSLDGFTRYLFSP 275 (746)
T ss_pred cccceecHHHHHHHhcCc
Confidence 44679999999988754
|
|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.81 Score=54.45 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=95.7
Q ss_pred CcccHHHHHHHHHccc-CCCccchhhhcccc-cCCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc--------
Q 002711 141 GTEGWGEVEKRFDELA-VDGMLPKSSFGQCI-GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-------- 210 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld-~dG~Ls~~ef~~~l-g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-------- 210 (889)
+.+|-..-.+.|..|. +.|.|+-++-+.++ .......-..+|.. |.|.|. ||.+|-.||.-+|..+.
T Consensus 11 T~~Er~K~~~qF~~Lkp~~gfitg~qArnfflqS~LP~~VLaqIWA-LsDldk--DGrmdi~EfSIAmkLi~lkLqG~~l 87 (1118)
T KOG1029|consen 11 TDEERQKHDAQFGQLKPGQGFITGDQARNFFLQSGLPTPVLAQIWA-LSDLDK--DGRMDIREFSIAMKLIKLKLQGIQL 87 (1118)
T ss_pred chHHHHHHHHHHhccCCCCCccchHhhhhhHHhcCCChHHHHHHHH-hhhcCc--cccchHHHHHHHHHHHHHHhcCCcC
Confidence 4456566777888888 88999988877766 11122345677777 676666 49999999988775431
Q ss_pred ------------------------------------------------------------------cC------------
Q 002711 211 ------------------------------------------------------------------DQ------------ 212 (889)
Q Consensus 211 ------------------------------------------------------------------~~------------ 212 (889)
.+
T Consensus 88 P~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~ 167 (1118)
T KOG1029|consen 88 PPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPH 167 (1118)
T ss_pred CCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 00
Q ss_pred ------------------------ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHh
Q 002711 213 ------------------------SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEE 268 (889)
Q Consensus 213 ------------------------~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e 268 (889)
...-+.++.|+..|+..+|++|-..-+.+|..+ +|+ ....+.|-.-
T Consensus 168 ~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS----~Lp------q~~LA~IW~L 237 (1118)
T KOG1029|consen 168 DSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQS----GLP------QNQLAHIWTL 237 (1118)
T ss_pred CcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhc----CCc------hhhHhhheee
Confidence 001256789999999999999999988888532 233 3345568888
Q ss_pred cCCCCCCcccHHHHHHHHH
Q 002711 269 LDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 269 ~D~d~dG~Is~~EF~~~l~ 287 (889)
.|.|+||+++-|||.-.|.
T Consensus 238 sDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 238 SDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred eccCCCCcccHHHHHHHHH
Confidence 9999999999999986553
|
|
| >KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.22 Score=56.85 Aligned_cols=76 Identities=12% Similarity=0.210 Sum_probs=54.2
Q ss_pred cccccccCcccHHHHHHHHHccc-CCCccchhhhccccc---CCCCHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh
Q 002711 134 KFITKNVGTEGWGEVEKRFDELA-VDGMLPKSSFGQCIG---MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI 209 (889)
Q Consensus 134 ~~i~~~~~~~~~~~l~~~F~~ld-~dG~Ls~~ef~~~lg---~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~ 209 (889)
.....+.+.+|+.++++.|.++| ++|+++..|+..++. ......-.+++-+++...+.+.+|.|+|+||+..+..+
T Consensus 7 ~~~~~~~tq~El~~l~~kF~~~d~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 7 PWLQSQLTQEELRELKEKFNKLDDQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred hhhcccccHHHHHHHHHHHHhhcCCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 33445678899999999999999 999999999988873 21111122344444555556667999999999865443
|
|
| >KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=91.17 E-value=0.35 Score=54.67 Aligned_cols=129 Identities=12% Similarity=0.190 Sum_probs=77.9
Q ss_pred HHHHHHHccc--CCCccchhhhcccc---cCC--C--------CH----HHHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 002711 147 EVEKRFDELA--VDGMLPKSSFGQCI---GMN--E--------SK----DFASELFDALARRRGLTSSSITKSELRGFWE 207 (889)
Q Consensus 147 ~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~--~--------~~----~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~ 207 (889)
.+++.|--++ ..|.|+..|+..+. .+. . .. +....++..+-.-|.|.+|.|+.+++..+-.
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d 305 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD 305 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhc
Confidence 5677888787 89999999886653 000 0 00 1112222222333455568888888776654
Q ss_pred HhccCChHHHHHHHHH----HhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHH
Q 002711 208 QITDQSFDARLETFFD----MVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLE 283 (889)
Q Consensus 208 ~~~~~~~ee~l~~aF~----~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~ 283 (889)
... .+--+..+|. .+=.-.+|+++.+++..++-.. .++-+ ..-++-.|+-+|.|+||.++.+|..
T Consensus 306 ~tl---t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~--e~k~t------~~SleYwFrclDld~~G~Lt~~el~ 374 (493)
T KOG2562|consen 306 HTL---TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAE--EDKDT------PASLEYWFRCLDLDGDGILTLNELR 374 (493)
T ss_pred cch---hhHHHHHHHhhccccceeeecCcccHHHHHHHHHHh--ccCCC------ccchhhheeeeeccCCCcccHHHHH
Confidence 321 2334667777 4445567889888888877421 11111 2234557999999999999988766
Q ss_pred HHH
Q 002711 284 MLL 286 (889)
Q Consensus 284 ~~l 286 (889)
-+-
T Consensus 375 ~fy 377 (493)
T KOG2562|consen 375 YFY 377 (493)
T ss_pred HHH
Confidence 443
|
|
| >PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.44 Score=41.72 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=46.9
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCC----CCCcccHHHHHHHHHhCC
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH----NLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d----~dG~Is~~EF~~~l~~~p 290 (889)
.++.+|+.|-. +.+.||.++|...|...-....++ ++.++.+|+.+.++ ..+.+++++|...|....
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~------~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLT------DEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSS------HHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCc------HHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 36778888854 788999999999996433222221 44455567766554 479999999999997654
|
It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=90.36 E-value=1.4 Score=54.28 Aligned_cols=102 Identities=18% Similarity=0.184 Sum_probs=79.3
Q ss_pred cccCcccHHHHHHHHHccc--CCCccchhhhcccc---cCCC--CHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHH-h
Q 002711 138 KNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNE--SKDFASELFDALARRRGLTSSSITKSELRGFWEQ-I 209 (889)
Q Consensus 138 ~~~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---g~~~--~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~ 209 (889)
+..++....+++..|+..+ ..|.++.++|..|+ |.+. .+....+.|.++...|.+..|.+++.||.+.+.. .
T Consensus 739 k~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 739 KGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred cchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 3344455678888888888 56779999999998 3332 2445788888888777766689999999999866 5
Q ss_pred ccCChHHHHHHHHHHhcCCCCceeeHHHHHH
Q 002711 210 TDQSFDARLETFFDMVDKNLDGRITEEEVKE 240 (889)
Q Consensus 210 ~~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~ 240 (889)
...+.++++..+|+.+-++.. +|..+||..
T Consensus 819 e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 819 EDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 566788899999999988877 888888876
|
|
| >KOG4347 consensus GTPase-activating protein VRP [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.5 Score=55.58 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=73.4
Q ss_pred ccccccc--cCcccHHHHHHHHHccc-----CCC--c---------cchhhhcccc-cC---CCCHHHHHHHHHHHHhhC
Q 002711 133 LKFITKN--VGTEGWGEVEKRFDELA-----VDG--M---------LPKSSFGQCI-GM---NESKDFASELFDALARRR 190 (889)
Q Consensus 133 L~~i~~~--~~~~~~~~l~~~F~~ld-----~dG--~---------Ls~~ef~~~l-g~---~~~~~~~~~lf~~l~~~d 190 (889)
||-+.++ ++.+++..|..+|++-- +-| . ++.+.|...+ +. ..+..+.+++|..+|+..
T Consensus 489 lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~ 568 (671)
T KOG4347|consen 489 LRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSM 568 (671)
T ss_pred HHhhcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCC
Confidence 4555443 57888899999997532 111 1 2222232222 11 124578899999655444
Q ss_pred CCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCceeeHHHH
Q 002711 191 GLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEV 238 (889)
Q Consensus 191 ~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~aF~~~Dkd~dG~It~eEl 238 (889)
. |.|+|.+|+..+..+.....-+++..+|+++|.+++ ..+.||+
T Consensus 569 ~---g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 569 T---GLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred c---ceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 4 999999999999999988999999999999999999 9999998
|
|
| >PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.17 Score=47.32 Aligned_cols=29 Identities=28% Similarity=0.264 Sum_probs=19.2
Q ss_pred ccHHHHHHHHHccc--CCCccchhhhccccc
Q 002711 143 EGWGEVEKRFDELA--VDGMLPKSSFGQCIG 171 (889)
Q Consensus 143 ~~~~~l~~~F~~ld--~dG~Ls~~ef~~~lg 171 (889)
.....+.-.|..|| +||.|+..|+.....
T Consensus 51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~ 81 (113)
T PF10591_consen 51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRR 81 (113)
T ss_dssp GGHHHHHHHHHHH--T-SSEE-TTTTGGGGS
T ss_pred hhhhhhhhhHhhhcCCCCCccCHHHHHHHHH
Confidence 34456777888888 788888888876654
|
SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B. |
| >PF08021 FAD_binding_9: Siderophore-interacting FAD-binding domain; InterPro: IPR013113 Proteins in this entry are siderophore-interacting FAD-binding proteins | Back alignment and domain information |
|---|
Probab=89.42 E-value=2.2 Score=40.11 Aligned_cols=90 Identities=17% Similarity=0.238 Sum_probs=50.2
Q ss_pred EEEEEEEecCCEEEEEEecCC--CCc-cCCccEEEEEEcCCCCC---------------------cccceeeeec-CCCC
Q 002711 579 RILKVAVYPGNVLALQMSKPQ--GFK-YTSGQYIFVNCAAVSQF---------------------QWHPFSITSA-PGDD 633 (889)
Q Consensus 579 ~i~~v~~~~~~v~~l~~~~p~--~~~-~~pGQyv~l~~p~is~~---------------------e~HPFTIaSa-P~~~ 633 (889)
+|+.++.++.++.+|++..+. .+. ..||||+.|.+|....- ..+.|||-+. |+.+
T Consensus 1 ~V~~~~~ltP~~~Rv~l~g~~l~~~~~~~~d~~ikL~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~R~YTvR~~d~~~~ 80 (117)
T PF08021_consen 1 TVVRVERLTPHMRRVTLGGEDLAGFPSWGPDQHIKLFFPPPGGDPPLPPPLDEGGYRWPPDEQRPVMRTYTVRRFDPETG 80 (117)
T ss_dssp EEEEEEEEETTEEEEEEESGGGTT--S--TT-EEEEEE--TTS----------------------EEEEEE--EEETT--
T ss_pred CEEEEEECCCCEEEEEEECCCcccCccCCCCcEEEEEeCCCCCCccccccccccccccccccCCCCCCCcCEeeEcCCCC
Confidence 467889999999999999865 333 47999999999864321 3567888775 5667
Q ss_pred ceEEEEEecCc--chHHHHHHHhhccCCCCCCCccccccccccCCCCCCccEEEEeCCCCCC
Q 002711 634 YLSIHIRTLGD--WTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 634 ~l~l~Ir~~G~--wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~vdGPYG~~ 693 (889)
.+.|-+-..|+ -..+=...+ ++|+ .|.|-||-|++
T Consensus 81 ~l~iDfv~Hg~~Gpas~WA~~A-------------------~pGd------~v~v~gP~g~~ 117 (117)
T PF08021_consen 81 ELDIDFVLHGDEGPASRWARSA-------------------RPGD------RVGVTGPRGSF 117 (117)
T ss_dssp EEEEEEE--SS--HHHHHHHH---------------------TT-------EEEEEEEE---
T ss_pred EEEEEEEECCCCCchHHHHhhC-------------------CCCC------EEEEeCCCCCC
Confidence 77776666654 111111111 2687 89999998763
|
This entry includes the vibriobactin utilization protein ViuB, which is involved in the removal of iron from iron-vibriobactin complexes, as well as several hypothetical proteins.; PDB: 2GPJ_A. |
| >KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.23 E-value=0.37 Score=51.93 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=54.5
Q ss_pred HHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCCc
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQ 292 (889)
Q Consensus 217 ~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~~ 292 (889)
-+...|..+|+|.++.|.+.|.+.+=.......++ ..-...+++-.|.|+|-.||++|+..-|...+..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~-------rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~~~ 402 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKP-------RKCSRKFFKYCDLNKDKKISLDEWRGCLGVEKER 402 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccH-------HHHhhhcchhcccCCCceecHHHHhhhhcccccc
Confidence 46778999999999999999988766543332221 3345569999999999999999999999877654
|
|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=85.13 E-value=4.1 Score=48.88 Aligned_cols=91 Identities=9% Similarity=0.108 Sum_probs=60.2
Q ss_pred CcccHHHHHHHHHHhc--cCChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcC--
Q 002711 195 SSITKSELRGFWEQIT--DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELD-- 270 (889)
Q Consensus 195 G~Id~~EF~~~~~~~~--~~~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D-- 270 (889)
|.++|+||..+...+. ...+..++..+|+.|-.++ +.+|.+||..+|.........+ .+.+++.++.+++...
T Consensus 15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~--~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCT--LAEAQRIVEEVINRRHHV 91 (599)
T ss_pred CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCC--HHHHHHHHHHHHhhcccc
Confidence 8999999999887764 2346788999999995544 6899999999997433222111 2223333333333222
Q ss_pred -CCCCCcccHHHHHHHHHh
Q 002711 271 -PHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 271 -~d~dG~Is~~EF~~~l~~ 288 (889)
..+.+.+++++|...|..
T Consensus 92 ~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred ccccccCcCHHHHHHHHcC
Confidence 123456999999998875
|
|
| >PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions | Back alignment and domain information |
|---|
Probab=83.97 E-value=7 Score=34.96 Aligned_cols=71 Identities=8% Similarity=0.133 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhh-----cccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhC
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSAS-----ANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 215 ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~-----~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
+||++.+|+.+ .|.+|.++..-|..++..... ....+... .+..+...|+..- ..-.|+.++|...|...
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~--~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY--IEPSVRSCFQQVQ--LSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT----HHHHHHHHHHTT--T-S-B-HHHHHHHHHT-
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC--cHHHHHHHhcccC--CCCccCHHHHHHHHHhC
Confidence 58999999999 789999999999888863110 01111111 4666777888873 45679999999999887
Q ss_pred C
Q 002711 290 P 290 (889)
Q Consensus 290 p 290 (889)
|
T Consensus 77 P 77 (90)
T PF09069_consen 77 P 77 (90)
T ss_dssp -
T ss_pred C
Confidence 7
|
The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A. |
| >KOG4065 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.44 E-value=1.3 Score=40.66 Aligned_cols=64 Identities=17% Similarity=0.066 Sum_probs=40.9
Q ss_pred cCcccHHHHHHHHHccc--CCCccchhhhcccc---------cC----CCCHHHHHHHHHHH-HhhCCCCCCcccHHHHH
Q 002711 140 VGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---------GM----NESKDFASELFDAL-ARRRGLTSSSITKSELR 203 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld--~dG~Ls~~ef~~~l---------g~----~~~~~~~~~lf~~l-~~~d~~~~G~Id~~EF~ 203 (889)
++.++.. ..-|+.-| +||.|+=-|+.+++ |- ..++.+.++|.+.+ +|+|-|++|.|||.||+
T Consensus 63 mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEfl 140 (144)
T KOG4065|consen 63 MTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFL 140 (144)
T ss_pred CCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHH
Confidence 4444432 34566656 88999887877776 11 13456667777754 44445677999999998
Q ss_pred HH
Q 002711 204 GF 205 (889)
Q Consensus 204 ~~ 205 (889)
..
T Consensus 141 K~ 142 (144)
T KOG4065|consen 141 KR 142 (144)
T ss_pred hh
Confidence 64
|
|
| >KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=80.65 E-value=5.4 Score=46.96 Aligned_cols=149 Identities=11% Similarity=0.112 Sum_probs=88.8
Q ss_pred CcccHHHHHHHHHccc--CCCccchhhh----cccccCCCCHHHHHHHHHHHHhhCCC--CCCcccHHHHHHHHHHhccC
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSF----GQCIGMNESKDFASELFDALARRRGL--TSSSITKSELRGFWEQITDQ 212 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Ls~~ef----~~~lg~~~~~~~~~~lf~~l~~~d~~--~~G~Id~~EF~~~~~~~~~~ 212 (889)
...-...+.++|+.-| .||.++-.|+ +.|++..-...+.+.+-..+.+.-.+ ..+.++..-|+.....+.+.
T Consensus 190 kp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfier 269 (625)
T KOG1707|consen 190 KPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIER 269 (625)
T ss_pred cHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHh
Confidence 3344568889999888 8999998776 44677766666666666655544322 22556666677655443332
Q ss_pred ChHHHHHHHHHHhcCCCCceeeHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHhCCC
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 213 ~~ee~l~~aF~~~Dkd~dG~It~eEl~~vl~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
...|-.-.+-+.|--+.+=.++.+=+..-++. .....-++....-+....+|..+|.|+||.++=+|+..+....|.
T Consensus 270 gr~EttW~iLR~fgY~DsleL~~~~l~p~~~~--~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~ 346 (625)
T KOG1707|consen 270 GRHETTWTILRKFGYTDSLELTDEYLPPRLKV--PPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPG 346 (625)
T ss_pred ccccchhhhhhhcCCcchhhhhhhhcCccccC--CCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCC
Confidence 22333333334443343434443322222211 001111222334556777999999999999999999999999883
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 889 | ||||
| 3a8r_A | 179 | The Structure Of The N-Terminal Regulatory Domain O | 2e-65 | ||
| 3a1f_A | 186 | The Crystal Structure Of Nadph Binding Domain Of Gp | 7e-24 |
| >pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A Plant Nadph Oxidase Length = 179 | Back alignment and structure |
|
| >pdb|3A1F|A Chain A, The Crystal Structure Of Nadph Binding Domain Of Gp91(Phox) Length = 186 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 889 | |||
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 3e-88 | |
| 3a1f_A | 186 | Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi | 3e-53 | |
| 1snl_A | 103 | Nucleobindin 1, calnuc; EF-hand, calcium-binding, | 1e-10 | |
| 2qdx_A | 257 | Ferredoxin reductase; oxidoreductase; HET: FAD; 1. | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 2bgi_A | 272 | Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi | 6e-07 | |
| 1qfj_A | 232 | Protein (flavin reductase); riboflavin, ferredoxin | 2e-06 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 3e-06 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 4e-06 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 6e-06 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 6e-06 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 7e-06 | |
| 4fk8_A | 271 | Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st | 9e-06 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 1e-05 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 1e-05 | |
| 1krh_A | 338 | Benzoate 1,2-dioxygenase reductase; alpha-beta, FA | 2e-05 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 3e-05 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 3e-05 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 4e-05 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 7e-05 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 1e-04 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 2e-04 | |
| 1gvh_A | 396 | Flavohemoprotein; oxidoreductase, NADP, heme, flav | 3e-04 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 3e-04 | |
| 1cqx_A | 403 | Flavohemoprotein; globin fold, six-stranded antipa | 4e-04 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 4e-04 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 6e-04 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 6e-04 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 7e-04 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 9e-04 |
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 277 bits (709), Expect = 3e-88
Identities = 117/175 (66%), Positives = 144/175 (82%)
Query: 121 RTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMNESKDFAS 180
TKS AA ALKGL+F+T VG +GW VEKRF++L VDG+L +S FG+CIGM+ S +FA
Sbjct: 3 GTKSSAAVALKGLQFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCIGMDGSDEFAV 62
Query: 181 ELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKE 240
++FD+LAR+RG+ +TK EL+ F+EQ+TDQ FD RL TFFDMVDKN DGR+T EEVKE
Sbjct: 63 QMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKE 122
Query: 241 IIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSAN 295
IIALSASANKLSKI+ER +EY ALIMEELDP NLGYIE+ +LE LLLQ+PS++A
Sbjct: 123 IIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAA 177
|
| >3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Length = 186 | Back alignment and structure |
|---|
Score = 182 bits (462), Expect = 3e-53
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 684 LLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGAT 743
+ +DGP+G ++D Y+V++LVG GIG TP SI+K V
Sbjct: 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNA------------- 47
Query: 744 KNSKKKPFATKRAYFYWVTREQGSFEWFRGVM----NEVAEYDQDGVIELHNYCTSVYEE 799
K+ YFYW+ R+ +FEWF ++ +++ E + G + + Y T E
Sbjct: 48 -----TNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLTGWDES 102
Query: 800 GDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCG 859
H D+++G + KT + RPNW FK +A +H + R+GVF CG
Sbjct: 103 --------QANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCG 154
Query: 860 APGLTGELRRLSQDFSR--KTTTKFDFHKENF 889
L L + S S F F+KENF
Sbjct: 155 PEALAETLSKQSISNSESGPRGVHFIFNKENF 186
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 1e-10
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 201 ELRGFWEQ---ITDQSFDARLETFFDMVDKNLDGRITEEEVKEII-----ALSASANKLS 252
L+ WE+ + F+ + TFF + D N DG + E+E++ + + N+
Sbjct: 4 MLKEVWEELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEED 61
Query: 253 KIQERVEEYAAL---IMEELDPHNLGYIEL 279
++E EE + +M+ +D + + L
Sbjct: 62 DMREMEEERLRMREHVMKNVDTNQDRLVTL 91
|
| >2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Length = 257 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 5e-08
Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 52/222 (23%)
Query: 573 SGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD 632
S + R+L V + + + + ++ G ++ +GQ++ + + +SI S +
Sbjct: 1 SNLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYE 60
Query: 633 DYLSIHIRTL--GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPY 690
++L + G TS+L+ L D +L++
Sbjct: 61 EHLEFFSIKVPDGPLTSRLQH---------------LKEGD-----------ELMVSRKP 94
Query: 691 GAP--AQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK-----------------E 731
D L L+ G G P +S+I+D + +K
Sbjct: 95 TGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADF 154
Query: 732 IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRG 773
I + + E K Y+ VTRE + +
Sbjct: 155 ITKVLPEHEYF-----GDQVKEKLIYYPLVTREPFRNQGRQT 191
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 4e-07
Identities = 71/560 (12%), Positives = 145/560 (25%), Gaps = 161/560 (28%)
Query: 5 DYKDDSLSETG-STTSSRVGYSGPLSGPLVTTTNKKNSSRKSARFKDQDECYVEI----- 58
+ + S+ R+ + + + + A + + V I
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160
Query: 59 ------TLDV-RDDSVSVQ--------NIRGGDSETAFLA----------SRLERKPSSS 93
LDV V + N++ +S L + S
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 94 SALSARLRQVSQELKRMASSKRFDK----VDRTKSGAARALKGLKF-----IT---KNVG 141
S + R+ + EL+R+ SK ++ + ++ A+A +T K V
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLSCKILLTTRFKQVT 278
Query: 142 TEGWGEVEKRFD-ELAVDGMLPKSS---FGQCIGMNESKDFASELFDALARRRGLTSSSI 197
+ + P + + +D E SI
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPRE-----VLTTNPRRLSI 332
Query: 198 TKSELRGF---WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASAN----K 250
+R W+ + D +L T + L+ + + SA+
Sbjct: 333 IAESIRDGLATWDNWKHVNCD-KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Query: 251 LSKI-QERVEEYAALIMEEL--------DPHNLGYIELYNLEMLLLQAPSQSANLLTDSR 301
LS I + ++ +++ +L P I + ++ + L
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE-STISIPSIYLELKVKLENEYA------ 444
Query: 302 VLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKH 361
L + +V P L D Y
Sbjct: 445 -----LHRSIV-DHYNIPKTFDSDDLIPPYLDQ------------------------Y-- 472
Query: 362 RAVFHVMGYCVTTAKGAAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNINFHK 421
+ +G+ + + F M + L +L K
Sbjct: 473 --FYSHIGHHLKNIEHPERMTLFRM--VFL-----DFRFLEQ-----------------K 506
Query: 422 VIAVGIAIGVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRP------DDYWWFVKG 475
+ A +A + +L + Y KP+ D+ P + F+
Sbjct: 507 IRHDSTA----WNASGSILNTLQQL-----KFY---KPYICDNDPKYERLVNAILDFLPK 554
Query: 476 TEG------WTGVVMVVLMA 489
E +T ++ + LMA
Sbjct: 555 IEENLICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 2e-06
Identities = 87/602 (14%), Positives = 168/602 (27%), Gaps = 157/602 (26%)
Query: 101 RQVSQELKRMASSKRFDKVDRTKSGAARAL--------KGLKFITKNVGTE-----GWGE 147
+ V K + S + D + +K + L K + + K V +
Sbjct: 36 KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF-- 93
Query: 148 VEKRFDELAVDGMLPKSSFGQCIG--MNESKDFAS------ELFDALARRRGLTS----- 194
+ + + + N+++ FA + + L R+ L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--RQALLELRPAK 151
Query: 195 ------------SSITKSELRG-----------FW----EQITDQSFDARLETFFDMVDK 227
+ + FW + ++ L+ +D
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 228 NLDGRITEEEVKEIIALSASANKLSK-IQERVEEYAALIMEELDPHNLGYIELYNLE--M 284
N R + + + + +L + ++ + E L++ + N +NL +
Sbjct: 212 NWTSRS-DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL--NVQNAKAWNAFNLSCKI 268
Query: 285 LLLQAPSQSANLL---TDSRVLSQMLSQRLVPTKDRNPIKKCCRGLSYFVQDNWKRIW-V 340
LL Q + L T + + S L P + ++ + K L QD + +
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY---LDCRPQDLPREVLTT 325
Query: 341 MLLWLSICAGLF-----TWKFI-QYKHRAVFHVMGYCVTTAKGAAETLKFNMALILLPVC 394
LSI A TW + ++ + + AE K L + P
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-PAEYRKMFDRLSVFPPS 384
Query: 395 RN------TITWLRSRTKLGQVV-------------PFDDNINFHKVIAVGIAIGVGLHA 435
+ ++ W VV P + I+ ++
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP-----------SIYL 433
Query: 436 GAHLTCDFPRLLHAT-DEEYEPMKPFFGDDRP----DDYW-WFVKGTEGWTGVVMVVLMA 489
+ + LH + + Y K F DD D Y+
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH----------------- 476
Query: 490 ISYTLAQ-------PWFRRNRLNL----PKILKKLTGFNAFWYSHHLF--VIVYVLFIIH 536
I + L FR L+ KI T +NA + + Y +I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC- 535
Query: 537 GYFLYLSKKWYKRTTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAV-YPGNVLALQM 595
+ Y+R L L E LI K +L++A+ + +
Sbjct: 536 -----DNDPKYERLVNAILD--FLPKIEENLIC-----SKYTDLLRIALMAEDEAIFEEA 583
Query: 596 SK 597
K
Sbjct: 584 HK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 74/647 (11%), Positives = 169/647 (26%), Gaps = 211/647 (32%)
Query: 218 LETFFDMVDKNLDGR---------ITEEEVKEIIALSASANKLSKI----QERVEEYAAL 264
L F D N D + +++EE+ II + + ++ + EE
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 265 IMEELDPHNLGYI------ELYNLEMLLLQAPSQSANLLTDSRVLSQMLSQRLVPTKDRN 318
+EE+ N ++ E M+ Q L D++V ++ RL P
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK-- 139
Query: 319 PIKKCCRGLSYFVQDNWKRIWVMLLWLSICAGLFTWKFIQYKHRAVFHVMGYCVTTAKG- 377
+++ L V++ + G
Sbjct: 140 -LRQALLELR-------PAKNVLI-----------------------DGVLGS-----GK 163
Query: 378 ---AAETLKFNMALILLPVCRNTITWLRSRTKLGQVVPFDDNIN-----FHKVIAVGIAI 429
A + + I WL L + + ++ I
Sbjct: 164 TWVALDVCLSYKVQCKMD---FKIFWL----NLKNCNSPETVLEMLQKLLYQ-------I 209
Query: 430 GVGLHAGAHLTCDFPRLLHATDEEYEPMKPFFGDDRP--------DDYW--WFVKG---- 475
+ + + + +H+ E ++ +P +
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAE---LRRLL-KSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 476 ----------------TEGWTGVVMVVLMAISYT-------LAQPWFRRNRLNLPKILKK 512
+ T + + +++ T L + + +LP+ +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPREVLT 324
Query: 513 LTGFNAFWYSHHLFVI-VYVLFIIHG-----YFLYLSKKWYKRTTWMYLAV--PVLLYAC 564
+ + + I G + +++ L V P
Sbjct: 325 ----------TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 565 ERLIRAFRSGYKSVRILKVAVYPGNVLAL---------------QMSK-------PQGFK 602
+ F S I P +L+L ++ K P+
Sbjct: 375 FDRLSVFP---PSAHI------PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 603 YT-SGQYIFVNCAAVSQFQWH--------------PFSITSAPGDDY----LSIHIRTL- 642
+ Y+ + +++ H + D Y + H++ +
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 643 -GDWTSQLKSIF-------AKVCQP-PSVDQSGLLRADIGQADN-RPRIPKLLIDGPYGA 692
+ + + +F K+ + + SG + + Q +P I D Y
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD--NDPKYER 543
Query: 693 PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITED 739
D+ L + + + +++ L E +E I E+
Sbjct: 544 LVNAILDF--LPKIEENLICSKYTDLLRIALMA-----E-DEAIFEE 582
|
| >2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Length = 272 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 41/210 (19%)
Query: 579 RILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVS-QFQWHPFSITSAPGDDYLSI 637
+ V + + + ++++PQ ++ SG+++ + + + +SI S D+ L
Sbjct: 20 TVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEF 79
Query: 638 HIRTL--GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA-PA 694
+ + G TS+L+ I + +Q +L P G
Sbjct: 80 YSIKVPDGPLTSRLQHI-----KVG--EQI------------------ILRPKPVGTLVI 114
Query: 695 QDYKDYDVLLLVGLGIGATPLISIIKDVLNN-----------IKQQKEIEEGITEDGGAT 743
L + G G P S++++ + E+E G
Sbjct: 115 DALLPGKRLWFLATGTGIAPFASLMREPEAYEKFDEVIMMHACRTVAELEYGRQLVEALQ 174
Query: 744 KNSKKKPFATKRAYFY-WVTREQGSFEWFR 772
++ + +Y TRE+
Sbjct: 175 EDPLIGELVEGKLKYYPTTTREEFHHMGRI 204
|
| >1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 33/139 (23%)
Query: 589 NVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDD-YLSIHIRTL--GDW 645
V +++ F + +GQY+ V + + PFS+ S P + ++ +HI +
Sbjct: 16 TVYRVRIVPDAAFSFRAGQYLMV---VMDERDKRPFSMASTPDEKGFIELHIGASEINLY 72
Query: 646 TSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG-APAQDYKDYDVLL 704
+ R ++++D P+G A +D ++ ++L
Sbjct: 73 AKAVMD-----------------RILKDH--------QIVVDIPHGEAWLRDDEERPMIL 107
Query: 705 LVGLGIGATPLISIIKDVL 723
+ G G G + SI+ L
Sbjct: 108 IAG-GTGFSYARSILLTAL 125
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 3e-06
Identities = 21/136 (15%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSF----GQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F G++ + +F Q ++ +A LF+A + + S+ +
Sbjct: 58 RGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ---TGSVKFEDFVTA 114
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L F++ D N DG I +EE+ +I+ + ++ ++
Sbjct: 115 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH 174
Query: 262 AALIMEELDPHNLGYI 277
+ +++D + G +
Sbjct: 175 VDVFFQKMDKNKDGIV 190
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 4e-06
Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 34/194 (17%)
Query: 91 SSSSALSARLRQVSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEK 150
S +A ++ + +AS F + ++ L +
Sbjct: 6 SKKKKKNAMRPPGYEDPELLASVTPFTVEE---------VEALY---------------E 41
Query: 151 RFDELA----VDGMLPKSSFGQCIGMNESKD--FASELFDALARRRGLTSSSITKSE-LR 203
F +L+ DG++ K F + N ++ FA +FD +R + I E +R
Sbjct: 42 LFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKR---NGVIEFGEFVR 98
Query: 204 GFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAA 263
+++ F + D G I EE+KE++ ++L ++ +E
Sbjct: 99 SLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVD 158
Query: 264 LIMEELDPHNLGYI 277
+ D N G I
Sbjct: 159 KAFVQADRKNDGKI 172
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 6e-06
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGF 205
K F G L F + G ++ FA +F +I E
Sbjct: 32 KGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANG---DGTIDFREFIIA 88
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L+ F M D + +G I++ E+ EI+ + +S K+ + + E+
Sbjct: 89 LSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKR 148
Query: 262 AALIMEELDPHNLGYI 277
I ++D + G +
Sbjct: 149 TEKIFRQMDTNRDGKL 164
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 6e-06
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSFGQCI----GMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
K F G L + F + +DFA+ LF + + I E
Sbjct: 32 KGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDN---NGFIHFEEFITV 88
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + + +L F++ D N DG IT +E+ I+ + S L++ + E
Sbjct: 89 LSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMR 148
Query: 262 AALIMEELDPHNLGYI 277
I + +D + GYI
Sbjct: 149 VKKIFKLMDKNEDGYI 164
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSFGQCI----GMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
K F + G L + F + + FA+ +F+ + I SE
Sbjct: 32 KGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENK---DGRIEFSEFIQA 88
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + D +L F + D + DG IT E+ +I+ + + +L + + E+
Sbjct: 89 LSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKR 148
Query: 262 AALIMEELDPHNLGYI 277
I +D + G +
Sbjct: 149 VDRIFAMMDKNADGKL 164
|
| >4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Length = 271 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 52/219 (23%)
Query: 573 SGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD 632
S + + +L V + + + ++ Q ++ +G++ V + +SI S +
Sbjct: 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYE 76
Query: 633 DYLSIHIRTL--GDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPY 690
++L + G TS+L+ + + D +LI
Sbjct: 77 EHLEFFSIKVQNGPLTSRLQHL-----KVG--DP-------------------VLIGKKP 110
Query: 691 GA--PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQK-----------------E 731
A + L ++ G G P +SII+D + K
Sbjct: 111 TGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERFDKVVLTHTCRLKGELAYMDY 170
Query: 732 IEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEW 770
I+ + K Y+ VTRE+ E
Sbjct: 171 IKHDLPGHEYL-----GDVIREKLVYYPTVTREEFENEG 204
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 13/138 (9%)
Query: 150 KRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F + G + + F + K +A +F + ++ E
Sbjct: 40 QSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL---DGTLDFKEYVIA 96
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEI------IALSASANKLSKIQERVE 259
T + +LE F + D + +G I++ EV EI + L + E
Sbjct: 97 LHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPE 156
Query: 260 EYAALIMEELDPHNLGYI 277
+ A I + ++ +
Sbjct: 157 KRAEKIWKYFGKNDDDKL 174
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSFGQCI----GMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
K F + G L KS F + + FA +F+ + + I E
Sbjct: 32 KGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADK---NGYIDFKEFICA 88
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L F + D + +G I+ +E+ I+ + S KL + ++ E+
Sbjct: 89 LSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKR 148
Query: 262 AALIMEELDPHNLGYI 277
I +D + G +
Sbjct: 149 VNKIFNMMDKNKDGQL 164
|
| >1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 38/179 (21%)
Query: 550 TTWMYLAVPVLLYACERLIRAFRSGYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSG 606
T+ + C+ I F + +V + + + G + +G
Sbjct: 88 TSDAVFQIQASSEVCKTKIHHFE-----GTLARVENLSDSTITFDIQLDDGQPDIHFLAG 142
Query: 607 QYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSIFAKVCQPPSVDQ 664
QY+ V ++ +S +S PG+ +R + G + L
Sbjct: 143 QYVNVTLPGTTE--TRSYSFSSQPGNRLTGFVVRNVPQGKMSEYLSV------------- 187
Query: 665 SGLLRADIGQADNRPRIPKLLIDGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVL 723
+A G K+ GP+G+ VL+L G G G P +S+++ +
Sbjct: 188 ----QAKAGD--------KMSFTGPFGSFYLRDVKRPVLMLAG-GTGIAPFLSMLQVLE 233
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 30/211 (14%), Positives = 61/211 (28%), Gaps = 36/211 (17%)
Query: 104 SQELKRMASSKRFDKVDRTKSGA------ARALKGLKFITKNVGTEGWGEVEKRFDELAV 157
+ + + + D SG ++ L K G E E++ D+
Sbjct: 15 ASQFFEI-----WLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 158 DG------------MLPKSSFGQCIGMNESKDFASELFDALAR--RRGLTSSSITKSELR 203
+ + +F + E + S I EL+
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQ-LKSCEEFMKTWRKYDTDH--SGFIETEELK 126
Query: 204 GFW--------EQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQ 255
F + + D + + D N DG++ E+ ++ + + +
Sbjct: 127 NFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGI 186
Query: 256 ERVEEYAALIMEELDPHNLGYIELYNLEMLL 286
+ + E D GYI+ L+ LL
Sbjct: 187 KMCGKEFNKAFELYDQDGNGYIDENELDALL 217
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 31/161 (19%)
Query: 105 QELKRMASSKRFDKVDRTKSG---------AARALKGLKFITKNVGTEGWGEVEKRFDEL 155
+++K +VD T G A + + ++ E E + D+L
Sbjct: 14 RKMKTR-----MQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQL 68
Query: 156 AVDG------------MLPKSSFGQCIGMNESKDFASELFDALAR-RRGLTSSSITKSEL 202
+ + + + ++D + + G ++ E
Sbjct: 69 GLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDG----YVSLPEF 124
Query: 203 RGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243
+ F + + D + T F+ +D N +G+I+ +E +
Sbjct: 125 KAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-05
Identities = 21/136 (15%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSF----GQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F G++ + +F Q ++ +A LF+A + + S+ +
Sbjct: 25 RGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ---TGSVKFEDFVTA 81
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEI----IALSASANKLSKIQERVEEY 261
+ + +L F++ D N DG I +EE+ +I + ++ ++
Sbjct: 82 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH 141
Query: 262 AALIMEELDPHNLGYI 277
+ +++D + G +
Sbjct: 142 VDVFFQKMDKNKDGIV 157
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 7e-05
Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSF----GQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F G++ + +F Q ++ +A LF+A + +I +
Sbjct: 98 RGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADG---NGAIHFEDFVVG 154
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L+ F++ D N DG IT+EE+ I+ + ++ E+
Sbjct: 155 LSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEH 214
Query: 262 AALIMEELDPHNLGYI 277
+++D + G +
Sbjct: 215 VERFFQKMDRNQDGVV 230
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 150 KRFDELAVDGMLPKSSF----GQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F G++ + +F Q +S +A LF+A + +++ +
Sbjct: 71 RGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDH---NGAVSFEDFIKG 127
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L F++ D N DG IT+EE+ +I+ + ++ ++
Sbjct: 128 LSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQH 187
Query: 262 AALIMEELDPHNLGYI 277
+++D + G +
Sbjct: 188 VETFFQKMDKNKDGVV 203
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 150 KRFDELA----VDGMLPKSSFGQCIGMNESKD--FASELFDALARRRGLTSSSITKSE-L 202
+ F +++ DG++ K F + K+ FA +FD + + + E
Sbjct: 52 ELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH---NGILGFEEFA 108
Query: 203 RGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYA 262
R + D ++ F + D G I +EVK+++ + + + ++ +E+
Sbjct: 109 RALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDII 168
Query: 263 ALIMEELDPHNLGYI 277
EE D + G I
Sbjct: 169 DKTFEEADTKHDGKI 183
|
| >1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 30/159 (18%)
Query: 573 SGYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYI--FVNCAAVSQFQWHPFSIT 627
G + RI+ + + ++ G +Y GQY+ ++ + +S+T
Sbjct: 150 EGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLT 209
Query: 628 SAPGDDYLSIHI-RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLI 686
P I + R G S L D + +
Sbjct: 210 RKPDGKGYRIAVKREEGGQVSN------------------WLHNHANVGD------VVKL 245
Query: 687 DGPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNN 725
P G D + L+ G+G TP+++++ +
Sbjct: 246 VAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKA 284
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 8/132 (6%)
Query: 150 KRFDELAVDGMLPKSSFGQCIGM----NESKDFASELFDALARRRGLTSSSITKSELRGF 205
K+F G L F Q G+ + + ++F+ + I E
Sbjct: 21 KKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK---DGYIDFMEYVAA 77
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALI 265
+ D +L +F + D + +G I E+ II + N+ ++ EE+ ++
Sbjct: 78 LSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE-AMTAEEFTNMV 136
Query: 266 MEELDPHNLGYI 277
+++D + G +
Sbjct: 137 FDKIDINGDGEL 148
|
| >1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 23/158 (14%)
Query: 573 SGYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYI--FVNCAAVSQFQWHPFSIT 627
G+++ I + + + + G + GQY ++ A+ Q +S++
Sbjct: 152 KGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLS 211
Query: 628 SAPGDDYLSIHIRTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLID 687
P I ++ G P S LL + D ++ +
Sbjct: 212 DMPNGRTYRISVKREGGGPQ------------PPGYVSNLLHDHVNVGD------QVKLA 253
Query: 688 GPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNN 725
PYG+ D ++L+ G+G TP++S++K L
Sbjct: 254 APYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQA 291
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 152 FDELAVDGMLPKSSFGQCIGMNESK-DFASELFDALARRRGLTSSSITKSELRGF----- 205
+EL + +LP+ I E+ D + E + +S I+ +EL+ F
Sbjct: 76 IEEL-ANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLF 134
Query: 206 ---WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYA 262
++I D + + DKN DGR+ ++ I+AL + K+ +
Sbjct: 135 LQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVER 194
Query: 263 ALIMEEL----DPHNLGYIELYNLEMLL 286
E++ D G +E ++ +
Sbjct: 195 KRDFEKIFAHYDVSRTGALEGPEVDGFV 222
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 21/183 (11%), Positives = 54/183 (29%), Gaps = 48/183 (26%)
Query: 96 LSARLRQVSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDEL 155
L A++ Q QE K + + D+ A + + + ++R L
Sbjct: 42 LEAQIAQKEQEQK-----AKLAEYDQKVQNEFDARERAERE-REAARGDAAAEKQRLASL 95
Query: 156 AVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215
D S G N + L ++ + +
Sbjct: 96 LKDLEDDAS------GYNRLRPSKPML---------------SEEDTNILRQL------- 127
Query: 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLG 275
F + G+ + +++K+ L+ A+ + + +++ + ++ G
Sbjct: 128 ------FLSSAVSGSGKFSFQDLKQ--VLAKYADTIPE--GPLKK----LFVMVENDTKG 173
Query: 276 YIE 278
+
Sbjct: 174 RMS 176
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 207 EQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIM 266
++T L F +DKN DG++ ++E+ E + + + VEE I+
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL 405
Query: 267 EELDPHNLGYIE 278
+E+D GYIE
Sbjct: 406 KEVDFDKNGYIE 417
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 36/167 (21%)
Query: 114 KRFDKVDRTKSG--------AARALKGLKF---ITKNVGTEGWGEVEKRFDE----LAV- 157
RF +DR K G AL I ++ +G V+ F LA
Sbjct: 33 HRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVD--FPGFVRVLAHF 90
Query: 158 ----DGMLPKSSFGQCIGMNESKD---FASELFDALARRRGLTSSSITKSELRG-----F 205
D + +N ++ +A +L+D R G I++ E+
Sbjct: 91 RPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDL--DRDGK----ISRHEMLQVLRLMV 144
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLS 252
Q+T++ + + D++ DG ++ E + + K+S
Sbjct: 145 GVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMS 191
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 9e-04
Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 31/164 (18%)
Query: 114 KRFDKVDRTKSG--------AARALKGLKF---ITKNVGTEGWGEVE--------KRFDE 154
RF +D+ ++G L I +EG +V F
Sbjct: 33 SRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRP 92
Query: 155 LAVDGMLPKSSFGQCIGMNESK-DFASELFDALARRRGLTSSSITKSELRG-----FWEQ 208
+ + + + + +K FA L+D + I++ EL
Sbjct: 93 IEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDL--DKDDK----ISRDELLQVLRMMVGVN 146
Query: 209 ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLS 252
I+D+ + + D++ D I+ E +++ K+S
Sbjct: 147 ISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMS 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 889 | ||||
| d1a8pa1 | 99 | b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxi | 7e-12 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 2e-08 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 3e-06 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 2e-05 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 2e-05 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 3e-05 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-04 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-04 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 2e-04 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-04 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 7e-04 | |
| d1ep3b2 | 160 | c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase | 0.001 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 0.002 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 0.002 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 0.002 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 0.003 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 0.003 | |
| d1fdra1 | 99 | b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxi | 0.004 |
| >d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Length = 99 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Azotobacter vinelandii [TaxId: 354]
Score = 60.4 bits (146), Expect = 7e-12
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 573 SGYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD 632
S R+L V + + + + ++ ++ +GQ++ + + +SI S +
Sbjct: 1 SNLNVERVLSVHHWNDTLFSFKTTRNPSLRFENGQFVMIGLEVDGRPLMRAYSIASPNYE 60
Query: 633 DYLSIHIRTL--GDWTSQLKSI 652
++L + G TS+L+ +
Sbjct: 61 EHLEFFSIKVQNGPLTSRLQHL 82
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 2e-08
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 202 LRGFWEQI---TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA-----LSASANKLSK 253
L+ WE++ F+ + TFF + D N DG + E+E++ + + N+
Sbjct: 1 LKEVWEELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDD 58
Query: 254 IQERVEEYAAL---IMEELDPHNLGYIEL 279
++E EE + +M+ +D + + L
Sbjct: 59 MREMEEERLRMREHVMKNVDTNQDRLVTL 87
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.4 bits (109), Expect = 3e-06
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 147 EVEKRFDELAVDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSS-SITKSELRGF 205
E K F G L F + G AS+ + + R +I E
Sbjct: 25 EWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIA 84
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII----ALSASANKLSKIQERVEEY 261
+ + +L+ F M D + +G I++ E+ EI+ + +S K+ + + E+
Sbjct: 85 LSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKR 144
Query: 262 AALIMEELDPHNLGYIEL 279
I ++D + G + L
Sbjct: 145 TEKIFRQMDTNRDGKLSL 162
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 8/141 (5%)
Query: 105 QELKRMASSKRFDKVDRTKSG---AARALKGLKFITKNVGTEGWGEVEKRFDELAVDGML 161
QE++ FD D +G ++ + E ++ D+ M
Sbjct: 6 QEIREA-----FDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 162 PKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETF 221
KD E+ A + I+ L+ +++ + D L+
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 222 FDMVDKNLDGRITEEEVKEII 242
D D++ DG ++E+E I+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 10/152 (6%)
Query: 147 EVEKRFDELAV----DGMLPKSSFGQCIGMNESKD--FASELFDALARRRGLTSSSITKS 200
+ + F +++ DG++ K F + K+ FA +FD + + +
Sbjct: 18 ALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKH---NGILGFE 74
Query: 201 EL-RGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVE 259
E R + D ++ F + D G I +EVK+++ + + + ++ +E
Sbjct: 75 EFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 134
Query: 260 EYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291
+ EE D + G I+ L+L+ PS
Sbjct: 135 DIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.3 bits (101), Expect = 3e-05
Identities = 24/165 (14%), Positives = 61/165 (36%), Gaps = 11/165 (6%)
Query: 147 EVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSEL 202
+ + F G++ + +F Q ++ +A LF+A + + S+ +
Sbjct: 17 VLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ---TGSVKFEDF 73
Query: 203 RGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKE----IIALSASANKLSKIQERV 258
+ + +L F++ D N DG I +EE+ + I + ++
Sbjct: 74 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP 133
Query: 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAPSQSANLLTDSRVL 303
++ + +++D + G + L + + +L V+
Sbjct: 134 RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM 178
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (97), Expect = 1e-04
Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 13/155 (8%)
Query: 147 EVEKRFDELAVDGMLP-------KSSFGQCIGMNESKD--FASELFDALARRRGLTSSSI 197
+RF EL + F Q + + E K F + + S+
Sbjct: 18 LAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPA--KDSL 75
Query: 198 TKSEL-RGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII-ALSASANKLSKIQ 255
+ + + D + F + D + DG + E++ ++ L+
Sbjct: 76 SFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSA 135
Query: 256 ERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290
+++ I+EE D G I L + ++ ++P
Sbjct: 136 SEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 170
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 39.9 bits (93), Expect = 1e-04
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 147 EVEKRFDELAVDGMLPKSSFGQCIGM-NESKDFASELFDALARRRGLTSSSITKSELRGF 205
+++K D + +G F +G+ S + ++F A+ S I + EL+
Sbjct: 10 DIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADA---SGFIEEEELKFV 66
Query: 206 WEQITDQSF---DARLETFFDMVDKNLDGRITEEEVKEIIA 243
+ DA + F DK+ DG+I +E + ++
Sbjct: 67 LKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 107
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 39.6 bits (92), Expect = 2e-04
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 147 EVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGF 205
+++K F Q +G+ +S D ++F L + + S I + EL
Sbjct: 10 DIKKAIGAFTAADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDK---SGFIEEDELGSI 66
Query: 206 WEQITDQSF---DARLETFFDMVDKNLDGRITEEEVKEIIA 243
+ + + +T DK+ DG+I EE ++A
Sbjct: 67 LKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.0 bits (95), Expect = 2e-04
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 13/140 (9%)
Query: 150 KRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGF 205
+ F + G + + F + K +A +F + ++ E
Sbjct: 32 QSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANS---DGTLDFKEYVIA 88
Query: 206 WEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL------SASANKLSKIQERVE 259
+ + +LE F + D + +G I++ EV EI+ L + + E
Sbjct: 89 LHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPE 148
Query: 260 EYAALIMEELDPHNLGYIEL 279
+ A I + +
Sbjct: 149 KRAEKIWGFFGKKDDDKLTE 168
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.5 bits (91), Expect = 7e-04
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 150 KRFDELAVDGMLPKSSFGQC---IGMNESKDFASELFDALARRRGLTSSSITKSELRGFW 206
K+F E G L F + E+ + +F A ++I E
Sbjct: 28 KKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNG---DNTIDFLEYVAAL 84
Query: 207 EQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII---------ALSASANKLSKIQER 257
+ + + +L+ F + DK+ +G I +E+ +I+ +
Sbjct: 85 NLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLT 144
Query: 258 VEEYAALIMEELDPHNLGYI 277
EE I +D + G +
Sbjct: 145 PEEVVDRIFLLVDENGDGQL 164
|
| >d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Dihydroorotate dehydrogenase B, PyrK subunit domain: Dihydroorotate dehydrogenase B, PyrK subunit species: Lactococcus lactis, isozyme B [TaxId: 1358]
Score = 38.2 bits (88), Expect = 0.001
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 7/110 (6%)
Query: 693 PAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFA 752
P + D +L++G GIG PL + K + Q + +E+ +N F+
Sbjct: 1 PVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASENVKILENE----FS 56
Query: 753 TKRAYFYWVTREQGSFEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDA 802
+ + + GS+ V + E D + Y A
Sbjct: 57 NLKNVTLKIATDDGSYGTKGHVGMLMNEIDFEVD---ALYTCGAPAMLKA 103
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 38.0 bits (87), Expect = 0.002
Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 20/169 (11%)
Query: 83 ASRLERKPSSSSALSARLRQVSQELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGT 142
AS +++ + + LS + E K FD D G + +
Sbjct: 1 ASMTDQQAEARAFLSEE--MI-AEFKAA-----FDMFDADGGGDISTKELGTVMRMLGQN 52
Query: 143 EGWGEVEKRFDELAVDG---------MLPKSSFGQCIGMNESKDFASELFDALARRRGLT 193
E++ +E+ DG ++ + +S++ + F +
Sbjct: 53 PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNA--- 109
Query: 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242
I EL + + +E DKN DGRI +E +++
Sbjct: 110 DGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 35.7 bits (82), Expect = 0.002
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242
I EL + + +E DKN DGRI +E +++
Sbjct: 23 DGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 37.2 bits (85), Expect = 0.002
Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%)
Query: 105 QELKRMASSKRFDKVDRTKSGAARALKGLKFITKNVGTEGWGEVEKRFDELAVDGMLPKS 164
E K F D+ G + + E++ +E+ DG
Sbjct: 9 AEFKEA-----FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 165 SFGQCIGMNESKDFASELFDALARRRGLT---SSSITKSELRGFWEQITDQSFDARLETF 221
M + + + + I+ +ELR + ++ D ++
Sbjct: 64 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 123
Query: 222 FDMVDKNLDGRITEEEVKEII 242
D + DG I EE ++
Sbjct: 124 IREADIDGDGHINYEEFVRMM 144
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 34.9 bits (80), Expect = 0.003
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEV 238
A +F+ + + ++ E R + + FF+ +D + +G + +E
Sbjct: 3 AKRVFEKFDKNK---DGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 239 KEII 242
I
Sbjct: 60 TSCI 63
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 35.7 bits (82), Expect = 0.003
Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 147 EVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGF 205
++ E F Q G++ S ++F + + S + EL+ F
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQ---SGYLDGDELKYF 66
Query: 206 WEQITDQSF---DARLETFFDMVDKNLDGRITEEEVKEII 242
++ + ++ ++ D D + DG+I +E +E++
Sbjct: 67 LQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
|
| >d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 35.5 bits (81), Expect = 0.004
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 579 RILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIH 638
++ KV + + +L + P +T+GQ+ + + +S ++P + L +
Sbjct: 7 KVTKVQNWTDALFSLTVHAP-VLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFY 65
Query: 639 IRT-----LGDWTSQLK 650
+ T L + LK
Sbjct: 66 LVTVPDGKLSPRLAALK 82
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 889 | |||
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.85 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.83 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.82 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.82 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.82 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.82 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.8 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.78 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.78 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.76 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.75 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.73 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.72 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.72 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.71 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.71 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.69 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.68 | |
| d1tvca2 | 141 | Methane monooxygenase component C, MmoC {Methyloco | 99.65 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.63 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.63 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.63 | |
| d1cqxa3 | 142 | Flavohemoglobin, C-terminal domain {Alcaligenes eu | 99.63 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.62 | |
| d1umka2 | 147 | cytochrome b5 reductase {Human (Homo sapiens) [Tax | 99.61 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.61 | |
| d1krha2 | 133 | Benzoate dioxygenase reductase {Acinetobacter sp. | 99.59 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.58 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.58 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.57 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.57 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.57 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.56 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.54 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.54 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.54 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.53 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.53 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.53 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.53 | |
| d1gvha3 | 143 | Flavohemoglobin, C-terminal domain {Escherichia co | 99.53 | |
| d1fdra2 | 148 | Ferredoxin reductase (flavodoxin reductase) {Esche | 99.52 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.52 | |
| d2bmwa2 | 162 | Ferredoxin reductase (flavodoxin reductase) {Cyano | 99.47 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.46 | |
| d1qfja2 | 135 | NAD(P)H:flavin oxidoreductase {Escherichia coli [T | 99.45 | |
| d2cnda2 | 146 | Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} | 99.45 | |
| d1qfja1 | 97 | NAD(P)H:flavin oxidoreductase {Escherichia coli [T | 99.43 | |
| d1a8pa1 | 99 | Ferredoxin reductase (flavodoxin reductase) N-term | 99.41 | |
| d1fnda2 | 160 | Ferredoxin reductase (flavodoxin reductase) {Spina | 99.39 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.38 | |
| d2piaa2 | 120 | Phthalate dioxygenase reductase {Pseudomonas cepac | 99.37 | |
| d1f20a2 | 165 | Neuronal nitric-oxide synthase FAD/NADP+ domain {R | 99.37 | |
| d1a8pa2 | 158 | Ferredoxin reductase (flavodoxin reductase) {Azoto | 99.36 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.33 | |
| d1ep3b2 | 160 | Dihydroorotate dehydrogenase B, PyrK subunit {Lact | 99.32 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.31 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.31 | |
| d1jb9a2 | 154 | Ferredoxin reductase (flavodoxin reductase) {Maize | 99.3 | |
| d1fdra1 | 99 | Ferredoxin reductase (flavodoxin reductase) N-term | 99.29 | |
| d1tvca1 | 109 | Methane monooxygenase component C, MmoC {Methyloco | 99.25 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.23 | |
| d1krha1 | 100 | Benzoate dioxygenase reductase {Acinetobacter sp. | 99.22 | |
| d1ja1a3 | 160 | NADPH-cytochrome p450 reductase {Rat (Rattus norve | 99.22 | |
| d1cqxa2 | 111 | Flavohemoglobin, central domain {Alcaligenes eutro | 99.21 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.2 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.2 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.19 | |
| d1ddga2 | 153 | Sulfite reductase flavoprotein {Escherichia coli [ | 99.18 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.17 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.15 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.14 | |
| d1gvha2 | 107 | Flavohemoglobin, central domain {Escherichia coli | 99.09 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.08 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.07 | |
| d1ep3b1 | 101 | Dihydroorotate dehydrogenase B, PyrK subunit {Lact | 99.05 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.05 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.04 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.03 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.02 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.01 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.0 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 98.98 | |
| d2piaa1 | 103 | Phthalate dioxygenase reductase {Pseudomonas cepac | 98.98 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 98.97 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.96 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.94 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 98.94 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.94 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 98.93 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 98.92 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.89 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.87 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 98.86 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 98.86 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 98.84 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.84 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.83 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.82 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 98.82 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 98.82 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 98.81 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.81 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 98.79 | |
| d2cnda1 | 114 | Nitrate reductase core domain {Corn (Zea mays) [Ta | 98.79 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.76 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 98.76 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.75 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.75 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.75 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.71 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 98.7 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 98.7 | |
| d1fnda1 | 136 | Ferredoxin reductase (flavodoxin reductase) N-term | 98.68 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.68 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.68 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.68 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.68 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.67 | |
| d1umka1 | 124 | cytochrome b5 reductase {Human (Homo sapiens) [Tax | 98.66 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.65 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.65 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.64 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.64 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.62 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.62 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.57 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.56 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.55 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.55 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.54 | |
| d2bmwa1 | 133 | Ferredoxin reductase (flavodoxin reductase) N-term | 98.51 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.46 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.45 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.45 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.44 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.44 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.43 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.41 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.38 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.35 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 98.31 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.3 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 98.29 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.25 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.22 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 98.21 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.17 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 98.17 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.16 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.12 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 98.11 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.05 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.05 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.04 | |
| d1jb9a1 | 157 | Ferredoxin reductase (flavodoxin reductase) N-term | 97.99 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 97.95 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 97.95 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 97.93 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 97.91 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 97.9 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 97.88 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 97.86 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 97.84 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 97.81 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 97.78 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 97.76 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 97.72 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 97.66 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 97.66 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 97.66 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.66 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 97.6 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 97.54 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.52 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 97.49 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.45 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 97.4 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 97.39 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 97.39 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 97.3 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.15 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.06 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.02 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 96.7 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 96.57 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 96.13 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 95.88 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 95.47 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 93.53 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 92.92 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 90.99 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 87.3 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 82.98 |
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=9.2e-21 Score=151.07 Aligned_cols=151 Identities=19% Similarity=0.291 Sum_probs=124.7
Q ss_pred CCCCCCHHHHHHHHHCCC----CCCCCCHHHHCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC-C
Q ss_conf 369100999999998062----89851331004621688--9999999999999953999988331999999999940-6
Q 002711 139 NVGTEGWGEVEKRFDELA----VDGMLPKSSFGQCIGMN--ESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-D 211 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld----~dG~Is~~ef~~~lg~~--~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-~ 211 (889)
..+.+++..+.+.|+.+| ++|.|+.+||..++... .....++++|..++ .++ +|.|+++||+.++..+. .
T Consensus 10 ~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d-~~~--dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 10 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD-TKH--NGILGFEEFARALSVFHPN 86 (183)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHC-SSC--SSSBCHHHHHHHHHHTSTT
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHC-CCC--CCCCCHHHHHHHHHHHHCC
T ss_conf 9999999999999998885878999685999999998558999899999999970-599--9857289998788765215
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 89699999999885689993462999999999642016201368879999999988619999975139999999981998
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
...+++++.+|++||+|++|.|+.+|++.++.......+....++++++.++.+|+++|.|+||.|+++||..++.+.|.
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 166 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCHH
T ss_conf 75889888762023547899756999999999987543102106789999999999939999794809999999997989
Q ss_pred C
Q ss_conf 6
Q 002711 292 Q 292 (889)
Q Consensus 292 ~ 292 (889)
.
T Consensus 167 ~ 167 (183)
T d2zfda1 167 L 167 (183)
T ss_dssp G
T ss_pred H
T ss_conf 9
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.8e-20 Score=147.88 Aligned_cols=149 Identities=19% Similarity=0.233 Sum_probs=123.0
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHCCCC----CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 6910099999999806289851331004621----688999999999999995399998833199999999994068969
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCI----GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~l----g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
.+.+++..+.+.|...+.+|.++.++|..++ +.......++.+|+.++ .++ +|.|+++||+.++..+.....+
T Consensus 19 fs~~Ei~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d-~~~--dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 19 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFD-ENK--DGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHC-TTC--SSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC-CCC--CCCCCHHHHHHHHHHHCCCCHH
T ss_conf 9999999999999977899882799999999996699988999999999947-689--9978599999999986547603
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 99999998856899934629999999996420----16201368879999999988619999975139999999981998
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSAS----ANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~----~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
++++.+|++||.|+||+|+.+|+..++..... ...++..+...++.++.+|+++|.|+||.|+++||..++.+.|.
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 175 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS 175 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCHH
T ss_conf 36999999980699976969999999999753200234676002108999999999948999995909999999987979
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=1.9e-20 Score=148.96 Aligned_cols=150 Identities=22% Similarity=0.262 Sum_probs=122.1
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 69100999999998062898513310046216----88999999999999995399998833199999999994068969
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg----~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
-+..++..+.+.|...+.+|.++.+||..++. .....++++++|+.+ +.++ +|.|+++||+.++..++....+
T Consensus 22 fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~-D~~~--~G~I~~~Ef~~~~~~~~~~~~~ 98 (190)
T d1fpwa_ 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVF-DKDN--NGFIHFEEFITVLSTTSRGTLE 98 (190)
T ss_dssp STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTC-CSSC--SSEECHHHHHHHHHHHSCCCST
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCC--CCCCCHHHHHHHHHHHCCCCHH
T ss_conf 999999999999998789998248999999999779998699999999996-7689--9946099999999997227668
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 999999988568999346299999999964201----6201368879999999988619999975139999999981998
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASA----NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~----~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
++++.+|++||.|+||+|+.+|+..++...... ...+..+.+.++.++.+|+++|.|+||.|+++||.+++.+.|.
T Consensus 99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 178 (190)
T d1fpwa_ 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPS 178 (190)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTT
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHH
T ss_conf 89999898734399983769999999999888615656778024209999999999968999896949999999988979
Q ss_pred C
Q ss_conf 6
Q 002711 292 Q 292 (889)
Q Consensus 292 ~ 292 (889)
.
T Consensus 179 i 179 (190)
T d1fpwa_ 179 I 179 (190)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=1.8e-19 Score=142.67 Aligned_cols=149 Identities=20% Similarity=0.240 Sum_probs=122.7
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCC----CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 691009999999980628985133100462168----8999999999999995399998833199999999994068969
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGM----NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg~----~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
.+.+++..+.+.|...+++|.|+++||..+++. ......++++|..++ .++ +|.|+++||+.++........+
T Consensus 18 fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d-~~~--~g~i~~~eFl~~~~~~~~~~~~ 94 (181)
T d1bjfa_ 18 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFD-ANG--DGTIDFREFIIALSVTSRGKLE 94 (181)
T ss_dssp CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHC-SSC--SSEEEHHHHHHHHHHHTSSCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC-CCC--CCCEEHHHHHHHHHHHHHHCHH
T ss_conf 9999999999999866899985799999999985799988999999987307-799--9967299999999998020218
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 999999988568999346299999999964201----6201368879999999988619999975139999999981998
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASA----NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~----~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
++++.+|++||+|+||+|+.+|+..++...... ..++..+...++.++.||+++|.|+||.|+++||.+++.+.|+
T Consensus 95 ~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 174 (181)
T d1bjfa_ 95 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS 174 (181)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTH
T ss_pred HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCHH
T ss_conf 99999988760399971629999999998754110123677320117999999999968999896919999999986989
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=5.7e-20 Score=145.89 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=120.3
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 69100999999998062898513310046216----88999999999999995399998833199999999994068969
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg----~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
.+..++..+.+.|...++||.|+++||.+++. ......+++.+|..+ +.++ +|.|+++||+.++..+.....+
T Consensus 22 f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~-D~~~--~G~I~f~EF~~~~~~~~~~~~~ 98 (201)
T d1omra_ 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSF-DANS--DGTLDFKEYVIALHMTSAGKTN 98 (201)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTT-TSCS--SSEEEHHHHHHHHHHHHSSCGG
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCC--CCEEEEHHHHHHHHHHCCCCHH
T ss_conf 999999999999997796998649999999999668898799999999985-6699--9827531577888752220318
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9999999885689993462999999999642016------2013688799999999886199999751399999999819
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASAN------KLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~------~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
++++.+|++||+|++|.|+.+|+..++....... .+...+...++.++.||+++|.|+||.|+++||...+...
T Consensus 99 ~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 178 (201)
T d1omra_ 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN 178 (201)
T ss_dssp GSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
T ss_conf 99999999870478985289999999999874257655654202113699999999999488998979399999999879
Q ss_pred CC
Q ss_conf 98
Q 002711 290 PS 291 (889)
Q Consensus 290 p~ 291 (889)
|.
T Consensus 179 ~~ 180 (201)
T d1omra_ 179 KE 180 (201)
T ss_dssp HH
T ss_pred HH
T ss_conf 89
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4.2e-20 Score=146.74 Aligned_cols=150 Identities=14% Similarity=0.220 Sum_probs=118.0
Q ss_pred CCCCCCHHHHHHHHHCCC--CC--------CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 369100999999998062--89--------85133100462168899999999999999539999883319999999999
Q 002711 139 NVGTEGWGEVEKRFDELA--VD--------GMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQ 208 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld--~d--------G~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~ 208 (889)
..+.+++..+.++|..++ ++ |++++++|....+...+ ++.+++|++++..++ +|.|+|+||+.++..
T Consensus 10 ~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~l~~~-~~~~rif~~fd~~~~--~g~I~f~EFv~~l~~ 86 (180)
T d1xo5a_ 10 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKAN-PFKERICRVFSTSPA--KDSLSFEDFLDLLSV 86 (180)
T ss_dssp CSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHHHHTC-TTHHHHHHHHCCSTT--CCEECHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHCCCCCCCC-HHHHHHHHHCCCCCC--CCCCCHHHHHHHHHH
T ss_conf 99999999999999987867566546564542759998427454558-389999885067789--990869999999999
Q ss_pred HC-CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 40-68969999999988568999346299999999964201-62013688799999999886199999751399999999
Q 002711 209 IT-DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASA-NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 209 ~~-~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~-~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
++ ....+++++.+|++||+|++|+|+.+|+..++...... ......++++++.++.+|+++|.|+||.|+++||..++
T Consensus 87 ~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~ 166 (180)
T d1xo5a_ 87 FSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 166 (180)
T ss_dssp HSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 85259888999986016157999744199999999998714256645599999999999999589998919199999999
Q ss_pred HHCCC
Q ss_conf 81998
Q 002711 287 LQAPS 291 (889)
Q Consensus 287 ~~~p~ 291 (889)
.+.|.
T Consensus 167 ~~~P~ 171 (180)
T d1xo5a_ 167 SRSPD 171 (180)
T ss_dssp HHCHH
T ss_pred HHCHH
T ss_conf 96977
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.80 E-value=2.4e-19 Score=141.80 Aligned_cols=147 Identities=18% Similarity=0.181 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHCCCCCCCCCHHHHCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
Q ss_conf 100999999998062898513310046216---88999999999999995399998833199999999994068969999
Q 002711 142 TEGWGEVEKRFDELAVDGMLPKSSFGQCIG---MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARL 218 (889)
Q Consensus 142 ~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg---~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l 218 (889)
.++++.+.+.|+..++||+|+++||.++++ ...+...++++|.. .+.++ +|.|+++||+.++..+.....++++
T Consensus 20 ~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~-~D~d~--dG~I~f~Ef~~~l~~~~~~~~~~~~ 96 (189)
T d1jbaa_ 20 AAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRA-FDTNG--DNTIDFLEYVAALNLVLRGTLEHKL 96 (189)
T ss_dssp HHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHH-HCCSS--SSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCC--CCEEEEHHHHHHHHHHCCCCHHHHH
T ss_conf 99999999986414979855399999999984998429999999998-65699--9707631687888763036667789
Q ss_pred HHHHHHHCCCCCCEEEHHHHHHHHHHHHHC---CC-CHH-----HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 999988568999346299999999964201---62-013-----688799999999886199999751399999999819
Q 002711 219 ETFFDMVDKNLDGRITEEEVKEIIALSASA---NK-LSK-----IQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 219 ~~~F~~fDkd~dG~Is~eEl~~il~~~~~~---~~-l~~-----~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
+.+|++||.|++|.|+.+|+..++...... .. ... .....++.++.+|.++|.|+||+|+++||..++.+.
T Consensus 97 ~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 176 (189)
T d1jbaa_ 97 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD 176 (189)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHC
T ss_conf 99985541389971407678999998777520222211266513425559999999999589999959299999999869
Q ss_pred CC
Q ss_conf 98
Q 002711 290 PS 291 (889)
Q Consensus 290 p~ 291 (889)
|.
T Consensus 177 p~ 178 (189)
T d1jbaa_ 177 KW 178 (189)
T ss_dssp TT
T ss_pred HH
T ss_conf 89
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.78 E-value=1.1e-18 Score=137.47 Aligned_cols=149 Identities=15% Similarity=0.219 Sum_probs=119.4
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 69100999999998062898513310046216----88999999999999995399998833199999999994068969
Q 002711 140 VGTEGWGEVEKRFDELAVDGMLPKSSFGQCIG----MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFD 215 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg----~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~e 215 (889)
-+..++..+.+.|...+++|.|+.+||..++. .......++++|+.++ .++ +|.|+++||+.++..+.....+
T Consensus 10 ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D-~~~--~g~I~~~EFl~~~~~~~~~~~~ 86 (178)
T d1s6ca_ 10 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD-TTQ--TGSVKFEDFVTALSILLRGTVH 86 (178)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHC-TTC--SSCEEHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC-CCC--CCCCCHHHHHHHHHHHHCCCHH
T ss_conf 8999999999999877849981699999999994799987999999999977-899--9966679999999987115669
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 9999999885689993462999999999642016----201368879999999988619999975139999999981998
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASAN----KLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~----~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
++++.+|+.||.|++|+|+.+|+..++....... .....++..++.++.+|+++|.|+||.|+++||.+++.+.|.
T Consensus 87 ~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~ 166 (178)
T d1s6ca_ 87 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDN 166 (178)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCH
T ss_pred HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCHH
T ss_conf 99999987522589980559999989998875324444667767789999999999958999895909999999987989
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1e-18 Score=137.65 Aligned_cols=149 Identities=15% Similarity=0.240 Sum_probs=119.8
Q ss_pred CCCCCCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC-C
Q ss_conf 0001369100999999998062--898513310046216889999999999999953999988331999999999940-6
Q 002711 135 FITKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT-D 211 (889)
Q Consensus 135 ~i~~~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-~ 211 (889)
-|+++.+.++++++++.|+.+| ++|.|+++||..++.... .+.++++|..++ .++ +|.|+++||+.++.... .
T Consensus 5 ~~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~-~~~~~~l~~~~d-~~~--~g~i~~~EFl~~~~~~~~~ 80 (165)
T d1auib_ 5 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ-NPLVQRVIDIFD-TDG--NGEVDFKEFIEGVSQFSVK 80 (165)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHT-CTTHHHHHHHHC-TTC--SSSEEHHHHHHHHGGGCTT
T ss_pred HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CHHHHHHHHHHC-CCC--CHHHHHHHHHHHCCCCCCC
T ss_conf 770799999999999999988789989795999997660268-889999999973-231--0124466663210012210
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 8969999999988568999346299999999964201620136887999999998861999997513999999998199
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
....+.++.+|+.+|.|++|.|+.+|+++++..... ..++ .+..++.++.+|+++|.|+||.|+++||..+|....
T Consensus 81 ~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~-~~~~--~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~~ 156 (165)
T d1auib_ 81 GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLK--DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 156 (165)
T ss_dssp CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHT-TSSC--HHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-CCCC--HHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCC
T ss_conf 025789999998750243222328999999997504-5676--687899999999975889999592999999985688
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=9.4e-18 Score=131.31 Aligned_cols=140 Identities=21% Similarity=0.305 Sum_probs=111.4
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 01369100999999998062--89851331004621---68899999999999999539999883319999999999406
Q 002711 137 TKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD 211 (889)
Q Consensus 137 ~~~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~ 211 (889)
+++++++++.++++.|+.+| ++|.|+++||..++ |...++..+..++ ...+.++.+.+++++|...+.....
T Consensus 1 ~~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (146)
T d1lkja_ 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLM---NEIDVDGNHQIEFSEFLALMSRQLK 77 (146)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHH---HHHCSSSCCEEEHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHH---HHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9998999999999999997889989693999999998528998799998888---8763588654668999999998610
Q ss_pred -CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf -89699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 212 -QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 212 -~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...++.++.+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+|+++| |+||+|+|+||+++|.+
T Consensus 78 ~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g--~~~~------~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG--EKLT------DAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp CCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHT--CSCC------HHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC--CCCC------HHHHHHHHHHCC-CCCCEEEHHHHHHHHCC
T ss_conf 123799999999981889989295999999999808--7333------999999999666-99985869999998379
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.75 E-value=7e-18 Score=132.14 Aligned_cols=139 Identities=17% Similarity=0.303 Sum_probs=112.8
Q ss_pred CCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-CCC
Q ss_conf 369100999999998062--89851331004621---688999999999999995399998833199999999994-068
Q 002711 139 NVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI-TDQ 212 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~-~~~ 212 (889)
+++++++.++++.|+.+| ++|.|+.+||..++ +...+...+..++..+ +. +++|.|+|+||..++... ...
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~--~~~g~i~~~ef~~~~~~~~~~~ 78 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV-DA--DGNGTIDFPEFLSLMARKMKEQ 78 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH-CT--TCSSSEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHC-CC--CCCCCCCHHHHHHHHHHHHHCC
T ss_conf 89999999999999998089998187789999997317999799999998861-88--9998365899999999874126
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 213 ~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...++++.+|+.||+|++|.|+.+||+.++.... ..++ ++.+..+|+.+|.|+||.|+|+||.++|..
T Consensus 79 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~------~~~~~~i~~~~D~d~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 79 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG--EKLT------DDEVDEMIREADIDGDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT--CCCC------HHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH--HCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
T ss_conf 8399999999972789998197999999999875--3099------999999999858999886849999998629
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.73 E-value=4.2e-17 Score=127.08 Aligned_cols=134 Identities=10% Similarity=0.245 Sum_probs=107.1
Q ss_pred CCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCCC
Q ss_conf 69100999999998062--89851331004621---68899999999999999539999883319999999999-40689
Q 002711 140 VGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQ-ITDQS 213 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~~~~ 213 (889)
++++++.++++.|+.+| ++|.|+.+||..++ |...+.....+++ . + .+|.|+++||+..+.. +....
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~----~-~--~~~~i~~~eF~~~~~~~~~~~~ 73 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----K-E--APGPLNFTMFLSIFSDKLSGTD 73 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----T-T--SSSCCCHHHHHHHHHHHTCSCC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH----H-H--CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9989999999999997589997398589999998751389899997888----8-6--2575011112222210013420
Q ss_pred HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 6999999998856899934629999999996420162013688799999999886199999751399999999819
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 214 ~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
.++.++.+|+.||+|++|+|+.+||+.++... +..++ ++.++.+|+++|.| +|.|+|+||..+|+..
T Consensus 74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~--g~~lt------~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 74 SEETIRNAFAMFDEQETKKLNIEYIKDLLENM--GDNFN------KDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS--SSCCC------HHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC--CCCCC------HHHHHHHHHHHCCC-CCEECHHHHHHHHHCC
T ss_conf 34437774300102689865489999999970--34699------99999999984799-8999499999997148
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.72 E-value=5.5e-17 Score=126.30 Aligned_cols=139 Identities=23% Similarity=0.334 Sum_probs=109.9
Q ss_pred CCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH----
Q ss_conf 369100999999998062--89851331004621---688999999999999995399998833199999999994----
Q 002711 139 NVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI---- 209 (889)
Q Consensus 139 ~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~---- 209 (889)
.++.+++.++++.|+.+| ++|.|+.+||..++ +.......+.+++..++ .++ +|.+++.||.......
T Consensus 13 ~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d-~~~--~~~~~~~e~~~~~~~~~~~~ 89 (162)
T d1topa_ 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD-EDG--SGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC-TTS--CCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHEEC-CCC--CCCEEEEHHHHHHHHHHHHH
T ss_conf 199999999999999985899974827998777850588526888876543033-389--98832100234433334441
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 0689699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 210 TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 210 ~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
......+.++.+|+.||+|++|+|+.+||+.++..... ... ++.+..+|+.+|.|+||.|+|+||+++|..
T Consensus 90 ~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~--~~~------~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE--HVT------EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC--CCC------HHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC--CCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
T ss_conf 13586999999999878799987958999999874077--787------999999999858999992979999999870
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.72 E-value=2.9e-17 Score=128.08 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=108.2
Q ss_pred CCCCCHHHHHHHHHCCC----CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-
Q ss_conf 69100999999998062----89851331004621---68899999999999999539999883319999999999406-
Q 002711 140 VGTEGWGEVEKRFDELA----VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD- 211 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~ld----~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~- 211 (889)
++++++.++++.|+.+| +||.|+.+||..+| |...++.....+. ..+.+++|.|+|+||+.++.....
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~----~~~~~~~~~i~~~eFl~~~~~~~~~ 76 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG----GTHKMGEKSLPFEEFLPAYEGLMDC 76 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT----CCSSTTSCEECHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 998999999999999772799997599999999999842495276664554----4201455651101101112001111
Q ss_pred -CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC--CCCCCCHHHHHHHHHH
Q ss_conf -8969999999988568999346299999999964201620136887999999998861999--9975139999999981
Q 002711 212 -QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH--NLGYIELYNLEMLLLQ 288 (889)
Q Consensus 212 -~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d--~dG~Is~~EF~~~l~~ 288 (889)
....+.++.+|+.||+|++|+|+.+||+.++... +..++ ++.++.+++++|.+ ++|.|+|+||.++|+.
T Consensus 77 ~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~--g~~ls------~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 77 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL--GERLS------DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS--SSCCC------HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC--CCCCC------HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHC
T ss_conf 01477752023210333567633189999999981--89899------99999999985617999977879999999953
Q ss_pred CC
Q ss_conf 99
Q 002711 289 AP 290 (889)
Q Consensus 289 ~p 290 (889)
.|
T Consensus 149 ~p 150 (152)
T d1wdcc_ 149 GP 150 (152)
T ss_dssp CS
T ss_pred CC
T ss_conf 99
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.71 E-value=2e-18 Score=135.69 Aligned_cols=143 Identities=18% Similarity=0.238 Sum_probs=116.1
Q ss_pred CCCCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 01369100999999998062--89851331004621---68899999999999999539999883319999999999406
Q 002711 137 TKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD 211 (889)
Q Consensus 137 ~~~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~ 211 (889)
|.+++++++.++++.|+.+| +||.|+.+||..++ +...+......++.. .+.++ +|.|+++||+.++.....
T Consensus 1 ~~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~-~d~~~--~g~i~~~ef~~~~~~~~~ 77 (182)
T d1s6ia_ 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDA-ADIDK--SGTIDYGEFIAATVHLNK 77 (182)
T ss_dssp CCSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHH-TCTTC--SSEECHHHHHHHHTTSSS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH-HHCCC--CCCCHHHHHHHHHHHHCC
T ss_conf 998999999999999999818995979899999999972876322210024555-41011--123027899988875102
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 89699999999885689993462999999999642016201368879999999988619999975139999999981998
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
...++.++.+|+.+|.|++|+|+.+||++++.. .+++ ++.+..+|+.+|.|+||+|+|+||..+|++.+.
T Consensus 78 ~~~~e~l~~aF~~~D~d~~G~i~~~el~~~l~~----~gl~------~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~~ 147 (182)
T d1s6ia_ 78 LEREENLVSAFSYFDKDGSGYITLDEIQQACKD----FGLD------DIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147 (182)
T ss_dssp SCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTT----TTCC------TTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH----CCCC------HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCC
T ss_conf 165999999999986348986015666412653----1860------999999998861089984739999999986768
Q ss_pred C
Q ss_conf 6
Q 002711 292 Q 292 (889)
Q Consensus 292 ~ 292 (889)
.
T Consensus 148 ~ 148 (182)
T d1s6ia_ 148 N 148 (182)
T ss_dssp S
T ss_pred C
T ss_conf 9
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.71 E-value=6.4e-17 Score=125.83 Aligned_cols=142 Identities=22% Similarity=0.336 Sum_probs=111.0
Q ss_pred CCCCCCCCCHHHHHHHHHCCC--C-CCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 001369100999999998062--8-9851331004621---688999999999999995399998833199999999994
Q 002711 136 ITKNVGTEGWGEVEKRFDELA--V-DGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI 209 (889)
Q Consensus 136 i~~~~~~~~~~~l~~~F~~ld--~-dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~ 209 (889)
...+++.++..++++.|+.+| + ||.|+.+||..++ |...++....+++... +. ++.|.+++++|.......
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 80 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEV-DE--DGSGTVDFDEFLVMMVRS 80 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHH-CT--TSSSSBCHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHH-HC--CCCCCCCHHHHHHHHHHC
T ss_conf 887789999999999999983789998597799999999828877789999988876-12--688850300233444201
Q ss_pred ----CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ----0689699999999885689993462999999999642016201368879999999988619999975139999999
Q 002711 210 ----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEML 285 (889)
Q Consensus 210 ----~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~ 285 (889)
.....+++++.+|+.||+|++|+|+.+||++++.... ..++ ++.+..+|+++|.|+||.|+|+||..+
T Consensus 81 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~--~~ls------~~e~~~i~~~~D~d~dG~I~~~eF~~~ 152 (156)
T d1dtla_ 81 MKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETIT------EDDIEELMKDGDKNNDGRIDYDEFLEF 152 (156)
T ss_dssp HC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC----CCC------HHHHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHH
T ss_conf 11011112799999999976868998680999999986127--8999------999999999868999891869999999
Q ss_pred HHH
Q ss_conf 981
Q 002711 286 LLQ 288 (889)
Q Consensus 286 l~~ 288 (889)
|+.
T Consensus 153 l~g 155 (156)
T d1dtla_ 153 MKG 155 (156)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 847
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.2e-16 Score=122.31 Aligned_cols=134 Identities=14% Similarity=0.277 Sum_probs=108.1
Q ss_pred CCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-CCCCHH
Q ss_conf 100999999998062--89851331004621---688999999999999995399998833199999999994-068969
Q 002711 142 TEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI-TDQSFD 215 (889)
Q Consensus 142 ~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~-~~~~~e 215 (889)
+++.+++++.|+.+| ++|.|+.+||..++ +...+.....+++..+ +.++ +|.|+++||...+... ......
T Consensus 2 ~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~--~g~i~~~ef~~~~~~~~~~~~~~ 78 (141)
T d2obha1 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEI-DKEG--TGKMNFGDFLTVMTQKMSEKDTK 78 (141)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHH-TTTC--CSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCC--CCEECHHHHHHHHHHHHHHHCCH
T ss_conf 78999999999998689988184999987888618750278898777762-3478--98025699999999987500327
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 99999998856899934629999999996420162013688799999999886199999751399999999
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
+.++.+|..+|++++|.|+.+||+.++.... ..++ ++.+..+|+.+|.|+||.|+|+||.++|
T Consensus 79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g--~~l~------~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 79 EEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLT------DEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CCCC------HHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--CCCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHC
T ss_conf 9999999986646899834999999999958--9998------9999999998789989979499999769
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.69 E-value=5.2e-17 Score=126.42 Aligned_cols=139 Identities=13% Similarity=0.269 Sum_probs=107.1
Q ss_pred CCCCHHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCCCHHHH
Q ss_conf 9100999999998062--8985133100462168899999999999999539999883319999999999-406896999
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQ-ITDQSFDAR 217 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~~~~~ee~ 217 (889)
+++++.++++.|..+| ++|.|+.+||..+|..........+++..+... . +|.|+++||+.++.. ......++.
T Consensus 2 ~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~-~--~g~i~~~eF~~~~~~~~~~~~~~~~ 78 (145)
T d2mysb_ 2 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE-A--SGPINFTVFLTMFGEKLKGADPEDV 78 (145)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH-C--CCCEEECHHHHHHHHCCCCCCHHHH
T ss_conf 989999999999997789879898999999999918972058999999874-0--6861001234332000222122779
Q ss_pred HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 9999988568999346299999999964201620136887999999998861999997513999999998199
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 218 l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
++.+|+.||+|++|+|+.+||++++.... ..++ ++.+..+++++|.|++|.|+|.||..+|...+
T Consensus 79 l~~aF~~fD~~~~g~I~~~el~~~l~~~g--~~ls------~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~~ 143 (145)
T d2mysb_ 79 IMGAFKVLDPDGKGSIKKSFLEELLTTGG--GRFT------PEEIKNMWAAFPPDVAGNVDYKNICYVITHGE 143 (145)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCC
T ss_conf 99998724313550020799999999808--9999------99999999982999989281999999955588
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.68 E-value=2.9e-16 Score=121.55 Aligned_cols=134 Identities=16% Similarity=0.233 Sum_probs=101.7
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC---CCHHH
Q ss_conf 999999998062--89851331004621---68899999999999999539999883319999999999406---89699
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD---QSFDA 216 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~---~~~ee 216 (889)
..++++.|+.+| +||.|+.+||..++ |...+.....+++... +.+.+++|.|+++||..++..... ....+
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~-~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNP-SKEEMNAAAITFEEFLPMLQAAANNKDQGTFE 81 (145)
T ss_pred HHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
T ss_conf 79999999997689988098999999999863240233447889888-63114457402257788876543001333277
Q ss_pred HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+|+.||+|++|+|+.+||++++.... ..++ ++.++.+++. |.|+||.|+|+||.++|..
T Consensus 82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g--~~~~------~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 82 DFVEGLRVFDKEGNGTVMGAELRHVLATLG--EKMT------EEEVEELMKG-QEDSNGCINYEAFVKHIMS 144 (145)
T ss_pred HHHHHHHHHHCCCCCEECHHHHHHHHHHHC--CCCC------HHHHHHHHHH-CCCCCCEEEHHHHHHHHHC
T ss_conf 888877886117998783999999999818--9887------9999999852-6799990979999999963
|
| >d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Aromatic dioxygenase reductase-like domain: Methane monooxygenase component C, MmoC species: Methylococcus capsulatus [TaxId: 414]
Probab=99.65 E-value=3e-15 Score=114.90 Aligned_cols=129 Identities=12% Similarity=0.234 Sum_probs=90.8
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
....+||||||+||||++|+++++.... ..++++|+|++|+.+++ .|.++++++
T Consensus 7 ~~~p~vliagGtGItP~~s~l~~~~~~~-------------------------~~~~v~l~~~~r~~~d~-~~~~el~~l 60 (141)
T d1tvca2 7 GMAPRYFVAGGTGLAPVVSMVRQMQEWT-------------------------APNETRIYFGVNTEPEL-FYIDELKSL 60 (141)
T ss_dssp SSSCEEEEEESSTTHHHHHHHHHHHHHT-------------------------CCSCEEEEEECSSSTTC-CCHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHCC-------------------------CCCCEEEEEECCCCHHH-HHHHHHHHH
T ss_conf 9984899977440999999999999839-------------------------99835777511222013-548999888
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
++.. +.++++..+++..+. ...+.||+. +.+.+.+.... ....||+|
T Consensus 61 ~~~~--~~~~~~~~~~~~~~~----------------------------~~~~~g~~~-~~~~~~~~~~~--~~~~vyiC 107 (141)
T d1tvca2 61 ERSM--RNLTVKACVWHPSGD----------------------------WEGEQGSPI-DALREDLESSD--ANPDIYLC 107 (141)
T ss_dssp HHHS--SSCEEEECCSSCSSC----------------------------CSSSSSSSS-HHHHHHHHHSS--SSSEEEEE
T ss_pred HHHC--CCCCCCEEECCCCCC----------------------------CCCCCCHHH-HHHHHHCCCCC--CCCEEECC
T ss_conf 8614--410100120223567----------------------------677420268-99987401233--44213500
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 9726899999999842017987099995079
Q 002711 859 GAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 859 GP~~l~~~vr~~~~~~~~~~~~~~~fh~E~F 889 (889)
|||+|++++++.+.+.+. ..-.+|.|.|
T Consensus 108 Gp~~m~~~v~~~l~~~Gv---~~~~i~~E~F 135 (141)
T d1tvca2 108 GPPGMIDAACELVRSRGI---PGEQVFFEKF 135 (141)
T ss_dssp SSHHHHHHHHHHHHHHCC---CCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCC---CHHHEEEEEC
T ss_conf 879999999999998399---9899788746
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.63 E-value=2.4e-16 Score=122.07 Aligned_cols=125 Identities=22% Similarity=0.359 Sum_probs=97.0
Q ss_pred HHHHHHCCC--CCCCCCHHHHCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC---HHHHHH
Q ss_conf 999998062--898513310046216---889999999999999953999988331999999999940689---699999
Q 002711 148 VEKRFDELA--VDGMLPKSSFGQCIG---MNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQS---FDARLE 219 (889)
Q Consensus 148 l~~~F~~ld--~dG~Is~~ef~~~lg---~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~---~ee~l~ 219 (889)
.++.|+.+| +||.|+.+||..++. .......+..+|..+ +.++ +|.|+++||..++....... ....++
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~-D~~~--~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~ 78 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSI-DADG--NGEIDQNEFAKFYGSIQGQDLSDDKIGLK 78 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHH-CSSC--CSEEEHHHHHHHTTCSSCCSSHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999998689839785999999999738999999999988876-4015--54223322222222122222222222222
Q ss_pred HHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99988568999346299999999964201620136887999999998861999997513999999998
Q 002711 220 TFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 220 ~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
.+|+.+|+|++|+|+.+|++.++... . .+.+..+|+++|.|+||.|+++||.++|+
T Consensus 79 ~~F~~~D~~~~g~i~~~el~~~~~~~----~--------~~~~~~~~~~~D~d~dG~is~~EF~~~~l 134 (134)
T d1jfja_ 79 VLYKLMDVDGDGKLTKEEVTSFFKKH----G--------IEKVAEQVMKADANGDGYITLEEFLEFSL 134 (134)
T ss_dssp HHHHHHCCSSSSEEEHHHHHHHHTTT----T--------CHHHHHHHHHHHCSSSSEEEHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHC----C--------CHHHHHHHHHHCCCCCCCCCHHHHHHHHC
T ss_conf 22212333557713499998898862----7--------08899999997789999797999999709
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.63 E-value=1.8e-15 Score=116.26 Aligned_cols=126 Identities=19% Similarity=0.258 Sum_probs=102.6
Q ss_pred HHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999998062--89851331004621---68899999999999999539999883319999999999406896999999
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLET 220 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~ 220 (889)
.++++.|+.+| +||.|+.+||..+| +...+...+.+++..+ +.+. +|.|+++||...+.. ..+++.
T Consensus 18 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~-d~d~--~~~i~~~ef~~~~~~------~~~~~~ 88 (182)
T d1y1xa_ 18 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMY-DKNH--SGEITFDEFKDLHHF------ILSMRE 88 (182)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHH-CTTC--SSSBCHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC-CCCC--CCCCCCCCCCCCCCC------CCCCCC
T ss_conf 9999999997689849798999999999850468666655542011-2222--223343220001122------222211
Q ss_pred HHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99885689993462999999999642016201368879999999988619999975139999999981
Q 002711 221 FFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 221 ~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.|+.+|.|++|+|+.+||++++... +..++ ++.++.+|+++|.|+||.|+|+||..++..
T Consensus 89 ~F~~~D~~~~g~I~~~el~~~l~~~--g~~ls------~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~ 148 (182)
T d1y1xa_ 89 GFRKRDSSGDGRLDSNEVRAALLSS--GYQVS------EQTFQALMRKFDRQRRGSLGFDDYVELSIF 148 (182)
T ss_dssp HHHHHCTTSSSCBCHHHHHHHHHTT--SCCCC------HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred CHHCCCCCCCHHHHHHHHHHHHHHH--CCCHH------HHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 0000222455134457788778870--87136------889998886415589998099999999999
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.63 E-value=5.4e-16 Score=119.75 Aligned_cols=131 Identities=18% Similarity=0.326 Sum_probs=103.3
Q ss_pred HHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH------CCCCHHH
Q ss_conf 999998062--89851331004621---688999999999999995399998833199999999994------0689699
Q 002711 148 VEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQI------TDQSFDA 216 (889)
Q Consensus 148 l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~------~~~~~ee 216 (889)
+++.|..+| ++|.|+.+||..++ |...++....+++....+.+. +|.|+++||...+... ......+
T Consensus 4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~--~~~i~~~ef~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1m45a_ 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRD--ASSLTLDQITGLIEVNEKELDATTKAKTE 81 (146)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC----CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHHHCCCCCCCCCCHHH
T ss_conf 9999999818996979999999999984996027887644201334322--22111000221011110111111220477
Q ss_pred HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+..+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+|+.+|.|+||.|+|+||..+|.+
T Consensus 82 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g--~~l~------~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 82 DFVKAFQVFDKESTGKVSVGDLRYMLTGLG--EKLT------DAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHHHHST--TCCC------HHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHCCCC--CCCH------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
T ss_conf 899988740114565412464644300148--8615------999999999868899996979999999975
|
| >d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Flavohemoglobin, C-terminal domain domain: Flavohemoglobin, C-terminal domain species: Alcaligenes eutrophus [TaxId: 106590]
Probab=99.63 E-value=2.5e-15 Score=115.40 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=90.9
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 89988999993755665999999999988631100024445798876899999862059999993888716579999999
Q 002711 698 KDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNE 777 (889)
Q Consensus 698 ~~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~e 777 (889)
.....+||||||+||||++|++++++.+ ..++++++|++|+.+++. +.+.+.+
T Consensus 3 d~~~plvliagGtGIaP~~sil~~~~~~--------------------------~~~~i~li~~~r~~~~l~-~~~~~~~ 55 (142)
T d1cqxa3 3 DAKTPIVLISGGVGLTPMVSMLKVALQA--------------------------PPRQVVFVHGARNSAVHA-MRDRLRE 55 (142)
T ss_dssp TCCSCEEEEESSCCHHHHHHHHHHHTCS--------------------------SCCCEEEEEEESCSSSCH-HHHHHHH
T ss_pred CCCCCEEEEECCEEHHHHHHHHHHHHHC--------------------------CCCCEEEEEECCCHHHHH-HHHHHHH
T ss_conf 9999789998654489999999999976--------------------------998389984205756510-0899988
Q ss_pred HHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 98445998199999650445678724689998774310138876445883212047999889999998547999199999
Q 002711 778 VAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFY 857 (889)
Q Consensus 778 l~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~ 857 (889)
+++.. ..+.++.++++...+.... ....+.++.....+..... .....||+
T Consensus 56 ~~~~~--~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~----~~~~~vyi 106 (142)
T d1cqxa3 56 AAKTY--ENLDLFVFYDQPLPEDVQG-----------------------RDYDYPGLVDVKQIEKSIL----LPDADYYI 106 (142)
T ss_dssp HHHHC--TTEEEEEEESSCCTTCCBT-----------------------TTBSEESSCCGGGSHHHHC----CTTCEEEE
T ss_pred HHHHC--CCEEEEEEECCCCCCCCCC-----------------------CCCCCHHHHHHHHHHHHCC----CCCCEEEE
T ss_conf 99747--8728999972367766520-----------------------1222003648999985124----57854999
Q ss_pred ECCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 09726899999999842017987099995079
Q 002711 858 CGAPGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 858 CGP~~l~~~vr~~~~~~~~~~~~~~~fh~E~F 889 (889)
|||++|++++++.+.+.+. ..-.+|.|.|
T Consensus 107 CGp~~m~~~v~~~L~~~G~---~~~~i~~E~F 135 (142)
T d1cqxa3 107 CGPIPFMRMQHDALKNLGI---HEARIHYEVF 135 (142)
T ss_dssp ESSHHHHHHHHHHHHHTTC---CGGGEEECCC
T ss_pred ECCHHHHHHHHHHHHHCCC---CHHHEEEEEC
T ss_conf 7881689999999998599---8887999715
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.62 E-value=9.4e-15 Score=111.63 Aligned_cols=129 Identities=16% Similarity=0.298 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHH
Q ss_conf 00999999998062--89851331004621---688-9999999999999953999988331999999999940689699
Q 002711 143 EGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDA 216 (889)
Q Consensus 143 ~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee 216 (889)
.+-+.|.+.|+.+| ++|.|+.+||..++ +.. .+...+..++.. .+.++ +|.|+++||+.++... .
T Consensus 16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~-~D~d~--~g~i~~~EFl~~~~~~------~ 86 (181)
T d1hqva_ 16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISM-FDREN--KAGVNFSEFTGVWKYI------T 86 (181)
T ss_dssp SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHH-HCCSS--SSSBCHHHHHHHHHHH------H
T ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHC-CCCCC--CCCHHHHHHHHHHHHC------C
T ss_conf 4599999999998589998193999999999817985669999998512-46553--3100246777653101------2
Q ss_pred HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+++.+|+.+|+|++|.|+.+||+.++.... ..++ ++.++.+++++|.+++|+|+|+||..++..
T Consensus 87 ~~~~~f~~~D~~~~G~i~~~el~~~l~~~~--~~l~------~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~ 150 (181)
T d1hqva_ 87 DWQNVFRTYDRDNSGMIDKNELKQALSGFG--YRLS------DQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150 (181)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHHHHHT--BCCC------HHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCH------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 221101112224441024689998898708--7401------578998999817799995829999999999
|
| >d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: cytochrome b5 reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=3.3e-15 Score=114.58 Aligned_cols=134 Identities=12% Similarity=0.163 Sum_probs=91.6
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 97799989988998899999375566599999999998863110002444579887689999986205999999388871
Q 002711 688 GPYGAPAQDYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGS 767 (889)
Q Consensus 688 GPyG~~~~~~~~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~ 767 (889)
.|++........+++++|||||+||||++|++++++.+.. ..++++|+|++|+.++
T Consensus 6 ~p~~~~~~~~~~~k~i~lIagGtGItP~~s~l~~~l~~~~------------------------~~~~i~L~~~~r~~~~ 61 (147)
T d1umka2 6 RPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD------------------------DHTVCHLLFANQTEKD 61 (147)
T ss_dssp CSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT------------------------CCCEEEEEEEESSGGG
T ss_pred CCCCCCCCCCCCCCEEEEEECCEECCHHHHHHHHHHHCCC------------------------CCCEEEEEEEECCCCC
T ss_conf 4788887531357769999788531658999999996689------------------------9855999998376542
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 65799999999844599819999965044567872468999877431013887644588321204799988999999854
Q 002711 768 FEWFRGVMNEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVK 847 (889)
Q Consensus 768 ~~wf~~~l~el~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~ 847 (889)
+ .|.+++.++++... ..+.++..+++..+. ...+.||.+-..+ .+....
T Consensus 62 ~-~~~~el~~l~~~~~-~~~~~~~~~~~~~~~----------------------------~~~~~g~~~~~~l-~~~~~~ 110 (147)
T d1umka2 62 I-LLRPELEELRNKHS-ARFKLWYTLDRAPEA----------------------------WDYGQGFVNEEMI-RDHLPP 110 (147)
T ss_dssp C-TTHHHHHHHHHHCT-TTEEEEEEESSCCSS----------------------------CSSEESSCCHHHH-HHHSCC
T ss_pred C-HHHHHHHHHHHHCC-CCEEEEEEECCCCCC----------------------------CCCCEEEHHHHHH-HHHCCC
T ss_conf 0-23788765565257-605999984234557----------------------------6663322389999-975678
Q ss_pred CCCCEEEEEEECCHHHHHH-HHHHHHHHHCC
Q ss_conf 7999199999097268999-99999842017
Q 002711 848 HTDERVGVFYCGAPGLTGE-LRRLSQDFSRK 877 (889)
Q Consensus 848 ~~~~~v~V~~CGP~~l~~~-vr~~~~~~~~~ 877 (889)
. ..+..||+|||++|++. ++..+.+.+..
T Consensus 111 ~-~~~~~vyiCGP~~m~~~~~~~~L~~~G~~ 140 (147)
T d1umka2 111 P-EEEPLVLMCGPPPMIQYACLPNLDHVGHP 140 (147)
T ss_dssp G-GGCCEEEEESCHHHHHHTTHHHHHHHTCC
T ss_pred C-CCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 7-68828999499999999999999985998
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.61 E-value=1.6e-15 Score=116.64 Aligned_cols=140 Identities=13% Similarity=0.151 Sum_probs=102.2
Q ss_pred CCCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-
Q ss_conf 1369100999999998062--89851331004621---68899999999999999539999883319999999999406-
Q 002711 138 KNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD- 211 (889)
Q Consensus 138 ~~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~- 211 (889)
..++.++...+.+.|..+| ++|.|+.+||..+| +...+...+..++..+ +.++ +|.|+|.||...+.....
T Consensus 114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~--~g~i~~~ef~~~~~~~~~~ 190 (321)
T d1ij5a_ 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMV-ENDT--KGRMSYITLVAVANDLAAL 190 (321)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHH-HHCC--SSTHHHHHHTTSHHHHHTS
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHH-HHCC--CCCCCCHHHHHHHHHHHHH
T ss_conf 439999999999999997699989083999999999818866599999999998-5337--8532311110011123344
Q ss_pred -----------------------------CC-----------------------------HHHHHHHHHHHHCCCCCCEE
Q ss_conf -----------------------------89-----------------------------69999999988568999346
Q 002711 212 -----------------------------QS-----------------------------FDARLETFFDMVDKNLDGRI 233 (889)
Q Consensus 212 -----------------------------~~-----------------------------~ee~l~~~F~~fDkd~dG~I 233 (889)
.. ....+..+|..+|+|++|+|
T Consensus 191 ~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~I 270 (321)
T d1ij5a_ 191 VADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQL 270 (321)
T ss_dssp CCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSE
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 68888875115531025777653001112121889998875420332121122210000123688999998922899978
Q ss_pred EHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 299999999964201620136887999999998861999997513999999998
Q 002711 234 TEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 234 s~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
+.+||+.++..... ..++ ++.+..+|..+|.|+||+|+|+||..+|.
T Consensus 271 s~~E~~~~l~~~~~-~~~~------~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 271 SKEEVQKVLEDAHI-PESA------RKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp EHHHHHHHHHHTTC-CGGG------CSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred CHHHHHHHHHHCCC-CCCC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 69999999998389-8586------99999999986899998092999999999
|
| >d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Aromatic dioxygenase reductase-like domain: Benzoate dioxygenase reductase species: Acinetobacter sp. [TaxId: 472]
Probab=99.59 E-value=2.4e-15 Score=115.48 Aligned_cols=125 Identities=11% Similarity=0.151 Sum_probs=84.9
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88999993755665999999999988631100024445798876899999862059999993888716579999999984
Q 002711 701 DVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAE 780 (889)
Q Consensus 701 ~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el~~ 780 (889)
+.+||||||+||||++|+++++.... ..++++|+|++|+.+++ .|.++++++++
T Consensus 6 rplv~IAgG~GItP~~s~l~~~~~~~-------------------------~~~~i~l~~~~r~~~d~-~~~~el~~l~~ 59 (133)
T d1krha2 6 RPVLMLAGGTGIAPFLSMLQVLEQKG-------------------------SEHPVRLVFGVTQDCDL-VALEQLDALQQ 59 (133)
T ss_dssp SCEEEEEEGGGHHHHHHHHHHHHHHC-------------------------CSSCEEEEEEESSGGGC-CCHHHHHHHHH
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCC-------------------------CCCCEEEEEEECCHHHH-HHHHHHHHHHH
T ss_conf 97999994582999999999999849-------------------------99966899862106677-79999999987
Q ss_pred HCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 45998199999650445678724689998774310138876445883212047999889999998547999199999097
Q 002711 781 YDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGA 860 (889)
Q Consensus 781 ~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP 860 (889)
.. ++++++..++......+ ..|+.+ +.+.+.... .....||+|||
T Consensus 60 ~~--~~~~~~~~~s~~~~~~~-----------------------------~~g~v~-~~i~~~~~~---~~~~~vyiCGp 104 (133)
T d1krha2 60 KL--PWFEYRTVVAHAESQHE-----------------------------RKGYVT-GHIEYDWLN---GGEVDVYLCGP 104 (133)
T ss_dssp HC--TTEEEEEEETTCCSSSS-----------------------------EESCSG-GGCCGGGGG---GGCSEEEEEEE
T ss_pred HC--CCEEEEEEEECCCCCCC-----------------------------CCCHHH-HHHHHHHCC---CCCCEEEEECC
T ss_conf 48--76035664203441002-----------------------------111227-999875134---44431898798
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 26899999999842017987099995079
Q 002711 861 PGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 861 ~~l~~~vr~~~~~~~~~~~~~~~fh~E~F 889 (889)
++|++++++.+.+.+.. .-.+|.|.|
T Consensus 105 ~~m~~~v~~~L~~~Gv~---~~~i~~E~F 130 (133)
T d1krha2 105 VPMVEAVRSWLDTQGIQ---PANFLFEKF 130 (133)
T ss_dssp HHHHHHHHHHHHHHTCC---CSEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCC---HHHEEEEEC
T ss_conf 99999999999985999---899899834
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.58 E-value=1.1e-15 Score=117.65 Aligned_cols=127 Identities=16% Similarity=0.247 Sum_probs=98.6
Q ss_pred HHHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC---CCCHHHH
Q ss_conf 99999998062--89851331004621---6889999999999999953999988331999999999940---6896999
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT---DQSFDAR 217 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~---~~~~ee~ 217 (889)
.+.++.|+.+| +||.|+.+||..+| |...+... +.. ++. +. +|.|+++||+.++.... .....+.
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~e---i~~-~~~-~~--~~~i~~~eF~~~~~~~~~~~~~~~~~~ 77 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE---ITE-IES-TL--PAEVDMEQFLQVLNRPNGFDMPGDPEE 77 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHH---HHH-HHT-TS--CSSEEHHHHHHHHCTTSSSSSSCCHHH
T ss_pred HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH---HHH-HHC-CC--CCCCCCHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99999999977899981979999999999874168874---000-000-22--223440123221223210000337999
Q ss_pred HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 218 LETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 218 l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.+|+.||+|++|+|+.+||++++.... ..++ ++.++.+++.+|.| ||.|+|+||+.+|..
T Consensus 78 l~~aF~~~D~d~~G~I~~~el~~~l~~~g--~~lt------~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 78 FVKGFQVFDKDATGMIGVGELRYVLTSLG--EKLS------NEEMDELLKGVPVK-DGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHTTCSSCSSCCCHHHHHHHHHHHH--SCSC------HHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCC-CCEEEHHHHHHHHHC
T ss_conf 99999987116887253999999998818--9998------99999999963789-999969999999844
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.58 E-value=6.6e-15 Score=112.64 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=97.9
Q ss_pred CCCCHH-HHHHHHHCCC-CCCCCCHHHHCCCCCCC-----------CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 910099-9999998062-89851331004621688-----------9999999999999953999988331999999999
Q 002711 141 GTEGWG-EVEKRFDELA-VDGMLPKSSFGQCIGMN-----------ESKDFASELFDALARRRGLTSSSITKSELRGFWE 207 (889)
Q Consensus 141 ~~~~~~-~l~~~F~~ld-~dG~Is~~ef~~~lg~~-----------~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~ 207 (889)
+++++. .+++.|+.+| +||.|+.+||..+|... .+.+.++.++.. .|.++ +|.|+++||...+.
T Consensus 14 s~~~~~~~~r~~F~~~d~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~-~D~d~--~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 14 SEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNL-MDRDG--NGKLGLVEFNILWN 90 (188)
T ss_dssp -------------CCCCCSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHH-HCC----CCCCCSSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-HCCCC--CCCCCHHHHHHHHH
T ss_conf 9899999999999998089899889999999998076533212455899999999998-66789--98352899998875
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 94068969999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 208 QITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 208 ~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
.+ +.++.+|+.||+|++|.|+.+||+.++.... ..++ ++....+++. |.|++|.|+|+||..+|.
T Consensus 91 ~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g--~~~~------~~~~~~l~~~-~~~~dg~i~f~eFi~~~~ 155 (188)
T d1qxpa2 91 RI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG--FKLP------CQLHQVIVAR-FADDELIIDFDNFVRCLV 155 (188)
T ss_dssp HH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTT--EECC------HHHHHHHHHH-TSCSSSBCCHHHHHHHHH
T ss_pred HH------HHHHHHHHHHCCCCCCEECHHHHHHHHHHHH--HCCC------HHHHHHHHHH-HCCCCCCCCHHHHHHHHH
T ss_conf 42------8999999982889998787999999999866--3399------9999999987-458998297999999999
Q ss_pred H
Q ss_conf 1
Q 002711 288 Q 288 (889)
Q Consensus 288 ~ 288 (889)
.
T Consensus 156 ~ 156 (188)
T d1qxpa2 156 R 156 (188)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.57 E-value=1.5e-14 Score=110.33 Aligned_cols=99 Identities=17% Similarity=0.267 Sum_probs=76.4
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH-HCCCCHHHHHHH
Q ss_conf 9999999953999988331999999999940689699999999885689993462999999999642-016201368879
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSA-SANKLSKIQERV 258 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~-~~~~l~~~~e~~ 258 (889)
+++..++...+. +|.|+|+||+..+. .....++.++.+|+.||+|++|+|+.+||+.++.... .+..++
T Consensus 9 ~di~~~~~~~~~--~G~idf~eF~~~~~--~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~------ 78 (109)
T d5pala_ 9 DDINKAISAFKD--PGTFDYKRFFHLVG--LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN------ 78 (109)
T ss_dssp HHHHHHHHHTCS--TTCCCHHHHHHHHT--CTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC------
T ss_pred HHHHHHHHHCCC--CCCCCHHHHHHHHH--HCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCCCCC------
T ss_conf 999999985489--99495999999997--52798999999976155899984969999999998200467688------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999988619999975139999999981
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 79 ~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 79 DTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
T ss_conf 899999999808898997949999999970
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.1e-14 Score=109.27 Aligned_cols=122 Identities=19% Similarity=0.317 Sum_probs=95.3
Q ss_pred HHHHHHCCC-CCCCCCHHHHCCCC---CCCC-----CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
Q ss_conf 999998062-89851331004621---6889-----99999999999995399998833199999999994068969999
Q 002711 148 VEKRFDELA-VDGMLPKSSFGQCI---GMNE-----SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARL 218 (889)
Q Consensus 148 l~~~F~~ld-~dG~Is~~ef~~~l---g~~~-----~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l 218 (889)
+.+.|++++ .||.|+.+||+++| +... +.+.++.++.. .|.++ +|.|+++||+..+.. .+.+
T Consensus 2 ~~~~F~~~a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~-~D~~~--~G~i~~~EF~~l~~~------~~~~ 72 (165)
T d1k94a_ 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAM-LDRDH--TGKMGFNAFKELWAA------LNAW 72 (165)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHH-HCTTC--SSCBCHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HCCCC--CCCCCHHHHHHHHHC------CCHH
T ss_conf 68999996699997879999999998189977664799999999998-57899--972758999887621------2023
Q ss_pred HHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 219 ETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 219 ~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+|+.||+|++|+|+.+||+.++... +..++ ++.++.++..+|. +|.|+|+||..+|.+
T Consensus 73 ~~~F~~fD~d~sG~I~~~El~~~l~~~--G~~l~------~~~~~~l~~~~d~--~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 73 KENFMTVDQDGSGTVEHHELRQAIGLM--GYRLS------PQTLTTIVKRYSK--NGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHCTTCCSBCCHHHHHHHHHHT--TCCCC------HHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEECHHHHHHHHHHH--HHCCC------HHHHHHHHHHCCC--CCCCCHHHHHHHHHH
T ss_conf 789998389999847699999999985--31299------9999999999399--996959999999999
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.57 E-value=6.9e-15 Score=112.49 Aligned_cols=130 Identities=15% Similarity=0.228 Sum_probs=98.6
Q ss_pred CCCCH-HHHHHHHHCCC-CCCCCCHHHHCCCCC---C--------CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 91009-99999998062-898513310046216---8--------89999999999999953999988331999999999
Q 002711 141 GTEGW-GEVEKRFDELA-VDGMLPKSSFGQCIG---M--------NESKDFASELFDALARRRGLTSSSITKSELRGFWE 207 (889)
Q Consensus 141 ~~~~~-~~l~~~F~~ld-~dG~Is~~ef~~~lg---~--------~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~ 207 (889)
++++. ..+++.|+.+| +||.|+.+||..+|. . .-+...+..++.. .+.++ +|.|+++||...+.
T Consensus 12 ~~~~~~~~~r~~F~~~d~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~-~D~d~--~G~I~~~EF~~~~~ 88 (186)
T d1df0a1 12 NEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDM-LDEDG--SGKLGLKEFYILWT 88 (186)
T ss_dssp CCSCSCHHHHHHHHHHHGGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHH-HCCSS--SSEECHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-HCCCC--CCCCCHHHHHHHHH
T ss_conf 9799999999999997699890969999999998366644211245899999999999-75799--98454888899987
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 94068969999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 208 QITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 208 ~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
.. +.++.+|+.||+|++|+|+.+||++++.... ..++ ++.+ .++.+.|.|++|.|+|+||..+|.
T Consensus 89 ~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g--~~~~------~~~~-~~~~~~d~d~dg~I~f~eFi~~~~ 153 (186)
T d1df0a1 89 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAG--FKLP------CQLH-QVIVARFADDELIIDFDNFVRCLV 153 (186)
T ss_dssp HH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTT--EECC------HHHH-HHHHHHHCCSTTEECHHHHHHHHH
T ss_pred HH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH--HCCC------HHHH-HHHHHHHCCCCCEEEHHHHHHHHH
T ss_conf 67------9999998851779998504999999999977--5166------8899-999999727898181999999999
Q ss_pred H
Q ss_conf 1
Q 002711 288 Q 288 (889)
Q Consensus 288 ~ 288 (889)
+
T Consensus 154 ~ 154 (186)
T d1df0a1 154 R 154 (186)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.56 E-value=5.5e-14 Score=106.59 Aligned_cols=140 Identities=18% Similarity=0.153 Sum_probs=100.1
Q ss_pred CCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC--------CCCCCHHHH-HHHHHHHHH-HCCCCCCCCCHHHHHHHHHH
Q ss_conf 9100999999998062--89851331004621--------688999999-999999995-39999883319999999999
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCI--------GMNESKDFA-SELFDALAR-RRGLTSSSITKSELRGFWEQ 208 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l--------g~~~~~~~~-~~lf~~l~~-~d~~~~G~Id~~EF~~~~~~ 208 (889)
..+.+++++++|+.+| +||.|+.+||..++ +........ ..+.+.... .+....+.|+++||...+..
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH
T ss_conf 99999999999999859977967099999999999999849994067889999998753012268875105999999998
Q ss_pred HCC-----------CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 406-----------896999999998856899934629999999996420162013688799999999886199999751
Q 002711 209 ITD-----------QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI 277 (889)
Q Consensus 209 ~~~-----------~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I 277 (889)
... ....+.++.+|+++|+|++|+|+.+|++.++.... ..++ ++.++.+|+++|.|+||.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g--~~~~------~~~~~~lf~~~D~d~dG~I 160 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISG--ISPS------QEDCEATFRHCDLDNAGDL 160 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHS--SCCC------HHHHHHHHHHSCCCTTSCE
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCCE
T ss_conf 8777653013122789999999999997327997100201477888617--9999------9999999998389999959
Q ss_pred CHHHHHHHHHH
Q ss_conf 39999999981
Q 002711 278 ELYNLEMLLLQ 288 (889)
Q Consensus 278 s~~EF~~~l~~ 288 (889)
+++||..++.+
T Consensus 161 s~~EF~~~~~~ 171 (189)
T d1qv0a_ 161 DVDEMTRQHLG 171 (189)
T ss_dssp EHHHHHHHHHH
T ss_pred EHHHHHHHHHH
T ss_conf 29999999997
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.54 E-value=2.9e-14 Score=108.37 Aligned_cols=128 Identities=13% Similarity=0.207 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHCCC-CCCCCCHHHHCCCCC---C--------CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 00999999998062-898513310046216---8--------89999999999999953999988331999999999940
Q 002711 143 EGWGEVEKRFDELA-VDGMLPKSSFGQCIG---M--------NESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT 210 (889)
Q Consensus 143 ~~~~~l~~~F~~ld-~dG~Is~~ef~~~lg---~--------~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~ 210 (889)
+++.++++.|+.+| +||.|+.+||..+|. . ..+...+..++.. .+.++ +|.|+++||+..+..
T Consensus 1 ee~~~~r~~F~~~d~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-~d~d~--~g~i~~~ef~~~~~~-- 75 (173)
T d1alva_ 1 EEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAV-MDSDT--TGKLGFEEFKYLWNN-- 75 (173)
T ss_dssp CHHHHHHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHH-HCTTC--SSSBCHHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH-HCCCC--CCCCCCHHHHHHHHH--
T ss_conf 9699999999998599790889999999998087764344312799999999998-54689--876440234334322--
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 689699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 211 ~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...++.+|+.||+|++|.|+.+|++.++.... ..++ ++.++ .|.+.|.|++|.|+++||+.+|.+
T Consensus 76 ----~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g--~~~~------~~~~~-~~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 76 ----IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG--FHLN------EHLYS-MIIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ----HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHT--CCCC------HHHHH-HHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHCCCCCCEECHHHHHHHHHHHH--HHHH------HHHHH-HHHCCCCCCCCEEEHHHHHHHHHH
T ss_conf ----26788899970657998066999999999988--7658------99998-853122379976759999999999
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.9e-15 Score=116.15 Aligned_cols=131 Identities=17% Similarity=0.258 Sum_probs=97.3
Q ss_pred HHHHHHHCCC--CCCCCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC---CCHHHHH
Q ss_conf 9999998062--89851331004621---68899999999999999539999883319999999999406---8969999
Q 002711 147 EVEKRFDELA--VDGMLPKSSFGQCI---GMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD---QSFDARL 218 (889)
Q Consensus 147 ~l~~~F~~ld--~dG~Is~~ef~~~l---g~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~---~~~ee~l 218 (889)
++++.|+.+| ++|.|+.+||..++ |...++....+++...+. +.+++|.|+++||..++..... ....+.+
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~-~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l 79 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKS-DELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 79 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCH-HHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred CHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHC-CCCCCCCEEEECCCHHHHHHHHHCCCCHHHHH
T ss_conf 98999999808998849899999999984469999999999987730-31447833110000145766410100379999
Q ss_pred HHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 219 ETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 219 ~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
+.+|+.||+|++|+|+.+||+.++... +..++ ++.++.+++. |.|+||.|+|+||.++|+
T Consensus 80 ~~aF~~~D~d~~G~I~~~el~~~l~~~--g~~~~------~~e~~~l~~~-~~d~dg~I~~~eF~~~ll 139 (139)
T d1w7jb1 80 LEGFRVFDKEGNGKVMGAELRHVLTTL--GEKMT------EEEVETVLAG-HEDSNGCINYEAFLKHIL 139 (139)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHHS--SSCCC------HHHHHHHHTT-CCCTTSEEEHHHHHHHTC
T ss_pred HHHHHHCCCCCCCEEEHHHHHHHHHHH--CCCCC------HHHHHHHHHH-CCCCCCEEEHHHHHHHHC
T ss_conf 986340257999848299999999980--89998------9999999843-879999096999999759
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=5.8e-14 Score=106.45 Aligned_cols=129 Identities=15% Similarity=0.246 Sum_probs=97.1
Q ss_pred CCCCHHHHHHHHHCCC-CCCCCCHHHHCCCC---CCCC-----CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 9100999999998062-89851331004621---6889-----9999999999999539999883319999999999406
Q 002711 141 GTEGWGEVEKRFDELA-VDGMLPKSSFGQCI---GMNE-----SKDFASELFDALARRRGLTSSSITKSELRGFWEQITD 211 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld-~dG~Is~~ef~~~l---g~~~-----~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~ 211 (889)
+.++...+++.|+.+| +||.|+.+||..+| +... +.+.+..++.. .+.|+ +|.|+++||+..+..
T Consensus 2 p~~~~~~~~~~F~~~~~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~-~D~d~--~G~I~f~EF~~~~~~--- 75 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSM-LDRDM--SGTMGFNEFKELWAV--- 75 (172)
T ss_dssp TTCCCCTTHHHHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHH-HCTTC--SSCEEHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HCCCC--CCCEEHHHHHHHHHH---
T ss_conf 951189999999996798998979999999998499978564799999999998-77899--984616778999875---
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...+..+|+.||+|++|.|+.+|++.++.... ..++ ++.+..+++++|. +|.|+++||..+|.+
T Consensus 76 ---~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g--~~ls------~~~~~~l~~~~d~--~g~i~~~eF~~~~~~ 139 (172)
T d1juoa_ 76 ---LNGWRQHFISFDTDRSGTVDPQELQKALTTMG--FRLS------PQAVNSIAKRYST--NGKITFDDYIACCVK 139 (172)
T ss_dssp ---HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTT--CCCC------HHHHHHHHHHTCS--SSSEEHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH--HHHH------HHHHHHHHHHHHH--CCCCCHHHHHHHHHH
T ss_conf ---25566789974768999687999999999988--7301------9999999999873--599179999999999
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.53 E-value=1.9e-13 Score=103.06 Aligned_cols=135 Identities=20% Similarity=0.259 Sum_probs=98.7
Q ss_pred HHHHHHHHCCC--CCCCCCHHHHCCCC-------CCCCCHHHHHHHHH--------HHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999998062--89851331004621-------68899999999999--------999539999883319999999999
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCI-------GMNESKDFASELFD--------ALARRRGLTSSSITKSELRGFWEQ 208 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Is~~ef~~~l-------g~~~~~~~~~~lf~--------~l~~~d~~~~G~Id~~EF~~~~~~ 208 (889)
+++++.|+.+| +||.|+.+||..++ +..........+.. .....+.+.+|.|++.++...+..
T Consensus 7 ~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 86 (176)
T d1nyaa_ 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTEN 86 (176)
T ss_dssp HHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999986998796849999999999998727764189999999999889999998746789985447888878765
Q ss_pred HCCCC--------HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 40689--------6999999998856899934629999999996420162013688799999999886199999751399
Q 002711 209 ITDQS--------FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELY 280 (889)
Q Consensus 209 ~~~~~--------~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~ 280 (889)
..... ..+.++.+|.+||.|+||.|+.+||+.++... +++ ++.++.+|+.+|.|+||.|+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~----~~~------~~~~~~~f~~~D~d~dG~i~~~ 156 (176)
T d1nyaa_ 87 LIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL----GMS------KAEAAEAFNQVDTNGNGELSLD 156 (176)
T ss_dssp HHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT----TCC------HHHHHHHHHHHCTTCSSEEEHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC----CCC------HHHHHHHHHHHCCCCCCCEEHH
T ss_conf 422221222677789999999998812798234599999999823----871------9999999999779988968399
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998199
Q 002711 281 NLEMLLLQAP 290 (889)
Q Consensus 281 EF~~~l~~~p 290 (889)
||..++...-
T Consensus 157 Ef~~~~~~~~ 166 (176)
T d1nyaa_ 157 ELLTAVRDFH 166 (176)
T ss_dssp HHHHHHSCCS
T ss_pred HHHHHHHHHH
T ss_conf 9999999983
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.53 E-value=2.7e-14 Score=108.59 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=76.8
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH-HCCCCHHHHHHH
Q ss_conf 9999999953999988331999999999940689699999999885689993462999999999642-016201368879
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSA-SANKLSKIQERV 258 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~-~~~~l~~~~e~~ 258 (889)
+++..+++..+.+ |.|+|+||+..+.. ....++.++.+|+.||+|++|+|+.+||+.++.... .+..++
T Consensus 9 eeI~~~~~~~d~d--G~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls------ 78 (109)
T d1pvaa_ 9 DDIKKALDAVKAE--GSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT------ 78 (109)
T ss_dssp HHHHHHHHHTCST--TCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC------
T ss_pred HHHHHHHHHCCCC--CCCCHHHHHHHHHH--CCCCHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCCCC------
T ss_conf 9999999852889--97869999999987--1499999999841815899685739999999998420478899------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999988619999975139999999981
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 79 ~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 79 DAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
T ss_conf 999999999978997696919999999984
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.53 E-value=8.9e-14 Score=105.20 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=99.2
Q ss_pred CCCCHHHHHHHHHCCC--CCCCCCHHHHCCCC--------CCCCCHHH-HHHHHHHHHHH-CCCCCCCCCHHHHHHHHHH
Q ss_conf 9100999999998062--89851331004621--------68899999-99999999953-9999883319999999999
Q 002711 141 GTEGWGEVEKRFDELA--VDGMLPKSSFGQCI--------GMNESKDF-ASELFDALARR-RGLTSSSITKSELRGFWEQ 208 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~l--------g~~~~~~~-~~~lf~~l~~~-d~~~~G~Id~~EF~~~~~~ 208 (889)
+...++++++.|+.+| +||.|+.+||..++ +...++.. ...+.....+. +....+.+++.+|+.++..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999999768989808599999999999998840694399999999886100236654455568999999999
Q ss_pred HCCC-----------CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4068-----------96999999998856899934629999999996420162013688799999999886199999751
Q 002711 209 ITDQ-----------SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI 277 (889)
Q Consensus 209 ~~~~-----------~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I 277 (889)
+... ...+.++.+|+.+|+|+||+|+.+||++++.... ..++ ++.++.+|+.+|.|+||.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~------~~~~~~lf~~~D~d~dG~I 158 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAG--IIQS------SEDCEETFRVCDIDESGQL 158 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT--SCCS------HHHHHHHHHHSCCCTTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--CCCC------HHHHHHHHHHHCCCCCCCE
T ss_conf 9988887653203788999999999997637990531277899999818--9763------8999999998578999979
Q ss_pred CHHHHHHHHHH
Q ss_conf 39999999981
Q 002711 278 ELYNLEMLLLQ 288 (889)
Q Consensus 278 s~~EF~~~l~~ 288 (889)
+++||.+++..
T Consensus 159 s~~EF~~~~~~ 169 (187)
T d1uhka1 159 DVDEMTRQHLG 169 (187)
T ss_dssp EHHHHHHHHHH
T ss_pred EHHHHHHHHHH
T ss_conf 49999999998
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.53 E-value=1.7e-14 Score=109.91 Aligned_cols=139 Identities=15% Similarity=0.156 Sum_probs=98.6
Q ss_pred CCCCCHHHHHHHHHC-CC--CCCCCCHHHHCCCCC-------CCCCHHHHHHH-------HH-HHHHHCCCCCCCCCHHH
Q ss_conf 691009999999980-62--898513310046216-------88999999999-------99-99953999988331999
Q 002711 140 VGTEGWGEVEKRFDE-LA--VDGMLPKSSFGQCIG-------MNESKDFASEL-------FD-ALARRRGLTSSSITKSE 201 (889)
Q Consensus 140 ~~~~~~~~l~~~F~~-ld--~dG~Is~~ef~~~lg-------~~~~~~~~~~l-------f~-~l~~~d~~~~G~Id~~E 201 (889)
+++....++++.|+. +| +||.|+.+||..++. .........++ .+ .....+.+++|.|+++|
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH
T ss_conf 59899999999999861679979687999999999716445777661789999998999999999984768997575307
Q ss_pred HHHHHHHHCC---------CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999406---------8969999999988568999346299999999964201620136887999999998861999
Q 002711 202 LRGFWEQITD---------QSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH 272 (889)
Q Consensus 202 F~~~~~~~~~---------~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d 272 (889)
|..++..... ......+..+|+.+|+|++|+|+.+||+.++.. .+++ ++.++.+|+.+|.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~----~~l~------~~~~~~~f~~~D~d 151 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN----FQLQ------CADVPAVYNVITDG 151 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS----SCCC------CSSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH----CCCC------HHHHHHHHHHCCCC
T ss_conf 6677777765444432115788999999999876689866789999999998----5999------89999999970779
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 9975139999999981
Q 002711 273 NLGYIELYNLEMLLLQ 288 (889)
Q Consensus 273 ~dG~Is~~EF~~~l~~ 288 (889)
+||.|+++||..++.+
T Consensus 152 ~dG~i~~~EF~~~~~~ 167 (185)
T d2sasa_ 152 GKVTFDLNRYKELYYR 167 (185)
T ss_dssp TTSCCSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 8897909999999999
|
| >d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Flavohemoglobin, C-terminal domain domain: Flavohemoglobin, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=2e-14 Score=109.46 Aligned_cols=131 Identities=15% Similarity=0.259 Sum_probs=88.3
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88999993755665999999999988631100024445798876899999862059999993888716579999999984
Q 002711 701 DVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAE 780 (889)
Q Consensus 701 ~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el~~ 780 (889)
..++|||||+||||++|++++++... ..++++++|++|+.+++ .|.+++.++.+
T Consensus 7 ~plv~IagGtGiaP~~s~l~~l~~~~-------------------------~~~~i~l~~~~r~~~d~-~~~~el~~~~~ 60 (143)
T d1gvha3 7 TPVTLISAGVGQTPMLAMLDTLAKAG-------------------------HTAQVNWFHAAENGDVH-AFADEVKELGQ 60 (143)
T ss_dssp CCEEEEEEGGGGHHHHHHHHHHHHHT-------------------------CCSCEEEEEEESCTTTC-CSHHHHHHHHH
T ss_pred CCEEEEECHHHHHHHHHHHHHHHHCC-------------------------CCCEEEEEEECCCHHHH-HHHHHHHHHHH
T ss_conf 97999981240999999999999819-------------------------97469998523887888-99999999987
Q ss_pred HCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 45998199999650445678724689998774310138876445883212047999889999998547999199999097
Q 002711 781 YDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGA 860 (889)
Q Consensus 781 ~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP 860 (889)
.. +.+.++.++++..++.+.. . ...+.++.+...+ ......+...||+|||
T Consensus 61 ~~--~~~~~~~~~~~~~~~~~~~--------------~---------~~~~~~~~~~~~l----~~~~~~~~~~~~iCGp 111 (143)
T d1gvha3 61 SL--PRFTAHTWYRQPSEADRAK--------------G---------QFDSEGLMDLSKL----EGAFSDPTMQFYLCGP 111 (143)
T ss_dssp TS--SSEEEEEEESSCCHHHHHH--------------T---------CCSEESSCCGGGS----SSCCCCTTCEEEEESC
T ss_pred HC--CCEEEEEEEECCCCCCCCC--------------C---------CEEEECCCCHHHH----HHCCCCCCCEEEEECC
T ss_conf 49--8628999871267434554--------------3---------0222020109999----7425656747998484
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 26899999999842017987099995079
Q 002711 861 PGLTGELRRLSQDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 861 ~~l~~~vr~~~~~~~~~~~~~~~fh~E~F 889 (889)
++|++++++.+.+.+.. +-.+|.|.|
T Consensus 112 ~~m~~~v~~~L~~~G~~---~~~i~~E~F 137 (143)
T d1gvha3 112 VGFMQFTAKQLVDLGVK---QENIHYECF 137 (143)
T ss_dssp HHHHHHHHHHHHHTTCC---GGGEEEECS
T ss_pred HHHHHHHHHHHHHCCCC---HHHEEEECC
T ss_conf 89999999999985999---999898646
|
| >d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Ferredoxin reductase (flavodoxin reductase) species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=4.5e-14 Score=107.14 Aligned_cols=140 Identities=14% Similarity=0.233 Sum_probs=83.3
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 89988999993755665999999999988631100024445798876899999862059999993888716579999999
Q 002711 698 KDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNE 777 (889)
Q Consensus 698 ~~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~e 777 (889)
.+.++++|||||+||||++|+|+++... ...++++++|++|+.+++ .|.+++.+
T Consensus 4 p~~k~lvlIa~GtGiaP~~s~l~~~~~~-------------------------~~~~~v~l~~g~r~~~d~-~~~~el~~ 57 (148)
T d1fdra2 4 PHCETLWMLATGTAIGPYLSILRLGKDL-------------------------DRFKNLVLVHAARYAADL-SYLPLMQE 57 (148)
T ss_dssp CCCSEEEEEEEGGGGHHHHHHHHHCCSC-------------------------TTCSEEEEEEEESSGGGC-TTHHHHHH
T ss_pred CCCCEEEEEECCEEHHHHHHHHHHHHHH-------------------------CCCCCEEEEEECCCHHHH-HHHHHHHH
T ss_conf 9998799997675799999999999983-------------------------799758999941867887-88887554
Q ss_pred HHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 98445998199999650445678724689998774310138876445883212047999889999998547999199999
Q 002711 778 VAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFY 857 (889)
Q Consensus 778 l~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~ 857 (889)
+.+... .....+.+.+........... .... -+. ..+.+.+...-..+...||+
T Consensus 58 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~--~~l~~~~~~~~~~~~~~vyi 111 (148)
T d1fdra2 58 LEKRYE-GKLRIQTVVSRETAAGSLTGR----------------------IPAL-IES--GELESTIGLPMNKETSHVML 111 (148)
T ss_dssp HHHHTT-TSEEEEEEESSSCCTTEEESC----------------------HHHH-HHT--SHHHHHHTSCCCTTTEEEEE
T ss_pred HHHHCC-CCCCCCCCCCCCCCCCCCCCC----------------------CCCH-HHH--HHHHHHHCCCCCCCCCEEEE
T ss_conf 787666-331101124576333533220----------------------1004-788--99998650334655506999
Q ss_pred ECCHHHHHHHHHHHHHHH-C-C--CCCCEEEEEECC
Q ss_conf 097268999999998420-1-7--987099995079
Q 002711 858 CGAPGLTGELRRLSQDFS-R-K--TTTKFDFHKENF 889 (889)
Q Consensus 858 CGP~~l~~~vr~~~~~~~-~-~--~~~~~~fh~E~F 889 (889)
||||+|++++++.+.+.. - + ....-.+|.|.|
T Consensus 112 CGp~~m~~~v~~~L~e~~g~~e~~~~~~g~i~~E~~ 147 (148)
T d1fdra2 112 CGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEHY 147 (148)
T ss_dssp EECHHHHHHHHHHHHHHHCCCBCBTTBCCSEEEEEC
T ss_pred ECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
T ss_conf 798899999999999816987667799980898737
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.52 E-value=1.1e-13 Score=104.65 Aligned_cols=134 Identities=16% Similarity=0.274 Sum_probs=95.7
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCC-------CCCCCHH-----HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 999999998062--89851331004621-------6889999-----999999999953999988331999999999940
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCI-------GMNESKD-----FASELFDALARRRGLTSSSITKSELRGFWEQIT 210 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~l-------g~~~~~~-----~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~ 210 (889)
.+++++.|+.+| +||.|+.+||..++ +...... .....+... ..+.++++.|+++||+..+....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~ef~~~~~~~~ 83 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF-LTAVAGGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHT-GGGTTTTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999998669889680999999999971125621677777677654201110-20368998475999999998641
Q ss_pred CCC-----HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 689-----699999999885689993462999999999642016201368879999999988619999975139999999
Q 002711 211 DQS-----FDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEML 285 (889)
Q Consensus 211 ~~~-----~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~ 285 (889)
... ..+.++.+|+.+|+|+||.|+.+||+.++... +++ ++.+..+|+.+|.|+||.|+++||..+
T Consensus 84 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~----~~~------~~~~~~~f~~~D~d~dG~Is~~Ef~~~ 153 (174)
T d2scpa_ 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML----GLD------KTMAPASFDAIDTNNDGLLSLEEFVIA 153 (174)
T ss_dssp SCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT----TCC------GGGHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH----HHH------HHHHHHHHHHCCCCCCCCEEHHHHHHH
T ss_conf 1012677789999999998777765568799999999997----531------688988886017898996939999999
Q ss_pred HHHC
Q ss_conf 9819
Q 002711 286 LLQA 289 (889)
Q Consensus 286 l~~~ 289 (889)
+...
T Consensus 154 ~~~f 157 (174)
T d2scpa_ 154 GSDF 157 (174)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998
|
| >d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Ferredoxin reductase (flavodoxin reductase) species: Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]
Probab=99.47 E-value=8.8e-13 Score=98.67 Aligned_cols=134 Identities=7% Similarity=0.124 Sum_probs=82.0
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 98899999375566599999999998863110002444579887689999986205999999388871657999999998
Q 002711 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVA 779 (889)
Q Consensus 700 y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el~ 779 (889)
..++||||||+|||||+|+|++++.+...... .......++.++|++|+..++ .|.+++.++.
T Consensus 6 ~~~~llIagGtGIaP~~s~l~~~~~~~~~~~~----------------~~~~~~~~~~L~~g~r~~~d~-~~~~e~~~~~ 68 (162)
T d2bmwa2 6 EANVIMLAGGTGITPMRTYLWRMFKDAERAAN----------------PEYQFKGFSWLVFGVPTTPNI-LYKEELEEIQ 68 (162)
T ss_dssp TCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHC----------------TTCCCCSCEEEEEEESSGGGC-TTHHHHHHHH
T ss_pred CCCEEEEECCEEHHHHHHHHHHHHHCCCCCCC----------------CCCCCCCCEEEEEECCCHHHH-HHHHHHHHHH
T ss_conf 99989997600199999999999972500124----------------344767878999945733578-8789999999
Q ss_pred HHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 44599819999965044567872468999877431013887644588321204799988999999854799919999909
Q 002711 780 EYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCG 859 (889)
Q Consensus 780 ~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CG 859 (889)
.... ....++...+...+..... ........+.+...+ .......+..||+||
T Consensus 69 ~~~~-~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~----~~~~~~~~~~vyvCG 121 (162)
T d2bmwa2 69 QKYP-DNFRLTYAISREQKNPQGG----------------------RMYIQDRVAEHADQL----WQLIKNQKTHTYICG 121 (162)
T ss_dssp HHCT-TTEEEEEEETTTCBCTTSS----------------------BCCHHHHHHHTHHHH----HHHHTSTTEEEEEEE
T ss_pred HHCC-CCEEEEEEEECCCCCCCCC----------------------CCHHHHHHHHHHHHH----HHHCCCCCCEEEEEC
T ss_conf 7347-7269999860365445677----------------------410255689889987----530024797899989
Q ss_pred CHHHHHHHHHHHHHHHCC
Q ss_conf 726899999999842017
Q 002711 860 APGLTGELRRLSQDFSRK 877 (889)
Q Consensus 860 P~~l~~~vr~~~~~~~~~ 877 (889)
||+|++++++.+.+.+.+
T Consensus 122 p~~m~~~v~~~L~~~g~~ 139 (162)
T d2bmwa2 122 PPPMEEGIDAALSAAAAK 139 (162)
T ss_dssp CTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 889999999999986151
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.46 E-value=4.4e-13 Score=100.65 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=76.2
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH-CCCCHHHHHHH
Q ss_conf 99999999539999883319999999999406896999999998856899934629999999996420-16201368879
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSAS-ANKLSKIQERV 258 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~-~~~l~~~~e~~ 258 (889)
.++-.++...+. +|.|+|+||+..+... ...++.++.+|++||+|+||+|+.+||+.++..... +..++
T Consensus 9 ~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~------ 78 (109)
T d1rwya_ 9 EDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS------ 78 (109)
T ss_dssp HHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC------
T ss_pred HHHHHHHHHCCC--CCCCCHHHHHHHHCCC--CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC------
T ss_conf 999999983066--8986799999998156--489999999852425799981839999999998132344488------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999988619999975139999999981
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.++.+|+++|.|+||.|+|+||.++|.+
T Consensus 79 ~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 79 AKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 899999999829999985749999999985
|
| >d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: NAD(P)H:flavin oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.45 E-value=3.1e-13 Score=101.66 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=81.2
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
....+||||||+||||++|++++++... ..++++|+|++|+.+++ .|.+.+.++
T Consensus 4 ~~rplv~IagGtGiaP~~s~l~~~~~~~-------------------------~~~~v~l~~~~r~~~~~-~~~~~l~~l 57 (135)
T d1qfja2 4 EERPMILIAGGTGFSYARSILLTALARN-------------------------PNRDITIYWGGREEQHL-YDLCELEAL 57 (135)
T ss_dssp SSSCEEEEEETTCHHHHHHHHHHHHHHC-------------------------TTCCEEEEEEESSGGGC-TTHHHHHHH
T ss_pred CCCCEEEEECCEEHHHHHHHHHHHHHCC-------------------------CCCCEEEEEECCCHHHH-HHHHHHHHH
T ss_conf 9998999988625999999999999706-------------------------45653689711667678-899999999
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
..... .+..+...+... ++ ...+.||.. +.+.+.. .......||+|
T Consensus 58 ~~~~~--~~~~~~~~~~~~-~~---------------------------~~~~~g~~~-~~~~~~~---~~~~~~~~yvC 103 (135)
T d1qfja2 58 SLKHP--GLQVVPVVEQPE-AG---------------------------WRGRTGTVL-TAVLQDH---GTLAEHDIYIA 103 (135)
T ss_dssp HHHCT--TEEEEEEESSCC-TT---------------------------CCSEESCHH-HHHHHHC---SCCTTCEEEEE
T ss_pred HHHCC--CCCEEEEECCCC-CC---------------------------CCCCCCCHH-HHHHHHC---CCCCCCCEEEE
T ss_conf 88457--651033302357-65---------------------------322347159-9999865---57434715741
Q ss_pred CCHHHHHHHHHHH-HHHHCCCCCCEEEEEECC
Q ss_conf 9726899999999-842017987099995079
Q 002711 859 GAPGLTGELRRLS-QDFSRKTTTKFDFHKENF 889 (889)
Q Consensus 859 GP~~l~~~vr~~~-~~~~~~~~~~~~fh~E~F 889 (889)
|||+|++.+.+.+ .+.+. ..-.+|.|.|
T Consensus 104 Gp~~m~~~~~~~L~~~~G~---~~~~i~~E~F 132 (135)
T d1qfja2 104 GRFEMAKIARDLFCSERNA---REDRLFGDAF 132 (135)
T ss_dssp SCHHHHHHHHHHHHHHSCC---CGGGEECTHH
T ss_pred CCHHHHHHHHHHHHHHCCC---CHHHEEEEEE
T ss_conf 8899999999999997599---9999887722
|
| >d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Nitrate reductase species: Corn (Zea mays) [TaxId: 4577]
Probab=99.45 E-value=6.2e-13 Score=99.68 Aligned_cols=127 Identities=13% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
..+.++|||||+||||++|++++++..... ..++++++|++|+.+.+ .+.+.+.++
T Consensus 11 ~~k~lv~IAgGtGIaP~~s~l~~~~~~~~~-----------------------~~~~v~l~~g~r~~~~~-~~~~~~~~~ 66 (146)
T d2cnda2 11 NARRLAMICGGSGITPMYQIIQAVLRDQPE-----------------------DHTEMHLVYANRTEDDI-LLRDELDRW 66 (146)
T ss_dssp CCSEEEEEEEGGGHHHHHHHHHHHHHTTTT-----------------------CCCEEEEEEEESCGGGC-TTHHHHHHH
T ss_pred CCCEEEEEECEEEHHHHHHHHHHHHHHCCC-----------------------CCCEEEEEEEECCCCCC-HHHHHHHHH
T ss_conf 788799996628874999999999984776-----------------------67618999931235541-047877557
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
..... .....+.+...... .+ . ....+.||.+...+ ...... ......||+|
T Consensus 67 ~~~~~-~~~~~~~~~~~~~~-~~----------------------~--~~~~~~g~~~~~~l-~~~~~~-~~~~~~vyiC 118 (146)
T d2cnda2 67 AAEYP-DRLKVWYVIDQVKR-PE----------------------E--GWKYSVGFVTEAVL-REHVPE-GGDDTLALAC 118 (146)
T ss_dssp HHHCT-TTEEEEEEESCCSC-GG----------------------G--CCCSEESSCCHHHH-HHHSCC-CSSSEEEEEE
T ss_pred HHHCC-CCEEEEEEECCCCC-CC----------------------C--CCCCCCCCCCHHHH-HHHCCC-CCCCCEEEEE
T ss_conf 87578-85267875024467-64----------------------4--56664573116779-874455-7789699998
Q ss_pred CCHHHHHH-HHHHHHHHHCC
Q ss_conf 97268999-99999842017
Q 002711 859 GAPGLTGE-LRRLSQDFSRK 877 (889)
Q Consensus 859 GP~~l~~~-vr~~~~~~~~~ 877 (889)
||++|++. ++..+.+.+..
T Consensus 119 Gp~~m~~~av~~~L~~~G~~ 138 (146)
T d2cnda2 119 GPPPMIQFAISPNLEKMKYD 138 (146)
T ss_dssp CCHHHHHTTTHHHHHTTTCC
T ss_pred CCHHHHHHHHHHHHHHCCCC
T ss_conf 99899999999999985999
|
| >d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: NAD(P)H:flavin oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=2.7e-13 Score=101.98 Aligned_cols=91 Identities=20% Similarity=0.418 Sum_probs=79.9
Q ss_pred CCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCC-CCCEEEEEEEC--CCCHHHHHHH
Q ss_conf 01799999995599999999658997437863899997677997422606310699-99169999855--8512789999
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDWTSQLKSI 652 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~L~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~-~~~lsl~Ir~~--G~wT~~L~~~ 652 (889)
.+++|.+++.+++++.+++++.|.++.|+||||+.|.+|.. ++|||||+|+|. +++++++||.. |.+|+.|.+.
T Consensus 3 l~~~V~~i~~lt~~v~~~~l~~~~~~~f~~GQ~v~l~~~~~---~~r~ySias~p~~~~~l~l~ir~~~~g~~s~~l~~~ 79 (97)
T d1qfja1 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER---DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDR 79 (97)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSSS---CEEEEECCSCTTSTTCEEEEEC------CCHHHHHH
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCC---CCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHC
T ss_conf 87999999986899799987088667428997879998178---827998877378876799998672578336757633
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 863069999887663000025689999855799959779998
Q 002711 653 FAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 653 ~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
+. +|+ .|.|+||||...
T Consensus 80 l~-------------------~G~------~v~v~gP~G~~~ 96 (97)
T d1qfja1 80 IL-------------------KDH------QIVVDIPHGEAW 96 (97)
T ss_dssp HH-------------------HHS------EEEEEEEECSCC
T ss_pred CC-------------------CCC------EEEEECCCCCEE
T ss_conf 79-------------------999------999911077568
|
| >d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Azotobacter vinelandii [TaxId: 354]
Probab=99.41 E-value=4.2e-13 Score=100.78 Aligned_cols=91 Identities=19% Similarity=0.408 Sum_probs=78.1
Q ss_pred CEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEC--CCCHHHHHHHHH
Q ss_conf 179999999559999999965899743786389999767799742260631069999169999855--851278999986
Q 002711 577 SVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKSIFA 654 (889)
Q Consensus 577 ~~~i~~v~~~~~~v~~L~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~~~~lsl~Ir~~--G~wT~~L~~~~~ 654 (889)
.-+|+++....+++..+++..|.+++|+||||+.|.+|......+|||||+|+|.++.+.++|+.. |.+|+.|.+
T Consensus 5 ~~kV~~v~~~t~~~~~~~l~~~~~~~f~aGQ~~~l~~~~~g~~~~R~ySi~S~p~~~~~~~~i~~~~~G~~S~~L~~--- 81 (99)
T d1a8pa1 5 VERVLSVHHWNDTLFSFKTTRNPSLRFENGQFVMIGLEVDGRPLMRAYSIASPNYEEHLEFFSIKVQNGPLTSRLQH--- 81 (99)
T ss_dssp EEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSEEEEEEECCSSCSSHHHHTT---
T ss_pred EEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHH---
T ss_conf 69999999459988999966898771379868999616889636865121489999958999999579976688874---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE-ECCCCCC
Q ss_conf 30699998876630000256899998557999-5977999
Q 002711 655 KVCQPPSVDQSGLLRADIGQADNRPRIPKLLI-DGPYGAP 693 (889)
Q Consensus 655 ~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~I-dGPyG~~ 693 (889)
+++|+ ++.| +||||..
T Consensus 82 -----------------l~~Gd------~v~v~~gP~G~l 98 (99)
T d1a8pa1 82 -----------------LKEGD------ELMVSRKPTGTL 98 (99)
T ss_dssp -----------------CCTTC------EEEEESCCBCSC
T ss_pred -----------------CCCCC------EEEECCCCCEEE
T ss_conf -----------------89999------999887995008
|
| >d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Ferredoxin reductase (flavodoxin reductase) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=99.39 E-value=1.2e-12 Score=97.89 Aligned_cols=131 Identities=10% Similarity=0.204 Sum_probs=80.4
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
...++||||||+||||++|+|++++...... ....+++.|++++|+..++ .|.+++.++
T Consensus 7 ~~~plilIa~GtGIaP~~s~l~~~~~~~~~~--------------------~~~~~~i~l~~g~r~~~d~-~y~~e~~~~ 65 (160)
T d1fnda2 7 PNATIIMLGTGTGIAPFRSFLWKMFFEKHDD--------------------YKFNGLAWLFLGVPTSSSL-LYKEEFEKM 65 (160)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHHHSCCBTT--------------------BCCCSEEEEEEEESSGGGC-TTHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHCCC--------------------CCCCCEEEEEEECCCHHHH-HHHHHHHHH
T ss_conf 9999899977504899999999999831334--------------------6688639999622737778-999999999
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
.+... ....++...+......... +..+. ....-+...+...+ ......||+|
T Consensus 66 ~~~~~-~~~~~~~~~s~~~~~~~~~---------------------~~~~~-~~~~~~~~~~~~~~----~~~~~~vyiC 118 (160)
T d1fnda2 66 KEKAP-DNFRLDFAVSREQTNEKGE---------------------KMYIQ-TRMAQYAVELWEML----KKDNTYVYMC 118 (160)
T ss_dssp HHHCT-TTEEEEEEETTTCBCTTCC---------------------BCCHH-HHHHTTHHHHHHHH----TSTTEEEEEE
T ss_pred HHHCC-CCEEEEEEECCCHHCCCCC---------------------CCEEH-HHHHHHHHHHHHHH----CCCCCEEEEE
T ss_conf 98367-7536999971302035788---------------------62002-06888877777753----1578889995
Q ss_pred CCHHHHHHHHHHHHHHHCC
Q ss_conf 9726899999999842017
Q 002711 859 GAPGLTGELRRLSQDFSRK 877 (889)
Q Consensus 859 GP~~l~~~vr~~~~~~~~~ 877 (889)
||++|++++++.+.+....
T Consensus 119 Gp~~m~~~v~~~l~~~~~~ 137 (160)
T d1fnda2 119 GLKGMEKGIDDIMVSLAAA 137 (160)
T ss_dssp ECHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHH
T ss_conf 8888999999999999886
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.38 E-value=1.3e-12 Score=97.62 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH-CCCCHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996420-16201368
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSAS-ANKLSKIQ 255 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~-~~~l~~~~ 255 (889)
..+..++. ..+.+ |.|+|.||+.++. +. ....++++.+|++||+|++|+|+.+||+.+++.... ...++
T Consensus 8 ~di~~~~~---~~~~~--gsi~~~eF~~~~~-l~-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~--- 77 (107)
T d2pvba_ 8 ADVAAALA---ACSAA--DSFKHKEFFAKVG-LA-SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT--- 77 (107)
T ss_dssp HHHHHHHH---HTCST--TCCCHHHHHHHHT-GG-GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC---
T ss_pred HHHHHHHH---HCCCC--CCCCHHHHHHHHH-CC-CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC---
T ss_conf 99999997---15678--9837999999984-26-599999999987664699995849999999998401244599---
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 87999999998861999997513999999998
Q 002711 256 ERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 256 e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
++.++.+|+++|.|+||.|+|+||+.+|+
T Consensus 78 ---~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 78 ---DAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp ---HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHCCCCCCCEEHHHHHHHHC
T ss_conf ---99999999981899999595999999972
|
| >d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Aromatic dioxygenase reductase-like domain: Phthalate dioxygenase reductase species: Pseudomonas cepacia, db01 [TaxId: 292]
Probab=99.37 E-value=5.8e-12 Score=93.28 Aligned_cols=107 Identities=20% Similarity=0.360 Sum_probs=71.4
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
..+.+||||||+||||++|+++++..+ ..+++.++|++|+..++ ++.+++.++
T Consensus 7 ~~~~~v~IagGtGiaP~~s~~~~l~~~--------------------------~~~~~~l~~~~r~~~~~-~~~~~l~~~ 59 (120)
T d2piaa2 7 RAKSFILVAGGIGITPMLSMARQLRAE--------------------------GLRSFRLYYLTRDPEGT-AFFDELTSD 59 (120)
T ss_dssp TCSEEEEEEEGGGHHHHHHHHHHHHHH--------------------------CSSEEEEEEEESCGGGC-TTHHHHHST
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHH--------------------------CCCCEEEEEEECCHHHH-HHHHHHHHH
T ss_conf 888789998360678899999999984--------------------------69984999961778886-536999987
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
+. ...+..+. +...+ .++-++.... ...+ ....||+|
T Consensus 60 ~~---~~~~~~~~--~~~~~---------------------------------~~~~~~~~~~----~~~~-~~~~~y~C 96 (120)
T d2piaa2 60 EW---RSDVKIHH--DHGDP---------------------------------TKAFDFWSVF----EKSK-PAQHVYCC 96 (120)
T ss_dssp TT---TTTEEEEE--CTTCT---------------------------------TSCCCHHHHH----SSCC-TTEEEEEE
T ss_pred HH---CCCEEEEE--ECCCC---------------------------------CCCCCHHHHH----CCCC-CCCEEEEE
T ss_conf 50---79769966--04787---------------------------------6653178773----4588-76789996
Q ss_pred CCHHHHHHHHHHHHHHH
Q ss_conf 97268999999998420
Q 002711 859 GAPGLTGELRRLSQDFS 875 (889)
Q Consensus 859 GP~~l~~~vr~~~~~~~ 875 (889)
||++|++.++++++.+.
T Consensus 97 Gp~~mi~~v~~~~~~~~ 113 (120)
T d2piaa2 97 GPQALMDTVRDMTGHWP 113 (120)
T ss_dssp SCHHHHHHHHHHTTTSC
T ss_pred CCHHHHHHHHHHHCCCC
T ss_conf 97999999999981898
|
| >d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: NADPH-cytochrome p450 reductase-like domain: Neuronal nitric-oxide synthase FAD/NADP+ domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.37 E-value=9.3e-12 Score=91.93 Aligned_cols=128 Identities=12% Similarity=0.121 Sum_probs=75.2
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
....+||||+|+|||||+|+|+++........ ....++.++|.+|...+...|.+++.+.
T Consensus 8 ~~~plvlIa~GtGIaP~~s~L~~~~~~~~~~~--------------------~~~~~~~l~~~~~~~~~~~~~~~e~~~~ 67 (165)
T d1f20a2 8 PQVPCILVGPGTGIAPFRSFWQQRQFDIQHKG--------------------MNPCPMVLVFGCRQSKIDHIYREETLQA 67 (165)
T ss_dssp TTSCEEEECCGGGGHHHHHHHHHHHHHHHHHC--------------------CCCCCEEEEEEESCTTTSCTTHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC--------------------CCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99989999825409999999999999777527--------------------8889769999415507888877899999
Q ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 84459981999996504456787246899987743101388764458832120479998899999985479991999990
Q 002711 779 AEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYC 858 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~C 858 (889)
.... ..+.++...++..+...... .+..+.+..+.+..... .....+|+|
T Consensus 68 ~~~~--~~~~~~~~~sr~~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~---~~~~~~yiC 117 (165)
T d1f20a2 68 KNKG--VFRELYTAYSREPDRPKKYV-------------------------QDVLQEQLAESVYRALK---EQGGHIYVC 117 (165)
T ss_dssp HHTT--SEEEEEEEESSCTTSCCCCH-------------------------HHHHHHHSHHHHHHHHH---TSCCEEEEE
T ss_pred HHCC--CCEEEEEEEECCCCCCCCCC-------------------------CCHHHHHHHHHHHHHCC---CCCCEEEEE
T ss_conf 8669--92599999825553787752-------------------------21178889999985236---799589997
Q ss_pred CCHHHHHHHHHHHHHHHC
Q ss_conf 972689999999984201
Q 002711 859 GAPGLTGELRRLSQDFSR 876 (889)
Q Consensus 859 GP~~l~~~vr~~~~~~~~ 876 (889)
||++|++++++...+...
T Consensus 118 Gp~~M~~~v~~~L~~i~~ 135 (165)
T d1f20a2 118 GDVTMAADVLKAIQRIMT 135 (165)
T ss_dssp ECHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
T ss_conf 883048999999999999
|
| >d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Ferredoxin reductase (flavodoxin reductase) species: Azotobacter vinelandii [TaxId: 354]
Probab=99.36 E-value=3.3e-12 Score=94.87 Aligned_cols=133 Identities=15% Similarity=0.187 Sum_probs=78.9
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
..+++||||||+||||++||+++++... ..++++++|++|+..++. +.+.+.++
T Consensus 6 p~~~lvlIagGtGIaP~~sil~~~~~~~-------------------------~~~~~~l~~g~r~~~~~~-~~~el~~~ 59 (158)
T d1a8pa2 6 PGKHLYMLSTGTGLAPFMSLIQDPEVYE-------------------------RFEKVVLIHGVRQVNELA-YQQFITEH 59 (158)
T ss_dssp CCSEEEEEEEGGGGHHHHHHTTCHHHHH-------------------------HCSEEEEEEEESSGGGCT-THHHHHTT
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHHHC-------------------------CCCCEEEEECCCCHHHHH-HHHHHHHH
T ss_conf 9997999985552999999999999809-------------------------988346653134178876-67777777
Q ss_pred HHHCCCC------CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHC
Q ss_conf 8445998------19999965044567872468999877431013887644588321204799988----9999998547
Q 002711 779 AEYDQDG------VIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWR----TVFKHVAVKH 848 (889)
Q Consensus 779 ~~~~~~~------~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~----~v~~~~~~~~ 848 (889)
....... .+.+....+....... |+.... .+.+.+...+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~ 108 (158)
T d1a8pa2 60 LPQSEYFGEAVKEKLIYYPTVTRESFHNQ-------------------------------GRLTDLMRSGKLFEDIGLPP 108 (158)
T ss_dssp GGGCTTTHHHHHHHEEEEEEESSSCCSSB-------------------------------SCHHHHHHSSHHHHHHTCCC
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCC-------------------------------CCCCCHHCCCHHHHHHHCCC
T ss_conf 76533310022451699873143333566-------------------------------64440000213345543033
Q ss_pred -CCCEEEEEEECCHHHHHHHHHHHHHHHCC----CCCCEEEEEEC
Q ss_conf -99919999909726899999999842017----98709999507
Q 002711 849 -TDERVGVFYCGAPGLTGELRRLSQDFSRK----TTTKFDFHKEN 888 (889)
Q Consensus 849 -~~~~v~V~~CGP~~l~~~vr~~~~~~~~~----~~~~~~fh~E~ 888 (889)
......||+||||+|++++++.+.+.+.+ .....+|+-|.
T Consensus 109 ~~~~~~~~yiCGp~~m~~~v~~~L~~~G~~~~~~~~e~~~~v~e~ 153 (158)
T d1a8pa2 109 INPQDDRAMICGSPSMLDESCEVLDGFGLKISPRMGEPGDYLIER 153 (158)
T ss_dssp CCTTTEEEEEEECHHHHHHHHHHHHHTTCCBCSSTTSCBSEEEEE
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
T ss_conf 575555289979789999999999980998557768886389997
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=3.1e-12 Score=95.07 Aligned_cols=98 Identities=14% Similarity=0.233 Sum_probs=74.0
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH-HCCCCHHHHHHH
Q ss_conf 9999999953999988331999999999940689699999999885689993462999999999642-016201368879
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSA-SANKLSKIQERV 258 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~-~~~~l~~~~e~~ 258 (889)
.++-.++...+.+ |.|+++||...+. + .....+.++.+|++||+|++|+|+.+||+.++.... .+..++
T Consensus 9 ~dI~~~l~~~~~~--~s~~~~~F~~~~~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~------ 78 (108)
T d1rroa_ 9 EDIAAALQECQDP--DTFEPQKFFQTSG-L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT------ 78 (108)
T ss_dssp HHHHHHHHHTCST--TCCCHHHHHHHHS-G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC------
T ss_pred HHHHHHHHHCCCC--CCCCHHHHHHHHC-C-CCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCCCCC------
T ss_conf 9999999853668--9806999999982-6-7699999999986255799983839999999999775467898------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999998861999997513999999998
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
++.+..+|+++|.|+||.|+++||..+|+
T Consensus 79 ~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 79 ESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHC
T ss_conf 99999999985899998573999999973
|
| >d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Dihydroorotate dehydrogenase B, PyrK subunit domain: Dihydroorotate dehydrogenase B, PyrK subunit species: Lactococcus lactis, isozyme B [TaxId: 1358]
Probab=99.32 E-value=6e-12 Score=93.18 Aligned_cols=109 Identities=16% Similarity=0.239 Sum_probs=70.6
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 98899889999937556659999999999886311000244457988768999998620599999938887165799999
Q 002711 696 DYKDYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVM 775 (889)
Q Consensus 696 ~~~~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l 775 (889)
.....++++||||||||||++|+++++.++ ..+++++++.|+.+++ .|.+++
T Consensus 4 ~~~~~~kvllIAgG~GitPl~sm~~~l~~~---------------------------~~~v~l~~g~r~~~~~-~~~~el 55 (160)
T d1ep3b2 4 EVTSTDKILIIGGGIGVPPLYELAKQLEKT---------------------------GCQMTILLGFASENVK-ILENEF 55 (160)
T ss_dssp TCCTTSEEEEEEEGGGSHHHHHHHHHHHHH---------------------------TCEEEEEEEESSGGGC-CCHHHH
T ss_pred CCCCCCEEEEEEEEEEHHHHHHHHHHHHHC---------------------------CCCEEEEEECCCHHHH-HHHHHH
T ss_conf 347899799997104499999999999864---------------------------5855899963898998-899999
Q ss_pred HHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 99984459981999996504456787246899987743101388764458832120479998899999985479991999
Q 002711 776 NEVAEYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGV 855 (889)
Q Consensus 776 ~el~~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V 855 (889)
.++.. ..++.+ +.. ++. ...|+ ...+. .........|
T Consensus 56 ~~~~~------~~~~~~-~~~---~~~---------------------------~~~g~--v~~~~----~~~~~~~~~v 92 (160)
T d1ep3b2 56 SNLKN------VTLKIA-TDD---GSY---------------------------GTKGH--VGMLM----NEIDFEVDAL 92 (160)
T ss_dssp HTSTT------EEEEEE-ETT---CSS---------------------------SEESC--HHHHH----HHCCSCCSEE
T ss_pred HHHHC------CCCCCC-CCC---CCC---------------------------CCCCC--HHHHH----HHHCCCCCEE
T ss_conf 98637------776654-567---631---------------------------02661--89999----8642234401
Q ss_pred EEECCHHHHHHHHHHHHHHH
Q ss_conf 99097268999999998420
Q 002711 856 FYCGAPGLTGELRRLSQDFS 875 (889)
Q Consensus 856 ~~CGP~~l~~~vr~~~~~~~ 875 (889)
|+|||+.|++.+.+.+++.+
T Consensus 93 y~CGP~~m~~~v~~~~~~~g 112 (160)
T d1ep3b2 93 YTCGAPAMLKAVAKKYDQLE 112 (160)
T ss_dssp EEESCHHHHHHHHHHTTTCS
T ss_pred EEECCCHHHHHHHHHHHHCC
T ss_conf 56156218999999998649
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=6e-11 Score=86.60 Aligned_cols=122 Identities=14% Similarity=0.049 Sum_probs=93.9
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999998062--898513310046216889999999999999953999988331999999999940689699999999
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F 222 (889)
...+++.+..+| ++|.|+.+||..++.. .....++|..+ |. +++|+|+.+||..++..++....++.++.++
T Consensus 39 ~~~~~~li~~~D~~~~G~i~~~EF~~l~~~---~~~~~~~F~~f-D~--d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~ 112 (165)
T d1k94a_ 39 LETCRIMIAMLDRDHTGKMGFNAFKELWAA---LNAWKENFMTV-DQ--DGSGTVEHHELRQAIGLMGYRLSPQTLTTIV 112 (165)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHH---HHHHHHHHHHH-CT--TCCSBCCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHC---CCHHHHHHHHH-CC--CCCCEECHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 999999999857899972758999887621---20237899983-89--9998476999999999853129999999999
Q ss_pred HHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHH
Q ss_conf 8856899934629999999996420162013688799999999886199999751--39999999981
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLLLQ 288 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l~~ 288 (889)
+.||+ ||.|+.+||...+... +.+...|+..|+|++|+| +++||..++..
T Consensus 113 ~~~d~--~g~i~~~eFi~~~~~l--------------~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~~ 164 (165)
T d1k94a_ 113 KRYSK--NGRIFFDDYVACCVKL--------------RALTDFFRKRDHLQQGSANFIYDDFLQGTMA 164 (165)
T ss_dssp HHHCB--TTBCBHHHHHHHHHHH--------------HHHHHHHHTTCTTCCSEEEEEHHHHHHHHHT
T ss_pred HHCCC--CCCCCHHHHHHHHHHH--------------HHHHHHHHHHCCCCCCCEEECHHHHHHHHHC
T ss_conf 99399--9969599999999999--------------9999999985889998189519999999871
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.31 E-value=9.4e-11 Score=85.35 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=94.6
Q ss_pred HHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999998062--8985133100462168899999999999999539999883319999999999406896999999998
Q 002711 146 GEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFD 223 (889)
Q Consensus 146 ~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~ 223 (889)
..+...|..+| ++|.|+.+||...+... ......|..++ . +++|.|+.+||..++........++.++.+++
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~---~~~~~~f~~~D-~--~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~ 129 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKYI---TDWQNVFRTYD-R--DNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHHH---HHHHHHHHHHC-T--TCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHC---CCCCCCCCCCC-C--CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 999998512465533100246777653101---22211011122-2--44410246899988987087401578998999
Q ss_pred HHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHH
Q ss_conf 856899934629999999996420162013688799999999886199999751--399999999
Q 002711 224 MVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLL 286 (889)
Q Consensus 224 ~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l 286 (889)
.+|.+++|+|+.+||...+.. + +....+|+++|+|++|.| +++||..+|
T Consensus 130 ~~d~~~dg~Is~~eF~~~~~~------l--------~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 130 KFDRQGRGQIAFDDFIQGCIV------L--------QRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHCSSCSSCBCHHHHHHHHHH------H--------HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HHCCCCCCCCCHHHHHHHHHH------H--------HHHHHHHHHHCCCCCCCEEECHHHHHHHH
T ss_conf 817799995829999999999------9--------99999999858899997886499999974
|
| >d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: Reductases domain: Ferredoxin reductase (flavodoxin reductase) species: Maize (Zea mays), root isoform [TaxId: 4577]
Probab=99.30 E-value=3.3e-12 Score=94.89 Aligned_cols=128 Identities=6% Similarity=0.121 Sum_probs=73.5
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88999993755665999999999988631100024445798876899999862059999993888716579999999984
Q 002711 701 DVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVAE 780 (889)
Q Consensus 701 ~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el~~ 780 (889)
.++||||+|+||||++|+|++++.+.... ....+++.|+|++|+..++ .|.+++.++.+
T Consensus 4 ~plllIa~GtGIaP~~s~l~~~~~~~~~~--------------------~~~~~~i~l~~g~r~~~d~-~y~~e~~~~~~ 62 (154)
T d1jb9a2 4 ATHIMIATGTGVAPFRGYLRRMFMEDVPN--------------------YRFGGLAWLFLGVANSDSL-LYDEEFTSYLK 62 (154)
T ss_dssp CEEEEEEEGGGGHHHHHHHHHHHTEECTT--------------------CCCCSEEEEEEEESSGGGC-SSHHHHHHHHH
T ss_pred CCEEEEECCEEHHHHHHHHHHHHHHCCCC--------------------CCCCCEEEEEEEECCCCHH-HHHHHHHHHHH
T ss_conf 98999982334999999999999851311--------------------4677639999874265206-79999999998
Q ss_pred HCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 45998199999650445678724689998774310138876445883212047999889999998547999199999097
Q 002711 781 YDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCGA 860 (889)
Q Consensus 781 ~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CGP 860 (889)
... .........++........ .+ ...+..+-. ......... ....||+|||
T Consensus 63 ~~~-~~~~~~~~~~~~~~~~~~~--------------------~~--~~~~~~~~~-~~~~~~~~~----~~~~~yvCGp 114 (154)
T d1jb9a2 63 QYP-DNFRYDKALSREQKNRSGG--------------------KM--YVQDKIEEY-SDEIFKLLD----GGAHIYFCGL 114 (154)
T ss_dssp HCT-TTEEEEEEETTTCC----C--------------------CC--CHHHHHHHT-HHHHHHHHH----TTCEEEEEEC
T ss_pred HCC-CCEEEEEEECCCCCCCCCC--------------------CC--CCCHHHHHH-HHHHHHCCC----CCCEEEEECC
T ss_conf 489-9889999860477676776--------------------45--342278876-887540136----7988999787
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 26899999999842017
Q 002711 861 PGLTGELRRLSQDFSRK 877 (889)
Q Consensus 861 ~~l~~~vr~~~~~~~~~ 877 (889)
+.|++++++++.+...+
T Consensus 115 ~~mm~~v~~~L~~~~~~ 131 (154)
T d1jb9a2 115 KGMMPGIQDTLKKVAER 131 (154)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 87899999999999997
|
| >d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=1.3e-11 Score=91.05 Aligned_cols=93 Identities=15% Similarity=0.294 Sum_probs=79.5
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEC--CCCHHHHHH
Q ss_conf 120179999999559999999965899743786389999767799742260631069999169999855--851278999
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQGFKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLKS 651 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~L~~~~p~~~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~~~~lsl~Ir~~--G~wT~~L~~ 651 (889)
.|...+|++++.+.+++.++++..| .+.|+||||+.|.+|......+|||||+|+|.++.+.++||.. |..|+.|.+
T Consensus 2 ~w~~a~V~~v~~~t~~v~~l~~~~p-~~~f~pGQ~v~l~~~~~g~~~~R~YSi~s~p~~~~~~~~vk~~~~G~~S~~l~~ 80 (99)
T d1fdra1 2 DWVTGKVTKVQNWTDALFSLTVHAP-VLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAA 80 (99)
T ss_dssp CEEEEEEEEEEECSSSEEEEEEECC-CCCCCTTCEEEEEECC---CEEEEEECCSCTTCSSEEEEEECCTTCSSHHHHHT
T ss_pred CCEEEEEEEEEECCCCEEEEEECCC-CCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHH
T ss_conf 8678799999986899799998699-888899838883467789818788866789877403799999668177888965
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 986306999988766300002568999985579995977999
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~ 693 (889)
+++|+ ++.|.||.|+.
T Consensus 81 --------------------lk~GD------~v~v~gP~~g~ 96 (99)
T d1fdra1 81 --------------------LKPGD------EVQVVSEAAGF 96 (99)
T ss_dssp --------------------CCTTC------EEEEESSCBCC
T ss_pred --------------------CCCCC------EEEECCCCCCE
T ss_conf --------------------99999------99987588998
|
| >d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Methane monooxygenase component C, MmoC species: Methylococcus capsulatus [TaxId: 414]
Probab=99.25 E-value=5.9e-12 Score=93.22 Aligned_cols=90 Identities=20% Similarity=0.373 Sum_probs=76.3
Q ss_pred CCCEEEEEEEEECCCEEEEEEECCC------CCCCCCCCEEEEEECCCCCCCCCCEEEEECCC-CCCEEEEEEEC--CCC
Q ss_conf 2017999999955999999996589------97437863899997677997422606310699-99169999855--851
Q 002711 575 YKSVRILKVAVYPGNVLALQMSKPQ------GFKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTL--GDW 645 (889)
Q Consensus 575 ~~~~~i~~v~~~~~~v~~L~~~~p~------~~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~-~~~lsl~Ir~~--G~w 645 (889)
.+.++|++++.+++++.+|++..|. .+.|+||||+.|.+|+.. ++|||||+|+|. ++.+.++||.. |.+
T Consensus 10 ~~~a~V~~~~~lt~di~~l~l~~p~~~~~~~~~~f~pGQ~v~l~~~g~~--~~R~ySias~p~~~~~~~~~i~~~~~G~~ 87 (109)
T d1tvca1 10 SFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGTD--VSRSYSPANLPNPEGRLEFLIRVLPEGRF 87 (109)
T ss_dssp EEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSCS--SSEEECCBCCSSSSCCEEEEECCCTTSSS
T ss_pred EEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC--CCCCCEECCCCCCCCEEEEEEEEECCCHH
T ss_conf 5999999999968996999998888535566565889838999988804--31211642687678506999998579468
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 2789999863069999887663000025689999855799959779
Q 002711 646 TSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYG 691 (889)
Q Consensus 646 T~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG 691 (889)
|+.|.+.+ ++|+ ++.+.||||
T Consensus 88 S~~l~~~l-------------------~~Gd------~v~i~gP~G 108 (109)
T d1tvca1 88 SDYLRNDA-------------------RVGQ------VLSVKGPLG 108 (109)
T ss_dssp HHHHHHHS-------------------SSSS------EEEEEEEEC
T ss_pred HHHHHHHC-------------------CCCC------EEEEECCCC
T ss_conf 99999638-------------------9999------999958724
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.23 E-value=1.6e-10 Score=83.77 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=94.7
Q ss_pred CCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 89851331004621688-99999999999999539999883319999999999406-89699999999885689993462
Q 002711 157 VDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD-QSFDARLETFFDMVDKNLDGRIT 234 (889)
Q Consensus 157 ~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-~~~ee~l~~~F~~fDkd~dG~Is 234 (889)
..|.|+.+++.+..... -++..+.+++..+.+.+. +|.|+++||..++..+.. ...+..++.+|+.+|.|+||.|+
T Consensus 4 ~~~~l~~e~l~~l~~~t~f~~~ei~~l~~~F~~~~~--~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (201)
T d1omra_ 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFLKECP--SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81 (201)
T ss_dssp SSCTHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHCT--TSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 667789999999998579999999999999997796--998649999999999668898799999999985669998275
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9999999996420162013688799999999886199999751399999999819
Q 002711 235 EEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 235 ~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
.+||...+........ ++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 82 f~EF~~~~~~~~~~~~--------~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~ 128 (201)
T d1omra_ 82 FKEYVIALHMTSAGKT--------NQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128 (201)
T ss_dssp HHHHHHHHHHHHSSCG--------GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred EHHHHHHHHHHCCCCH--------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 3157788875222031--------8999999998704789852899999999998
|
| >d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Benzoate dioxygenase reductase species: Acinetobacter sp. [TaxId: 472]
Probab=99.22 E-value=2.9e-11 Score=88.73 Aligned_cols=91 Identities=20% Similarity=0.426 Sum_probs=77.9
Q ss_pred CCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEC--CCCHHHHH
Q ss_conf 0179999999559999999965899---743786389999767799742260631069999169999855--85127899
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGDDYLSIHIRTL--GDWTSQLK 650 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~L~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~~~~lsl~Ir~~--G~wT~~L~ 650 (889)
+..+|++++.+++++.++++..|.+ +.|+||||+.|.+|... ++||||++++|.++.+.++|+.. |.+|..|.
T Consensus 4 ~~~~v~~v~~lt~~v~~~~l~~~~~~~~~~f~pGQ~v~l~i~g~~--~~r~ys~~~~~~~~~~~~~i~~~~~G~~s~~l~ 81 (100)
T d1krha1 4 FEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGTT--ETRSYSFSSQPGNRLTGFVVRNVPQGKMSEYLS 81 (100)
T ss_dssp EEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTSS--CEEEEECCSCTTCSEEEEEEECCTTCHHHHHHH
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCC--EEEEEECCCCCCCCCEEEEEEEEECCCHHHHHH
T ss_conf 999999999859984999999289885788899979999979944--267761168876672289878860772244464
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 9986306999988766300002568999985579995977999
Q 002711 651 SIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 651 ~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~ 693 (889)
+. +++|+ ++.+.||+|.+
T Consensus 82 ~~-------------------l~~Gd------~v~v~gP~G~F 99 (100)
T d1krha1 82 VQ-------------------AKAGD------KMSFTGPFGSF 99 (100)
T ss_dssp TT-------------------CCTTC------EEEEEEEECSC
T ss_pred CC-------------------CCCCC------EEEEECCCCCC
T ss_conf 15-------------------89999------99995301052
|
| >d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: NADPH-cytochrome p450 reductase-like domain: NADPH-cytochrome p450 reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.22 E-value=8.5e-11 Score=85.63 Aligned_cols=123 Identities=11% Similarity=0.176 Sum_probs=73.6
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99889999937556659999999999886311000244457988768999998620599999938887165799999999
Q 002711 699 DYDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEV 778 (889)
Q Consensus 699 ~y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el 778 (889)
....+||||+|+|||||+|+|++........ ....+++|||++|+...-..+.+++.++
T Consensus 6 ~~~PiimIa~GTGIAPf~s~l~~r~~~~~~~---------------------~~~g~~~L~~G~R~~~~d~~y~~el~~~ 64 (160)
T d1ja1a3 6 STTPVIMVGPGTGIAPFMGFIQERAWLREQG---------------------KEVGETLLYYGCRRSDEDYLYREELARF 64 (160)
T ss_dssp TTSCEEEECCGGGGHHHHHHHHHHHHHHHTT---------------------CCCCCEEEEEEESCTTTCCTTHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHCC---------------------CCCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 9999999976382999999999999999707---------------------8878779998237753137799999999
Q ss_pred HHHCCCCCEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 8445998199999650445678-724689998774310138876445883212047999889999998547999199999
Q 002711 779 AEYDQDGVIELHNYCTSVYEEG-DARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFY 857 (889)
Q Consensus 779 ~~~~~~~~i~i~~y~T~~~~~~-d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~ 857 (889)
.+.. ....++...++...+. -.+.. .+-+- +.+.+.... ....||+
T Consensus 65 ~~~~--~~~~~~~a~Sr~~~~~~yvq~~---------------------------~~~~~-~~~~~~l~~---~~~~vYv 111 (160)
T d1ja1a3 65 HKDG--ALTQLNVAFSREQAHKVYVQHL---------------------------LKRDR-EHLWKLIHE---GGAHIYV 111 (160)
T ss_dssp HHTT--SSSEEEEEETTSSSSCCCHHHH---------------------------HHHTH-HHHHHHHHT---SCCEEEE
T ss_pred HHCC--CCCEEEEEEECCCCCCCCCCHH---------------------------HHHHH-HHHHHHHHC---CCCEEEE
T ss_conf 9709--9861577866365576531018---------------------------89989-999998862---9958999
Q ss_pred ECCH-HHHHHHHHHHHHHH
Q ss_conf 0972-68999999998420
Q 002711 858 CGAP-GLTGELRRLSQDFS 875 (889)
Q Consensus 858 CGP~-~l~~~vr~~~~~~~ 875 (889)
|||+ .|.++|++...+..
T Consensus 112 CG~~~~M~~~V~~~l~~i~ 130 (160)
T d1ja1a3 112 AGDARNMAKDVQNTFYDIV 130 (160)
T ss_dssp EEETTTHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
T ss_conf 6797553578999999999
|
| >d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Flavohemoglobin, central domain species: Alcaligenes eutrophus [TaxId: 106590]
Probab=99.21 E-value=3e-11 Score=88.59 Aligned_cols=103 Identities=19% Similarity=0.345 Sum_probs=79.2
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCC--CCCCCCCEEEEECCCCCCEEEEEEECCCCHHH
Q ss_conf 120179999999559999999965899---7437863899997677--99742260631069999169999855851278
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAV--SQFQWHPFSITSAPGDDYLSIHIRTLGDWTSQ 648 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~L~~~~p~~---~~~~pGQyv~l~~p~i--s~~e~HPFSIaS~p~~~~lsl~Ir~~G~wT~~ 648 (889)
.|+.++|.+++.+++++.++++..+.+ +.|+||||+.|.++.. ....+|||||+|+|+++.+.+.||...+-+
T Consensus 3 g~r~~~V~~~~~~t~dv~~~~l~~~~~~~~~~~~~GQ~v~l~~~~~~~~~~~~R~ySi~s~p~~~~~~~~v~~~~~~~-- 80 (111)
T d1cqxa2 3 GWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRTYRISVKREGGGP-- 80 (111)
T ss_dssp SCEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCCSSCEEEEEECCCBTT--
T ss_pred CCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC--
T ss_conf 966999999999289959999996896746678998789999615887403641423447866797389999946777--
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 9999863069999887663000025689999855799959779998
Q 002711 649 LKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 649 L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
.+.|..|+++...+++|+ .|.+.||+|.+.
T Consensus 81 ----------~~~G~~S~~l~~~l~~Gd------~v~v~gP~G~F~ 110 (111)
T d1cqxa2 81 ----------QPPGYVSNLLHDHVNVGD------QVKLAAPYGSFH 110 (111)
T ss_dssp ----------BCCCHHHHHHHHHCCTTC------EEEECCCBCSCS
T ss_pred ----------CCCCHHHHHHHHCCCCCC------EEEEECCCEEEE
T ss_conf ----------656635799985589999------999971571758
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.20 E-value=1.2e-10 Score=84.75 Aligned_cols=122 Identities=16% Similarity=0.056 Sum_probs=90.7
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999998062--898513310046216889999999999999953999988331999999999940689699999999
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F 222 (889)
...+...+..+| ++|.|+.+||...... ......+|..+ |.+++|+|+.+|+..++.......+++. ..+|
T Consensus 60 ~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~---~~~~~~~F~~~---D~d~sG~I~~~El~~~l~~~g~~~~~~~-~~~~ 132 (186)
T d1df0a1 60 IETCKIMVDMLDEDGSGKLGLKEFYILWTK---IQKYQKIYREI---DVDRSGTMNSYEMRKALEEAGFKLPCQL-HQVI 132 (186)
T ss_dssp HHHHHHHHHHHCCSSSSEECHHHHHHHHHH---HHHHHHHHHHH---CTTCCSCEEGGGHHHHHHHTTEECCHHH-HHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---HHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHCCCHHH-HHHH
T ss_conf 999999999975799984548888999876---79999998851---7799985049999999999775166889-9999
Q ss_pred HHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHH
Q ss_conf 8856899934629999999996420162013688799999999886199999751--3999999998
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLLL 287 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l~ 287 (889)
..+|.|+||.|+.+||..++.. .+.+..+|+.+|+|++|+| +++||..+..
T Consensus 133 ~~~d~d~dg~I~f~eFi~~~~~--------------l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~~ 185 (186)
T d1df0a1 133 VARFADDELIIDFDNFVRCLVR--------------LEILFKIFKQLDPENTGTIQLDLISWLSFSV 185 (186)
T ss_dssp HHHHCCSTTEECHHHHHHHHHH--------------HHHHHHHHHHHCTTCCSEEEEEHHHHHHHHT
T ss_pred HHHHCCCCCEEEHHHHHHHHHH--------------HHHHHHHHHHHCCCCCCCEEECHHHHHHHHH
T ss_conf 9997278981819999999999--------------9999999998689999948951999888841
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.20 E-value=2.1e-10 Score=83.10 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=96.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 420001369100999999998062--898513310046216889999999999999953999988331999999999940
Q 002711 133 LKFITKNVGTEGWGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT 210 (889)
Q Consensus 133 L~~i~~~~~~~~~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~ 210 (889)
|+.+....+.++ +++.|..+| ++|.|+.++|...+... ....+.|..+ |.+++|.|+.+||..++..++
T Consensus 44 l~~l~~~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~~---~~~~~~F~~~---D~~~~g~I~~~el~~~l~~~g 114 (182)
T d1y1xa_ 44 LSSAGVPFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHFI---LSMREGFRKR---DSSGDGRLDSNEVRAALLSSG 114 (182)
T ss_dssp HCBTTBCCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHHH---HHHHHHHHHH---CTTSSSCBCHHHHHHHHHTTS
T ss_pred HHHHCCCCCHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCHHCC---CCCCCHHHHHHHHHHHHHHHC
T ss_conf 998504686666---5554201122222233432200011222---2221100002---224551344577887788708
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHH
Q ss_conf 6896999999998856899934629999999996420162013688799999999886199999751--399999999
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLL 286 (889)
Q Consensus 211 ~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l 286 (889)
....++.++.+|+.+|.|+||.|+.+||.+++.. +. .+..+|+.+|.+++|+| +|+||..--
T Consensus 115 ~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~------l~--------~~~~~F~~~D~~~~G~is~~~~~f~~~~ 178 (182)
T d1y1xa_ 115 YQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF------VC--------RVRNVFAFYDRERTGQVTFTFDTFIGGS 178 (182)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HH--------HHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH------HH--------HHHHHHHHHCCCCCCCEEEEHHHHHHHH
T ss_conf 7136889998886415589998099999999999------99--------9999999868899994896699999877
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.19 E-value=2.1e-10 Score=83.03 Aligned_cols=122 Identities=13% Similarity=0.080 Sum_probs=90.5
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999998062--898513310046216889999999999999953999988331999999999940689699999999
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F 222 (889)
...+++.+..+| ++|.|+.+||....... ......|..+ |.+++|.|+.+||..++.......+++.++.++
T Consensus 46 ~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~---~~~~~~f~~~---D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~ 119 (173)
T d1alva_ 46 IDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---KKWQAIYKQF---DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII 119 (173)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---HHHHHHHHHH---CTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH---HHHHHHHHHH---CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998546898764402343343222---6788899970---657998066999999999988765899998853
Q ss_pred HHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHH
Q ss_conf 8856899934629999999996420162013688799999999886199999751--3999999998
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLLL 287 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l~ 287 (889)
.+|.|+||.|+.+||.+++... +.+..+|+.+|.|++|.| +++||..+..
T Consensus 120 -~~d~d~~G~i~~~EF~~~~~~~--------------~~~~~~f~~~D~d~~G~it~~~~efl~~~~ 171 (173)
T d1alva_ 120 -RRYSDEGGNMDFDNFISCLVRL--------------DAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171 (173)
T ss_dssp -HHHTCSSSCBCHHHHHHHHHHH--------------HHHHHHHHHHSSSCCSEEEEEHHHHHHHHH
T ss_pred -CCCCCCCCEEEHHHHHHHHHHH--------------HHHHHHHHHHCCCCCCCEEECHHHHHHHHH
T ss_conf -1223799767599999999999--------------999999998689999938966999999987
|
| >d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain family: NADPH-cytochrome p450 reductase-like domain: Sulfite reductase flavoprotein species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=6.4e-11 Score=86.45 Aligned_cols=120 Identities=8% Similarity=0.125 Sum_probs=73.0
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 98899999375566599999999998863110002444579887689999986205999999388871657999999998
Q 002711 700 YDVLLLVGLGIGATPLISIIKDVLNNIKQQKEIEEGITEDGGATKNSKKKPFATKRAYFYWVTREQGSFEWFRGVMNEVA 779 (889)
Q Consensus 700 y~~vllVagGiGITP~lsiL~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~liW~~R~~~~~~wf~~~l~el~ 779 (889)
..++||||||+||||++|+|+++..+. ..+++.++|.+|.......|.+++.++.
T Consensus 6 ~~plvlIa~GtGIaP~~s~l~~~~~~~-------------------------~~~~~~l~~~~~~~~~~~~~~~el~~~~ 60 (153)
T d1ddga2 6 ETPVIMIGPGTGIAPFRAFMQQRAADE-------------------------APGKNWLFFGNPHFTEDFLYQVEWQRYV 60 (153)
T ss_dssp TSCEEEECCGGGGHHHHHHHHHHHHHT-------------------------CCSCEEEEEEESCHHHHCTTHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHC-------------------------CCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999999987521999999999999836-------------------------8773488515667077777689999999
Q ss_pred HHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 44599819999965044567872468999877431013887644588321204799988999999854799919999909
Q 002711 780 EYDQDGVIELHNYCTSVYEEGDARSALITMLQSIHHAKNGLDIVSGTRVKTHFARPNWRTVFKHVAVKHTDERVGVFYCG 859 (889)
Q Consensus 780 ~~~~~~~i~i~~y~T~~~~~~d~~~~~~~m~~~l~~~~~~~d~~sg~~~~~~~GRPd~~~v~~~~~~~~~~~~v~V~~CG 859 (889)
+.. ....++...++........ .+..+.+...+ ..... ....+|+||
T Consensus 61 ~~~--~~~~~~~~~s~~~~~~~~~--------------------------~~~~~~~~~~~-~~~~~----~~~~~yiCG 107 (153)
T d1ddga2 61 KEG--VLTRIDLAWSRDQKEKVYV--------------------------QDKLREQGAEL-WRWIN----DGAHIYVCG 107 (153)
T ss_dssp HTT--SCCEEEEEETTSSSSCCCH--------------------------HHHHHHTHHHH-HHHHH----TTCEEEEEE
T ss_pred HCC--CCCEEEEEEEECCCCCCCC--------------------------CCHHHHHHHHH-HHHHC----CCCEEEEEC
T ss_conf 749--9844799997245676323--------------------------41489999998-75212----698899988
Q ss_pred CHH-HHHHHHHHHHHHHCC
Q ss_conf 726-899999999842017
Q 002711 860 APG-LTGELRRLSQDFSRK 877 (889)
Q Consensus 860 P~~-l~~~vr~~~~~~~~~ 877 (889)
||. |.+++++.+.+...+
T Consensus 108 ~p~~~~~~v~~~L~~~~~~ 126 (153)
T d1ddga2 108 DANRMAKDVEQALLEVIAE 126 (153)
T ss_dssp CTTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
T ss_conf 9733079999999999998
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.17 E-value=3.8e-10 Score=81.37 Aligned_cols=121 Identities=16% Similarity=0.055 Sum_probs=90.9
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999998062--898513310046216889999999999999953999988331999999999940689699999999
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F 222 (889)
...+++.+..+| ++|.|+.+||...+... ....++|. ..|.+++|.|+.+||..++..++....++.++.++
T Consensus 62 ~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~---~~~~~~F~---~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~ 135 (188)
T d1qxpa2 62 LESCRSMVNLMDRDGNGKLGLVEFNILWNRI---RNYLTIFR---KFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIV 135 (188)
T ss_dssp HHHHHHHHHHHCC--CCCCCSSSHHHHHHHH---HHHHHHHG---GGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH---HHHHHHHH---HHCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9999999998667899835289999887542---89999999---82889998787999999999866339999999999
Q ss_pred HHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHH
Q ss_conf 8856899934629999999996420162013688799999999886199999751--399999999
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLL 286 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l 286 (889)
..+ .|++|.|+.+||..++... +.+..+|+.+|+|++|+| +++||..+.
T Consensus 136 ~~~-~~~dg~i~f~eFi~~~~~l--------------~~~~~~F~~~D~~~~G~i~l~~~efl~~~ 186 (188)
T d1qxpa2 136 ARF-ADDELIIDFDNFVRCLVRL--------------EILFKIFKQLDPENTGTIQLDLISWLSFS 186 (188)
T ss_dssp HHT-SCSSSBCCHHHHHHHHHHH--------------HHHHHHHHHSCSSCCSCEEEEHHHHHHHT
T ss_pred HHH-CCCCCCCCHHHHHHHHHHH--------------HHHHHHHHHHCCCCCCEEEEEHHHHHHHH
T ss_conf 874-5899829799999999999--------------99999999858899980894099998997
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.15 E-value=1.6e-10 Score=83.87 Aligned_cols=104 Identities=15% Similarity=0.242 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
++.+|..+| .++ +|.|+++||..++..+.....++.++.+|..+|.|++|.|+.+|+..++..... .... ..
T Consensus 2 ae~~F~~~D-~d~--dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~-~~~~----~~ 73 (134)
T d1jfja_ 2 AEALFKEID-VNG--DGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQG-QDLS----DD 73 (134)
T ss_dssp HHHHHHHHC-TTC--SSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSC-CSSH----HH
T ss_pred HHHHHHHHC-CCC--CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCC----CC
T ss_conf 889999986-898--397859999999997389999999999888764015542233222222221222-2222----22
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99999998861999997513999999998199
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...+..+|+.+|.|++|+|+.+||..++....
T Consensus 74 ~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~ 105 (134)
T d1jfja_ 74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG 105 (134)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 22222222123335577134999988988627
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.14 E-value=4.1e-10 Score=81.16 Aligned_cols=120 Identities=17% Similarity=0.212 Sum_probs=63.9
Q ss_pred CCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCCCEEEHH
Q ss_conf 851331004621688-99999999999999539999883319999999999406-8969999999988568999346299
Q 002711 159 GMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD-QSFDARLETFFDMVDKNLDGRITEE 236 (889)
Q Consensus 159 G~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-~~~ee~l~~~F~~fDkd~dG~Is~e 236 (889)
..++.+++.+..... -++..+++++..+.+.+. +|.|+..||..++..+.. ....+-++.+|+.+|+|+||.|+.+
T Consensus 6 S~l~~e~l~~l~~~t~fs~~Ei~~l~~~F~~~~~--~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~ 83 (190)
T d1fpwa_ 6 SKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCP--SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFE 83 (190)
T ss_dssp CCSTTHHHHHHTTTCCSTHHHHHHHHHHHHHHCT--TCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHH
T ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 7799999999999749999999999999998789--99824899999999977999869999999999676899946099
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999642016201368879999999988619999975139999999981
Q 002711 237 EVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 237 El~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
||...+........ ++.+..+|+.+|.|++|+|+.+||..++..
T Consensus 84 Ef~~~~~~~~~~~~--------~e~~~~~F~~~D~d~dG~is~~E~~~~~~~ 127 (190)
T d1fpwa_ 84 EFITVLSTTSRGTL--------EEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp HHHHHHHHHSCCCS--------THHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCH--------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999722766--------889999898734399983769999999999
|
| >d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Flavohemoglobin, central domain species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=3e-10 Score=82.06 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=78.3
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCC--CCCCCCEEEEECCCCCCEEEEEEEC--CCCH
Q ss_conf 120179999999559999999965899---74378638999976779--9742260631069999169999855--8512
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVS--QFQWHPFSITSAPGDDYLSIHIRTL--GDWT 646 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~L~~~~p~~---~~~~pGQyv~l~~p~is--~~e~HPFSIaS~p~~~~lsl~Ir~~--G~wT 646 (889)
.|+.++|++++.+++++.++++..+.+ +.|+||||+.|.++... ....++||++|.|+++.+.+.||.. |..|
T Consensus 5 g~~~~~v~~~~~~t~~~~~~~l~~~d~~~~~~~~pGQ~v~l~~~~~~~~~~~~r~~s~ss~~~~~~~~i~vk~~~~G~~S 84 (107)
T d1gvha2 5 GTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVS 84 (107)
T ss_dssp SEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCCSSCEEEEEECCTTCHHH
T ss_pred CCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCHH
T ss_conf 88999999999938993999998698575667899778999960366674377541356799998269999980786425
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 78999986306999988766300002568999985579995977999
Q 002711 647 SQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 647 ~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~ 693 (889)
+.|.+. +++|+ .|.+.||+|.+
T Consensus 85 ~~l~~~-------------------l~~Gd------~v~v~gP~G~F 106 (107)
T d1gvha2 85 NWLHNH-------------------ANVGD------VVKLVAPAGDF 106 (107)
T ss_dssp HHHHHT-------------------CCTTC------EEEEEEEECSC
T ss_pred HHHHHC-------------------CCCCC------EEEEECCCCCC
T ss_conf 899846-------------------89999------99995865568
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1.9e-11 Score=89.86 Aligned_cols=140 Identities=11% Similarity=0.215 Sum_probs=92.7
Q ss_pred HHHHHHC--CC--CCCCCCHHHHCCCCCCCCCHH--HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 9999980--62--898513310046216889999--99999999995399998833199999999994068969999999
Q 002711 148 VEKRFDE--LA--VDGMLPKSSFGQCIGMNESKD--FASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETF 221 (889)
Q Consensus 148 l~~~F~~--ld--~dG~Is~~ef~~~lg~~~~~~--~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~ 221 (889)
+++.|.. +| +||+|+.+|+.+++....... ....+-..+...|.+++|.|+|+||..++..++. .++++.+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CHHHHTT
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC---HHHHHHH
T ss_conf 9999999912118999793999999998831137899999860403566668786479999999864687---7999999
Q ss_pred HHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHCC
Q ss_conf 9885689993462999999999642016201368--879999999988619999----97513999999998199
Q 002711 222 FDMVDKNLDGRITEEEVKEIIALSASANKLSKIQ--ERVEEYAALIMEELDPHN----LGYIELYNLEMLLLQAP 290 (889)
Q Consensus 222 F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~--e~~~e~~~~i~~e~D~d~----dG~Is~~EF~~~l~~~p 290 (889)
|+.||.|++|+||.+||+.++........+.+.. .-.++.+..++..++++. +|+|++++|...|....
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~e 158 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPE 158 (170)
T ss_dssp CC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTT
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCCC
T ss_conf 999847998846399999999988402244331365589999999999972263345488398999999976965
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.07 E-value=7.7e-10 Score=79.35 Aligned_cols=102 Identities=17% Similarity=0.178 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996420162013688
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQE 256 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e 256 (889)
...++++..+.+... +|.|+++||..++........+..++.+|+.||.|+||.|+.+||...+........
T Consensus 21 ~ei~~~~~~F~~~~~--~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~------ 92 (189)
T d1jbaa_ 21 AQLQEWYKKFLEECP--SGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL------ 92 (189)
T ss_dssp HHHHHHHHHHHSSST--TCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC------
T ss_pred HHHHHHHHHHCCCCC--CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCH------
T ss_conf 999999998641497--985539999999998499842999999999865699970763168788876303666------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 79999999988619999975139999999981
Q 002711 257 RVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 257 ~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.+..+|+.+|.|++|.|+.+||..++..
T Consensus 93 --~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~ 122 (189)
T d1jbaa_ 93 --EHKLKWTFKIYDKDRNGCIDRQELLDIVES 122 (189)
T ss_dssp --THHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf --778999985541389971407678999998
|
| >d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Dihydroorotate dehydrogenase B, PyrK subunit species: Lactococcus lactis, isozyme B [TaxId: 1358]
Probab=99.05 E-value=2.3e-10 Score=82.77 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=75.8
Q ss_pred CCEEEEEEEEECCCEEEEEEECCCC-CCCCCCCEEEEEECCCCCCCCCCEEEEECC-CCCCEEEEEEECC--CCHHHHHH
Q ss_conf 0179999999559999999965899-743786389999767799742260631069-9991699998558--51278999
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG-FKYTSGQYIFVNCAAVSQFQWHPFSITSAP-GDDYLSIHIRTLG--DWTSQLKS 651 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~L~~~~p~~-~~~~pGQyv~l~~p~is~~e~HPFSIaS~p-~~~~lsl~Ir~~G--~wT~~L~~ 651 (889)
..++|++++.+.+++.+|+++.|.. ..++||||+.|.+|......++||||+++| +++.+++.|+..+ ..|..|.+
T Consensus 5 ~~~~V~~~~~~~~~i~~l~l~~~~~~~~~~pGQfv~l~~~~~~~~~~R~~Si~~~~~~~~~i~~~i~~~~~g~~t~~l~~ 84 (101)
T d1ep3b1 5 EMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSK 84 (101)
T ss_dssp EEEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEETTTTEEEEEEECCCTTSHHHHHHT
T ss_pred EEEEEEEEEEECCCEEEEEEECCCHHHCCCCCCEEEEECCCCCCEEECCCEEEECCCCCCEEEEEEEECCCCHHHHHHHH
T ss_conf 36899998893499799999878765236999268887057862761022462079987289999732275035478870
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 986306999988766300002568999985579995977999
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAP 693 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~ 693 (889)
+++|+ +|.|.||||.+
T Consensus 85 --------------------l~~Gd------~v~v~GP~G~~ 100 (101)
T d1ep3b1 85 --------------------LESGA------KVDVMGPLGNG 100 (101)
T ss_dssp --------------------CCTTC------EEEEEEEESBC
T ss_pred --------------------CCCCC------EEEEECCCCCC
T ss_conf --------------------89999------99995664898
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.05 E-value=5.9e-10 Score=80.11 Aligned_cols=72 Identities=15% Similarity=0.240 Sum_probs=59.7
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 68969999999988568999346299999999964201620136887999999998861999997513999999998199
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 211 ~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...+++.++.+|++||+|++|+|+.+||+.++..... .++ ++.+..+|+++|.|++|.|+|+||..+|.+..
T Consensus 4 e~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~------~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~ 75 (77)
T d1oqpa_ 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE--NLT------EEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 75 (77)
T ss_dssp TSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC--CCC------HHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCC--CCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCC
T ss_conf 8567999999999984997987446999999999489--999------99999999985899889391999999997047
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.04 E-value=4.6e-10 Score=80.82 Aligned_cols=70 Identities=27% Similarity=0.371 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 689699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 211 ~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+..+++.++.+|+.||+|++|+|+.+||+.+++... ..++ ++.++.+|+++|.|++|.|+|+||..+|..
T Consensus 4 ~~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg--~~~~------~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 4 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVI------EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSS--SCCC------HHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
T ss_conf 779599999999998389859283999988998648--7764------999999999848899980849999999986
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.03 E-value=8.1e-09 Score=72.64 Aligned_cols=107 Identities=20% Similarity=0.211 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996420162013688
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQE 256 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e 256 (889)
+...++-+++...|.+++|.|+++||..++........++.++.+|+.+|.+++|.|+.+|+...+...... .
T Consensus 6 ~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-------~ 78 (146)
T d1exra_ 6 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE-------Q 78 (146)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH-------H
T ss_pred HHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC-------C
T ss_conf 999999999999808999818778999999731799979999999886188999836589999999987412-------6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 7999999998861999997513999999998199
Q 002711 257 RVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 257 ~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 79 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 112 (146)
T d1exra_ 79 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 112 (146)
T ss_dssp HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 8399999999972789998197999999999875
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.02 E-value=5.3e-10 Score=80.40 Aligned_cols=70 Identities=26% Similarity=0.381 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 689699999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 211 DQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 211 ~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
...++++++.+|+.||+|++|+|+.+||+.++.... ..++ ++.++.+|.++|.|+||.|+|+||..+|..
T Consensus 10 ~~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~~------~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETIT------EDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSS--SCCC------HHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
T ss_conf 589799999999998689999243899998888417--8877------999999999978998994909999999986
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=6.9e-10 Score=79.64 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=57.7
Q ss_pred HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999988568999346299999999964201--------6201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASA--------NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~--------~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+|++||.||||+|+.+||+.++...... .......+..++.+..+|+++|.|+||+||++||..++.+
T Consensus 17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 17 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
T ss_conf 79999999777998919899999999998775130210011111207789999999999808999996929999999843
Q ss_pred C
Q ss_conf 9
Q 002711 289 A 289 (889)
Q Consensus 289 ~ 289 (889)
.
T Consensus 97 ~ 97 (99)
T d1snla_ 97 K 97 (99)
T ss_dssp C
T ss_pred C
T ss_conf 7
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=7.8e-09 Score=72.72 Aligned_cols=119 Identities=14% Similarity=0.182 Sum_probs=64.1
Q ss_pred CCCHHHHCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCEEEHHH
Q ss_conf 5133100462168-8999999999999995399998833199999999994068-9699999999885689993462999
Q 002711 160 MLPKSSFGQCIGM-NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ-SFDARLETFFDMVDKNLDGRITEEE 237 (889)
Q Consensus 160 ~Is~~ef~~~lg~-~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~-~~ee~l~~~F~~fDkd~dG~Is~eE 237 (889)
+++.+++.+.... .-++..+..++..+.+.+. +|.|+.+||..++...... ...+-.+.+|+.+|+|+||.|+.+|
T Consensus 4 kl~~e~i~~l~~~t~fs~~Ei~~l~~~F~~~~~--~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~E 81 (187)
T d1g8ia_ 4 KLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCP--SGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSE 81 (187)
T ss_dssp SCCHHHHHHHHHTSSSCHHHHHHHHHHHHHHCT--TSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 579999999998549999999999999997789--988279999999999669998899999999994768999785999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999642016201368879999999988619999975139999999981
Q 002711 238 VKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 238 l~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
|...+.....+ ..++.+..+|+.+|.|++|+|+.+|+..++..
T Consensus 82 F~~~l~~~~~~--------~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~ 124 (187)
T d1g8ia_ 82 FIQALSVTSRG--------TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 124 (187)
T ss_dssp HHHHHHHHHHC--------CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCC--------CHHHHHHHHHHHHHCCCCCEECHHHHHHHHHH
T ss_conf 99999986547--------60336999999980699976969999999999
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.98 E-value=6.6e-09 Score=73.23 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHH
Q ss_conf 99999999999995399998833199999999994068-96999999998856899934629999999996420162013
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ-SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSK 253 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~-~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~ 253 (889)
++..++.++..+.+.++ +|.|+++||..++..+... ...+.++.+|+.||+|++|.|+.+||...+.......
T Consensus 11 t~~ei~~l~~~F~~~~~--~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~---- 84 (178)
T d1s6ca_ 11 TKRELQVLYRGFKNECP--SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT---- 84 (178)
T ss_dssp CHHHHHHHHHHHHHHCT--TSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC----
T ss_pred CHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC----
T ss_conf 99999999999987784--998169999999999479998799999999997789999666799999999871156----
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 68879999999988619999975139999999981
Q 002711 254 IQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 254 ~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+..+|+.+|.|++|.|+.+|+..++..
T Consensus 85 ----~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~ 115 (178)
T d1s6ca_ 85 ----VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 115 (178)
T ss_dssp ----HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf ----6999999987522589980559999989998
|
| >d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Phthalate dioxygenase reductase species: Pseudomonas cepacia, db01 [TaxId: 292]
Probab=98.98 E-value=2.2e-09 Score=76.34 Aligned_cols=90 Identities=13% Similarity=0.318 Sum_probs=72.1
Q ss_pred HCCCCEEEEEEEEECCCEEEEEEECCCC--C-CCCCCCEEEEEECCCCCCCCCCEEEEECCCC-CCEEEEEEECCC--C-
Q ss_conf 5120179999999559999999965899--7-4378638999976779974226063106999-916999985585--1-
Q 002711 573 SGYKSVRILKVAVYPGNVLALQMSKPQG--F-KYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTLGD--W- 645 (889)
Q Consensus 573 ~~~~~~~i~~v~~~~~~v~~L~~~~p~~--~-~~~pGQyv~l~~p~is~~e~HPFSIaS~p~~-~~lsl~Ir~~G~--w- 645 (889)
..+..++|++++.+..++..++|..|.+ + .|+||||+-|.+|.. .+++|||+|+|.+ +++.++||...+ .
T Consensus 6 ~~~~~~~V~~~~~~t~di~~~~l~~~~g~~lp~f~pGQ~v~v~~~~~---~~R~YSl~s~p~~~~~~~i~Vk~~~~g~~~ 82 (103)
T d2piaa1 6 DGFLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPNG---SRRTYSLCNDSQERNRYVIAVKRDSNGRGG 82 (103)
T ss_dssp TTCEEEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTTS---CEEEEECCSCTTCCSEEEEEEECCTTSCSH
T ss_pred CCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECC---EEEEEEEECCCCCCCEEEEEEEEECCCCCC
T ss_conf 97399999999994799299999979988377889986599999454---058889844989899999999997797544
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 278999986306999988766300002568999985579995977
Q 002711 646 TSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPY 690 (889)
Q Consensus 646 T~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPy 690 (889)
++.|. .++++|+ ++.|.||-
T Consensus 83 S~~l~-------------------~~l~~Gd------~v~v~~Pr 102 (103)
T d2piaa1 83 SISFI-------------------DDTSEGD------AVEVSLPR 102 (103)
T ss_dssp HHHHH-------------------HSCCTTC------EEEECCCB
T ss_pred HHHHH-------------------HCCCCCC------EEEEECCC
T ss_conf 18998-------------------2589999------99993781
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=98.97 E-value=2.1e-09 Score=76.50 Aligned_cols=94 Identities=20% Similarity=0.386 Sum_probs=74.5
Q ss_pred HHHHHHHCCCCCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH---CCCCHHHHHHHHH
Q ss_conf 999999806289851331004621688-999999999999995399998833199999999994---0689699999999
Q 002711 147 EVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQI---TDQSFDARLETFF 222 (889)
Q Consensus 147 ~l~~~F~~ld~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~---~~~~~ee~l~~~F 222 (889)
++.+.++.++.+|.|+++||...+++. .+.....++|..+ |.|+ +|+|+.+||..++..+ +....++.++.+|
T Consensus 10 di~~~~~~~~~~G~idf~eF~~~~~~~~~~~~~l~~~F~~~-D~d~--~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~ 86 (109)
T d5pala_ 10 DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEIL-DKDQ--SGFIEEEELKGVLKGFSAHGRDLNDTETKALL 86 (109)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHTCTTCCHHHHHHHHHHH-CTTC--SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH-CCCC--CCEECHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 99999985489994959999999975279899999997615-5899--98496999999999820046768889999999
Q ss_pred HHHCCCCCCEEEHHHHHHHHH
Q ss_conf 885689993462999999999
Q 002711 223 DMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~ 243 (889)
+.+|.|+||+|+.+||..+|.
T Consensus 87 ~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 87 AAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHCCCCCCCEEHHHHHHHHH
T ss_conf 980889899794999999997
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.96 E-value=1e-09 Score=78.58 Aligned_cols=95 Identities=22% Similarity=0.382 Sum_probs=75.5
Q ss_pred HHHHHHHHCCCCCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC---CCCHHHHHHHH
Q ss_conf 9999999806289851331004621688-9999999999999953999988331999999999940---68969999999
Q 002711 146 GEVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT---DQSFDARLETF 221 (889)
Q Consensus 146 ~~l~~~F~~ld~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~---~~~~ee~l~~~ 221 (889)
.++.+.++.++.+|.|+++||...++.. .+.....++|.. .|.|+ +|.|+.+|+..++..+. ....++.++.+
T Consensus 9 eeI~~~~~~~d~dG~idf~EF~~~~~~~~~~~~~~~~~F~~-~D~d~--~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~ 85 (109)
T d1pvaa_ 9 DDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKA-IDADA--SGFIEEEELKFVLKSFAADGRDLTDAETKAF 85 (109)
T ss_dssp HHHHHHHHHTCSTTCCCHHHHHHHHTCTTSCHHHHHHHHHH-HCTTC--SSSBCHHHHHTGGGGTCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHC-CCCCC--CCEECHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 99999998528899786999999998714999999998418-15899--6857399999999984204788999999999
Q ss_pred HHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 9885689993462999999999
Q 002711 222 FDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 222 F~~fDkd~dG~Is~eEl~~il~ 243 (889)
|+.+|+|+||+|+.+||..+|.
T Consensus 86 ~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d1pvaa_ 86 LKAADKDGDGKIGIDEFETLVH 107 (109)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHCCCCCCCEEHHHHHHHHH
T ss_conf 9997899769691999999998
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.94 E-value=9.1e-10 Score=78.86 Aligned_cols=64 Identities=19% Similarity=0.362 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 999999998856899934629999999996420162013688799999999886199999751399999999
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
++.++.+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+++++|.|++|.|+|+||.++|
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg--~~~~------~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EKLT------DEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT--CCCC------HHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--CCCC------HHHHHHHHHHCCCCCCCCEEHHHHHHHC
T ss_conf 89999999998679999677999999999958--9998------9999999998198999969399999879
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.94 E-value=1.1e-08 Score=71.80 Aligned_cols=120 Identities=15% Similarity=0.184 Sum_probs=86.0
Q ss_pred CCCHHHHCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCEEEHHH
Q ss_conf 5133100462168-8999999999999995399998833199999999994068-9699999999885689993462999
Q 002711 160 MLPKSSFGQCIGM-NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQ-SFDARLETFFDMVDKNLDGRITEEE 237 (889)
Q Consensus 160 ~Is~~ef~~~lg~-~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~-~~ee~l~~~F~~fDkd~dG~Is~eE 237 (889)
+++.+++.+.... .-+...+++++..+.+.+. +|.|+.+||..++..+... ...+..+.+|+.+|++++|.|+.+|
T Consensus 3 ~l~~~~~~~L~~~t~fs~~ei~~l~~~F~~~~~--~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~e 80 (181)
T d1bjfa_ 3 KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCP--SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFRE 80 (181)
T ss_dssp CCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHST--TSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHH
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEHHH
T ss_conf 999999999998659999999999999986689--998579999999998579998899999998730779999672999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9999996420162013688799999999886199999751399999999819
Q 002711 238 VKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 238 l~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
|...+....... .++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 81 Fl~~~~~~~~~~--------~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~ 124 (181)
T d1bjfa_ 81 FIIALSVTSRGK--------LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 124 (181)
T ss_dssp HHHHHHHHTSSC--------HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--------HHHHHHHHHHHHCCCCCCEECHHHHHHHHHHH
T ss_conf 999999980202--------18999999887603999716299999999987
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.94 E-value=2e-09 Score=76.59 Aligned_cols=65 Identities=23% Similarity=0.441 Sum_probs=54.8
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.++.+|++||+|+||+|+.+||+.+++... ..++ ++.+..+|.++|.|++|.|+|+||..+|.+
T Consensus 14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~s------~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 14 AEFKAAFDMFDADGGGDISTKELGTVMRMLG--QNPT------KEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTT--CCCC------HHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEECHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 9999999998289998572368899999808--9999------899999999857999986829999999998
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=98.93 E-value=2.4e-09 Score=76.07 Aligned_cols=67 Identities=21% Similarity=0.320 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 9999999988568999346299999999964201620136887999999998861999997513999999998199
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.++.+|+.||+|+||+|+.+||+.+++... + .+ ++.+..+|+++|.|++|.|+|+||..+|....
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg--~-~~------~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~ 71 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLG--S-VT------PDEVRRMMAEIDTDGDGFISFDEFTDFARANR 71 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT--T-CC------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH--C-CC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCC
T ss_conf 99999999998789899785999999999864--3-88------99999999985799998282999999999781
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.92 E-value=4.7e-10 Score=80.76 Aligned_cols=67 Identities=24% Similarity=0.304 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.++.+|+.||+|++|+|+.+||+.++..... ..++ ++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 1 eeel~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~s------~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGE-EPLT------DAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp CHHHHHHHHHHSCSGGGEECHHHHHHHSSTTTT-CCCC------HHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred CHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCC-CCCC------HHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
T ss_conf 989999999886998491749999999998489-9999------999999999867999991819999999971
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.89 E-value=2.3e-08 Score=69.62 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999999953999988331999999999940689699999999885689993462999999999642016201368
Q 002711 176 KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQ 255 (889)
Q Consensus 176 ~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~ 255 (889)
.+...++-+++...|.+++|.|+++||..++........+..++.+|..+|.+++|.|+..|+...+...... ...
T Consensus 16 ~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~----~~~ 91 (162)
T d1topa_ 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE----DAK 91 (162)
T ss_dssp HHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHHHHHH----HCC
T ss_conf 9999999999999858999748279987778505885268888765430333899883210023443333444----113
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 87999999998861999997513999999998199
Q 002711 256 ERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 256 e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...++....+|+.+|.|++|+|+.+||..++....
T Consensus 92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~ 126 (162)
T d1topa_ 92 GKSEEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 58699999999987879998795899999987407
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.87 E-value=4.3e-09 Score=74.42 Aligned_cols=65 Identities=23% Similarity=0.309 Sum_probs=54.8
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.++.+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+|.++|.|++|.|+|+||..+|.+
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~t------~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSLG--LSPS------EAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHT--CCCC------HHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCEECHHHHHHHHHHHC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 9999999988589997587479999999808--9999------899999999858999984829999999998
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.86 E-value=4e-09 Score=74.63 Aligned_cols=64 Identities=20% Similarity=0.328 Sum_probs=54.1
Q ss_pred HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+|+.||+|++|+|+.+||+.+++... ..++ ++.++.+|+.+|.|+||.|+++||..+|.+
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg--~~~~------~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFS--PYFT------QEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTC--TTSC------HHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 499999998799839286999999999743--3655------489999999857998893819999999997
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.86 E-value=1.2e-08 Score=71.60 Aligned_cols=107 Identities=19% Similarity=0.153 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC--CCCEEEHHHHHHHHHHHHHCCCCHH
Q ss_conf 99999999999953999988331999999999940689699999999885689--9934629999999996420162013
Q 002711 176 KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKN--LDGRITEEEVKEIIALSASANKLSK 253 (889)
Q Consensus 176 ~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd--~dG~Is~eEl~~il~~~~~~~~l~~ 253 (889)
.+...++|..+ |.++ +|.|+.+||..++..++...+.+.+..++..+|.| ++|.|+.+||..++..........
T Consensus 3 ~eelke~F~~~-D~d~--~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~- 78 (145)
T d2mysc_ 3 ADDFKEAFLLF-DRTG--DAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQG- 78 (145)
T ss_pred HHHHHHHHHHH-CCCC--CCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC-
T ss_conf 79999999997-6899--8809899999999986324023344788988863114457402257788876543001333-
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 6887999999998861999997513999999998199
Q 002711 254 IQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 254 ~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..+.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 79 ----~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 111 (145)
T d2mysc_ 79 ----TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 111 (145)
T ss_pred ----HHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHC
T ss_conf ----277888877886117998783999999999818
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=6.2e-08 Score=66.80 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
.+++-.++...|.+++|.|+++||..++...+....++.+...+..+|.+++|.|+.+|+...+...... ...
T Consensus 5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-------~~~ 77 (141)
T d2obha1 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE-------KDT 77 (141)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-------HHH
T ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHH-------HCC
T ss_conf 9999999999868998818499998788861875027889877776234789802569999999998750-------032
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99999998861999997513999999998199
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.+..+|..+|.+++|+|+.+||..++.+..
T Consensus 78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g 109 (141)
T d2obha1 78 KEEILKAFKLFDDDETGKISFKNLKRVAKELG 109 (141)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 79999999986646899834999999999958
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.84 E-value=2.8e-09 Score=75.70 Aligned_cols=69 Identities=13% Similarity=0.197 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHCCC--CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 699999999885689--993462999999999642016201368879999999988619999975139999999981
Q 002711 214 FDARLETFFDMVDKN--LDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 214 ~ee~l~~~F~~fDkd--~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.++.+|++||.+ ++|+|+.+||+.++.........+ ++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~------~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKG------MSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTT------SCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCCC------HHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999998764589999998999999999848867988------999999999723279980969999999998
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.83 E-value=6.3e-09 Score=73.35 Aligned_cols=66 Identities=15% Similarity=0.371 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHCCCC-CCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999998856899-93462999999999642016201368879999999988619999975139999999981
Q 002711 215 DARLETFFDMVDKNL-DGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~~F~~fDkd~-dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+.++.+|+.||+|+ ||.|+..||+.+++... ...+ ++.++.++.++|.|++|.|+|+||..+|.+
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg--~~~t------~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPT------PEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTT--CCCC------HHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 999999999985769998671899999998728--9998------899999999947899974739999999985
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.82 E-value=9.1e-08 Score=65.73 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999999999995399998833199999999994068969999999988568999346299999999964201620136
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKI 254 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~ 254 (889)
+++.+.++-+++...|.+++|.|+++||..++...+....+..+...+..++.++++.++.+++...+....... .
T Consensus 5 s~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 80 (146)
T d1lkja_ 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN--D-- 80 (146)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCC--C--
T ss_pred CHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC--C--
T ss_conf 999999999999997889989693999999998528998799998888876358865466899999999861012--3--
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 8879999999988619999975139999999981998
Q 002711 255 QERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 255 ~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
.++.+..+|+.+|.|++|+|+.+||..++.....
T Consensus 81 ---~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 114 (146)
T d1lkja_ 81 ---SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114 (146)
T ss_dssp ---HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
T ss_conf ---7999999999818899892959999999998087
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=98.82 E-value=1.3e-08 Score=71.26 Aligned_cols=95 Identities=21% Similarity=0.326 Sum_probs=76.3
Q ss_pred HHHHHHHHCCCCCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC---CCHHHHHHHH
Q ss_conf 9999999806289851331004621688-99999999999999539999883319999999999406---8969999999
Q 002711 146 GEVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD---QSFDARLETF 221 (889)
Q Consensus 146 ~~l~~~F~~ld~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~---~~~ee~l~~~ 221 (889)
.++.+.+..++.+|.|+.+||...+++. .......++|.. .|.++ +|.|+.+||..++..+.. ...++.++.+
T Consensus 9 ~~i~~~~~~~~~~~~i~f~eF~~~~~~~~~~~~~~~~~F~~-~D~d~--~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~ 85 (109)
T d1rwya_ 9 EDIKKAIGAFTAADSFDHKKFFQMVGLKKKSADDVKKVFHI-LDKDK--SGFIEEDELGSILKGFSSDARDLSAKETKTL 85 (109)
T ss_dssp HHHHHHHHTTCSTTCCCHHHHHHHHTGGGSCHHHHHHHHHH-HSTTC--SSEECHHHHHTHHHHHCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHC-CCCCC--CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 99999998306689867999999981564899999998524-25799--9818399999999981323444888999999
Q ss_pred HHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 9885689993462999999999
Q 002711 222 FDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 222 F~~fDkd~dG~Is~eEl~~il~ 243 (889)
|+.+|.|+||+|+.+||.++|.
T Consensus 86 ~~~~D~d~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 86 MAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHCCCCCCEEEHHHHHHHHH
T ss_conf 9982999998574999999998
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.82 E-value=3.9e-08 Score=68.13 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=36.0
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 88331999999999940689699999999885689993462999999999642016201368879999999988619999
Q 002711 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHN 273 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~ 273 (889)
+|.|+++||..++...... .....+.+|+.||+|+||.|+.+||...+...... .. .++.+..+|+.+|.|+
T Consensus 33 ~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~--~~-----~~~~~~~~F~~~D~d~ 104 (183)
T d2zfda1 33 DGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPN--AP-----IDDKIHFSFQLYDLKQ 104 (183)
T ss_dssp SSSBCHHHHHHHHHSCSSC-CCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT--SC-----HHHHHHHHHHHHCTTS
T ss_pred CCCCCHHHHHHHHHHCCCC-CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC--CC-----HHHHHHHHHCCCCCCC
T ss_conf 9968599999999855899-98999999999705999857289998788765215--75-----8898887620235478
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 97513999999998
Q 002711 274 LGYIELYNLEMLLL 287 (889)
Q Consensus 274 dG~Is~~EF~~~l~ 287 (889)
+|+|+.+|+..++.
T Consensus 105 ~G~Is~~e~~~~~~ 118 (183)
T d2zfda1 105 QGFIERQEVKQMVV 118 (183)
T ss_dssp SSSEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
T ss_conf 99756999999999
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=98.81 E-value=5.5e-09 Score=73.71 Aligned_cols=65 Identities=22% Similarity=0.360 Sum_probs=55.1
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.++.+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+|.++|.|++|.|+|+||..+|.+
T Consensus 8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~s------~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPT------EAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTT--CCCC------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHC--CCCC------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHC
T ss_conf 9999999998689996571889999999968--9999------999999999958999983839999999824
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.81 E-value=5.7e-10 Score=80.21 Aligned_cols=85 Identities=21% Similarity=0.275 Sum_probs=62.5
Q ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98833199999999994068969999999988568999346299999999964201620136887999999998861999
Q 002711 193 TSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPH 272 (889)
Q Consensus 193 ~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d 272 (889)
.+|.|+.++...+ ..++. ..-..++.+|+.||+|++|+|+.+||+.+++... ..++ ++.+..+|+++|.|
T Consensus 2 ~~g~id~~~~~ma-~~l~~-~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg--~~~s------~~e~~~l~~~~D~d 71 (87)
T d1s6ja_ 2 SSGHIDDDDKHMA-ERLSE-EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVG--SELM------ESEIKDLMDAADID 71 (87)
T ss_dssp CSSSSSSHHHHSS-SSSCS-SSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTT--SSCC------HHHHHHHHHHHCTT
T ss_pred CCCCCCCHHHHHH-HHCCH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC--CCCC------HHHHHHHHHHCCCC
T ss_conf 9986486479998-65999-9999999999998489999382999999999738--9999------99999999982899
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 997513999999998
Q 002711 273 NLGYIELYNLEMLLL 287 (889)
Q Consensus 273 ~dG~Is~~EF~~~l~ 287 (889)
++|+|+|+||..+|.
T Consensus 72 ~~g~I~~~EFl~am~ 86 (87)
T d1s6ja_ 72 KSGTIDYGEFIAATV 86 (87)
T ss_dssp CSSEECHHHHTTCCC
T ss_pred CCCEEEHHHHHHHHC
T ss_conf 998384999999875
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=4.4e-08 Score=67.81 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999999999995399998833199999999994068969999999988568999346299999999964201620136
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKI 254 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~ 254 (889)
+++.+.++..++...|.+++|.|+.+||..+...... +.+..+|+++|.+++|.|+.+||..++.......
T Consensus 11 t~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~----- 81 (165)
T d1auib_ 11 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG----- 81 (165)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTC----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC-----
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC----HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCH-----
T ss_conf 9999999999999887899897959999976602688----8999999997323101244666632100122100-----
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 88799999999886199999751399999999819
Q 002711 255 QERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 255 ~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
...+.+..+|+.+|.|++|+|+.+|+..++...
T Consensus 82 --~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~ 114 (165)
T d1auib_ 82 --DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 114 (165)
T ss_dssp --CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf --257899999987502432223289999999975
|
| >d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Nitrate reductase core domain species: Corn (Zea mays) [TaxId: 4577]
Probab=98.79 E-value=1.2e-08 Score=71.51 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=75.9
Q ss_pred CCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCCCCCCCCEEEEECCCC-CCEEEEEEECCCCHHHHHH
Q ss_conf 0179999999559999999965899---74378638999976779974226063106999-9169999855851278999
Q 002711 576 KSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPGD-DYLSIHIRTLGDWTSQLKS 651 (889)
Q Consensus 576 ~~~~i~~v~~~~~~v~~L~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~~-~~lsl~Ir~~G~wT~~L~~ 651 (889)
..+++++.+.++.++..++|..|.+ +.++||||+.|.++.......++||++|.|.+ +++.++||...+...
T Consensus 3 ~~~klv~~~~it~d~~~~~f~~p~~~~~~~~~~Gq~v~v~~~~~~~~~~R~Ys~~s~~~~~~~~~~~ik~~~~~~~---- 78 (114)
T d2cnda1 3 IHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEH---- 78 (114)
T ss_dssp EEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCCSSCB----
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCC----
T ss_conf 8999999998379959999987993325576635899999603352588641047987799989999984058876----
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 9863069999887663000025689999855799959779998
Q 002711 652 IFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 652 ~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
...++.|..|.++. ++++|+ .|.|.||+|.+.
T Consensus 79 ----~~~~~gG~~s~~l~-~l~~Gd------~v~i~gP~G~F~ 110 (114)
T d2cnda1 79 ----PKFPNGGLMTQYLD-SLPVGS------YIDVKGPLGHVE 110 (114)
T ss_dssp ----TTBTTCCHHHHHHH-HCCTTC------EEEEEEEECSEE
T ss_pred ----CCCCCCCHHHHHHH-HCCCCC------EEEEECCCEEEE
T ss_conf ----53356832478986-289999------999988716358
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.76 E-value=1.4e-07 Score=64.60 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996420162013688
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQE 256 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e 256 (889)
...+++-+++...|.+++|.|+++||..++..++....++.+..++ .+++|.|+.+||..++........
T Consensus 4 ~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~----~~~~~~i~~~eF~~~~~~~~~~~~------ 73 (142)
T d1wdcb_ 4 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFLSIFSDKLSGTD------ 73 (142)
T ss_dssp HHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----TTSSSCCCHHHHHHHHHHHTCSCC------
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH----HHCCCCCCCCCCCCCCCCCCCCCC------
T ss_conf 9999999999997589997398589999998751389899997888----862575011112222210013420------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 7999999998861999997513999999998199
Q 002711 257 RVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 257 ~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 74 -~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 106 (142)
T d1wdcb_ 74 -SEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 106 (142)
T ss_dssp -CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSS
T ss_pred -HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf -344377743001026898654899999999703
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=1.1e-07 Score=65.06 Aligned_cols=122 Identities=10% Similarity=0.041 Sum_probs=93.0
Q ss_pred HHHHHHHHHCCC--CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999998062--898513310046216889999999999999953999988331999999999940689699999999
Q 002711 145 WGEVEKRFDELA--VDGMLPKSSFGQCIGMNESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFF 222 (889)
Q Consensus 145 ~~~l~~~F~~ld--~dG~Is~~ef~~~lg~~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F 222 (889)
...++..+..+| ++|.|+.+||...+... ......|. ..|.+++|.|+.+|+..++..+.....++.++.+|
T Consensus 46 ~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~---~~~~~~f~---~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~ 119 (172)
T d1juoa_ 46 LETCRLMVSMLDRDMSGTMGFNEFKELWAVL---NGWRQHFI---SFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIA 119 (172)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---HHHHHHHH---TTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH---HHHHHHHH---HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998778999846167789998752---55667899---74768999687999999999988730199999999
Q ss_pred HHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHH
Q ss_conf 8856899934629999999996420162013688799999999886199999751--39999999981
Q 002711 223 DMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYI--ELYNLEMLLLQ 288 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~I--s~~EF~~~l~~ 288 (889)
+.+|. +|.|+.+||..++... +.+..+|+.+|+|++|+| +|+||..+++.
T Consensus 120 ~~~d~--~g~i~~~eF~~~~~~~--------------~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l~ 171 (172)
T d1juoa_ 120 KRYST--NGKITFDDYIACCVKL--------------RALTDSFRRRDTAQQGVVNFPYDDFIQCVMS 171 (172)
T ss_dssp HHTCS--SSSEEHHHHHHHHHHH--------------HHHHHHHHHTCTTCCSEEEEEHHHHHHHHTT
T ss_pred HHHHH--CCCCCHHHHHHHHHHH--------------HHHHHHHHHHCCCCCCCEEECHHHHHHHHHC
T ss_conf 99873--5991799999999999--------------9999999986889999688419999999970
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.75 E-value=5.2e-08 Score=67.35 Aligned_cols=111 Identities=12% Similarity=0.150 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-----CCH----------HHHHHHHHHHHCCCCCCEEEHHHHHHH
Q ss_conf 99999999999539999883319999999999406-----896----------999999998856899934629999999
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITD-----QSF----------DARLETFFDMVDKNLDGRITEEEVKEI 241 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-----~~~----------ee~l~~~F~~fDkd~dG~Is~eEl~~i 241 (889)
..+.++|+.+.|.|+ +|.|+++||..++..+.. ... .......+...|.+++|.|+.+|+...
T Consensus 8 ~~i~~~F~~~~D~d~--dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~ 85 (185)
T d2sasa_ 8 QKIKFTFDFFLDMNH--DGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM 85 (185)
T ss_dssp HHHHHHHHHHTCTTC--SSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHCCCC--CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
T ss_conf 999999998616799--796879999999997164457776617899999989999999999847689975753076677
Q ss_pred HHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9964201-62013688799999999886199999751399999999819
Q 002711 242 IALSASA-NKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 242 l~~~~~~-~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
+...... .......+.....+..+|+.+|.|++|+|+.+||..++...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 134 (185)
T d2sasa_ 86 WEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF 134 (185)
T ss_dssp HHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
T ss_conf 7777654444321157889999999998766898667899999999985
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.75 E-value=1.4e-08 Score=71.02 Aligned_cols=61 Identities=13% Similarity=0.273 Sum_probs=51.2
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 999999988568999346299999999964201620136887999999998861999997513999999
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEM 284 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~ 284 (889)
|.++.+|+.||+|++|+|+.+||+.++.... ..++ ++.+..+|+.+|+|++|.|+|+||.+
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g--~~~~------~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLG--EKLT------DAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTT--CCCC------HHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred CHHHHHHHHHCCCCCCEEEHHHHHHHHHHCC--CCCC------HHHHHHHHHHCCCCCCCCEEHHHHCC
T ss_conf 9699999997779997483799999999829--9998------99999999980889899593999509
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.75 E-value=1e-08 Score=72.02 Aligned_cols=70 Identities=20% Similarity=0.284 Sum_probs=53.4
Q ss_pred HHHHHHHHHH-CCCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-68999-3462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+.| |+||+ |+|+.+||++++........... ..++.+..+|+++|.|+||.|+|+||..+|..
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~---~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQ---KDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCS---SCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCCCC---CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999998266899887519999999998652113568---99999999999974999997969999999999
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.71 E-value=1.2e-08 Score=71.58 Aligned_cols=67 Identities=13% Similarity=0.056 Sum_probs=51.8
Q ss_pred HHHHHHHHHH-CCCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-68999-3462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+.| |+||+ |.|+.+||++++.........+ ++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~------~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKD------VGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCC------SSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCCC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999999722589989885999999999855666899------999999999866899996979999999999
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.70 E-value=1.2e-08 Score=71.62 Aligned_cols=100 Identities=18% Similarity=0.295 Sum_probs=75.0
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC---CCC
Q ss_conf 136910099999999806289851331004621688-9999999999999953999988331999999999940---689
Q 002711 138 KNVGTEGWGEVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT---DQS 213 (889)
Q Consensus 138 ~~~~~~~~~~l~~~F~~ld~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~---~~~ 213 (889)
..++.+++ ....+..+.+|.++.++|...+++. .+.....++|.. .|.|+ +|+|+.+||..++..+. ...
T Consensus 4 d~ls~~dI---~~~l~~~~~~~s~~~~~F~~~~~~~~~~~~~l~~~F~~-~D~d~--~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 4 DILSAEDI---AAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRF-IDNDQ--SGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GTSCHHHH---HHHHHHTCSTTCCCHHHHHHHHSGGGSCHHHHHHHHHH-HCTTC--SSEECTHHHHTGGGGTCTTSCCC
T ss_pred HHCCHHHH---HHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH-HCCCC--CCEECHHHHHHHHHHHHHCCCCC
T ss_conf 14789999---99998536689806999999982676999999999862-55799--98383999999999977546789
Q ss_pred HHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 699999999885689993462999999999
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 214 ~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
.++.++.+|+.+|+|+||.|+.+||..+|.
T Consensus 78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCEEEHHHHHHHHC
T ss_conf 899999999985899998573999999973
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=4.9e-08 Score=67.49 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=68.5
Q ss_pred HHHHHHCCC---CCCCCCHHHHCCCCCC---C-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC---------C
Q ss_conf 999998062---8985133100462168---8-9999999999999953999988331999999999940---------6
Q 002711 148 VEKRFDELA---VDGMLPKSSFGQCIGM---N-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQIT---------D 211 (889)
Q Consensus 148 l~~~F~~ld---~dG~Is~~ef~~~lg~---~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~---------~ 211 (889)
..+.|+.+| +||.|+.+||..++.. . ..++.+..+|.. .|.|+ +|.|+.+|+..++..+. +
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~-~D~d~--~G~I~~~el~~~l~~~~~~~~~~~~~~ 135 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRI-FDFDD--DGTLNREDLSRLVNCLTGEGEDTRLSA 135 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHH-HCTTC--SSSBCHHHHHHHHHHHC------CCCC
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC-CCCCC--CCEEEHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 999988506778999086999999999985259888999986016-15799--974419999999999871425664559
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 89699999999885689993462999999999
Q 002711 212 QSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
...++.+..+|+.+|.|+||+|+.+||++++.
T Consensus 136 ~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~ 167 (180)
T d1xo5a_ 136 SEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167 (180)
T ss_dssp TTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999995899989191999999999
|
| >d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=98.68 E-value=5.7e-08 Score=67.05 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=75.6
Q ss_pred CCEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCC----CCCCCCCEEEEECCCC-----CCEEEEEEE
Q ss_conf 017999999955-----99999999658997437863899997677----9974226063106999-----916999985
Q 002711 576 KSVRILKVAVYP-----GNVLALQMSKPQGFKYTSGQYIFVNCAAV----SQFQWHPFSITSAPGD-----DYLSIHIRT 641 (889)
Q Consensus 576 ~~~~i~~v~~~~-----~~v~~L~~~~p~~~~~~pGQyv~l~~p~i----s~~e~HPFSIaS~p~~-----~~lsl~Ir~ 641 (889)
+..+|+.+..+. .++..|.+..+..+.|+||||+-|..|.. .+..++.|||+|+|.. ..+++.||.
T Consensus 20 ~~a~V~~~~~lt~~~~~~~t~~i~~~~~~~~~y~pGQ~v~v~~p~~~~~~~~~~~R~YSIaSsP~~~~~~~~~l~~~Vk~ 99 (136)
T d1fnda1 20 YVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKR 99 (136)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCTTCTTSSSCEEEEEEEC
T ss_pred EEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf 28789868993589987259997665688886117889998788864456655057765256875777887579999987
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 585127899998630699998876630000256899998557999597799
Q 002711 642 LGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGA 692 (889)
Q Consensus 642 ~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~ 692 (889)
.-..+.. ...+.|.+|++|. ++++|+ +|.|.||||.
T Consensus 100 ~~~~~~~--------~~~~~G~~S~~L~-dLk~GD------~V~v~GP~Gk 135 (136)
T d1fnda1 100 LIYTNDA--------GETIKGVCSNFLC-DLKPGA------EVKLTGPVGK 135 (136)
T ss_dssp CEEECTT--------SCEEECHHHHHHH-TCCTTC------EEEEEEEECS
T ss_pred EECCCCC--------CCCCCCEEEHHHC-CCCCCC------EEEEECCCCC
T ss_conf 6415677--------7688935714323-598969------9988388789
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.68 E-value=2.5e-08 Score=69.36 Aligned_cols=94 Identities=22% Similarity=0.296 Sum_probs=74.0
Q ss_pred HHHHHHHCCCCCCCCCHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC---CCHHHHHHHHH
Q ss_conf 999999806289851331004621688-99999999999999539999883319999999999406---89699999999
Q 002711 147 EVEKRFDELAVDGMLPKSSFGQCIGMN-ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD---QSFDARLETFF 222 (889)
Q Consensus 147 ~l~~~F~~ld~dG~Is~~ef~~~lg~~-~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~---~~~ee~l~~~F 222 (889)
++...++..+.+|.|+..||...+++. .+.....++|+.+ |.++ +|+|+.+||..++..+.. ...++.++.+|
T Consensus 9 di~~~~~~~~~~gsi~~~eF~~~~~l~~~~~~~l~~~F~~~-D~d~--~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~ 85 (107)
T d2pvba_ 9 DVAAALAACSAADSFKHKEFFAKVGLASKSLDDVKKAFYVI-DQDK--SGFIEEDELKLFLQNFSPSARALTDAETKAFL 85 (107)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-CTTC--SSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH-CCCC--CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999971567898379999999842659999999998766-4699--99584999999999840124459999999999
Q ss_pred HHHCCCCCCEEEHHHHHHHHH
Q ss_conf 885689993462999999999
Q 002711 223 DMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 223 ~~fDkd~dG~Is~eEl~~il~ 243 (889)
+.+|+|+||.|+.+||..+|+
T Consensus 86 ~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 86 ADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHCCCCCCCEEHHHHHHHHC
T ss_conf 981899999595999999972
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.68 E-value=8.1e-08 Score=66.07 Aligned_cols=105 Identities=10% Similarity=0.014 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
..++|..+|..+ +++|.|+.+||..++..++....++.++.+ ...|.+++|.|+.+||..++..........
T Consensus 9 l~~~F~~fD~~~-~~dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~------ 80 (152)
T d1wdcc_ 9 LKDVFELFDFWD-GRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGT------ 80 (152)
T ss_dssp HHHHHHHHHHHT-CSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCC------
T ss_pred HHHHHHHHCCCC-CCCCEECHHHHHHHHHHHCCCCCHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCHHH------
T ss_conf 999999977279-999759999999999984249527666455-442014556511011011120011110147------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 999999988619999975139999999981998
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAPS 291 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p~ 291 (889)
.+.+..+|+.+|.|++|+|+.+||..+|.....
T Consensus 81 ~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~ 113 (152)
T d1wdcc_ 81 FADYMEAFKTFDREGQGFISGAELRHVLTALGE 113 (152)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 775202321033356763318999999998189
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.68 E-value=2e-08 Score=69.99 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=53.9
Q ss_pred HHHHHHHHHH-CCCCCC-EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-689993-462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~dG-~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+...|+.| |+|||| .|+++||+++++...... +.. ...++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~-~~~--~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATW-TPT--EFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTC-CCC--TTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCC-CCC--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999999837589989687999999999864402-456--899999999999975799997969999999999
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.68 E-value=2.7e-08 Score=69.22 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=52.9
Q ss_pred HHHHHHHHHH-CCCCCC-EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-689993-462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~dG-~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+.| |+||+| .|+.+||++++....... +.. ...++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~-~~~--~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSF-LGK--RTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHH-HTT--CCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCHHC-CCC--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999998856789989667999999999744210-356--899999999999982799997979999999999
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=2.5e-08 Score=69.46 Aligned_cols=63 Identities=24% Similarity=0.340 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
.++.+.+|+.+|+|++|+|+.+|++.++..+ +++ ++.++.|++.+|.|+||+|+++||..+|.
T Consensus 9 ~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~----~l~------~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKT----GLP------STLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTT----TCC------HHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC----CCC------HHHHHHHHHHHCCCCCCEECHHHHHHHHH
T ss_conf 9999999998789999987087777788732----799------99999999980789998171999999999
|
| >d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: cytochrome b5 reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=4.7e-08 Score=67.59 Aligned_cols=106 Identities=13% Similarity=0.216 Sum_probs=77.0
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCCCCCCCCEEEEECCC-CCCEEEEEEECCCCHHHH
Q ss_conf 120179999999559999999965899---7437863899997677997422606310699-991699998558512789
Q 002711 574 GYKSVRILKVAVYPGNVLALQMSKPQG---FKYTSGQYIFVNCAAVSQFQWHPFSITSAPG-DDYLSIHIRTLGDWTSQL 649 (889)
Q Consensus 574 ~~~~~~i~~v~~~~~~v~~L~~~~p~~---~~~~pGQyv~l~~p~is~~e~HPFSIaS~p~-~~~lsl~Ir~~G~wT~~L 649 (889)
.++++++++++.+++++..++|..|.+ +.+.||||+.+.++.......++||++|.|. ++++.+.||..-.-..
T Consensus 11 ~~~~~~v~~~~~it~d~~~f~f~~p~~~~~~~~~~Gq~v~v~~~~~~~~~~R~Ys~~s~~~~~g~~~~~vk~~~~~~~-- 88 (124)
T d1umka1 11 IKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTH-- 88 (124)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTTCCSEEEEEEECCCSSSB--
T ss_pred CCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCC--
T ss_conf 678889999999279929999984883654333233699997314640477720247865688569999984214566--
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 999863069999887663000025689999855799959779998
Q 002711 650 KSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 650 ~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
-..+.|+.+..+..++++|+ .|.|.||+|.+.
T Consensus 89 -------~~~~~Gg~~s~~l~~l~~GD------~v~v~gP~G~F~ 120 (124)
T d1umka1 89 -------PKFPAGGKMSQYLESMQIGD------TIEFRGPSGLLV 120 (124)
T ss_dssp -------TTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEE
T ss_pred -------CCCCCCCCHHHHHHCCCCCC------EEEEECCEEEEE
T ss_conf -------30278965189883699999------999978806368
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.65 E-value=1.7e-07 Score=63.90 Aligned_cols=111 Identities=20% Similarity=0.243 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHH
Q ss_conf 999999999999539999-8833199999999994068969999999988568999346299999999964201620136
Q 002711 176 KDFASELFDALARRRGLT-SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKI 254 (889)
Q Consensus 176 ~~~~~~lf~~l~~~d~~~-~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~ 254 (889)
+...+++-+++...|.++ +|.|+.+||..++..++....++.+..++..+|.+++|.|+.+++...+..........
T Consensus 10 ~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 87 (156)
T d1dtla_ 10 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG-- 87 (156)
T ss_dssp HHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC--
T ss_conf 999999999999983789998597799999999828877789999988876126888503002334442011101111--
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 887999999998861999997513999999998199
Q 002711 255 QERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 255 ~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 88 --~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~ 121 (156)
T d1dtla_ 88 --KSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121 (156)
T ss_dssp --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred --CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf --2799999999976868998680999999986127
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.65 E-value=1e-08 Score=71.93 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
-+.+..+|+.||.| ||+|+.+||++++....... +.. ...++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~-~~~--~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGF-LEN--QKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHH-HHH--SCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-CCEECHHHHHHHHHHHCCCC-CCC--CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999987699-99773999999999856533-433--278999999999981799998959999999999
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.64 E-value=5e-07 Score=60.85 Aligned_cols=106 Identities=13% Similarity=0.097 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC---C--CHHHH----HHHHHHH--HCCCCCCEEEHHHHHHHHHHHHH
Q ss_conf 999999999539999883319999999999406---8--96999----9999988--56899934629999999996420
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITD---Q--SFDAR----LETFFDM--VDKNLDGRITEEEVKEIIALSAS 247 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~---~--~~ee~----l~~~F~~--fDkd~dG~Is~eEl~~il~~~~~ 247 (889)
..++|. ..|.|++|.|+++||..++..+.. . ..... ....+.. .|.+++|.|+.+|+...+.....
T Consensus 8 l~~~F~---~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 8 MKTYFN---RIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHH---HHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHH---HHCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 999999---98669889680999999999971125621677777677654201110203689984759999999986411
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 1620136887999999998861999997513999999998199
Q 002711 248 ANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 248 ~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.... .+...+.+..+|+.+|.|+||+|+.+||..++....
T Consensus 85 ~~~~---~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 124 (174)
T d2scpa_ 85 NPEA---KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG 124 (174)
T ss_dssp CGGG---THHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT
T ss_pred CHHH---HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 0126---777899999999987777655687999999999975
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.64 E-value=1.3e-08 Score=71.19 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHCC-C-CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8969999999988568-9-993462999999999642016201368879999999988619999975139999999981
Q 002711 212 QSFDARLETFFDMVDK-N-LDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 212 ~~~ee~l~~~F~~fDk-d-~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
....+.++.+|+.||. | ++|.|+.+||++++.........+ ++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 3 e~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~------~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKG------PRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp SCCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSS------CCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCCCCC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 2639999999998842789999787999999999876888999------999999999975899980969999999999
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.62 E-value=3.9e-07 Score=61.55 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=65.0
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-----C-CH---------HHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999539999883319999999999406-----8-96---------999999998856899934629999999996
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITD-----Q-SF---------DARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-----~-~~---------ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
+++-.++...|.+++|.|+++||..++..+.. . .. .......+...|.+++|.|+..++...+..
T Consensus 7 ~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 86 (176)
T d1nyaa_ 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTEN 86 (176)
T ss_dssp HHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999986998796849999999999998727764189999999999889999998746789985447888878765
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 4201620136887999999998861999997513999999998199
Q 002711 245 SASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 245 ~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
...........+...+.+..+|..+|.|++|+|+.+||..++...+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~ 132 (176)
T d1nyaa_ 87 LIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG 132 (176)
T ss_dssp HHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 4222212226777899999999988127982345999999998238
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.62 E-value=2.4e-08 Score=69.53 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
..++|+.+ |.+++|.|+++||..++..+.....++.++.+|+.+|.+++|.|+.+|+............
T Consensus 12 l~~~F~~~---D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~-------- 80 (182)
T d1s6ia_ 12 LKELFKMI---DTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER-------- 80 (182)
T ss_dssp HHHHHHTT---SSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC--------
T ss_pred HHHHHHHH---CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC--------
T ss_conf 99999998---1899597989999999997287632221002455541011123027899988875102165--------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9999999886199999751399999999819
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQA 289 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~ 289 (889)
++.+..+|..+|.|++|+|+.+||..++...
T Consensus 81 ~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~ 111 (182)
T d1s6ia_ 81 EENLVSAFSYFDKDGSGYITLDEIQQACKDF 111 (182)
T ss_dssp CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
T ss_conf 9999999999863489860156664126531
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=8.9e-08 Score=65.78 Aligned_cols=64 Identities=16% Similarity=0.179 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 999999998856899934629999999996420162013688799999999886199999751399999999
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLL 286 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l 286 (889)
...++.+|+.||+|++|+|+.+||+.++.... ..++ ++.++.++..+|.|++|.|+|.||...+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~--~~l~------~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRV--QILT------DEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT--CCCC------HHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCEECHHHHHHHHHHHC--CCCC------HHHHHHHHHCCCCCCCCCEEHHHHHHHH
T ss_conf 99999999998789995277248899999929--9987------5678887530246999939499999972
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.56 E-value=1.1e-07 Score=65.15 Aligned_cols=64 Identities=22% Similarity=0.163 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999885689993462999999999642016201368879999999988619999975139999999981
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+.+|+.+|+|++|+|+.+|++.++..+ +++ ++.+..|++.+|.|+||+|+++||..+|.-
T Consensus 8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~----~l~------~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS----KLP------ILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH----SSC------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC----CCC------HHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf 9999999998599866323578888889871----699------999999999857899981619999999999
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.55 E-value=1.9e-07 Score=63.57 Aligned_cols=100 Identities=14% Similarity=0.190 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
.++.|.. .|.++ +|.|+.+||..++..++....++.+. .+|.+++|.|+.+|+..++....... ....
T Consensus 7 fke~F~~-~D~d~--dG~I~~~el~~~l~~lg~~~t~~ei~----~~~~~~~~~i~~~eF~~~~~~~~~~~-~~~~---- 74 (140)
T d1ggwa_ 7 YKQAFSL-FDRHG--TGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDMEQFLQVLNRPNGFD-MPGD---- 74 (140)
T ss_dssp THHHHHH-TCSSS--SSEECHHHHHHHHHHTSCCCCHHHHH----HHHTTSCSSEEHHHHHHHHCTTSSSS-SSCC----
T ss_pred HHHHHHH-HCCCC--CCEECHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCHHHHHHHHHHHHCC-HHHH----
T ss_conf 9999999-77899--98197999999999987416887400----00002222344012322122321000-0337----
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99999998861999997513999999998199
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 106 (140)
T d1ggwa_ 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLG 106 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 99999999987116887253999999998818
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.55 E-value=3.5e-08 Score=68.48 Aligned_cols=74 Identities=19% Similarity=0.226 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHCC--CCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 69999999988568--9993462999999999642016201368879999999988619999975139999999981
Q 002711 214 FDARLETFFDMVDK--NLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 214 ~ee~l~~~F~~fDk--d~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.++.+..+|++|++ ++||.|+.+||+++++...... ....+...++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 5 ~E~~i~~l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~-~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 5 AERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNF-LSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHH-HHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 89999999999999769999466999999999876421-12346699999999999865899993969999999999
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.54 E-value=7.9e-08 Score=66.13 Aligned_cols=68 Identities=19% Similarity=0.211 Sum_probs=53.0
Q ss_pred HHHHHHHHHH-CCCCCC-EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-689993-462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~dG-~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+.| |+|||| .|+..||++++..... ...... ++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~-~~~~~~----~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELT-IGSKLQ----DAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSC-CGGGTT----SHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHH-HHCCCC----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999997466899784369999999999887-542387----999999999866999997969999999999
|
| >d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]
Probab=98.51 E-value=4e-07 Score=61.51 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=74.8
Q ss_pred CCEEEEEEEEEC-----CCEEEEEEECCC-CCCCCCCCEEEEEECCC----CCCCCCCEEEEECCCC-----CCEEEEEE
Q ss_conf 017999999955-----999999996589-97437863899997677----9974226063106999-----91699998
Q 002711 576 KSVRILKVAVYP-----GNVLALQMSKPQ-GFKYTSGQYIFVNCAAV----SQFQWHPFSITSAPGD-----DYLSIHIR 640 (889)
Q Consensus 576 ~~~~i~~v~~~~-----~~v~~L~~~~p~-~~~~~pGQyv~l~~p~i----s~~e~HPFSIaS~p~~-----~~lsl~Ir 640 (889)
+..+++++..+. .++.++.+..+. .+.|.||||+-|..|.. .....+.|||+|+|.+ +.+++.||
T Consensus 13 ~~a~V~~~~~lt~~~~~~~v~~i~~~~~~~~~~y~pGQ~v~v~~p~~~~~~~~~~~R~YSias~p~~~~~~~~~~~~~Vk 92 (133)
T d2bmwa1 13 FIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVR 92 (133)
T ss_dssp EEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 68899878990378987429999971588637755998999984266656654410555404787677887657999998
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 558512789999863069999887663000025689999855799959779998
Q 002711 641 TLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 641 ~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
..-.++... -..+.|-.|++|. ++++|+ +|.+.||||.+.
T Consensus 93 ~~~~~~~~~-------~~~~~G~~S~yL~-~lk~GD------~v~v~GP~G~~f 132 (133)
T d2bmwa1 93 QLEYKHPES-------GETVYGVCSTYLT-HIEPGS------EVKITGPVGKEM 132 (133)
T ss_dssp CCEECSSSS-------SSCEECHHHHHHH-TCCTTC------EEEEEEEECSSS
T ss_pred ECCCCCCCC-------CCCCCCEEHHHHH-HCCCCC------EEEEECCCCCEE
T ss_conf 545566556-------7777728226475-289989------999957765635
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.46 E-value=6.8e-07 Score=60.00 Aligned_cols=98 Identities=20% Similarity=0.195 Sum_probs=56.5
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99999999539999883319999999999406896999999998856899934629999999996420162013688799
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVE 259 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~ 259 (889)
.++|..+ |.+++|.|+.+||..++..++...+.+. .++.++.+++|.|+.+|+..++....... . .+
T Consensus 10 ~e~F~~~---D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~-~------~~ 76 (145)
T d2mysb_ 10 KEAFTVI---DQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGA-D------PE 76 (145)
T ss_pred HHHHHHH---CCCCCCCCCHHHHHHHHHHHCCCCCHHH---HHHHHHHHCCCCEEECHHHHHHHHCCCCC-C------HH
T ss_conf 9999997---7898798989999999999189720589---99999874068610012343320002221-2------27
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 9999998861999997513999999998199
Q 002711 260 EYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 260 e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
+.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g 107 (145)
T d2mysb_ 77 DVIMGAFKVLDPDGKGSIKKSFLEELLTTGG 107 (145)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 7999998724313550020799999999808
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.45 E-value=6.5e-07 Score=60.12 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=26.6
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
Q ss_conf 8833199999999994068969999999988568999346299999999
Q 002711 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il 242 (889)
+|.|+.+||..++..++....++.++.+|+.+|.|+||+|+.+||..++
T Consensus 121 ~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~ 169 (189)
T d1qv0a_ 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 169 (189)
T ss_dssp -CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHH
T ss_conf 9710020147788861799999999999998389999959299999999
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.45 E-value=2.1e-07 Score=63.30 Aligned_cols=106 Identities=13% Similarity=0.248 Sum_probs=72.7
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH-HHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999539999883319999999999406896999999998-85689993462999999999642016201368879
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFD-MVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~-~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
.++|..+ |.++ +|.|+.+||..++..++....++.++.++. ..+.+.+|.|+.+||..++...... ........
T Consensus 5 k~~F~~~-D~d~--~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~--~~~~~~~~ 79 (146)
T d1m45a_ 5 KDIFTLF-DKKG--QGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKE--LDATTKAK 79 (146)
T ss_dssp TTCHHHH-CTTC--CSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHH--HHGGGCCC
T ss_pred HHHHHHH-CCCC--CCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC--CCCCCCCH
T ss_conf 9999998-1899--69799999999999849960278876442013343222211100022101111011--11112204
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99999998861999997513999999998199
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 80 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g 111 (146)
T d1m45a_ 80 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 111 (146)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHHST
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
T ss_conf 77899988740114565412464644300148
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.1e-07 Score=65.11 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 969999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 213 SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 213 ~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
...++.+.+|+.+|+|++|+|+.+|++.++.. .+++ ++.++.|++.+|.|+||+|+++||..+|.
T Consensus 19 ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~----s~L~------~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTK----SKLS------IPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS----SSCS------SCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----HCCC------HHHHHHHHHHHCCCCCCEECHHHHHHHHH
T ss_conf 99999999999849876644018899999975----2122------08899999983569998297999999999
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=4.2e-07 Score=61.38 Aligned_cols=62 Identities=18% Similarity=0.353 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
..+.+.+|+.+| |+||+|+.+|++.++.. .+++ .+.++.|++.+|.|+||+|+++||..+|.
T Consensus 9 ~~~y~~~F~~~D-~~~G~i~~~el~~~l~~----~gl~------~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 9 KAKYDAIFDSLS-PVNGFLSGDKVKPVLLN----SKLP------VDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHHTC-CBTTEEEHHHHHHHHTT----SSCC------HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCCEEHHHHHHHHHH----CCCC------HHHHHHHHHHHCCCCCCEECHHHHHHHHH
T ss_conf 999999999818-99993638889999998----2979------99999999986679998385999999999
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.43 E-value=1.5e-07 Score=64.37 Aligned_cols=66 Identities=11% Similarity=0.200 Sum_probs=50.9
Q ss_pred HHHHHHHHHH-CCCCCCEE-EHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-68999346-2999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLDGRI-TEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~dG~I-s~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+..+|+.| |+||+|.+ +.+||+.++..... ..++ ++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~-~~~~------~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESP-QYIR------KKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSC-HHHH------TTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC-CCCC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999998155799771589999999998658-8666------699999999867899996959999999999
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=1.3e-07 Score=64.77 Aligned_cols=104 Identities=14% Similarity=0.072 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC--CCCCCEEEHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 999999999539999883319999999999406896999999998856--899934629999999996420162013688
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVD--KNLDGRITEEEVKEIIALSASANKLSKIQE 256 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fD--kd~dG~Is~eEl~~il~~~~~~~~l~~~~e 256 (889)
..+.|.. .|.++ +|.|+.+||..++..++...+++.+..++..+| .+++|.|+.+|+..++..........
T Consensus 2 ~ke~F~~-~D~d~--~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~---- 74 (139)
T d1w7jb1 2 FKEAFEL-FDRVG--DGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG---- 74 (139)
T ss_dssp HHHHHHH-HCCSS--SSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---------
T ss_pred HHHHHHH-HHCCC--CCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCC----
T ss_conf 8999999-80899--8849899999999984469999999999987730314478331100001457664101003----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 7999999998861999997513999999998199
Q 002711 257 RVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 257 ~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
..+.+..+|+.+|.|++|+|+.+||..++.+..
T Consensus 75 -~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 107 (139)
T d1w7jb1 75 -TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLG 107 (139)
T ss_dssp ----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSS
T ss_pred -HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHC
T ss_conf -799999863402579998482999999999808
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.38 E-value=7.8e-07 Score=59.58 Aligned_cols=70 Identities=11% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHHHHHH-CCCCCC-EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-689993-462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLDG-RITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~dG-~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+...|..| ++||++ .|+++||+++++...... +.... .++.++.+|+++|.|+||.|+|+||..++..
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~-~~~~~--~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANT-IKNIK--DKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTT-STTTT--SHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHCCCC-CCCCC--CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999998745689978686999999999872212-46789--9999999999875799986979999999999
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.35 E-value=3.5e-07 Score=61.91 Aligned_cols=62 Identities=15% Similarity=0.215 Sum_probs=52.5
Q ss_pred HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 999999988568999346299999999964201620136887999999998861999997513999999998
Q 002711 216 ARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLL 287 (889)
Q Consensus 216 e~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~ 287 (889)
+.-+.+|+.+|+|++|+|+.+|++++++. .+++ ++.+..|++.+|.|+||.|+++||..+|.
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~----s~L~------~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKK----SGLP------DLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHT----SSSC------HHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH----CCCC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 89999999878787774559999999998----2885------99999999987579997128999999999
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.31 E-value=1e-06 Score=58.89 Aligned_cols=62 Identities=16% Similarity=0.333 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
++++|+.+ |.++ +|+|+.+||..++..++....++.++.+|+.+|.|+||.|+.+||..++.
T Consensus 3 ~r~~F~~~-D~d~--~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 3 AKRVFEKF-DKNK--DGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp HHHHHHHH-CTTS--SSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHH-CCCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
T ss_conf 99999998-7998--39286999999999743365548999999985799889381999999999
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.30 E-value=5.3e-07 Score=60.69 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999642016201368879
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERV 258 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~ 258 (889)
...+-+++...|.+++|.|+++||..++..+.....++.++.+|+.+|.|++|.|+..||...+.....
T Consensus 121 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~----------- 189 (321)
T d1ij5a_ 121 TNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA----------- 189 (321)
T ss_dssp HHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHT-----------
T ss_pred HHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-----------
T ss_conf 999999999976999890839999999998188665999999999985337853231111001112334-----------
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99999998861999997513999999998199
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
+...|..+|.|++|.|+..++...+....
T Consensus 190 ---~~~~F~~~d~d~~~~i~~~~~~~~~~~~~ 218 (321)
T d1ij5a_ 190 ---LVADFRKIDTNSNGTLSRKEFREHFVRLG 218 (321)
T ss_dssp ---SCCCHHHHCTTCCSEECHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHHCCCCCCHHHHHHHHHHCCC
T ss_conf ---46888887511553102577765300111
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.29 E-value=1.6e-06 Score=57.64 Aligned_cols=69 Identities=22% Similarity=0.330 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 899999999999999539999883319999999999406896999999998856899934629999999996
Q 002711 173 NESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 173 ~~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
.++++...++|..+ |.++ +|.|+.+||..++..++....++.++.+|+.+|.|+||.|+.+||..+|+.
T Consensus 5 ~d~~e~l~~~F~~~-D~d~--~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 5 RDSREEILKAFRLF-DDDN--SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp SSHHHHHHHHHHHH-CTTC--SSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-CCCC--CCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
T ss_conf 56799999999998-4997--987446999999999489999999999999858998893919999999970
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.25 E-value=4.3e-06 Score=54.71 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=21.5
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
Q ss_conf 833199999999994068969999999988568999346299999999
Q 002711 195 SSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 195 G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il 242 (889)
|.|+.+||..++..++....++.+..+|+.+|.|+||+|+.+||.+.+
T Consensus 120 G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~ 167 (187)
T d1uhka1 120 GAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQH 167 (187)
T ss_dssp SEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHH
T ss_conf 053127789999981897638999999998578999979499999999
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.22 E-value=5.1e-06 Score=54.27 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999999
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
..++-++|...|.+++|.|+.+||..++..++....++.++.+|..+|.|+||.|+.+||..+|.
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
T ss_conf 99999999998289998572368899999808999989999999985799998682999999999
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=98.21 E-value=4.4e-06 Score=54.66 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999999539999883319999999999406896999999998856899934629999999996
Q 002711 178 FASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 178 ~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
..+++|.. . |.+++|.|+.+||..++..++. ..++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 7 e~~~~F~~-~--D~d~~G~I~~~El~~~l~~lg~-~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 7 DRERIFKR-F--DTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHH-H--CTTCSSEEEHHHHHHHHHTTTT-CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHH-H--CCCCCCCCCHHHHHHHHHHHHC-CCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
T ss_conf 99999999-8--7898997859999999998643-88999999999857999982829999999997
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.17 E-value=3.9e-06 Score=55.03 Aligned_cols=67 Identities=21% Similarity=0.333 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 9999999999999953999988331999999999940689699999999885689993462999999999
Q 002711 174 ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 174 ~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
.+++...++|..+ |.++ +|+|+.+||..++..++....++.++.+|+.+|.|+||+|+.+||..+|.
T Consensus 6 ~~eeel~~~F~~f-D~~~--~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~ 72 (75)
T d1jc2a_ 6 KSEEELANCFRIF-DKNA--DGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 72 (75)
T ss_dssp CCHHHHHHHHHHH-CCST--TSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-CCCC--CCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
T ss_conf 9599999999998-3898--59283999988998648776499999999984889998084999999998
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=98.17 E-value=4.8e-06 Score=54.40 Aligned_cols=66 Identities=21% Similarity=0.248 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 999999999953999988331999999999940689699999999885689993462999999999
Q 002711 178 FASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 178 ~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
...++-+++...|.+++|.|+.+||..++..++....++.++.+|+.+|.|++|.|+.+||..+|.
T Consensus 6 ei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 6 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp HHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
T ss_conf 999999999998689996571889999999968999999999999995899998383999999982
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.16 E-value=6.8e-06 Score=53.41 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999999953999988331999999999940689699999999885689993462999999999
Q 002711 176 KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 176 ~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
++...++-++|...|.+++|+|+.+|+..++..++....++.++.+|+.+|.|++|.|+.+||..++.
T Consensus 6 ~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp HHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
T ss_conf 99999999999988589997587479999999808999989999999985899998482999999999
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.12 E-value=2.4e-06 Score=56.45 Aligned_cols=63 Identities=21% Similarity=0.359 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
Q ss_conf 999999999995399998833199999999994068969999999988568999346299999999
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il 242 (889)
+...++|.. .|.++ +|+|+.+||..++..++....++.++.+|+.+|.|+||+|+.+||.++|
T Consensus 3 eel~~aF~~-fD~d~--~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRV-FDKDG--NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHH-HCTTC--SSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHH-HCCCC--CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHC
T ss_conf 999999999-86799--9967799999999995899989999999998198999969399999879
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=98.11 E-value=4.1e-06 Score=54.85 Aligned_cols=66 Identities=24% Similarity=0.333 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 999999999999953999988331999999999940689699999999885689993462999999999
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
+++...++|.. .|.++ +|+|+.+||..++..++....++.++.+|..+|.|+||+|+.+||..+++
T Consensus 13 ~ee~l~~~F~~-~D~d~--~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 13 TEEELSDLFRM-FDKNA--DGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp CHHHHHHHHHH-HCSSC--SSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred CHHHHHHHHHH-HCCCC--CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
T ss_conf 79999999999-86899--99243899998888417887799999999997899899490999999998
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.05 E-value=7.2e-06 Score=53.26 Aligned_cols=70 Identities=24% Similarity=0.315 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC--HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999999999953999988331999999999940689--6999999998856899934629999999996
Q 002711 174 ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQS--FDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 174 ~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~--~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
.+++...++|+.++..+++ +|+|+.+||..++..++... .++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 2 ~s~eel~~~F~~fd~~~~~-~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 2 KSPEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CCHHHHHHHHHHHHTSSSC-TTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCC-CCEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 3999999999987645899-99998999999999848867988999999999723279980969999999998
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.05 E-value=1.5e-05 Score=51.20 Aligned_cols=65 Identities=17% Similarity=0.284 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 999999999539999883319999999999-----406896999999998856899934629999999996
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-----~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
+.++|..+++.|++ +|+|+++||..++.. ......++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 11 l~~~F~~ya~~dg~-~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 11 MVSTFHKYSGKEGD-KFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHTSSSS-TTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-CCEECHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999988567899-89667999999999744210356899999999999982799997979999999999
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.04 E-value=1.5e-05 Score=51.14 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 88331999999999940689699999999885689993462999999999
Q 002711 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
+|.|+..|+..++..++....++.++.+|+.+|.|+||.|+.+||..++.
T Consensus 30 ~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 30 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 79 (82)
T ss_dssp TSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred CCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
T ss_conf 98671899999998728999889999999994789997473999999998
|
| >d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin synthase domain-like family: Ferredoxin reductase FAD-binding domain-like domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain species: Maize (Zea mays), root isoform [TaxId: 4577]
Probab=97.99 E-value=9.5e-06 Score=52.46 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=77.1
Q ss_pred CCEEEEEEEEECC-----CEEEEEEECCCCCCCCCCCEEEEEECCC------CCCCCCCEEEEECCCC-----CCEEEEE
Q ss_conf 0179999999559-----9999999658997437863899997677------9974226063106999-----9169999
Q 002711 576 KSVRILKVAVYPG-----NVLALQMSKPQGFKYTSGQYIFVNCAAV------SQFQWHPFSITSAPGD-----DYLSIHI 639 (889)
Q Consensus 576 ~~~~i~~v~~~~~-----~v~~L~~~~p~~~~~~pGQyv~l~~p~i------s~~e~HPFSIaS~p~~-----~~lsl~I 639 (889)
+..+|+.+..+.+ ++..+.+..+.++.|.||||+-|..|.. .+..-+-|||+|+|.. ..+.+.|
T Consensus 29 ~~a~v~~n~~Lt~~~s~k~t~hie~dl~~~~~y~~Gq~lgI~p~~~~~~~~~~p~~~R~YSIaSSp~~~~~~~~~~~~~V 108 (157)
T d1jb9a1 29 FTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCV 108 (157)
T ss_dssp EEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEE
T ss_conf 58898868883469988349998852788763714866788767862001476677677974689857799877899999
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 8558512789999863069999887663000025689999855799959779998
Q 002711 640 RTLGDWTSQLKSIFAKVCQPPSVDQSGLLRADIGQADNRPRIPKLLIDGPYGAPA 694 (889)
Q Consensus 640 r~~G~wT~~L~~~~~~~~~~~~~~~s~~l~~~~~~g~~~~~~~~v~IdGPyG~~~ 694 (889)
|...-++..-. ..-..+.|.+|++|. ++++|+ .|.|-||+|...
T Consensus 109 ~~v~~~~~~~~----~~~r~~~GvcS~yL~-~lk~Gd------~V~i~gp~g~~F 152 (157)
T d1jb9a1 109 RRAVYYDPETG----KEDPSKNGVCSNFLC-NSKPGD------KIQLTGPSGKIM 152 (157)
T ss_dssp ECCCCBCTTTC----CBCGGGSCHHHHHHH-TCCTTC------EEEEEEEECSTT
T ss_pred EEEECCCCCCC----CCCCCCCCEEEHHHC-CCCCCC------EEEEEECCCCCC
T ss_conf 99512566433----478646846616540-599969------989982389832
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=4.1e-07 Score=61.45 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHH
Q ss_conf 999999999995399998833199999999994068--969999999988568999346299999999964201620136
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQ--SFDARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKI 254 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~--~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~ 254 (889)
.+.++++.-+ ..|.|++|.|+.+|+..++...... ...+.+...|...|.+++|.|+.+||...+.....
T Consensus 5 ~~l~k~~~k~-~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~------- 76 (170)
T d2zkmx1 5 TFLDKILVKL-KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP------- 76 (170)
T ss_dssp HHHHHHHHHH-HHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-------
T ss_pred HHHHHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC-------
T ss_conf 8999999999-12118999793999999998831137899999860403566668786479999999864687-------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 887999999998861999997513999999998199
Q 002711 255 QERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 255 ~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
.+.+..+|.++|.|++|+|+.+||...|.+.-
T Consensus 77 ----r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q 108 (170)
T d2zkmx1 77 ----RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQ 108 (170)
T ss_dssp ----CHHHHTTCC--------CCCHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf ----79999999998479988463999999999884
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=97.95 E-value=2.2e-05 Score=50.04 Aligned_cols=65 Identities=20% Similarity=0.286 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999953999988331999999999940-----6896999999998856899934629999999996
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQIT-----DQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~-----~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
..++|..+++.|++ +|+|+.+||..++.... ....++.++.+|+.+|+|+||.|+.+||..++..
T Consensus 11 l~~~F~~y~d~dg~-~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 11 LINVFHAHSGKEGD-KYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHGGGSSC-CSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-CCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998266899-88751999999999865211356899999999999974999997969999999999
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=97.93 E-value=2.5e-06 Score=56.25 Aligned_cols=81 Identities=19% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCCCHHHHCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHH
Q ss_conf 985133100462168899-9999999999995399998833199999999994068969999999988568999346299
Q 002711 158 DGMLPKSSFGQCIGMNES-KDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEE 236 (889)
Q Consensus 158 dG~Is~~ef~~~lg~~~~-~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~e 236 (889)
+|.++.++..-+-.+... -....++|..+ |.++ +|.|+.+||..++..++....++.++.+|+.+|.|++|+|+.+
T Consensus 3 ~g~id~~~~~ma~~l~~~~i~~l~~~F~~~-D~d~--~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~ 79 (87)
T d1s6ja_ 3 SGHIDDDDKHMAERLSEEEIGGLKELFKMI-DTDN--SGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG 79 (87)
T ss_dssp SSSSSSHHHHSSSSSCSSSTTTTTTHHHHH-CTTC--SSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred CCCCCCHHHHHHHHCCHHHHHHHHHHHHHH-CCCC--CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEHH
T ss_conf 986486479998659999999999999998-4899--9938299999999973899999999999998289999838499
Q ss_pred HHHHH
Q ss_conf 99999
Q 002711 237 EVKEI 241 (889)
Q Consensus 237 El~~i 241 (889)
||..+
T Consensus 80 EFl~a 84 (87)
T d1s6ja_ 80 EFIAA 84 (87)
T ss_dssp HHTTC
T ss_pred HHHHH
T ss_conf 99998
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=97.91 E-value=7.2e-06 Score=53.24 Aligned_cols=63 Identities=19% Similarity=0.271 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999995399998833199999999994068-9699999999885689993462999999999
Q 002711 178 FASELFDALARRRGLTSSSITKSELRGFWEQITDQ-SFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 178 ~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~-~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
...++|..+ +.++ +|+|+.+||..++..++.. ..++.++.+|+.+|.|+||.|+.+||..+|.
T Consensus 3 el~~~F~~~-D~d~--~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 3 EILRAFKVF-DANG--DGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHH-SCSG--GGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHH-CCCC--CCEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
T ss_conf 999999988-6998--491749999999998489999999999999986799999181999999997
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=1.1e-05 Score=52.17 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC----------------CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
Q ss_conf 999999999539999883319999999999406----------------8969999999988568999346299999999
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITD----------------QSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~----------------~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il 242 (889)
...+|.. .|.|+ +|.|+.+||..++..... ...++.++.+|+.+|+|+||+||.+||.+.+
T Consensus 18 ~r~~F~~-~D~Dg--dG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~ 94 (99)
T d1snla_ 18 PKTFFIL-HDINS--DGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST 94 (99)
T ss_dssp HHHHHHH-HCSSC--CSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred HHHHHHH-HCCCC--CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 9999999-77799--89198999999999987751302100111112077899999999998089999969299999998
Q ss_pred H
Q ss_conf 9
Q 002711 243 A 243 (889)
Q Consensus 243 ~ 243 (889)
+
T Consensus 95 ~ 95 (99)
T d1snla_ 95 Q 95 (99)
T ss_dssp H
T ss_pred H
T ss_conf 4
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.88 E-value=2.3e-05 Score=49.98 Aligned_cols=59 Identities=15% Similarity=0.306 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHH
Q ss_conf 99999999953999988331999999999940689699999999885689993462999999
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKE 240 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~ 240 (889)
..+.|..+ |. +++|.|+.+||..++..++....++.+..+|+.+|.|+||.|+.+||.+
T Consensus 3 l~~aF~~f-D~--~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 3 FVKAFQVF-DK--ESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHH-CT--TCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred HHHHHHHH-CC--CCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHCC
T ss_conf 99999997-77--9997483799999999829999899999999980889899593999509
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=97.86 E-value=1.6e-05 Score=51.06 Aligned_cols=63 Identities=22% Similarity=0.273 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
Q ss_conf 999999999539999883319999999999-----4068969999999988568999346299999999964
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-----~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~ 245 (889)
+.++|..++ ++ +|.|+.+||..++.. +.....++.++.+|+.+|+|+||+|+.+||..++...
T Consensus 11 l~~~F~~yd---~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 11 MMFTFHKFA---GD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHH---GG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHC---CC-CCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 999999876---99-997739999999998565334332789999999999817999989599999999999
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=97.84 E-value=2.5e-05 Score=49.71 Aligned_cols=70 Identities=24% Similarity=0.332 Sum_probs=50.4
Q ss_pred HHHHHHHHHH-CCCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999885-68999-3462999999999642016201368879999999988619999975139999999981
Q 002711 216 ARLETFFDMV-DKNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 216 e~l~~~F~~f-Dkd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+...|..| +++|+ +.++++||++++...... -+....+ .+.++.+|+++|.|+||.|+|+||..++..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~-~l~~~~d--~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSH-FLEEIKE--QEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTT-TSCCCCS--HHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-HHCCCCC--HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999970658985728799999999998789-8668998--899999999865799996979999999999
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=2.4e-05 Score=49.88 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
...+++|+.+ |.+++|.|+.+|+..++... +.+++.++.+|+++|.|+||+|+.+||..+|.+
T Consensus 10 ~~~~~~F~~~---D~d~~G~is~~e~~~~l~~~--~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 10 AKYDEIFLKT---DKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHH---CTTCSSEECHHHHHHHHHTT--TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHHH---CCCCCCCCCHHHHHHHHHHC--CCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf 9999999987---89999987087777788732--799999999999807899981719999999999
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.78 E-value=4.4e-05 Score=48.11 Aligned_cols=61 Identities=13% Similarity=0.299 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
Q ss_conf 9999999995399998833199999999994068969999999988568999346299999999
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEII 242 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il 242 (889)
..+.|.. .|.+++|.|+.+||..++..++-...++.++.+|+.+|+|++|+|+..||...+
T Consensus 22 l~~~F~~---~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 22 ITQEFEN---FDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHH---HCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHH---HCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHH
T ss_conf 9999999---878999527724889999992999875678887530246999939499999972
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=9.5e-05 Score=45.90 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
+...++...|...|.+++|.|+.+|+..++... +.+++.++.+++.+|.|+||+|+.+||..++.+
T Consensus 6 ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~--~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 6 EQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH--SSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC--CCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf 999999999998599866323578888889871--699999999999857899981619999999999
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.72 E-value=2.7e-05 Score=49.50 Aligned_cols=70 Identities=23% Similarity=0.354 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC--CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999999999539999883319999999999406--896999999998856899934629999999996
Q 002711 174 ESKDFASELFDALARRRGLTSSSITKSELRGFWEQITD--QSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 174 ~~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~--~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
.+......+|..+++.++ ++|+|+.+||..++..... ...++.++.+|+.+|+|+||.|+.+||..++..
T Consensus 4 ~~~~~l~~~F~~y~~~d~-~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEG-DPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSS-STTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC-CCCEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 639999999998842789-999787999999999876888999999999999975899980969999999999
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=97.66 E-value=8.6e-05 Score=46.19 Aligned_cols=69 Identities=10% Similarity=0.168 Sum_probs=49.2
Q ss_pred HHHHHHHHH-CCCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885-68999-3462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMV-DKNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~f-Dkd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+-..|..| .++|| +.+++.||++++....... +.... .++.++.+|+++|.|+||.|+|+||..++..
T Consensus 10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~-l~~~~--d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGF-LQSGK--DKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTC-C--------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCC--CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999706489836288999999999987998-65899--8899999999866899995979999999999
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=97.66 E-value=3.5e-05 Score=48.75 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=48.1
Q ss_pred HHHHHHHHH-CCCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999885-68999-3462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMV-DKNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~f-Dkd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+-..|..| .++|| +.++++||++++...... -+.... .++.++.+|+++|.|+||.|+|+||..++..
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~-~l~~~~--d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAA-FTQNQK--DPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHH-HHHHCC--CTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-HHCCCC--CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999973748986727799999999998789-865899--8899999999865799995969999999999
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.66 E-value=4.4e-05 Score=48.07 Aligned_cols=61 Identities=15% Similarity=0.218 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999999539999883319999999999406896999999998856899934629999999996
Q 002711 178 FASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 178 ~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
...++|+.+| +++|.|+.+|+..++... +.+.+.|+.+++++|.|+||+|+.+||..++.+
T Consensus 11 ~y~~~F~~~D----~~~G~i~~~el~~~l~~~--gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 11 KYDAIFDSLS----PVNGFLSGDKVKPVLLNS--KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp HHHHHHHHTC----CBTTEEEHHHHHHHHTTS--SCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHC----CCCCCEEHHHHHHHHHHC--CCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf 9999999818----999936388899999982--979999999999866799983859999999999
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.66 E-value=0.00012 Score=45.15 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=49.3
Q ss_pred HHHHHHHHHC-CCCC-CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999998856-8999-3462999999999642016201368879999999988619999975139999999981
Q 002711 217 RLETFFDMVD-KNLD-GRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 217 ~l~~~F~~fD-kd~d-G~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
.+-..|..|- ++|+ +.+++.||++++...... -+... ..-+..++.+|+.+|.|+||.|+|+||..++..
T Consensus 11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~-~l~~~-~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQN-FLKKE-NKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTT-TTTTG-GGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-HHCCC-CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999982758974518799999999998688-85477-789899999999866899996969999999862
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=97.60 E-value=8e-05 Score=46.40 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=46.7
Q ss_pred HHHHHHHH---HHHCCCCCCCCCHHHHHHHHHHHCC--CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999---9539999883319999999999406--896999999998856899934629999999996
Q 002711 179 ASELFDAL---ARRRGLTSSSITKSELRGFWEQITD--QSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l---~~~d~~~~G~Id~~EF~~~~~~~~~--~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
...++.+| ++.+++ +|+|+.+||..++..... ...++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 13 i~~l~~vF~~y~d~dg~-~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 13 IETVVTTFFTFARQEGR-KDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHTTSSS-SSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCC-CCEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999997225899-89885999999999855666899999999999866899996979999999999
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=97.54 E-value=0.00018 Score=44.00 Aligned_cols=63 Identities=19% Similarity=0.278 Sum_probs=47.1
Q ss_pred HHHHHHHHHHCCCCCC-CCCHHHHHHHHHHH-----CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999953999988-33199999999994-----06896999999998856899934629999999996
Q 002711 180 SELFDALARRRGLTSS-SITKSELRGFWEQI-----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G-~Id~~EF~~~~~~~-----~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
-.+|...++.++ +| +|+.+||.+.+... .....++.++.+++.+|.|+||.|+.+||..++..
T Consensus 12 ~~vF~kya~~dG--d~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 12 VCTFQEYAGRCG--DKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHTSSS--CTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHCCCCC--CCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999837589--989687999999999864402456899999999999975799997969999999999
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=97.52 E-value=0.00031 Score=42.54 Aligned_cols=65 Identities=22% Similarity=0.404 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 999999999539999883319999999999-----406896999999998856899934629999999996
Q 002711 179 ASELFDALARRRGLTSSSITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 179 ~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-----~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
+-++|...++.+++ .++|+.+||...+.. ......++.+..+|+..|.|+||.|+.+||..++..
T Consensus 10 li~vF~kya~~~g~-~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 10 IVNIFHQYSVRKGH-FDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHTSSSS-TTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCC-CCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999987456899-78686999999999872212467899999999999875799986979999999999
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.49 E-value=4.2e-05 Score=48.22 Aligned_cols=63 Identities=13% Similarity=0.226 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999999539999883319999999999406896999999998856899934629999999996
Q 002711 177 DFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 177 ~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
...+++|+.+ |.++ +|.|+.+|+.+++... +.+++.++.+++++|.|+||.|+++||..+|.+
T Consensus 11 ~~y~~~F~~~-D~d~--~G~i~~~e~~~~l~~s--~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L 73 (99)
T d1qjta_ 11 PVYEKYYRQV-EAGN--TGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp THHHHHHHHH-CCTT--SSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCC--CCCCCHHHHHHHHHHC--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 8999999987-8787--7745599999999982--885999999999875799971289999999999
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=1.9e-05 Score=50.54 Aligned_cols=79 Identities=14% Similarity=0.274 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHCCC-----CCCCCCHHHHCCCCC----CC-CCHHHHHHHHHHHHHHCC-----CCCCCCCHHHHHHH
Q ss_conf 9100999999998062-----898513310046216----88-999999999999995399-----99883319999999
Q 002711 141 GTEGWGEVEKRFDELA-----VDGMLPKSSFGQCIG----MN-ESKDFASELFDALARRRG-----LTSSSITKSELRGF 205 (889)
Q Consensus 141 ~~~~~~~l~~~F~~ld-----~dG~Is~~ef~~~lg----~~-~~~~~~~~lf~~l~~~d~-----~~~G~Id~~EF~~~ 205 (889)
+..++..+.+.|+.++ .+|.|++++|+.++. .. ..+.++++||.+++..+. .++|.|++.||+.+
T Consensus 23 s~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~ 102 (118)
T d1tuza_ 23 STKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCY 102 (118)
T ss_dssp CCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHH
T ss_conf 99999999999832223567742333899999999975788874689999999997045555555677764619999999
Q ss_pred HHHHCCCCHHHHHH
Q ss_conf 99940689699999
Q 002711 206 WEQITDQSFDARLE 219 (889)
Q Consensus 206 ~~~~~~~~~ee~l~ 219 (889)
++.++.+.++|||+
T Consensus 103 LS~l~~G~~eeKL~ 116 (118)
T d1tuza_ 103 FSLLEGGRPEDKLE 116 (118)
T ss_dssp HHHHHSCCCSCCCC
T ss_pred HHHHCCCCHHHHHC
T ss_conf 99982899898135
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=97.40 E-value=0.00012 Score=45.34 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-------CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 999999999999539999883319999999999406-------896999999998856899934629999999996
Q 002711 176 KDFASELFDALARRRGLTSSSITKSELRGFWEQITD-------QSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 176 ~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~-------~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
+..+..++..+...+ +++|.|+..||...+..... ...++.+..+|+.+|+|+||.|+.+||..++..
T Consensus 6 E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 6 ERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999999999976-999946699999999987642112346699999999999865899993969999999999
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=5.9e-05 Score=47.26 Aligned_cols=65 Identities=22% Similarity=0.322 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999999999539999883319999999999406896999999998856899934629999999996
Q 002711 175 SKDFASELFDALARRRGLTSSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 175 ~~~~~~~lf~~l~~~d~~~~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
......++|+.+ |.++ +|.|+.+|+..++... +.+++.|+.+++++|.|+||+|+.+||..+|.+
T Consensus 20 e~~~y~~lF~~~-D~d~--~G~Is~~e~~~~l~~s--~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L 84 (110)
T d1iq3a_ 20 QREYYVNQFRSL-QPDP--SSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp SHHHHHHHHHHH-CCSS--SSEEEHHHHHHHCCSS--SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCC--CCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHH
T ss_conf 999999999984-9876--6440188999999752--122088999999835699982979999999999
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=97.39 E-value=4.7e-05 Score=47.93 Aligned_cols=29 Identities=21% Similarity=0.520 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999885689993462999999999
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
++.++.||++||+|+||+|+.+||+.+|.
T Consensus 2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~ 30 (33)
T d2hf5a1 2 EEEIREAFRVFDKDGNGYISAAELRHVMT 30 (33)
T ss_dssp HHHHHHHHHHHSSSCCSCBCHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 79999999874889999595999999998
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=97.30 E-value=0.00041 Score=41.71 Aligned_cols=64 Identities=20% Similarity=0.391 Sum_probs=47.2
Q ss_pred HHHHHHHHHHCCCCCC-CCCHHHHHHHHHH---HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
Q ss_conf 9999999953999988-3319999999999---4068969999999988568999346299999999964
Q 002711 180 SELFDALARRRGLTSS-SITKSELRGFWEQ---ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G-~Id~~EF~~~~~~---~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~ 245 (889)
-++|...++.++ +| +|+..||...+.. ......++.+..+++..|.|+||.|+.+||..++...
T Consensus 12 i~vF~kya~~dg--~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 12 VAIFHKYSGREG--DKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHTSSS--CTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHCCCCC--CCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 999999746689--97843699999999998875423879999999998669999979699999999999
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.003 Score=36.05 Aligned_cols=84 Identities=6% Similarity=0.172 Sum_probs=45.5
Q ss_pred CCCCCHHHHHHHHHH--HCCCCHHHHHHHHHHHHC------CCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 883319999999999--406896999999998856------899934629999999996420162013688799999999
Q 002711 194 SSSITKSELRGFWEQ--ITDQSFDARLETFFDMVD------KNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALI 265 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~--~~~~~~ee~l~~~F~~fD------kd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i 265 (889)
.+.++-+|+.+.... ++. .+++.+++.|. .+.+|.|+.++|+.++.........+ +.+++.+
T Consensus 5 ~s~l~p~~l~~L~~~T~fs~----~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~------~~l~~rl 74 (118)
T d1tuza_ 5 RGLISPSDFAQLQKYMEYST----KKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP------RHLSLAL 74 (118)
T ss_dssp CSCSCHHHHHHHHHHHHHCC----CCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCC------HHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCH----HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH------HHHHHHH
T ss_conf 58789999999998857899----9999999998322235677423338999999999757888746------8999999
Q ss_pred HHHCCCCCC--------CCCCHHHHHHHHH
Q ss_conf 886199999--------7513999999998
Q 002711 266 MEELDPHNL--------GYIELYNLEMLLL 287 (889)
Q Consensus 266 ~~e~D~d~d--------G~Is~~EF~~~l~ 287 (889)
|.-+|.|+| |.|++.||+..|.
T Consensus 75 F~~FD~~~d~~~~~~~~g~I~f~efv~~LS 104 (118)
T d1tuza_ 75 FQSFETGHCLNETNVTKDVVCLNDVSCYFS 104 (118)
T ss_dssp HHHSCCCCCTTCCCCCSCCEEHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCEEEHHHHHHHHH
T ss_conf 999704555555567776461999999999
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=97.06 E-value=0.00038 Score=41.94 Aligned_cols=65 Identities=15% Similarity=0.272 Sum_probs=46.9
Q ss_pred HHHHHHHH---HHHCCCCCC-CCCHHHHHHHHHH-HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
Q ss_conf 99999999---953999988-3319999999999-4068969999999988568999346299999999964
Q 002711 179 ASELFDAL---ARRRGLTSS-SITKSELRGFWEQ-ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 179 ~~~lf~~l---~~~d~~~~G-~Id~~EF~~~~~~-~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~ 245 (889)
...++++| ++.++ +| .++.+||..++.. +.....++.+...|+..|.|+||+|+.+||..++...
T Consensus 9 i~~ii~~F~kya~~dG--~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 9 LNSIIDVYHKYSLIKG--NFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHTSSS--CTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999999815579--977158999999999865886666999999998678999969599999999999
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.02 E-value=0.00025 Score=43.09 Aligned_cols=31 Identities=39% Similarity=0.534 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 6999999998856899934629999999996
Q 002711 214 FDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 214 ~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
.++.|..+|++||||+||+|+.+||.++++.
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~ 32 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRA 32 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 7889999999981477664069999999872
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=96.70 E-value=0.0056 Score=34.26 Aligned_cols=64 Identities=19% Similarity=0.359 Sum_probs=45.3
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 99999999539999883319999999999-----406896999999998856899934629999999996
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-----~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
-.+|...+..+++ .+++++.||.+.+.. +......+.+...|+..|.|+||.|+.+||..++..
T Consensus 12 i~vFhkYa~~~G~-~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 12 IDVFHQYSGREGD-KHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHTSSSS-TTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 9999997065898-57287999999999987898668998899999999865799996979999999999
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=96.57 E-value=0.0037 Score=35.42 Aligned_cols=65 Identities=23% Similarity=0.320 Sum_probs=45.5
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
Q ss_conf 99999999539999883319999999999-----4068969999999988568999346299999999964
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQ-----ITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIALS 245 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-----~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~ 245 (889)
-.+|...+..+++ .++++..||...+.. +......+.+..+|+..|.|+||.|+.+||..++...
T Consensus 12 i~vFhkYa~~~G~-~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 12 IAIFQKHAGRDGN-NTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHTTSSC-TTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999997374898-672779999999999878986589988999999998657999959699999999999
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=96.13 E-value=0.0098 Score=32.67 Aligned_cols=63 Identities=19% Similarity=0.327 Sum_probs=42.8
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHH-H----CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
Q ss_conf 9999999539999883319999999999-4----06896999999998856899934629999999996
Q 002711 181 ELFDALARRRGLTSSSITKSELRGFWEQ-I----TDQSFDARLETFFDMVDKNLDGRITEEEVKEIIAL 244 (889)
Q Consensus 181 ~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~----~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~~ 244 (889)
.+|...+..+++ .+++++.||...+.. + ......+.+..+|+..|.|+||.|+.+||..++..
T Consensus 13 ~vFhkYa~~~g~-~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 13 DVFSRYSGSEGS-TQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHTTSSSC-TTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999997064898-36288999999999987998658998899999999866899995979999999999
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0012 Score=38.56 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=48.0
Q ss_pred HHHHHHHHHCCC-CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 999999885689-99346299999999964201620136887999999998861999997513999999998199
Q 002711 217 RLETFFDMVDKN-LDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQAP 290 (889)
Q Consensus 217 ~l~~~F~~fDkd-~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~~p 290 (889)
-+.-.|...|.| .||.++..||+.+....... +.-++..++..|.|+||.|++.|+...+.-..
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~~----------e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v~~ 142 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPM----------EHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 142 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTTSTT----------GGGHHHHHHHHCTTCSSSEEHHHHHHHTTCCG
T ss_pred CCEEEHHHCCCCCCCCCCCHHHHHHHHHHHCCC----------CHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCH
T ss_conf 512015323799877866999999999850688----------55779999986689999699999999819984
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=95.47 E-value=0.039 Score=28.75 Aligned_cols=63 Identities=16% Similarity=0.334 Sum_probs=40.9
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HC----CCC-HHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 99999999539999883319999999999-40----689-699999999885689993462999999999
Q 002711 180 SELFDALARRRGLTSSSITKSELRGFWEQ-IT----DQS-FDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 180 ~~lf~~l~~~d~~~~G~Id~~EF~~~~~~-~~----~~~-~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
-.+|...+..+++ .+++++.||.+.+.. +. ... ....+..+|+..|.|+||.|+.+||..++.
T Consensus 13 i~vFhkYa~~~G~-~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 13 INTFHQYSVKLGH-PDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHTTSSS-TTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 9999998275897-45187999999999986888547778989999999986689999696999999986
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=93.53 E-value=0.026 Score=29.91 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=24.5
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999988619999975139999999981
Q 002711 260 EYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 260 e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
+.+...|+.+|.|++|+|+.+|+..+|..
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~ 31 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTN 31 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998748899995959999999987
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=92.92 E-value=0.054 Score=27.83 Aligned_cols=30 Identities=30% Similarity=0.356 Sum_probs=25.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999999988619999975139999999981
Q 002711 259 EEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 259 ~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
++.....|+.+|+|.||+|+.+||..+++.
T Consensus 3 EeELae~FRifDkNaDGyiD~eEl~~ilr~ 32 (34)
T d1ctda_ 3 EEELANAFRIFDKNADGYIDIEELGEILRA 32 (34)
T ss_dssp HHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 889999999981477664069999999872
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.99 E-value=0.28 Score=23.11 Aligned_cols=69 Identities=14% Similarity=0.227 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHCC
Q ss_conf 99999999885689993462999999999642016201368879999999988619999----97513999999998199
Q 002711 215 DARLETFFDMVDKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHN----LGYIELYNLEMLLLQAP 290 (889)
Q Consensus 215 ee~l~~~F~~fDkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~----dG~Is~~EF~~~l~~~p 290 (889)
...+..+|+.|-.+ .+.+|.+||...+.........+ ++.+..+|.++.++. .+.+++++|...|....
T Consensus 7 R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~------~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 7 RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAG------PALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp CHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCS------HHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSST
T ss_pred CHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHCCCCCCC------HHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCC
T ss_conf 38799999999389-98448999999999986885578------999999999984668664258748999999981853
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.30 E-value=0.073 Score=26.94 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
Q ss_conf 88331999999999940689699999999885689993462999999999
Q 002711 194 SSSITKSELRGFWEQITDQSFDARLETFFDMVDKNLDGRITEEEVKEIIA 243 (889)
Q Consensus 194 ~G~Id~~EF~~~~~~~~~~~~ee~l~~~F~~fDkd~dG~Is~eEl~~il~ 243 (889)
+|.++..|+..+-..+ ...+..++.+|+.+|.|+||.||..|...-+.
T Consensus 92 D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 92 DGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp SSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHH--CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCC
T ss_conf 7866999999999850--68855779999986689999699999999819
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=82.98 E-value=0.97 Score=19.58 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=36.7
Q ss_pred CCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 689993462999999999642016201368879999999988619999975139999999981
Q 002711 226 DKNLDGRITEEEVKEIIALSASANKLSKIQERVEEYAALIMEELDPHNLGYIELYNLEMLLLQ 288 (889)
Q Consensus 226 Dkd~dG~Is~eEl~~il~~~~~~~~l~~~~e~~~e~~~~i~~e~D~d~dG~Is~~EF~~~l~~ 288 (889)
|.|+||.|+..++..+.........++. . -+..+|.|+||.|+..++..+.+.
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~------~----~~~aaDvn~Dg~i~i~D~~~l~~~ 54 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTD------D----AKARADVDKNGSINAADVLLLSRY 54 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCH------H----HHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCH------H----HHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9888988939999999999938899971------1----333004588898889999999999
|