Citrus Sinensis ID: 002719

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------89
Protein Sequence
MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHcccccHHHHHHHHHcccccEEEEEEcccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHcccccccccccccccEEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHcHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEccccccccccccEccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHccccEEEEEcccccccEHccccccccHHHHHHHHcccccEEEEEEccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHccccHHcccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHccccHEEEEEccccccEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccEEcccccHHHEEEcccccEEEccccccEEcccccccccccEEEEEccEEEEEccccHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHHHHHHHHcHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHccccEccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
malvssvpaiaqgvdsvrcpdiqmagitssrrgiveepvasvIEDKIYVAVAKQVKESKSVLLWALQnsggkriciihvhtpaqmipvmgtkfpassleeEKVQAYREIERQDMHNHLDMCLLICRQMGvraekldtesesTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVrqqapaschiWFICngnliytregsldgidpeisspsfqashntenrhpnclrsqsvvlrhnrpmkltnpvqDLFHRVRsmnfdrnvgnvmtsqdsigglsspasrsdaevssdecttgrstsqgslsscssrgvidvamiplirtegvstlppskedlqssppsvldgsvddNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSrkeasssshmpqffsdfsfseiegathnfdpslkigeggygSIYKGLLRHMQVAIKMlhphslqgpseFQQEIDILskirhpnlvtlvgaCPEVWTLVYEYlpngsledrlsckdnspplswQTRIRIATELCSVLIFlhsckphsivhgdlkpanilldanfvskLSDFgisrflsqneissnnttlccrtdpkgtfaymdpeflasgeltpksdvysFGIILLRLLtgrpalgiTKEVQYALDtgklknlldplagdwpfVQAEQLANLAMRCCEmsrksrpelgkDVWRVLepmrascggstsyrlgseercepppyftcpifqevmqdphvaadgfTYEAEALKGwldsghetspmtnlplahknlvpnLALRSAIQEWLQQH
Flexible Loop (DISEMBL)
malvssvpaiaqgvdsvrcpDIQMagitssrrgivEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKldtesestEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQAshntenrhpnCLRSqsvvlrhnrpmKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSdecttgrstsqgslsscssrGVIDVAMIPLIRTEGVstlppskedlqssppSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEAlrrgkaekdaiesirrakaseslyaeELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKsrkeasssshmpqFFSDFSFSEIEGAThnfdpslkigEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLsqneissnnttlcCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSrksrpelgkdvwRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH
Low Complexity Region (SEG)
MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAAdkhykkkmmdlkskkAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDECttgrstsqgslsscssrgVIDVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH
Disordered region (IsUnstruct)
*********IAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFP**********AYREIERQDMHNHLDMCLLICRQMGVRA***********KGILELISHYGIRKLVMGAAADKHYKKK********AISVRQQAPASCHIWFICNGNLIYTREGS*********************************************VQDLFHRVRSM****************************************************GVIDVAMIPLIRT*******************************************************************************************************************************************************************************************DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMS******LGKDVWRVLEPMRASCG****Y*******CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSG*******NLPLAHKNLVPNLALRSAIQEW****
Disordered Region (DISOPRED)
*********************************************KIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPV*G***************YREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKM***********RQQAPASCHIWFICNGNLI**************************************************************************************************************************************************************************************************************************************************************************SAV*******************************************FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKM**********EFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL**********************************************TYEA******************LPLAHKNLVPNLALRSAIQEWLQ**
Disordered Region (DISEMBL)
MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAE*********EKGILELISHYGIRKLVMGAAADKHYKKKMM**************PASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQ*************************************SRGVIDVAMIPLIRTEGVST***************LDGSVDDNLYDQLAQ************************DAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE******************************MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH
Disordered Region (DISPRO)
**************************************V*SVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREG***************************************************************************************************************************************************DDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRK**********FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS****************PPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDGSVxxxxxxxxxxxxxxxxxxxxxxxxxALRRGKAEKDAIESIRRAKASESLYAEELKRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	888	2.2.26 [Sep-21-2011]
Q8GUH1	834	U-box domain-containing p	yes	no	0.929	0.989	0.568	0.0
Q94A51	805	U-box domain-containing p	no	no	0.570	0.629	0.447	1e-121
Q9SW11	835	U-box domain-containing p	no	no	0.873	0.929	0.318	1e-105
Q0DR28	518	U-box domain-containing p	no	no	0.453	0.777	0.452	1e-101
Q9FKG6	845	U-box domain-containing p	no	no	0.518	0.544	0.406	2e-99
Q9FKG5	796	U-box domain-containing p	no	no	0.448	0.5	0.455	1e-98
Q9LU47	819	Putative U-box domain-con	no	no	0.462	0.501	0.430	1e-96
Q8S8S7	801	U-box domain-containing p	no	no	0.409	0.454	0.424	2e-86
Q9FGD7	765	Putative U-box domain-con	no	no	0.518	0.601	0.322	7e-63
O80623	815	Probable receptor-like pr	no	no	0.296	0.322	0.385	7e-51

>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/896 (56%), Positives = 639/896 (71%), Gaps = 71/896 (7%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
           MALVS +PA+ +   S+R   I   G  SSR GI++EPV+ +I++KI+VAV K V +SKS
Sbjct: 1   MALVSPIPAMGERAGSMRFHGIGSPGSRSSRSGIMDEPVSRLIDEKIFVAVDKHVAKSKS 60

Query: 61  VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
            L+WALQN+GGK+IC+IHVH P+QMIP+MG KFP  +++EE+V+ +RE ER+ +H  LD 
Sbjct: 61  TLIWALQNTGGKKICLIHVHQPSQMIPLMGAKFPVGAVKEEEVRVFREKEREKVHMILDD 120

Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
            L IC+Q GVRAEK+  E ES E GI++LIS  GIRKLVMGAAAD+HY ++M DLKS+KA
Sbjct: 121 YLRICQQRGVRAEKMFIEMESIENGIVQLISELGIRKLVMGAAADRHYSRRMTDLKSRKA 180

Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPS--------FQASHNTENRHP 232
           I VR++AP  C IWF C G LI+TRE ++D  + E +SP          Q     E+ H 
Sbjct: 181 IFVRREAPTLCQIWFTCKGYLIHTREATMDDTESEYASPRPSISASDLLQTFSTPESEHQ 240

Query: 233 NCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDA 292
           +  R QS           T+ VQ L            V N  +++ S          SD 
Sbjct: 241 HISRVQS-----------TDSVQQL------------VSNGSSTEQS-------GRVSDG 270

Query: 293 EVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDG 352
            +++DE       S GS                     G +T+  S     SS P   DG
Sbjct: 271 SLNTDE---EERESDGS------------------EVTGSATVMSSGHSSPSSFP---DG 306

Query: 353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
            VDD+   ++ +A +EA +S++EAF E LRR KAEK+A+++IRRAK SES Y+EELKRRK
Sbjct: 307 -VDDSFNVKIRKATSEAHSSKQEAFAETLRRQKAEKNALDAIRRAKQSESAYSEELKRRK 365

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
           + E A+A  K     +K + + +MEELQ A+ QK++LESQIA+SD T ++L QK+  AV+
Sbjct: 366 DTEIAVAKEKERFITIKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKLNQKLDIAVK 425

Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDP 532
           LLQ  + E++ELQ ERD+A++EAEELR   +  +S+  +PQ+F+DFSFSEIE AT++FD 
Sbjct: 426 LLQKLRDEREELQTERDRALREAEELRSHAE--TSTLQLPQYFTDFSFSEIEEATNHFDS 483

Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +LKIGEGGYGSIY GLLRH QVAIKML+P+S QGP E+QQE+D+LSK+RHPN++TL+GAC
Sbjct: 484 TLKIGEGGYGSIYVGLLRHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGAC 543

Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
           PE W+LVYEYLP GSLEDRL+CKDNSPPLSWQ R+RIATE+C+ L+FLHS K HS+VHGD
Sbjct: 544 PEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGD 603

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           LKPANILLD+N VSKLSDFG    L  N   S       RTD  GT AY+DPE  +SGEL
Sbjct: 604 LKPANILLDSNLVSKLSDFGTCSLLHPNGSKS------VRTDVTGTVAYLDPEASSSGEL 657

Query: 713 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 772
           TPKSDVYSFGIILLRLLTGRPAL I+ EV+YALD G L +LLDPLAGDWPFVQAEQLA L
Sbjct: 658 TPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARL 717

Query: 773 AMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQ 832
           A+RCCE   ++RP+LG +VWRVLEPMRAS GGS+S+ LG  E    PPYF CPIFQEVMQ
Sbjct: 718 ALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVMQ 777

Query: 833 DPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           DPHVAADGFTYEAEA++ WLDS H+TSPMTN+ L+H +L+ N ALRSAIQEWLQ H
Sbjct: 778 DPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQEWLQHH 833

Functions as an E3 ubiquitin ligase.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1

 Score =  437 bits (1124), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/527 (44%), Positives = 357/527 (67%), Gaps = 20/527 (3%)

Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
           +AM +   S R  + EA ++ + +    E++ +AKA E L  +E  +RK  EE L   KL
Sbjct: 295 KAMHDIGQSDRTVYGEAGKKWEEDASTTEALCKAKALEGLCIKESSQRKRLEELLEKEKL 354

Query: 424 ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDE 483
           E++ + +Q++  M+ELQ+   +   LESQ+ +     KE  +K  +A+ELL+++++++DE
Sbjct: 355 EVKMVIEQNNGFMKELQMVQGRNLKLESQMRKLQDLEKEHGEKFDTAMELLKSFRQKRDE 414

Query: 484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
           ++++ + AVKE   LR+  K  +  S   +   D+SF EI  AT+ FDPS K+GEG YGS
Sbjct: 415 IRIDHENAVKEVNALRRLVKGETGESSGSEML-DYSFMEINEATNEFDPSWKLGEGKYGS 473

Query: 544 IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYL 603
           +YKG L+H+QVA+KML  +      EF++ ++ILS++RHPNLVTL+GACPE  +L+Y+Y+
Sbjct: 474 VYKGNLQHLQVAVKMLPSYGSLNHFEFERRVEILSRVRHPNLVTLMGACPESRSLIYQYI 533

Query: 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
           PNGSLED  S ++N P LSW++RIRIA+E+CS L+FLHS  P  I+HG+LKP+ ILLD+N
Sbjct: 534 PNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP-CIIHGNLKPSKILLDSN 592

Query: 664 FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGI 723
            V+K++D+GIS+ +  + +         ++DP     ++DP +  S E+T +SD+Y+FGI
Sbjct: 593 LVTKINDYGISQLIPIDGLD--------KSDP-----HVDPHYFVSREMTLESDIYAFGI 639

Query: 724 ILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 783
           ILL+LLT RP  GI ++V+ AL+   +  +LD  AGDWP  + ++LAN+A+RCC+ +  +
Sbjct: 640 ILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMN 699

Query: 784 RPELGKDVWRVLEPMRA---SCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADG 840
           RP+L   V R ++ M+A       ++SY   +  R  PP ++ CPIFQEVM+DP +AADG
Sbjct: 700 RPDLAV-VLRFIDRMKAPEVPSSETSSYANQNVPR-RPPSHYLCPIFQEVMKDPLIAADG 757

Query: 841 FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 887
           FTYEAEA++ WL +GH+TSPMTNL +   NL+PN AL  AIQ+W  Q
Sbjct: 758 FTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDWQNQ 804

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 278/872 (31%), Positives = 435/872 (49%), Gaps = 96/872 (11%)

Query: 47  IYVAVAKQVKESKSVLLWALQ---NSGGKRICIIHVHTPAQMIPV-MGTKFPASSLEEEK 102
           + VA++   K SK V+ WA++     G     ++H+H     +P  MG   P S + ++ 
Sbjct: 22  VVVALSGSSK-SKYVVTWAIEKFATEGNVGFKLLHIHPMITSVPTPMGNAIPISEVRDDV 80

Query: 103 VQAYR-EIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMG 161
           V AYR EI  Q          L  R+  V  E L  ES++    I E ++   I ++V+G
Sbjct: 81  VTAYRQEILWQSEEMLKPYTKLFVRR-KVAVEVLVIESDNVAAAIAEEVTRDSIDRIVIG 139

Query: 162 AAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSF 221
            ++   + +K  D+ S     +    P  C ++ +  G L   R    DG +  I     
Sbjct: 140 GSSRSFFSRKA-DICS----VISALMPNFCTVYVVSKGKLSCVRPSDSDG-NATIREDGS 193

Query: 222 QASHNTENRHPNCLRSQSVVLR----HNRPMKLTNPVQDLFHRVRSMNFDRNVG--NVMT 275
           + ++++         S  V+       +RP+ L  PV+ + H      F    G  +V  
Sbjct: 194 ERTNSSSGSSGPTSDSSDVMSSAHDSQSRPLSL--PVRRMQH------FPAIAGQASVPM 245

Query: 276 SQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTL 335
              S+G   +     DAE + D  +  RS+                       T+  S  
Sbjct: 246 ETSSVGSDETRCMSLDAEEARDVSSINRSS-----------------------TDTTSRW 282

Query: 336 PPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIR 395
            P + D                 Y++  +AM+ + +S RE      R   +      +  
Sbjct: 283 TPRRRD-----------------YEERKEAMSSS-SSNREYGNFGTRFSWSGMGVDTTHS 324

Query: 396 RAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAE 455
           RA    S  ++ L   + + +   N   E+E+++ +   V E   +A  +      ++ E
Sbjct: 325 RASQQASNMSDALSE-QSYTDNQVNLNFEVEKLRAELRHVQEMYAVAQTETFDASRKLGE 383

Query: 456 SDQ-------TAKELEQKIISAVELL----QNYKKEQDELQMERDKAVKEAEELRKSRKE 504
            +Q         +EL+ K   A EL     QN++K + + +  R++A +E  + R++ ++
Sbjct: 384 LNQRRLEEAIKLEELKLKEYEARELAEKEKQNFEKARRDAESMRERAEREIAQRREAERK 443

Query: 505 ASSSSH----------MPQF-FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ 553
           ++  +            PQ  +  F++ EI  AT +F   LKIG G YG++YK  L H  
Sbjct: 444 SARDTKEKEKLEGTLGSPQLQYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTT 503

Query: 554 VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLS 613
             +K+L     Q   +FQQE++ILSKIRHP+LV L+GACPE   LVYEY+ NGSLEDRL 
Sbjct: 504 AVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDRLF 563

Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
             +NSPPL W  R RIA E+ + L+FLH  KP  I+H DLKPANILLD NFVSK+ D G+
Sbjct: 564 QVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGL 623

Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           S  +  + +S+   T+  +T P GT  Y+DPE+  +G ++ KSD+YSFG+ILL+LLT +P
Sbjct: 624 STMVQVDPLST-KFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKP 682

Query: 734 ALGITKEVQYALDTG-KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 792
           A+ +T  V+ A+D+  +   +LD  AG+WP  +  +LA LA+ C E+  K RP+L   + 
Sbjct: 683 AIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQIL 742

Query: 793 RVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWL 852
             LE ++     + +   G     +PP +F CP+ ++VM +P VAADG+TY+  A++ WL
Sbjct: 743 PALENLKKVAEKARNSFSGVS--TQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWL 800

Query: 853 DSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
              H TSPMT+ PL  KNL+PN  L +AI EW
Sbjct: 801 KE-HNTSPMTDSPLHSKNLLPNYTLYTAIMEW 831

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q0DR28|PUB57_ORYSJ U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica GN=PUB57 PE=2 SV=1

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/433 (45%), Positives = 269/433 (62%), Gaps = 30/433 (6%)

Query: 463 LEQKIISAVELLQNY--KKEQ-----DELQMERDKAVKEAEELRKSRKEASSSSHMPQFF 515
           LE++I++       Y  +KE+     D+L+ ERD AV++  ELR        S+H+    
Sbjct: 94  LEEEIVTLKHQADTYLVQKEKAVTAYDQLKHERDNAVQQVNELR------DQSTHI---I 144

Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEID 575
            DFS  ++E AT +F  + ++G+  YG  YKG++ +M+V IK+     L     FQQE+ 
Sbjct: 145 LDFSRKDMEQATEHFKNAREVGDTEYGHTYKGMIHNMKVLIKLSSSQKL-----FQQEVS 199

Query: 576 ILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
           IL + RHPN++T +G C EV  LVYE+LPNG+LEDR+ C +NS PLSW  R +I  E+C 
Sbjct: 200 ILRQWRHPNIITFIGVCSEVSALVYEWLPNGNLEDRIICTNNSAPLSWYNRTQIIGEICC 259

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            L+FLHS K  ++VHGDL+P NIL+DAN+ SK+ +FG+S    Q      N T       
Sbjct: 260 ALLFLHSNKSTALVHGDLRPCNILIDANYRSKICNFGMSNLFLQLGTFPPNLT------- 312

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 755
                YMDPEF  +GELT  SDVYS G+I+LRLLTG P L ++++V  AL +  L  L+D
Sbjct: 313 -ARLPYMDPEFNTTGELTTLSDVYSLGVIILRLLTGMPPLTLSEKVAEALGSDSLHLLID 371

Query: 756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM-RASCGGSTSYRLGSEE 814
             AGDWP+++A+QLA + + C  M+RK RP+L  +VW V+EP+ R     +  Y   +  
Sbjct: 372 KSAGDWPYIEAKQLALIGLSCTGMTRKKRPDLLNEVWIVIEPLTRKPPAATWPYLQSASG 431

Query: 815 RCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN 874
               P  F CPI  E+M+DP VA+DGFTYEAEA++ W D G   SPMTNL L + NLVPN
Sbjct: 432 DSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPN 491

Query: 875 LALRSAIQEWLQQ 887
             LRS I  +LQQ
Sbjct: 492 RVLRSFIHGYLQQ 504

Possesses E3 ubiquitin-protein ligase in vitro. May be involved in cell death signaling.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1

 Score =  364 bits (934), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 199/490 (40%), Positives = 290/490 (59%), Gaps = 30/490 (6%)

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
            N   E+E+++ +   V E   +A  +      ++ E +Q   E  +K++   E  +  K
Sbjct: 357 VNLNFEIEKLRAELKHVQEMYAMAQTETVGASKKLTELNQRRFEESEKLVELKEKEEVAK 416

Query: 479 KEQDELQMERDKAVKEAEELR-----------------------KSRKEASSSSHMPQFF 515
               + +   ++A+KEAE+++                       K + +AS  S   Q+ 
Sbjct: 417 DTASKEKQRYEEAMKEAEKVKELMMKEALHRREAEFKAERDAREKDKLQASLVSPGVQY- 475

Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEID 575
             +++ EI  AT +F  +LKIG G YGS+YK  L H   A+K+LH    Q   +F QE++
Sbjct: 476 QHYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHHTTGAVKVLHAGETQLSKQFDQELE 535

Query: 576 ILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
           ILSKIRHP+LV L+GACPE   LVYEY+ NGSL+DRL   +++PP+ W  R RIA E+ S
Sbjct: 536 ILSKIRHPHLVLLLGACPERGCLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVAS 595

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            L+FLH  KP  I+H DLKP NILLD NFVSKL D G+S  ++Q+++SS   T+  +T P
Sbjct: 596 ALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSR--TIFKQTSP 653

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL-DTGKLKNLL 754
            GT  Y+DPE+  +G ++PKSDVYS G+++L+L+T +PA+ IT  V+ A+ D  +   +L
Sbjct: 654 VGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAIL 713

Query: 755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEE 814
           D  AG WP     +LA L + C EM R+ RP+L   +   LE +R     + +  L S  
Sbjct: 714 DKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQN--LLSRT 771

Query: 815 RCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN 874
              PP +F CP+ + VM +P VAADG+TY+ EA++ WL    +TSP+TNLPL +KNL+ N
Sbjct: 772 PSGPPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQ-KDTSPVTNLPLPNKNLIAN 830

Query: 875 LALRSAIQEW 884
             L SAI EW
Sbjct: 831 YTLYSAIMEW 840

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2

 Score =  361 bits (927), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/415 (45%), Positives = 264/415 (63%), Gaps = 17/415 (4%)

Query: 487 ERDKAVKEAEELRKSRKEASSSSH----MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYG 542
           ER +A   AEE+RK ++    +        Q +  F + EI  AT +F   LKIG GGYG
Sbjct: 382 ERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSFSDELKIGVGGYG 441

Query: 543 SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEY 602
           S+Y+  L H  VA+K+LH        +F QE++ILSKIRHP+L+ L+GACPE  +LVYEY
Sbjct: 442 SVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGSLVYEY 501

Query: 603 LPNGSLEDRLSCKD------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
           + NGSLE+RL  +         PPL W  R RIA E+ S L FLH+ +P  IVH DLKPA
Sbjct: 502 MHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPA 561

Query: 657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           NILLD N VSK+ D G+S+ +  N   S+ +T+   T P GTF Y+DPE+  +G +TP+S
Sbjct: 562 NILLDRNNVSKIGDVGLSKMV--NLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPES 619

Query: 717 DVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFVQAEQLANLAM 774
           D+Y+FGIILL+L+T R A+G+   ++ AL   TGK   +LD  AGDWP  +A+++  + +
Sbjct: 620 DIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGL 679

Query: 775 RCCEMSRKSRPELGKDVWRVLEPMR--ASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQ 832
           RC EM ++ RP+LGK++  VLE ++  AS   +       +     P +F CPI ++VM+
Sbjct: 680 RCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVME 739

Query: 833 DPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 887
           +P VA+DG+TYE  A+K WL   H+ SPMT+LP    +L+PN +L SAI+EW  Q
Sbjct: 740 NPCVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSAIKEWRSQ 793

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1

 Score =  354 bits (909), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 180/418 (43%), Positives = 264/418 (63%), Gaps = 7/418 (1%)

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHN 529
            E  +  ++E+ E    R+  +K   E ++  K   SS   P+  + +F++ EI  AT +
Sbjct: 400 TEKFEQKRREEREAAQRREAEMKATHEAKEKEKLEESSLVAPKLQYQEFTWEEIINATSS 459

Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           F   LKIG G YG +YK  L H   A+K+LH        +F QE++ILSKIRHP+LV L+
Sbjct: 460 FSEDLKIGMGAYGDVYKCNLHHTIAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLL 519

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
           GACP+   LVYEY+ NGSLEDRL   ++S P+ W  R+RIA E+ S L+FLH  KP  I+
Sbjct: 520 GACPDHGALVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPII 579

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DLKPANILL+ NFVSK+ D G+S  +   +  S   T+  +T P GT  Y+DPE+  +
Sbjct: 580 HRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRT 639

Query: 710 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---KLKNLLDPLAGDWPFVQA 766
           G ++PKSDVY+FG+I+L+LLTG+ A+ +T  V+ A++     +L  +LD  AG+WP  + 
Sbjct: 640 GRISPKSDVYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEET 699

Query: 767 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 826
            QLA LA++C E+  K RP+L   +  VLE ++     + +    S    +PP +F CP+
Sbjct: 700 RQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSL--SAAPSQPPSHFFCPL 757

Query: 827 FQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
            ++VM++P +AADG+TY+  A++ W++  H TSP+TN PL + NL+PN  L +AI EW
Sbjct: 758 LKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLYAAIVEW 814

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=3 SV=1

 Score =  321 bits (822), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/370 (42%), Positives = 231/370 (62%), Gaps = 6/370 (1%)

Query: 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEI 574
           +  ++  EI  AT  F P   IGEGGYG +Y+  L     A+K++   + +   EF +E+
Sbjct: 427 YRKYTIEEIVTATEGFSPEKVIGEGGYGKVYQCSLDSTPAAVKVVRLDTPEKKQEFLKEV 486

Query: 575 DILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
           ++LS++RHP++V L+GACPE   LVYEYL NGSLE+ +  + N PPL W  R R+  E+ 
Sbjct: 487 EVLSQLRHPHVVLLLGACPENGCLVYEYLENGSLEEYIFHRKNKPPLPWFIRFRVIFEVA 546

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             L FLHS KP  IVH DLKP NILL+ N+VSK++D G+++ ++  +++ +N T+   + 
Sbjct: 547 CGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVT--DVAPDNVTMYRNSV 604

Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 754
             GT  Y+DPE+  +G + PKSD+Y+FGII+L+LLT R   GI   V+ A+  G L  +L
Sbjct: 605 LAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEML 664

Query: 755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEE 814
           D    DWP  + E+LA + ++C E   + RP+L  +V  VL+ +      S   + GS  
Sbjct: 665 DKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRL-VETANSKVKKEGSNL 723

Query: 815 RCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN 874
           R   P ++ CPI +E+M++P +AADGFTYE +A+  WL+  H  SP+T   L H  L PN
Sbjct: 724 RA--PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPN 780

Query: 875 LALRSAIQEW 884
             LRSAI++W
Sbjct: 781 HTLRSAIRDW 790

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1

 Score =  243 bits (619), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 177/549 (32%), Positives = 272/549 (49%), Gaps = 89/549 (16%)

Query: 389 DAIESIRRAKASESLYAEELKR----------RKEFEEALANGKL-ELERMKKQHDEVME 437
           + +E +RR      L  +E  R          R E+  +L N ++ E E   K+  E  E
Sbjct: 243 EKLEYVRRKVNEAKLMIDEKSREVKVNAERSNRAEWAISLCNSRIGEFEAWIKEESERRE 302

Query: 438 ELQIALD-QKSLLE--SQIAESDQTA----KELEQKIISAVELLQNYKK----EQDELQM 486
           +LQ  LD  K  +E      E  +T      EL++ + S V+ +   K     E + + +
Sbjct: 303 KLQATLDSDKECIEEAKNYVEKGKTKLHSLAELQEVLSSKVKTMMEAKSQAEVELERVVL 362

Query: 487 ERDKAVKEAEELRKSR----------KE-----ASSSSHMPQFFSDFSFSEIEGATHNFD 531
           +R + + E E+LR  R          KE     + S   +   + ++   +I  AT  + 
Sbjct: 363 QRGEMITEIEKLRSQRDVFNRRIEFCKEREVIGSVSKEEVKCGYREYVAEDIRLATETYS 422

Query: 532 PSLKIGEGG-YGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
             L++  GG + ++Y+G ++H  VA+K++   SL   + F  ++ +L++IRHPNLV + G
Sbjct: 423 DRLRLKSGGNWTNVYRGRIKHTTVAVKVI-GDSLSDEA-FGAKVKLLNEIRHPNLVAIAG 480

Query: 591 ACPEV-WTLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKP 645
            C +    L++EY+ NG+L D L         S  L W  RIRIA ++CS L FLHS KP
Sbjct: 481 FCSQRPKCLLFEYMHNGNLRDNLFTSQRKSRRSKILKWHDRIRIAHQVCSGLGFLHSVKP 540

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             IVHG L P+ ILLD N V K++ FG+                                
Sbjct: 541 KPIVHGRLTPSKILLDRNLVPKITGFGL-------------------------------- 568

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
            + S +   K DV +FG++LL LLTGR   G+ K +  +++   +   LD  AG WP   
Sbjct: 569 IMHSDQSDTKPDVMAFGVLLLHLLTGRNWHGLLKAM--SMNQTSILRDLDQTAGKWPLEL 626

Query: 766 AEQLANLAMRCCEMSRKSRPELG-KDVWRVLEPMRASC------GG---STSYRLGSEER 815
           A++   LA++C  ++R    +   K++   L  +R         GG   +T+  +   + 
Sbjct: 627 AKEFGALAVKCSSVNRGGNMDFSTKEIMEELGKIREKADEFKTKGGYEEATNSNMDEGDP 686

Query: 816 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNL 875
            + P  F CPI QEVM++PHVAADGF+YE EA++ WL  GH+TSPMTNL L ++ L PN 
Sbjct: 687 NDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNH 746

Query: 876 ALRSAIQEW 884
            LRS IQ+W
Sbjct: 747 TLRSLIQDW 755

Functions as an E3 ubiquitin ligase.

Arabidopsis thaliana (taxid: 3702)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|O80623|Y2393_ARATH Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1

 Score =  202 bits (515), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 176/288 (61%), Gaps = 25/288 (8%)

Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR 581
           I+ AT +FD SL IG GG+G +YKG+LR   +VA+K   P S QG +EF+ E+++L++ R
Sbjct: 480 IKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFR 539

Query: 582 HPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
           H +LV+L+G C E     +VYEY+  G+L+D L   D+ P LSW+ R+ I       L +
Sbjct: 540 HRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHY 599

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF---LSQNEISSNNTTLCCRTDPK 696
           LH+    +I+H D+K ANILLD NF++K++DFG+S+    L Q  +S         T  K
Sbjct: 600 LHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVS---------TAVK 650

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL--GITKE----VQYAL---DT 747
           G+F Y+DPE+L   +LT KSDVYSFG+++L ++ GRP +   + +E    +++A+     
Sbjct: 651 GSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKK 710

Query: 748 GKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
           GKL++++DP L G     + ++   +  +C   +   RP +G  +W +
Sbjct: 711 GKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNL 758

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	888
359489801	881	PREDICTED: U-box domain-containing prote	0.980	0.988	0.670	0.0
147772798	881	hypothetical protein VITISV_015820 [Viti	0.981	0.989	0.667	0.0
224064033	809	predicted protein [Populus trichocarpa]	0.908	0.997	0.694	0.0
356568394	883	PREDICTED: U-box domain-containing prote	0.984	0.989	0.644	0.0
224127680	810	predicted protein [Populus trichocarpa]	0.896	0.982	0.660	0.0
87240964	884	Protein kinase; U box [Medicago truncatu	0.984	0.988	0.643	0.0
357507363	896	U-box domain-containing protein [Medicag	0.984	0.975	0.643	0.0
356531997	883	PREDICTED: U-box domain-containing prote	0.984	0.989	0.638	0.0
356522608	879	PREDICTED: U-box domain-containing prote	0.977	0.987	0.622	0.0
356506214	877	PREDICTED: U-box domain-containing prote	0.980	0.993	0.611	0.0

>gi|359489801|ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera] gi|297745303|emb|CBI40383.3| unnamed protein product [Vitis vinifera]

 Score = 1196 bits (3094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/896 (67%), Positives = 719/896 (80%), Gaps = 25/896 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEE-PVASVIEDKIYVAVAKQVKESK 59
           MA+VS VPAI+Q +D VR  +I ++ + SS   IVEE P+A V+EDKI+VAV K+VKESK
Sbjct: 1   MAVVSPVPAISQQLDHVRLHEIGVSAVMSSTGEIVEEQPLALVVEDKIFVAVGKEVKESK 60

Query: 60  SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
           S+L+WALQNSGGKRI I+HVH PAQMIP+MG KFPAS L+E++V+AYR++ERQDMH  L+
Sbjct: 61  SILVWALQNSGGKRISIVHVHQPAQMIPIMGGKFPASKLKEQEVKAYRDLERQDMHKILN 120

Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
             LLICR+ GVRAEKL  ESE+ EKGILELIS +GI+KLV+GAAADKHY ++M++ KSKK
Sbjct: 121 DYLLICRKAGVRAEKLYIESENVEKGILELISEHGIKKLVVGAAADKHYSRRMLEPKSKK 180

Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSP-SFQASHNTENRHPNCLRSQ 238
           A  VR +AP  CHIWF+C G+LIYTREGSL+G D E+ +P S QAS N E    N  RS 
Sbjct: 181 AAYVRDKAPLFCHIWFVCRGHLIYTREGSLNGADIELRTPPSQQASPNNETGQSNTFRSM 240

Query: 239 SVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSD- 297
           SV L  N P KL NP QDL    R+M+    +  V++S D  GG+S+P SR   E SSD 
Sbjct: 241 SVSLGQNHPSKLVNPGQDL---PRTMSVPVRI-TVLSSPDGTGGVSAPWSRMGREGSSDY 296

Query: 298 -ECTTGRSTSQGS-LSSCSSRGVIDVAMIPLIRTEGVSTL--PPSKEDLQ-SSPPSVLDG 352
            +  + RS SQ S  S+CSS       M   +  +G+ +   P +K+ L  SSPPSVL+ 
Sbjct: 297 WDGISKRSPSQASGFSTCSSGD-----MAGEVNEDGLESRASPVAKQALHHSSPPSVLE- 350

Query: 353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
              +N+YDQL QAM EAENSRREAF+E+LRR KAEKDAIE+IRRAK +E  ++EELK R+
Sbjct: 351 ---ENIYDQLEQAMVEAENSRREAFQESLRRSKAEKDAIEAIRRAKEAERSFSEELKLRR 407

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
           + EEAL     ELE ++ +  E+MEEL+I+L+ KSLLE+QIA+S+Q  KELE+KII+AVE
Sbjct: 408 DIEEALQAQGKELESLRNKQQEIMEELKISLNHKSLLENQIADSEQVVKELEEKIIAAVE 467

Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDP 532
           LLQNYKKE+DELQ+ERD A+K AEEL+K   + +S+SH PQ+F++FSF+EIE AT NFDP
Sbjct: 468 LLQNYKKERDELQIERDNAIKTAEELKK---KGASTSHTPQYFAEFSFAEIEKATQNFDP 524

Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           S+KIGEGGYGSIYKG LRH QVAIKMLH  S QGP+EFQQE+DILSK+RHPNLVTL+GAC
Sbjct: 525 SVKIGEGGYGSIYKGCLRHTQVAIKMLHSDSFQGPTEFQQEVDILSKLRHPNLVTLIGAC 584

Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
           PE W L+YEYLPNGSLEDRL+C+DN+PPLSWQ RIRIA ELCSVLIFLHS  P SIVHGD
Sbjct: 585 PEAWALIYEYLPNGSLEDRLNCRDNTPPLSWQARIRIAAELCSVLIFLHSNNPDSIVHGD 644

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           LKP+NILLDANF SKLSDFGI R +S +  SSN+ T+CCRT PKGTFAYMDPEFL+SGEL
Sbjct: 645 LKPSNILLDANFGSKLSDFGICRVISHDGNSSNSATMCCRTGPKGTFAYMDPEFLSSGEL 704

Query: 713 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 772
           T KSDVYSFGIILLRLLTG+PA+GITKEVQ+ALD G L  LLDPLAGDWPFVQA+QLA +
Sbjct: 705 TVKSDVYSFGIILLRLLTGKPAIGITKEVQHALDQGNLNTLLDPLAGDWPFVQAKQLALM 764

Query: 773 AMRCCEMSRKSRPELGKDVWRVLEPMRASCGG-STSYRLGSEERCEPPPYFTCPIFQEVM 831
           A+RCCEM+RKSRP+L  +VWRVLEPM+ SCG  S+S+R+GSEER + PPYF CPIFQE+M
Sbjct: 765 ALRCCEMNRKSRPDLVSEVWRVLEPMKVSCGASSSSFRVGSEERGQIPPYFICPIFQEIM 824

Query: 832 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 887
           QDP VAADGFTYEAEAL+GWLD GH TSPMTNL L H NLVPN ALRSAIQEWLQQ
Sbjct: 825 QDPCVAADGFTYEAEALRGWLDGGHSTSPMTNLKLGHLNLVPNRALRSAIQEWLQQ 880

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772798|emb|CAN67166.1| hypothetical protein VITISV_015820 [Vitis vinifera]

 Score = 1177 bits (3044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/895 (66%), Positives = 713/895 (79%), Gaps = 23/895 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEE-PVASVIEDKIYVAVAKQVKESK 59
           MA+VS VPAI+Q +D VR  +I ++ + SS   IVEE P+A V+EDKI+VAV K+VKESK
Sbjct: 1   MAVVSPVPAISQQLDHVRLHEIGVSAVMSSTGEIVEEQPLALVVEDKIFVAVGKEVKESK 60

Query: 60  SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
           S+L+WALQNSGGKRI I+HVH PAQMIP+MG KFPAS L+E++V+AYR++ERQDMH  L+
Sbjct: 61  SILVWALQNSGGKRISIVHVHQPAQMIPIMGGKFPASKLKEQEVKAYRDLERQDMHKILN 120

Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
             +LICR+ GVRAEKL  ESE+ EKGILELIS +GI+KLV+GAAADKHY ++M++ KSKK
Sbjct: 121 DYILICRKAGVRAEKLYIESENVEKGILELISEHGIKKLVVGAAADKHYSRRMLEPKSKK 180

Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSP-SFQASHNTENRHPNCLRSQ 238
           A  VR +AP  CHIWF+C G+LIYTREGS BG D E+ +P S QAS N E    N  RS 
Sbjct: 181 AAYVRDKAPLFCHIWFVCRGHLIYTREGSXBGADIELRTPPSQQASPNNETGQSNTFRSM 240

Query: 239 SVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSD- 297
           SV L  N   KL NP QDL    R+M+    +  V++S D  GG+S+P SR   E SSD 
Sbjct: 241 SVSLGQNHXSKLVNPGQDL---PRTMSVPVRI-TVLSSPDGTGGVSAPWSRMGREGSSDY 296

Query: 298 -ECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTL--PPSKEDLQ-SSPPSVLDGS 353
            +  + RS SQ S  S  S G     M   +  +G+ +   P +K+ L  SSPPSVL+  
Sbjct: 297 WDGISKRSPSQXSGFSXCSSG----DMAGEVNEDGLESRASPXAKQALHHSSPPSVLE-- 350

Query: 354 VDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
             +N+YDQL QAM EAENSRREAF+E+LRR KAEK AIE+IRRAK +E  ++EELK R++
Sbjct: 351 --ENIYDQLEQAMVEAENSRREAFQESLRRSKAEKXAIEAIRRAKEAERSFSEELKLRRD 408

Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
            EEAL     ELE ++ +  E+MEEL+I+L+ KSLLE+QIA+S+Q  KELE+KIISAVEL
Sbjct: 409 IEEALQAQGKELESLRNKQQEIMEELKISLNHKSLLENQIADSEQVVKELEEKIISAVEL 468

Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPS 533
           LQNYKKE+DELQ+ERD A+K AEEL+K   + +S+SH PQ+F++FSF+EIE AT NFDPS
Sbjct: 469 LQNYKKERDELQIERDNAIKTAEELKK---KGASTSHTPQYFAEFSFAEIEKATQNFDPS 525

Query: 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +KIGEGGYGSIYKG LRH QVAIKMLH  S QGPSEFQQE+DILSK+RHPNLVTL+GACP
Sbjct: 526 VKIGEGGYGSIYKGCLRHTQVAIKMLHSDSFQGPSEFQQEVDILSKLRHPNLVTLIGACP 585

Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
           E W L+YEYLPNGSLEDRL+C+DN+PPLSWQ RIRIA ELCSVLIFLHS  P SIVHGDL
Sbjct: 586 EAWALIYEYLPNGSLEDRLNCRDNTPPLSWQARIRIAAELCSVLIFLHSNNPDSIVHGDL 645

Query: 654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT 713
           KP+NILLDANF SKLSDFGI R +S +  SSN+ T+CCRT PKGTFAYMDPEFL+SGELT
Sbjct: 646 KPSNILLDANFGSKLSDFGICRVISHDGNSSNSATMCCRTGPKGTFAYMDPEFLSSGELT 705

Query: 714 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 773
            KSDVYSFGIILLRLLTG+PA+GITKEVQ+ALD G L  LLDPLAGDWPFVQA+QLA +A
Sbjct: 706 VKSDVYSFGIILLRLLTGKPAIGITKEVQHALDQGNLNTLLDPLAGDWPFVQAKQLALMA 765

Query: 774 MRCCEMSRKSRPELGKDVWRVLEPMRASCGG-STSYRLGSEERCEPPPYFTCPIFQEVMQ 832
           +RC EM+RKSRP+L  +VWRVLEPM+ SCG  S+S+R+GSEER + PPYF CPIFQE+MQ
Sbjct: 766 LRCXEMNRKSRPDLVSEVWRVLEPMKVSCGASSSSFRVGSEERGQIPPYFICPIFQEIMQ 825

Query: 833 DPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 887
           DP VAADGFTYEAEAL+GWLD GH TSPMTNL L H NLVPN ALRSAIQEWLQQ
Sbjct: 826 DPCVAADGFTYEAEALRGWLDGGHSTSPMTNLKLGHLNLVPNRALRSAIQEWLQQ 880

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064033|ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|222843084|gb|EEE80631.1| predicted protein [Populus trichocarpa]

 Score = 1170 bits (3026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/859 (69%), Positives = 677/859 (78%), Gaps = 52/859 (6%)

Query: 30  SRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVM 89
           S R IVEEPVA VIEDKI+VAV K VKE K +LLWALQNSGGKRICIIHV  P+QMIP+M
Sbjct: 3   SGREIVEEPVARVIEDKIFVAVGKSVKECKLMLLWALQNSGGKRICIIHVLQPSQMIPLM 62

Query: 90  GTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILEL 149
           GTKF AS+L+E++V+AYRE+ERQ MH  LD  L ICR+MGVRAEKL  E ES EKGILEL
Sbjct: 63  GTKFRASALKEQEVRAYREVERQAMHKMLDEYLSICRKMGVRAEKLYVEMESIEKGILEL 122

Query: 150 ISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSL 209
           ISH+GI+KLVMGAAADK + K MMD+KSKKAISV  QAPASCHIWFIC G+LI+TREG+L
Sbjct: 123 ISHHGIKKLVMGAAADKRHSKNMMDIKSKKAISVCLQAPASCHIWFICKGHLIHTREGAL 182

Query: 210 DGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRN 269
           DG   ++ S S Q S +TE    + +RSQS+ L  N  +KLTNP QDL  RVRSMN +  
Sbjct: 183 DGTGTDVGSSSQQTSPHTEAGQLSHMRSQSIALGQNHFVKLTNPAQDLVRRVRSMNVNGR 242

Query: 270 VGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRT 329
            G           LS+PAS                                         
Sbjct: 243 GGR----------LSTPAS----------------------------------------P 252

Query: 330 EGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKD 389
           +G  + P S+ D   S     DGS +D LYDQL +AM++AENSRREAFEEA+RR KAEK 
Sbjct: 253 DGGPSTPSSRSDADGSSDEYDDGSTEDPLYDQLEKAMSDAENSRREAFEEAVRRAKAEKY 312

Query: 390 AIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLL 449
           A E+ R+AKASE+LY EE KRRKE EE LA  K ELER+ ++ DEVMEEL+IA DQKSLL
Sbjct: 313 AFEATRKAKASENLYTEESKRRKEVEEELAKEKEELERINRECDEVMEELRIAEDQKSLL 372

Query: 450 ESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSS 509
           E QI ESDQ  KELEQKIISAV LLQNYKKEQDELQ ERD A+KE EELR+S+ EAS + 
Sbjct: 373 EKQIKESDQMVKELEQKIISAVGLLQNYKKEQDELQKERDNALKEVEELRRSQTEASGT- 431

Query: 510 HMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE 569
           HM QFFS+FS SEIE AT +FDPSLKIGEGGYGSIYKG+LR  QVA+KMLH +SLQGP+E
Sbjct: 432 HMSQFFSEFSLSEIEEATQHFDPSLKIGEGGYGSIYKGVLRQTQVAVKMLHSNSLQGPAE 491

Query: 570 FQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI 629
           FQQE+D+LSK+RHPNL+TL+GACPE WTL+YEYLPNGSLEDRLSC+DNSPPLSWQTRIRI
Sbjct: 492 FQQEVDVLSKMRHPNLITLIGACPEAWTLIYEYLPNGSLEDRLSCRDNSPPLSWQTRIRI 551

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A ELCSVLIFLHS K HSIVHGDLKPANILLD NFV+KLSDFGI R L   E SSNNT +
Sbjct: 552 AAELCSVLIFLHSSKQHSIVHGDLKPANILLDENFVTKLSDFGICRLLHHKEGSSNNTAI 611

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 749
           C RTDPKGTF+YMDPEFL++GELTPKSDVYSFGIILLRLLT R  LGITKEVQ  LD G 
Sbjct: 612 C-RTDPKGTFSYMDPEFLSTGELTPKSDVYSFGIILLRLLTARQPLGITKEVQCELDKGN 670

Query: 750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYR 809
           LK LLDPLAGDWPFVQAEQLA+LA+RCCEMSRK+RP+L  +VWRVLEPM+ASCGGS+ ++
Sbjct: 671 LKTLLDPLAGDWPFVQAEQLAHLALRCCEMSRKNRPDLLSEVWRVLEPMKASCGGSSFFQ 730

Query: 810 LGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHK 869
           LGSEE  +PP YF CPIFQEVM+DPHVAADG+TYEAEALKGWLDSGH+TSPMTNL LAH+
Sbjct: 731 LGSEEHFQPPSYFICPIFQEVMRDPHVAADGYTYEAEALKGWLDSGHDTSPMTNLKLAHR 790

Query: 870 NLVPNLALRSAIQEWLQQH 888
           +L+PN ALRSAIQEWLQQ 
Sbjct: 791 DLIPNRALRSAIQEWLQQQ 809

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568394|ref|XP_003552396.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]

 Score = 1118 bits (2893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/897 (64%), Positives = 689/897 (76%), Gaps = 23/897 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
           MA+VS +PA  Q + SVR        ++ +    +EEP  SV++  IYVAV K+VKES+ 
Sbjct: 1   MAVVSPMPATTQRMGSVR-------SLSDAGGKFLEEPNPSVVDQPIYVAVTKEVKESRL 53

Query: 61  VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
            L+WA+QNSGGKRICI++VH  A M+P++G KFPAS+L+EE+VQAY E ERQ MH  LD 
Sbjct: 54  NLIWAIQNSGGKRICILYVHVRATMVPLLGGKFPASALKEEQVQAYWEEERQGMHRILDD 113

Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
            L IC++MGVRAEKL  E +S EKGILELIS +GI+KLVMGAA+DK+Y ++MMDLKSKKA
Sbjct: 114 YLRICQRMGVRAEKLHIEMDSIEKGILELISQHGIQKLVMGAASDKYYNRRMMDLKSKKA 173

Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
           ISV +QAPASCHI F+C G LI+TR+ S +  + +++SP  Q   N+       LRSQSV
Sbjct: 174 ISVCKQAPASCHIQFVCKGRLIHTRDRSSNEGNADVTSPLVQQVPNS----VRSLRSQSV 229

Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMT--SQDSIGGLSSPASRSDAEVSSDE 298
            L  +R   LTNP  +LF RVRS N D +  + MT  S +   G S+P  R   EVSSDE
Sbjct: 230 TLGQDRRANLTNPALELFRRVRSAN-DGHGASFMTVSSPEDTEGFSTPHDRMGTEVSSDE 288

Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPSK---EDLQ-SSPPSVLD 351
                  S   LS+CS   V ++A  P +    +E    L  S+   EDL  SSPPS LD
Sbjct: 289 SDRLSRMSPSGLSTCSDSAV-ELAFTPSLINESSENALELTLSRRIIEDLHYSSPPSTLD 347

Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
           G +DD +Y+QL QA AEAEN+   A++E +RR KAEKDA E+IR+ KASESLY EEL  R
Sbjct: 348 GGMDDTIYEQLEQARAEAENATLNAYQETVRRRKAEKDAFEAIRKVKASESLYTEELNLR 407

Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
           K  EE L   K ELE MK   D+V EEL +ALDQK  LESQIA S+   KELEQKI+SAV
Sbjct: 408 KMTEEKLRKEKEELESMKSLRDKVKEELCLALDQKESLESQIASSELMVKELEQKILSAV 467

Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFD 531
           +LLQ+YK E+DELQM+RD A++EAEELRK + EAS + ++PQ FS+FSFSEI+ AT NF+
Sbjct: 468 DLLQSYKNERDELQMQRDNALREAEELRKKQGEASGT-NVPQLFSEFSFSEIKEATSNFN 526

Query: 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           PS KIGEGGYGSI+KG+LRH +VAIKML+  S+QGP EFQQE+D+LSK+RHPNL+TL+GA
Sbjct: 527 PSSKIGEGGYGSIFKGVLRHTEVAIKMLNSDSMQGPLEFQQEVDVLSKLRHPNLITLIGA 586

Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           CP+ W LVYEYLPNGSLEDRL+CK+N+PPLSWQ RIRIA ELCS LIFLHS KPHS+VHG
Sbjct: 587 CPDSWALVYEYLPNGSLEDRLACKNNTPPLSWQARIRIAAELCSALIFLHSSKPHSVVHG 646

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DLKP+NILLDAN +SKLSDFGI R LS  E SS+NTT   RTDPKGTF YMDPEFLASGE
Sbjct: 647 DLKPSNILLDANLISKLSDFGICRILSNCESSSSNTTEFWRTDPKGTFVYMDPEFLASGE 706

Query: 712 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 771
           LTPKSDVYSFGIILLRLLTGRPALGITKEV+YALDTGKLK+LLDPLAGDWPFVQAEQLA 
Sbjct: 707 LTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLKSLLDPLAGDWPFVQAEQLAR 766

Query: 772 LAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVM 831
           LA+RCC+M+RKSRP+L  DVWRVL+ MR S GG+ S+ L SE   +PP YF CPIFQEVM
Sbjct: 767 LALRCCDMNRKSRPDLYSDVWRVLDAMRVSSGGANSFGLSSEGLLQPPSYFICPIFQEVM 826

Query: 832 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           +DPHVAADGFTYEAEA++GWLD GH+ SPMTN  LAH NLVPN ALRSAIQ+WLQ H
Sbjct: 827 RDPHVAADGFTYEAEAIRGWLDGGHDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 883

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127680|ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|222860907|gb|EEE98449.1| predicted protein [Populus trichocarpa]

 Score = 1115 bits (2884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/864 (66%), Positives = 660/864 (76%), Gaps = 68/864 (7%)

Query: 29  SSRRGIVEEPVA---SVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQM 85
           +S R +VEE VA    VIE+KI+VAV K VKE KS+L WALQ SGGKRICIIHVH PAQM
Sbjct: 2   ASGREVVEETVARVIEVIEEKIFVAVGKSVKECKSMLFWALQKSGGKRICIIHVHQPAQM 61

Query: 86  IPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKG 145
           IP MGTKFPAS L+E++V+AY EIERQ+M   L   L +CR+MGVRAEKL  E ES EKG
Sbjct: 62  IPFMGTKFPASKLKEQEVRAYWEIERQEMLKMLGEYLFLCRKMGVRAEKLYVEMESIEKG 121

Query: 146 ILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTR 205
           ILELIS +GIRKLVMGAAADK Y K MMD+KSKKA+SV  QAPASCHIWFIC G+LI TR
Sbjct: 122 ILELISQHGIRKLVMGAAADKRYSKNMMDIKSKKAVSVCLQAPASCHIWFICKGHLIQTR 181

Query: 206 EGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMN 265
           +G+LDG D ++   S Q S NTE    N +RSQS++   +  +KLTNP QDLF ++  + 
Sbjct: 182 KGALDGTDTDVRPSSQQKSPNTEAGQSNIMRSQSILFGQHHHVKLTNPAQDLFRKMEGLQ 241

Query: 266 FDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIP 325
             R  G + T                                               +I 
Sbjct: 242 LHR--GQMQTG---------------------------------------------VLIN 254

Query: 326 LIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGK 385
           ++R +GV  LP     +Q S     DGS++D LYDQL QAMAEAENSR EA EEA+R  K
Sbjct: 255 MMRYQGV--LP----KIQFSHH---DGSIEDPLYDQLEQAMAEAENSRFEASEEAVRCAK 305

Query: 386 AEKDAIESIRRAKASESLYAEELKRR-------KEFEEALANGKLELERMKKQHDEVMEE 438
            E+D +E+IR+AKASESLY EE KRR        + +E L     ELE++ K+ DEVM E
Sbjct: 306 EERDVVEAIRKAKASESLYTEESKRRTVVEEELAKEKEELEKINKELEKINKEQDEVMGE 365

Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
           L IA D KSLLE QI ESD+  KELEQKIISAV LLQNYKKE+D L   RD A+KEAEEL
Sbjct: 366 LCIAQDHKSLLEKQIEESDEMVKELEQKIISAVGLLQNYKKERDHLHKGRDYALKEAEEL 425

Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKM 558
           R+++ EASS+ HMP+FFSDFSFSEIE ATH+FDPS KIGEGGYG+IYKG+LR  QVA+KM
Sbjct: 426 RRNQTEASST-HMPRFFSDFSFSEIEEATHHFDPSRKIGEGGYGNIYKGVLRQTQVAVKM 484

Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNS 618
           L  +S+QGP+EFQQE+++LSK+RHPNL+TLVGACPE WTL+YEYLPNGSLEDRLSCKDNS
Sbjct: 485 LDSNSMQGPAEFQQEVNVLSKMRHPNLITLVGACPEAWTLIYEYLPNGSLEDRLSCKDNS 544

Query: 619 PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 678
           PPLSWQTRIRIATELCSVLIFLHS KPHSIVHGDLKPANILLD NFV+KLSDFGI R L 
Sbjct: 545 PPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDENFVTKLSDFGICRLLD 604

Query: 679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 738
             E SSNNTT+C RTDPKGTF YMDPEF+++GEL+PKSDVYSFGIILLRLLT R ALGIT
Sbjct: 605 HKEGSSNNTTIC-RTDPKGTFVYMDPEFVSTGELSPKSDVYSFGIILLRLLTARQALGIT 663

Query: 739 KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
           KEV+YALD G LK LLDPLAGDWPFVQAE LA++A+RCCEM+RK+RP+L  +VWRVLEPM
Sbjct: 664 KEVRYALDKGTLKTLLDPLAGDWPFVQAEMLAHMALRCCEMNRKNRPDLASEVWRVLEPM 723

Query: 799 RASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHET 858
           +ASCG S+  +LGSEE  +PP YFTCPIFQEVM+DPHVAADGFTYEAEALKGWLDSGH+T
Sbjct: 724 KASCGTSSFSQLGSEEHFQPPSYFTCPIFQEVMRDPHVAADGFTYEAEALKGWLDSGHDT 783

Query: 859 SPMTNLPLAHKNLVPNLALRSAIQ 882
           SPMTN  LAH +L+PN ALRSAIQ
Sbjct: 784 SPMTNFKLAHCDLIPNRALRSAIQ 807

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|87240964|gb|ABD32822.1| Protein kinase; U box [Medicago truncatula]

 Score = 1112 bits (2875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/898 (64%), Positives = 694/898 (77%), Gaps = 24/898 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
           MA+VSS+PA  Q   SV       + +   R  I EEP   V+++ I VAV+K VKESK 
Sbjct: 1   MAVVSSMPATIQRTGSV-------SSVRDVRGEIEEEPNQIVVDEVICVAVSKDVKESKL 53

Query: 61  VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
            L+WA+QNSGGK+ICI+ VH PA MIP+MG KFPASSL++++V+AYRE+ERQ++H  LD 
Sbjct: 54  NLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVRAYREMERQNVHKTLDE 113

Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
            L IC++MGVRAEKL  E E+ EKGI+ELIS +GIRKL+MGAA+DK+Y ++MMDL+S+KA
Sbjct: 114 YLRICQRMGVRAEKLHIEMENIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKA 173

Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
           I V +QAP+SCHI FIC G+LI+TR+ SLD  + E++SP  Q   N+    P+  RSQS+
Sbjct: 174 IYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQGPNSV--RPS--RSQSI 229

Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIG--GLSSPASRSDAEVSSDE 298
            L  N      +  Q+LF RVRS N D    ++ T+   +   G S+P +R   EVSSDE
Sbjct: 230 TLGQNHRTNSISSSQELFRRVRSAN-DGMTASITTNSSPVDNEGFSTPRNRRGTEVSSDE 288

Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPS----KEDLQS-SPPSVL 350
                 TS   LS+ S    ID  + P       E  S L  S     EDL+  SPPSVL
Sbjct: 289 SDRLSRTSPSGLSTFSD-STIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVL 347

Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
           DG V+D LYDQL QAM+EA N+ R A++E  RRGKAEKDAIE+IRRAKASESLY +EL  
Sbjct: 348 DGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNL 407

Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
           RK  EE L   K ELE +  Q D+V EEL++A+D KS LESQ+A S+   +ELEQKIISA
Sbjct: 408 RKMAEEELRKEKEELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISA 467

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
           VELLQ+YK E+DELQ++RD A++EAE+LRK + E SS+ H+PQ FS+FSFSEIE AT NF
Sbjct: 468 VELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSST-HVPQLFSEFSFSEIEEATSNF 526

Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +PSLKIGEGGYG+IYKGLLRH +VAIK+LH +S+QGP EFQQE+D+LSK+RHPNL+TL+G
Sbjct: 527 NPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIG 586

Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           ACPE W+LVYEYLPNGSLEDRL+CKDN+ PLSWQTRIRIA ELCS LIFLHS KPHSIVH
Sbjct: 587 ACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVH 646

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           GDLKP+NI+LD N VSKLSDFGI R LS  E SSNN T   +TDPKGTF YMDPEFLASG
Sbjct: 647 GDLKPSNIILDGNLVSKLSDFGICRVLSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASG 706

Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 770
           ELTPKSDVYSFGIILLRLLTGRPALGITKEV+YA+DTGKL +LLDPLAGDWPFVQAEQLA
Sbjct: 707 ELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLA 766

Query: 771 NLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEV 830
            LA+RCCEM+RKSRP+L  DVWR+L+ MRAS GG+ S+ L SE   +PP YF CPIFQEV
Sbjct: 767 RLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEV 826

Query: 831 MQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           M+DPHVAADGFTYEAEA++GWLDSGH+ SPMTN  L+H+NLVPN ALRSAIQ+WLQ H
Sbjct: 827 MRDPHVAADGFTYEAEAIRGWLDSGHDASPMTNSTLSHQNLVPNRALRSAIQDWLQSH 884

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507363|ref|XP_003623970.1| U-box domain-containing protein [Medicago truncatula] gi|355498985|gb|AES80188.1| U-box domain-containing protein [Medicago truncatula]

 Score = 1111 bits (2874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/898 (64%), Positives = 694/898 (77%), Gaps = 24/898 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
           MA+VSS+PA  Q   SV       + +   R  I EEP   V+++ I VAV+K VKESK 
Sbjct: 13  MAVVSSMPATIQRTGSV-------SSVRDVRGEIEEEPNQIVVDEVICVAVSKDVKESKL 65

Query: 61  VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
            L+WA+QNSGGK+ICI+ VH PA MIP+MG KFPASSL++++V+AYRE+ERQ++H  LD 
Sbjct: 66  NLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVRAYREMERQNVHKTLDE 125

Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
            L IC++MGVRAEKL  E E+ EKGI+ELIS +GIRKL+MGAA+DK+Y ++MMDL+S+KA
Sbjct: 126 YLRICQRMGVRAEKLHIEMENIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKA 185

Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
           I V +QAP+SCHI FIC G+LI+TR+ SLD  + E++SP  Q   N+    P+  RSQS+
Sbjct: 186 IYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQGPNSV--RPS--RSQSI 241

Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIG--GLSSPASRSDAEVSSDE 298
            L  N      +  Q+LF RVRS N D    ++ T+   +   G S+P +R   EVSSDE
Sbjct: 242 TLGQNHRTNSISSSQELFRRVRSAN-DGMTASITTNSSPVDNEGFSTPRNRRGTEVSSDE 300

Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPS----KEDLQS-SPPSVL 350
                 TS   LS+ S    ID  + P       E  S L  S     EDL+  SPPSVL
Sbjct: 301 SDRLSRTSPSGLSTFSD-STIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVL 359

Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
           DG V+D LYDQL QAM+EA N+ R A++E  RRGKAEKDAIE+IRRAKASESLY +EL  
Sbjct: 360 DGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNL 419

Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
           RK  EE L   K ELE +  Q D+V EEL++A+D KS LESQ+A S+   +ELEQKIISA
Sbjct: 420 RKMAEEELRKEKEELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISA 479

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
           VELLQ+YK E+DELQ++RD A++EAE+LRK + E SS+ H+PQ FS+FSFSEIE AT NF
Sbjct: 480 VELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSST-HVPQLFSEFSFSEIEEATSNF 538

Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +PSLKIGEGGYG+IYKGLLRH +VAIK+LH +S+QGP EFQQE+D+LSK+RHPNL+TL+G
Sbjct: 539 NPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIG 598

Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           ACPE W+LVYEYLPNGSLEDRL+CKDN+ PLSWQTRIRIA ELCS LIFLHS KPHSIVH
Sbjct: 599 ACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVH 658

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           GDLKP+NI+LD N VSKLSDFGI R LS  E SSNN T   +TDPKGTF YMDPEFLASG
Sbjct: 659 GDLKPSNIILDGNLVSKLSDFGICRVLSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASG 718

Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 770
           ELTPKSDVYSFGIILLRLLTGRPALGITKEV+YA+DTGKL +LLDPLAGDWPFVQAEQLA
Sbjct: 719 ELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLA 778

Query: 771 NLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEV 830
            LA+RCCEM+RKSRP+L  DVWR+L+ MRAS GG+ S+ L SE   +PP YF CPIFQEV
Sbjct: 779 RLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEV 838

Query: 831 MQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           M+DPHVAADGFTYEAEA++GWLDSGH+ SPMTN  L+H+NLVPN ALRSAIQ+WLQ H
Sbjct: 839 MRDPHVAADGFTYEAEAIRGWLDSGHDASPMTNSTLSHQNLVPNRALRSAIQDWLQSH 896

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531997|ref|XP_003534561.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/897 (63%), Positives = 684/897 (76%), Gaps = 23/897 (2%)

Query: 1   MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
           MA+VS VPA  Q + SVR        ++ +   I+EEP   V++  IYVAV K+VKESK 
Sbjct: 1   MAVVSPVPATTQRMGSVRL-------LSDAGGEILEEPNPRVVDQPIYVAVTKEVKESKL 53

Query: 61  VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
            L+WA+Q SGGKRICI++VH  A MIP++G KFPAS+L+EE+V+AY E ERQ MH  LD 
Sbjct: 54  NLIWAIQTSGGKRICILYVHVRATMIPLLGGKFPASTLKEEQVEAYWEEERQGMHGILDE 113

Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
            L IC++MGVRAEKL  E +S EKGILELIS +GIRKLVMGAA+DK+Y ++MMDLKSKKA
Sbjct: 114 YLCICQRMGVRAEKLHIEMDSIEKGILELISQHGIRKLVMGAASDKYYNRRMMDLKSKKA 173

Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
           +SV +QAPASCHI F+C G+LI+TR+ S D  + E++SP  Q   N+       LRS S+
Sbjct: 174 VSVCKQAPASCHIQFVCKGHLIHTRDRSSDEGNAEVASPLVQQVPNS----LKSLRSLSI 229

Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVM--TSQDSIGGLSSPASRSDAEVSSDE 298
            L  +    +TNP  +LF RVRS N D +  + M  +S +   GLS+P  R   EVSSDE
Sbjct: 230 TLGQDCQANITNPALELFRRVRSAN-DGHGASFMAVSSPEDTEGLSTPRDRMGTEVSSDE 288

Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPSK---EDLQ-SSPPSVLD 351
                  S   LS+CS   V ++A+ P +    +E    L  S    EDL  SSPPS LD
Sbjct: 289 SDRLSRMSPSGLSTCSDSAV-ELALTPSLINESSENALELTLSHLIIEDLHHSSPPSTLD 347

Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
           G +DD +YDQL QA AEAEN+   A++E +RR KAEKDA E+IR+ KASESLYAEEL +R
Sbjct: 348 GGMDDTIYDQLEQARAEAENATLNAYQETVRRMKAEKDAFEAIRKIKASESLYAEELNQR 407

Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
           K  EE L   K ELE MK   D V EEL++ALDQK+ LESQIA ++   KELEQKI+SAV
Sbjct: 408 KMAEEKLRKEKEELENMKSLRDTVKEELRLALDQKASLESQIASTELMIKELEQKILSAV 467

Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFD 531
            LLQ+YK E+DELQM+ D A++EAEELRK + EAS + H+PQ  S+FSFSEI+ AT NF+
Sbjct: 468 GLLQSYKNERDELQMQCDNALREAEELRKKQGEASGT-HVPQLCSEFSFSEIKEATSNFN 526

Query: 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           PS KIGEGGYGSI+KG+L H +VAIKML+  S+QGP EFQQE+D+LSK+RHPNL+TL+GA
Sbjct: 527 PSSKIGEGGYGSIFKGVLHHTEVAIKMLNSDSMQGPLEFQQEVDVLSKLRHPNLITLIGA 586

Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           CP+ W LVYEYLPNGSLEDRL+CKDN+PPLSWQ RIRIA ELCS LIFLHS KPHS+VHG
Sbjct: 587 CPDSWALVYEYLPNGSLEDRLACKDNTPPLSWQARIRIAAELCSALIFLHSSKPHSVVHG 646

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DLKP+NILLDAN +SKLSDFGI R LS  E S +NTT   RTDPKGTF YMDPEFLASGE
Sbjct: 647 DLKPSNILLDANLISKLSDFGICRILSNCESSGSNTTEFWRTDPKGTFVYMDPEFLASGE 706

Query: 712 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 771
           LTPKSDVYSFGIILLRLLTGRPALGIT EV+YALDTGKLK+LLDPLAGDWPFVQAEQLA 
Sbjct: 707 LTPKSDVYSFGIILLRLLTGRPALGITMEVKYALDTGKLKSLLDPLAGDWPFVQAEQLAR 766

Query: 772 LAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVM 831
           LA+RCC+M+RKSRP+L  DVWR+L+ MR S GG+ S+ L SE   + P YF CPIFQEVM
Sbjct: 767 LALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGANSFGLSSEGLLQSPSYFICPIFQEVM 826

Query: 832 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           +DPHVAADGFTYEAEA++GWLD GH+ SPMTN  LAH NLVPN ALRSAIQ+WLQ H
Sbjct: 827 RDPHVAADGFTYEAEAIRGWLDGGHDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 883

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522608|ref|XP_003529938.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]

 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/899 (62%), Positives = 672/899 (74%), Gaps = 31/899 (3%)

Query: 1   MALVSSVPAIAQGVDSVRC-PDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESK 59
           MA+VSS+PA    V+ V    DI + GI +SRR IV +P  S++ D IYVAV K VK SK
Sbjct: 1   MAMVSSMPATPPQVNPVNSLRDIGVPGIMTSRRKIVNKPSPSMVNDTIYVAVGKNVKSSK 60

Query: 60  SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
           S L+WA+QNSGG+RICI+HVH PA MIP+MG KFPAS+L EE+VQ Y E ER  M+  LD
Sbjct: 61  SNLIWAIQNSGGRRICILHVHVPAPMIPLMGAKFPASALREEEVQDYHETERLKMYKTLD 120

Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
             L IC+ MGVRA KL  E +  EKGI+ELIS YGI+KLVMGAA+DK++ ++M   +SKK
Sbjct: 121 AYLSICQGMGVRAGKLQIEMDCIEKGIVELISQYGIQKLVMGAASDKYHSRRMTAPRSKK 180

Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQS 239
           AI V +QAPASCHI FICNG LI+TR+ SLD  + E++ P  Q   N+E      LRSQS
Sbjct: 181 AIYVCEQAPASCHIQFICNGYLIHTRDCSLDIGNVEVAFPMAQQMANSEVGGSPKLRSQS 240

Query: 240 VVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDEC 299
           +V   N  +KLTNP Q+LF RVRS+N               G   S AS SD        
Sbjct: 241 IVQGQNHGIKLTNPAQELFRRVRSVN--------------DGHRRSLASVSDESYGQ--- 283

Query: 300 TTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVST---------LPPSKEDLQSSPPSVL 350
            +GRS S    S CS    ++  + P + ++G               +K    S+ PS +
Sbjct: 284 -SGRSPS--VFSMCSHSISVEPGLTPNLISDGSENELDLTLNGPFLINKNLHHSASPSEM 340

Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
           DG +DD LYDQL QAMAEA NS+R+A++E +RRG AEK+AI++IRRAK +E+LY EELK 
Sbjct: 341 DGGMDDALYDQLEQAMAEAVNSKRDAYQETVRRGNAEKNAIDAIRRAKTTENLYKEELKL 400

Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
           RKE EEA+     +L  MK Q D+V EEL++AL Q S LE+QIA ++   KELEQKIISA
Sbjct: 401 RKEQEEAVEKANEKLNNMKSQTDKVNEELRLALFQNSSLENQIASTELMIKELEQKIISA 460

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
             LLQNYK E D+LQ++RD AV EAEE R+ + EASSS+H  Q FS+FSF EI+ AT NF
Sbjct: 461 ENLLQNYKDELDDLQIQRDIAVGEAEEFRRKQWEASSSAHKLQCFSEFSFQEIKEATSNF 520

Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +PS KIGEGGYGSI+KG+LRH +VAIKML+  S QGP EFQQE+++LSK+RHPN++TL+G
Sbjct: 521 NPSQKIGEGGYGSIFKGILRHAEVAIKMLNRDSTQGPEEFQQEVEVLSKLRHPNIITLIG 580

Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           ACPE WTLVYEYLPNGSLEDRL+CKDNSPPLSWQTRIRIATELCS LIFLHS KPHSI H
Sbjct: 581 ACPESWTLVYEYLPNGSLEDRLNCKDNSPPLSWQTRIRIATELCSALIFLHSNKPHSIAH 640

Query: 651 GDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           GDLKPANILLDAN VSKLSDFGI R  LS  + SSN+TT   RTDPKGTF Y+DPEFLAS
Sbjct: 641 GDLKPANILLDANLVSKLSDFGICRILLSCQDSSSNSTTQFWRTDPKGTFVYLDPEFLAS 700

Query: 710 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 769
           GELTPKSDVYSFGIILLRL+TG+PALGI KEVQYALD GKLK++LDP AGDWPF+ AE+L
Sbjct: 701 GELTPKSDVYSFGIILLRLMTGKPALGIIKEVQYALDAGKLKSILDPFAGDWPFMLAEEL 760

Query: 770 ANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQE 829
             LA+RCCEM+RKSRP+L  DVWR+LEPMRAS G + +++LGS+  C+PPPYF CPIF E
Sbjct: 761 VRLALRCCEMNRKSRPDLYPDVWRILEPMRASSGVTNTFQLGSQGLCQPPPYFICPIFLE 820

Query: 830 VMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           VMQDPHVAADGFTYEAEA++ WL+SGH+TSP TN  LAH++LVPN  LR AIQ WLQ H
Sbjct: 821 VMQDPHVAADGFTYEAEAIREWLESGHDTSPRTNSKLAHRHLVPNHTLRHAIQNWLQSH 879

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506214|ref|XP_003521882.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]

 Score = 1060 bits (2742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/894 (61%), Positives = 665/894 (74%), Gaps = 23/894 (2%)

Query: 1   MALVSSVPAIAQGVDSVRC-PDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESK 59
           MA+VS +PA    V+ V    +  + GI +SRR IV EP  S++ + IYVAVAK VK+SK
Sbjct: 1   MAVVSPMPATPPQVNPVNLLRNTGVPGIMTSRREIVNEPSPSMVNETIYVAVAKDVKDSK 60

Query: 60  SVLLWALQNSGGKRICIIHVHTPAQMIPV--MGTKFPASSLEEEKVQAYREIERQDMHNH 117
             L+WA+QNSGG+RICI+HVH PA MIP+  MG KFPAS+L EE VQ Y E ER  MH  
Sbjct: 61  LNLIWAIQNSGGRRICILHVHVPAPMIPLALMGAKFPASALREEGVQDYHERERLKMHKT 120

Query: 118 LDMCLLICRQMGVRAEKL-DTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLK 176
           LD  L IC++MGVRA KL   E +  EKGI+ELIS YGI+KLVMGAA+DK++ ++M  L+
Sbjct: 121 LDAYLFICQRMGVRARKLLHIEMDCIEKGIVELISRYGIQKLVMGAASDKYHSRRMTSLR 180

Query: 177 SKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLR 236
           SKKAI V +QAPASCHI FICNG LI+TR+ SL+  + E+  P  Q   N+E  H   L 
Sbjct: 181 SKKAIYVCEQAPASCHIQFICNGYLIHTRDCSLNRGNVEVEFPLLQQMANSEVGHSPNLS 240

Query: 237 SQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSS 296
            QS++   N  +KLTNP Q+LF RVRS+N D ++ ++ +   S G L+ P+  S    S 
Sbjct: 241 FQSILQGQNHGIKLTNPAQELFRRVRSVN-DGHMRSLESVSSSEGFLTPPSKFSKNISSI 299

Query: 297 DECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPP--SKEDLQSSPPSVLDGSV 354
           +   T    + GS         +D+ +            P   +K+   SS PSVLD  +
Sbjct: 300 EPGLTPNLINDGS------ENALDLIL----------NYPSLINKDLHHSSSPSVLDEGM 343

Query: 355 DDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF 414
           DD LY QL Q MAEA N+RR+A++E +RR KAEKDAI++I RAKA+E+LY EELK RKE 
Sbjct: 344 DDALYYQLEQVMAEASNARRDAYQETVRRSKAEKDAIDAIHRAKATENLYKEELKLRKEQ 403

Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
           EEA+     +L  MK Q D+V EEL++ALDQ S LE+QIA ++   KEL+QKIISA++LL
Sbjct: 404 EEAVEKANEKLNNMKSQTDKVNEELRLALDQNSSLENQIASTELMVKELKQKIISALDLL 463

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSL 534
           QNYK E D+LQ++RD AV EAEE R  + EASSS+     FSDFSF EI+ AT NF+PS 
Sbjct: 464 QNYKDELDDLQIQRDNAVGEAEEFRSKQGEASSSAQELHCFSDFSFQEIKEATSNFNPSK 523

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
           KIGEGGYGSI+KG+LRH +VAIKML+P S QGP EFQQE+++LSK+RHPNL+TL+GAC E
Sbjct: 524 KIGEGGYGSIFKGVLRHTEVAIKMLNPDSTQGPLEFQQEVEVLSKLRHPNLITLIGACAE 583

Query: 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654
            WTLVYEYLPNGSLEDRL+ KDN+PPLSWQTRI IA ELCS L FLHS KPHSI HGDLK
Sbjct: 584 SWTLVYEYLPNGSLEDRLNRKDNTPPLSWQTRICIAAELCSALNFLHSNKPHSIAHGDLK 643

Query: 655 PANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTP 714
           PANILLDAN VSKLSDFGI R LS  + SSN+TT   RT PKGTF Y+DPEFLASGELTP
Sbjct: 644 PANILLDANLVSKLSDFGICRILSCQDSSSNSTTQFWRTVPKGTFVYVDPEFLASGELTP 703

Query: 715 KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 774
           KSDVYSFGIILLRL+TG+PALGI KEVQYALD GKLK++LDPLAG+WPF+ AE+L  LA+
Sbjct: 704 KSDVYSFGIILLRLMTGKPALGIIKEVQYALDAGKLKSILDPLAGEWPFMLAEELIRLAL 763

Query: 775 RCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDP 834
           RCCEM+RK+RPEL  DVWR+LEPMRAS   + + +LGS+  C+PPPYF CPIF EVMQDP
Sbjct: 764 RCCEMNRKNRPELYSDVWRILEPMRASSVVTNTSQLGSQRLCQPPPYFICPIFLEVMQDP 823

Query: 835 HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
           HVA+DGFTYEAEA++ WL+SG +TSP TN  LAH+NLVPN ALR AIQ WLQ H
Sbjct: 824 HVASDGFTYEAEAIREWLESGRDTSPRTNSKLAHRNLVPNHALRHAIQNWLQSH 877

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	888
TAIR|locus:2050669	834	AT2G45910 [Arabidopsis thalian	0.603	0.642	0.667	3.6e-192
TAIR|locus:2101353	805	AT3G49060 [Arabidopsis thalian	0.570	0.629	0.447	1.8e-146
TAIR|locus:2117343	835	AT4G25160 [Arabidopsis thalian	0.626	0.665	0.369	7.2e-107
TAIR|locus:2176177	819	AT5G51270 [Arabidopsis thalian	0.581	0.630	0.384	1.5e-102
TAIR|locus:2151641	796	AT5G61560 [Arabidopsis thalian	0.522	0.582	0.414	3.1e-102
TAIR|locus:504954932	789	AT5G57035 [Arabidopsis thalian	0.572	0.643	0.366	4.4e-99
UNIPROTKB|Q0DR28	518	PUB57 "U-box domain-containing	0.525	0.901	0.41	6.3e-92
TAIR|locus:2047605	801	AT2G19410 [Arabidopsis thalian	0.564	0.625	0.359	2.3e-88
TAIR|locus:2128131	764	AT4G31230 [Arabidopsis thalian	0.510	0.592	0.404	3.1e-87
TAIR|locus:2143094	701	AT5G12000 [Arabidopsis thalian	0.484	0.613	0.387	1.9e-85

TAIR|locus:2050669 AT2G45910 [Arabidopsis thaliana (taxid:3702)]

 Score = 1862 (660.5 bits), Expect = 3.6e-192, P = 3.6e-192
 Identities = 364/545 (66%), Positives = 441/545 (80%)

Query:   344 SSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESL 403
             SSP S  DG VDD+   ++ +A +EA +S++EAF E LRR KAEK+A+++IRRAK SES 
Sbjct:   298 SSPSSFPDG-VDDSFNVKIRKATSEAHSSKQEAFAETLRRQKAEKNALDAIRRAKQSESA 356

Query:   404 YAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKEL 463
             Y+EELKRRK+ E A+A  K     +K + + +MEELQ A+ QK++LESQIA+SD T ++L
Sbjct:   357 YSEELKRRKDTEIAVAKEKERFITIKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKL 416

Query:   464 EQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEI 523
              QK+  AV+LLQ  + E++ELQ ERD+A++EAEELR S  E +S+  +PQ+F+DFSFSEI
Sbjct:   417 NQKLDIAVKLLQKLRDEREELQTERDRALREAEELR-SHAE-TSTLQLPQYFTDFSFSEI 474

Query:   524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
             E AT++FD +LKIGEGGYGSIY GLLRH QVAIKML+P+S QGP E+QQE+D+LSK+RHP
Sbjct:   475 EEATNHFDSTLKIGEGGYGSIYVGLLRHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHP 534

Query:   584 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             N++TL+GACPE W+LVYEYLP GSLEDRL+CKDNSPPLSWQ R+RIATE+C+ L+FLHS 
Sbjct:   535 NIITLIGACPEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSN 594

Query:   644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             K HS+VHGDLKPANILLD+N VSKLSDFG    L  N   S       RTD  GT AY+D
Sbjct:   595 KAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKS------VRTDVTGTVAYLD 648

Query:   704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 763
             PE  +SGELTPKSDVYSFGIILLRLLTGRPAL I+ EV+YALD G L +LLDPLAGDWPF
Sbjct:   649 PEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPF 708

Query:   764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFT 823
             VQAEQLA LA+RCCE   ++RP+LG +VWRVLEPMRAS GGS+S+ LG  E    PPYF 
Sbjct:   709 VQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFI 768

Query:   824 CPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQE 883
             CPIFQEVMQDPHVAADGFTYEAEA++ WLDS H+TSPMTN+ L+H +L+ N ALRSAIQE
Sbjct:   769 CPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQE 828

Query:   884 WLQQH 888
             WLQ H
Sbjct:   829 WLQHH 833

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2101353 AT3G49060 [Arabidopsis thaliana (taxid:3702)]

 Score = 1160 (413.4 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
 Identities = 236/527 (44%), Positives = 357/527 (67%)

Query:   364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
             +AM +   S R  + EA ++ + +    E++ +AKA E L  +E  +RK  EE L   KL
Sbjct:   295 KAMHDIGQSDRTVYGEAGKKWEEDASTTEALCKAKALEGLCIKESSQRKRLEELLEKEKL 354

Query:   424 ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDE 483
             E++ + +Q++  M+ELQ+   +   LESQ+ +     KE  +K  +A+ELL+++++++DE
Sbjct:   355 EVKMVIEQNNGFMKELQMVQGRNLKLESQMRKLQDLEKEHGEKFDTAMELLKSFRQKRDE 414

Query:   484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
             ++++ + AVKE   LR+  K  +  S   +   D+SF EI  AT+ FDPS K+GEG YGS
Sbjct:   415 IRIDHENAVKEVNALRRLVKGETGESSGSEML-DYSFMEINEATNEFDPSWKLGEGKYGS 473

Query:   544 IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYL 603
             +YKG L+H+QVA+KML  +      EF++ ++ILS++RHPNLVTL+GACPE  +L+Y+Y+
Sbjct:   474 VYKGNLQHLQVAVKMLPSYGSLNHFEFERRVEILSRVRHPNLVTLMGACPESRSLIYQYI 533

Query:   604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
             PNGSLED  S ++N P LSW++RIRIA+E+CS L+FLHS  P  I+HG+LKP+ ILLD+N
Sbjct:   534 PNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP-CIIHGNLKPSKILLDSN 592

Query:   664 FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGI 723
              V+K++D+GIS+ +  + +         ++DP     ++DP +  S E+T +SD+Y+FGI
Sbjct:   593 LVTKINDYGISQLIPIDGLD--------KSDP-----HVDPHYFVSREMTLESDIYAFGI 639

Query:   724 ILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 783
             ILL+LLT RP  GI ++V+ AL+   +  +LD  AGDWP  + ++LAN+A+RCC+ +  +
Sbjct:   640 ILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMN 699

Query:   784 RPELGKDVWRVLEPMRAS---CGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADG 840
             RP+L   V R ++ M+A       ++SY   +  R  PP ++ CPIFQEVM+DP +AADG
Sbjct:   700 RPDLAV-VLRFIDRMKAPEVPSSETSSYANQNVPR-RPPSHYLCPIFQEVMKDPLIAADG 757

Query:   841 FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 887
             FTYEAEA++ WL +GH+TSPMTNL +   NL+PN AL  AIQ+W  Q
Sbjct:   758 FTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDWQNQ 804

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2117343 AT4G25160 [Arabidopsis thaliana (taxid:3702)]

 Score = 922 (329.6 bits), Expect = 7.2e-107, Sum P(3) = 7.2e-107
 Identities = 212/574 (36%), Positives = 321/574 (55%)

Query:   320 DVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEE 379
             DV+ I    T+  S   P + D +    + +  S  +  Y       + +          
Sbjct:   267 DVSSINRSSTDTTSRWTPRRRDYEERKEA-MSSSSSNREYGNFGTRFSWSGMGVDTTHSR 325

Query:   380 ALRRGKAEKDAI--ESIRRAKASESLYAEELKRR-KEFEEALANGKLELERMKKQHDEVM 436
             A ++     DA+  +S    + + +   E+L+   +  +E  A  + E     ++  E+ 
Sbjct:   326 ASQQASNMSDALSEQSYTDNQVNLNFEVEKLRAELRHVQEMYAVAQTETFDASRKLGELN 385

Query:   437 E---ELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVK 493
             +   E  I L++  L E +  E  +  K+  +K     E ++  ++ + E+   R+   K
Sbjct:   386 QRRLEEAIKLEELKLKEYEARELAEKEKQNFEKARRDAESMR--ERAEREIAQRREAERK 443

Query:   494 EAEELRKSRK-EASSSSHMPQF-FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH 551
              A + ++  K E +  S  PQ  +  F++ EI  AT +F   LKIG G YG++YK  L H
Sbjct:   444 SARDTKEKEKLEGTLGS--PQLQYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHH 501

Query:   552 MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDR 611
                 +K+L     Q   +FQQE++ILSKIRHP+LV L+GACPE   LVYEY+ NGSLEDR
Sbjct:   502 TTAVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDR 561

Query:   612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
             L   +NSPPL W  R RIA E+ + L+FLH  KP  I+H DLKPANILLD NFVSK+ D 
Sbjct:   562 LFQVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDV 621

Query:   672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
             G+S  +  + +S+   T+  +T P GT  Y+DPE+  +G ++ KSD+YSFG+ILL+LLT 
Sbjct:   622 GLSTMVQVDPLSTK-FTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTA 680

Query:   732 RPALGITKEVQYALDTG-KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 790
             +PA+ +T  V+ A+D+  +   +LD  AG+WP  +  +LA LA+ C E+  K RP+L   
Sbjct:   681 KPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQ 740

Query:   791 VWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKG 850
             +   LE ++     + +   G     +PP +F CP+ ++VM +P VAADG+TY+  A++ 
Sbjct:   741 ILPALENLKKVAEKARNSFSGVST--QPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEE 798

Query:   851 WLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
             WL   H TSPMT+ PL  KNL+PN  L +AI EW
Sbjct:   799 WLKE-HNTSPMTDSPLHSKNLLPNYTLYTAIMEW 831

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0002238 "response to molecule of fungal origin" evidence=RCA

TAIR|locus:2176177 AT5G51270 [Arabidopsis thaliana (taxid:3702)]

 Score = 917 (327.9 bits), Expect = 1.5e-102, Sum P(3) = 1.5e-102
 Identities = 204/530 (38%), Positives = 308/530 (58%)

Query:   363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN-G 421
             A   +  E SR  ++    R     KDA+ S+       ++         + ++ L    
Sbjct:   291 ASKRSSPETSRSVSWNPQFRDFDERKDAMSSMSSNFEYGNVVTPLGHYFTDNQDTLNEIS 350

Query:   422 KLELERMKKQHDEVMEELQI-ALDQKSLLESQIAESDQTAKELEQKIISA--VELLQNYK 478
             KL  E ++  H E+    Q+  LD    L +++   + T  E E K I+    E  +  +
Sbjct:   351 KLRAE-LRHAH-EMYAVAQVETLDASRKL-NELKFEELTLLEHETKGIAKKETEKFEQKR 407

Query:   479 KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPSLKIG 537
             +E+ E    R+  +K   E ++  K   SS   P+  + +F++ EI  AT +F   LKIG
Sbjct:   408 REEREAAQRREAEMKATHEAKEKEKLEESSLVAPKLQYQEFTWEEIINATSSFSEDLKIG 467

Query:   538 EGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT 597
              G YG +YK  L H   A+K+LH        +F QE++ILSKIRHP+LV L+GACP+   
Sbjct:   468 MGAYGDVYKCNLHHTIAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLLGACPDHGA 527

Query:   598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
             LVYEY+ NGSLEDRL   ++S P+ W  R+RIA E+ S L+FLH  KP  I+H DLKPAN
Sbjct:   528 LVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLKPAN 587

Query:   658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSD 717
             ILL+ NFVSK+ D G+S  +   +  S   T+  +T P GT  Y+DPE+  +G ++PKSD
Sbjct:   588 ILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSD 647

Query:   718 VYSFGIILLRLLTGRPALGITKEVQYALDTG---KLKNLLDPLAGDWPFVQAEQLANLAM 774
             VY+FG+I+L+LLTG+ A+ +T  V+ A++     +L  +LD  AG+WP  +  QLA LA+
Sbjct:   648 VYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALAL 707

Query:   775 RCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDP 834
             +C E+  K RP+L   +  VLE ++     + +    S    +PP +F CP+ ++VM++P
Sbjct:   708 QCTELRSKDRPDLEDQILPVLESLKKVADKARNSL--SAAPSQPPSHFFCPLLKDVMKEP 765

Query:   835 HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
              +AADG+TY+  A++ W+++ H TSP+TN PL + NL+PN  L +AI EW
Sbjct:   766 CIAADGYTYDRRAIEEWMEN-HRTSPVTNSPLQNVNLLPNHTLYAAIVEW 814

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2151641 AT5G61560 [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 3.1e-102, Sum P(3) = 3.1e-102
 Identities = 202/487 (41%), Positives = 296/487 (60%)

Query:   417 ALANGKLELERMKKQHDEVMEELQIALDQKSLL--ESQIAESDQTAKELEQKIISAVELL 474
             A+A  ++ ++  KK  D      + A   K+L   E +  E  +  +E ++   +  EL+
Sbjct:   314 AVAQSEV-IDASKKMQDLNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELV 372

Query:   475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH----MPQFFSDFSFSEIEGATHNF 530
             +   + + E   ER +A   AEE+RK ++    +        Q +  F + EI  AT +F
Sbjct:   373 RECIERETE---ERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSF 429

Query:   531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
                LKIG GGYGS+Y+  L H  VA+K+LH        +F QE++ILSKIRHP+L+ L+G
Sbjct:   430 SDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLG 489

Query:   591 ACPEVWTLVYEYLPNGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCK 644
             ACPE  +LVYEY+ NGSLE+RL  +         PPL W  R RIA E+ S L FLH+ +
Sbjct:   490 ACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNE 549

Query:   645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
             P  IVH DLKPANILLD N VSK+ D G+S+ ++ +   S+ +T+   T P GTF Y+DP
Sbjct:   550 PRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDP--SHASTVFNETGPVGTFFYIDP 607

Query:   705 EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWP 762
             E+  +G +TP+SD+Y+FGIILL+L+T R A+G+   ++ AL   TGK   +LD  AGDWP
Sbjct:   608 EYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWP 667

Query:   763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR--ASCGGSTSYRLGSEERCEPPP 820
               +A+++  + +RC EM ++ RP+LGK++  VLE ++  AS   +       +     P 
Sbjct:   668 VKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPT 727

Query:   821 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSA 880
             +F CPI ++VM++P VA+DG+TYE  A+K WL   H+ SPMT+LP    +L+PN +L SA
Sbjct:   728 HFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSA 786

Query:   881 IQEWLQQ 887
             I+EW  Q
Sbjct:   787 IKEWRSQ 793

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0002238 "response to molecule of fungal origin" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:504954932 AT5G57035 [Arabidopsis thaliana (taxid:3702)]

 Score = 851 (304.6 bits), Expect = 4.4e-99, Sum P(3) = 4.4e-99
 Identities = 193/527 (36%), Positives = 296/527 (56%)

Query:   366 MAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLEL 425
             + + E+ R       +   K + D    ++  K+      E+L  RKE +  L+  K   
Sbjct:   259 LVDDEHCRSILRHSTVSTSKIQMDPRPHLKTPKSGVRAEVEQL--RKEVQTTLSMYKQAC 316

Query:   426 ERMKKQHDEVMEELQIALDQKSLLESQIAESD---QTAKELEQKIISAVELLQNYK---- 478
             E +  +  +V       + +   + + + + +   + A E ++K + AV+ ++  K    
Sbjct:   317 EELVHKQTQVQSLSSECIKETERVITALEKEEMRRKAAAEEKEKHLKAVKEVEEAKSMLA 376

Query:   479 KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGE 538
             KE  E Q+    A+K++ E +K  ++          +  ++  EI  AT NF     IGE
Sbjct:   377 KEFCERQLAELDALKQSIEKQKVIEQLFLRDGR---YRKYTKEEIAAATDNFSSRKIIGE 433

Query:   539 GGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL 598
             GGYG +YK  L H  VA+K+L P S++   EF +EI +LS++RHP++V L+GACPE   L
Sbjct:   434 GGYGKVYKCSLDHTPVALKVLKPDSVEKKEEFLKEISVLSQLRHPHVVLLLGACPENGCL 493

Query:   599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
             VYEY+ NGSL+  +S K   P LSW  R RI  E    L FLH+ KP  IVH DLKP NI
Sbjct:   494 VYEYMENGSLDCHISPKKGKPSLSWFIRFRIIYETACGLAFLHNSKPEPIVHRDLKPGNI 553

Query:   659 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDV 718
             LLD NFVSK+ D G+++ +S    + ++ T+   +   GT  YMDPE+  +G + PKSD+
Sbjct:   554 LLDRNFVSKIGDVGLAKLMSDE--APDSVTVYRNSIIAGTLYYMDPEYQRTGTIRPKSDL 611

Query:   719 YSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 778
             Y+FGII+L+LLT R   G+   V+ A+  G  +++LD    DWP  +A++LA +A+RC +
Sbjct:   612 YAFGIIILQLLTARHPNGLLFCVEDAVKRGCFEDMLDGSVKDWPIAEAKELARIAIRCSQ 671

Query:   779 MSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEE-RCEPPPYFTCPIFQEVMQDPHVA 837
             +  + RP+L   V   L+ +  S       RL +E+     P ++ CPI +E+M+DP +A
Sbjct:   672 LKCRDRPDLSTQVLPALKRILESANS----RLKTEQANARAPTHYYCPILKEIMEDPQIA 727

Query:   838 ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
             ADGFTYE +A+K W+    + SP+T   L H +L PN  LRSAI+EW
Sbjct:   728 ADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLRSAIREW 774

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q0DR28 PUB57 "U-box domain-containing protein 57" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 205/500 (41%), Positives = 294/500 (58%)

Query:   398 KASESLYAEELKRRKEFE--EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAE 455
             K   S++ E +     F   E +    +  +++ K  D + +   +A   + + + +  E
Sbjct:    28 KFEPSVWCEAIDIHNTFSAGEIITGDIICFQKILKPPD-IPKYPSVASFLQHVCDRKTYE 86

Query:   456 SDQTAKELEQKIISAVELLQNY--KKEQ-----DELQMERDKAVKEAEELRKSRKEASSS 508
               +    LE++I++       Y  +KE+     D+L+ ERD AV++  ELR        S
Sbjct:    87 EVRKVHILEEEIVTLKHQADTYLVQKEKAVTAYDQLKHERDNAVQQVNELR------DQS 140

Query:   509 SHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS 568
             +H+     DFS  ++E AT +F  + ++G+  YG  YKG++ +M+V IK+     L    
Sbjct:   141 THI---ILDFSRKDMEQATEHFKNAREVGDTEYGHTYKGMIHNMKVLIKLSSSQKL---- 193

Query:   569 EFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
              FQQE+ IL + RHPN++T +G C EV  LVYE+LPNG+LEDR+ C +NS PLSW  R +
Sbjct:   194 -FQQEVSILRQWRHPNIITFIGVCSEVSALVYEWLPNGNLEDRIICTNNSAPLSWYNRTQ 252

Query:   629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
             I  E+C  L+FLHS K  ++VHGDL+P NIL+DAN+ SK+ +FG+S    Q      N T
Sbjct:   253 IIGEICCALLFLHSNKSTALVHGDLRPCNILIDANYRSKICNFGMSNLFLQLGTFPPNLT 312

Query:   689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
                         YMDPEF  +GELT  SDVYS G+I+LRLLTG P L ++++V  AL + 
Sbjct:   313 --------ARLPYMDPEFNTTGELTTLSDVYSLGVIILRLLTGMPPLTLSEKVAEALGSD 364

Query:   749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGST-S 807
              L  L+D  AGDWP+++A+QLA + + C  M+RK RP+L  +VW V+EP+      +T  
Sbjct:   365 SLHLLIDKSAGDWPYIEAKQLALIGLSCTGMTRKKRPDLLNEVWIVIEPLTRKPPAATWP 424

Query:   808 YRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLA 867
             Y   +      P  F CPI  E+M+DP VA+DGFTYEAEA++ W D G   SPMTNL L 
Sbjct:   425 YLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALP 484

Query:   868 HKNLVPNLALRSAIQEWLQQ 887
             + NLVPN  LRS I  +LQQ
Sbjct:   485 NLNLVPNRVLRSFIHGYLQQ 504

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0016567 "protein ubiquitination" evidence=IDA

TAIR|locus:2047605 AT2G19410 [Arabidopsis thaliana (taxid:3702)]

 Score = 823 (294.8 bits), Expect = 2.3e-88, Sum P(3) = 2.3e-88
 Identities = 187/520 (35%), Positives = 299/520 (57%)

Query:   366 MAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLEL 425
             ++E  +S R   E + +  K E +  E + R K    L +   K ++  EE L + + ++
Sbjct:   289 VSEHRDSDRSPPETSRKSKKVEIE--EEVERLK--NELQSTVFKYKQACEE-LFSTQNKV 343

Query:   426 ERMKKQHDEVMEELQIALDQKSLLESQIA-ESDQTAKELEQKIISAVELLQNYKKEQDEL 484
             + +  ++    + +  A++++ L  +  A E ++  K +++ + +A  LL    +E  + 
Sbjct:   344 KMLSTEYLNESKRVNNAVEKEELQRNTAALEKERYMKAVKE-VETAKALLA---REFCQR 399

Query:   485 QMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSI 544
             Q+    A++   E +K   +   + H    +  ++  EI  AT  F P   IGEGGYG +
Sbjct:   400 QIAEVNALRTYLEKKKVIDQLLGTDHR---YRKYTIEEIVTATEGFSPEKVIGEGGYGKV 456

Query:   545 YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLP 604
             Y+  L     A+K++   + +   EF +E+++LS++RHP++V L+GACPE   LVYEYL 
Sbjct:   457 YQCSLDSTPAAVKVVRLDTPEKKQEFLKEVEVLSQLRHPHVVLLLGACPENGCLVYEYLE 516

Query:   605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664
             NGSLE+ +  + N PPL W  R R+  E+   L FLHS KP  IVH DLKP NILL+ N+
Sbjct:   517 NGSLEEYIFHRKNKPPLPWFIRFRVIFEVACGLAFLHSSKPEPIVHRDLKPGNILLNRNY 576

Query:   665 VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGII 724
             VSK++D G+++ ++  +++ +N T+   +   GT  Y+DPE+  +G + PKSD+Y+FGII
Sbjct:   577 VSKIADVGLAKLVT--DVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGII 634

Query:   725 LLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR 784
             +L+LLT R   GI   V+ A+  G L  +LD    DWP  + E+LA + ++C E   + R
Sbjct:   635 ILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDR 694

Query:   785 PELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYE 844
             P+L  +V  VL+ +      S   + GS  R  P  YF CPI +E+M++P +AADGFTYE
Sbjct:   695 PDLKSEVIPVLKRL-VETANSKVKKEGSNLRA-PSHYF-CPILREIMEEPEIAADGFTYE 751

Query:   845 AEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 884
              +A+  WL+  H  SP+T   L H  L PN  LRSAI++W
Sbjct:   752 RKAILAWLEK-HNISPVTRQKLDHFKLTPNHTLRSAIRDW 790

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2128131 AT4G31230 [Arabidopsis thaliana (taxid:3702)]

 Score = 803 (287.7 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
 Identities = 192/475 (40%), Positives = 272/475 (57%)

Query:   341 DLQSSPPSVLDGS-VDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399
             D   +PP + + S VD   ++ +       + S   AF       +    A +     +A
Sbjct:   280 DPNRTPPRLSNFSDVDYCSFESMTFGRRSMDLSSPTAFSTGSFENERFSSASQGGDDVEA 339

Query:   400 SESLYAEELKRRKEF-----EEAL-ANGKL-ELERMKKQHDEVMEELQIALDQKSLLESQ 452
                    ELK+  E      +EAL A  K  EL+R K   +   EE ++A ++ +L    
Sbjct:   340 EMRRLKLELKQTMEMYSTACKEALTAKHKATELQRWKLAEERKFEEAKLA-EEAALA--- 395

Query:   453 IAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD-KAVKEAEELRKSRKEASSSSHM 511
             IAE ++ AK   +  + A E  Q     +   +++ + KA+KE+E    +R +A ++   
Sbjct:   396 IAEKEK-AKS--KAAMEAAEAAQRIADIESRKRVDAETKALKESE----ARTKAVNALAK 448

Query:   512 PQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQ 571
                +  +S  EIE AT  FD   KIGEG YG +YK  L H  VA+K L P + QG S+FQ
Sbjct:   449 DVRYRKYSIEEIEDATEFFDDKYKIGEGSYGPVYKCYLDHTPVAVKALRPDAAQGRSQFQ 508

Query:   572 QEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
             +E+++L  IRHPN+V L+GACPE   LVYE++ NGSLEDRL  + +SP LSWQTR RIA 
Sbjct:   509 KEVEVLCSIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRQGDSPALSWQTRFRIAA 568

Query:   632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
             E+ +VL+FLH  KP  +VH DLKPANILLD NFVSKL+D G++R +  +   +N  T   
Sbjct:   569 EIGTVLLFLHQTKPEPLVHRDLKPANILLDRNFVSKLADVGLARLVPPSV--ANTVTQYH 626

Query:   692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 751
              T   GTF Y+DPE+  +G L  KSD+YS GI+ L+L+TG+P +G+T  V+ AL+ G LK
Sbjct:   627 MTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITGKPPMGLTHYVERALEKGNLK 686

Query:   752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGST 806
             +LLDP   DWP     + A LA++C E+ RK RP+L K +   L  +R     ST
Sbjct:   687 DLLDPAVSDWPVEDTTEFAKLALKCAEIRRKDRPDLSKVILPELNRLRVLAEEST 741

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002238 "response to molecule of fungal origin" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

TAIR|locus:2143094 AT5G12000 [Arabidopsis thaliana (taxid:3702)]

 Score = 788 (282.4 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
 Identities = 172/444 (38%), Positives = 265/444 (59%)

Query:   353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
             S  D   D  +  M  + +   E F+     G +++ A +S R  +A       ELK+  
Sbjct:   247 SFSDESSDVGSMMMMGSIDLSAENFDMVGGSGSSDESASQSTRDIEAEMKRLKIELKQTM 306

Query:   413 EFEEALANGKLELERMKKQHDE-VMEELQIALDQKSLLESQIAESDQTAKELEQ-KIISA 470
             +   +     L  ++   + ++  MEE +   + ++  E+ +A +     E+E+ K  +A
Sbjct:   307 DMYSSACKEALNAKKKANELNQWKMEEARRFEEARNAEEAALAVA-----EMEKAKCRAA 361

Query:   471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF---FSDFSFSEIEGAT 527
             +E  +  ++   EL+ +R K   E +  R+S+++  + S + Q    +  +S  EIE AT
Sbjct:   362 LEAAEKAQR-MAELEGQRRKQA-EMKARRESQEKDRALSALVQNDVRYRKYSIDEIEVAT 419

Query:   528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
               F  + KIGEGGYG +Y G L H  VAIK+L P + QG  +FQQE+++LS IRHP++V 
Sbjct:   420 ERFANNRKIGEGGYGPVYHGTLDHTPVAIKVLRPDAAQGKKQFQQEVEVLSSIRHPHMVL 479

Query:   588 LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
             L+GACPE   LVYE++ NGSLEDRL  + NSPPLSW+ R +IA E+ + L FLH  KP  
Sbjct:   480 LLGACPEYGCLVYEFMDNGSLEDRLFRRGNSPPLSWRKRFQIAAEIATALSFLHQAKPEP 539

Query:   648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
             +VH DLKPANILLD N+VSK+SD G++R +  +   +N  T    T   GTF Y+DPE+ 
Sbjct:   540 LVHRDLKPANILLDKNYVSKISDVGLARLVPASV--ANTVTQYHMTSAAGTFCYIDPEYQ 597

Query:   708 ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 767
              +G+LT KSD++S GI+LL+++T +  +G+   V  A+D G  K++LDP+  DWP  +A 
Sbjct:   598 QTGKLTTKSDIFSLGIMLLQIITAKSPMGLAHHVSRAIDKGTFKDMLDPVVPDWPVEEAL 657

Query:   768 QLANLAMRCCEMSRKSRPELGKDV 791
               A L +RC E+ ++ RP+LGK++
Sbjct:   658 NFAKLCLRCAELRKRDRPDLGKEI 681

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002238 "response to molecule of fungal origin" evidence=RCA

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GUH1	PUB33_ARATH	2, ., 7, ., 1, 1, ., -	0.5680	0.9290	0.9892	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	6.3.2	0.691
3rd Layer	2.7.11	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	888
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-50
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-47
cd01989	146	cd01989, STK_N, The N-terminal domain of Eukaryoti	4e-46
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	6e-46
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-45
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-43
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-41
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-40
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-38
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-38
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-34
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-30
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-28
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-28
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-27
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-26
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-26
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-25
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-25
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-24
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-24
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-24
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-24
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-24
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-24
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-23
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-23
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-23
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	7e-23
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-23
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-22
smart00504	63	smart00504, Ubox, Modified RING finger domain	2e-22
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-22
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-22
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-22
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-22
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	7e-22
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-22
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-21
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-21
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-21
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-21
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	5e-21
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	5e-21
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-21
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	8e-21
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-20
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-20
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-20
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-20
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-20
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-20
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	7e-20
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-20
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-19
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-19
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-19
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-19
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	5e-19
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-19
pfam04564	73	pfam04564, U-box, U-box domain	7e-19
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-19
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-18
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-18
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-18
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-18
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-18
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-18
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	6e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-18
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	8e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-17
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-17
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-17
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-17
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-17
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-17
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-17
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-17
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	6e-17
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	7e-17
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-17
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	7e-17
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	8e-17
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-16
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-16
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-16
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-16
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-16
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-16
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-16
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-16
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-16
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-16
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-16
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-16
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-16
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-16
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-16
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-16
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-16
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-16
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	7e-16
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-16
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-16
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	9e-16
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-15
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-15
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-15
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-15
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-15
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-15
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	4e-15
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-15
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-15
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-15
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-15
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-15
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-15
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-14
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-14
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-14
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-14
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-14
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-14
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-14
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-14
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-14
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-14
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-14
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-14
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-14
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-14
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	9e-14
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	9e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-13
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-13
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-13
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-13
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-13
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-13
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-13
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-12
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-12
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-12
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-12
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	5e-12
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-12
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	6e-12
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-12
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-12
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	7e-12
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	9e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-11
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-11
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-11
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-11
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-11
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-11
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-11
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-11
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	5e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	7e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-11
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	9e-11
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-10
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-10
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-10
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-10
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	4e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-10
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-10
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-09
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-09
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-09
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-09
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-09
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-09
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	5e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-09
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	5e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	7e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-09
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	9e-09
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	1e-08
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-08
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-08
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-08
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	4e-08
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-08
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	7e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-07
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-07
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-07
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-07
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-07
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-07
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-07
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-07
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-07
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	6e-07
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	6e-07
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	8e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	9e-07
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-06
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-06
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-06
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-06
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-06
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	2e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-06
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-06
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-06
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	4e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-06
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	6e-06
COG1579	239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	7e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-06
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	1e-05
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	1e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-05
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	2e-05
COG1340	294	COG1340, COG1340, Uncharacterized archaeal coiled-	2e-05
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-05
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-05
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-05
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	3e-05
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-05
cd00293	130	cd00293, USP_Like, Usp: Universal stress protein f	3e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-05
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-05
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	4e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	4e-05
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	5e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-05
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	5e-05
COG1842	225	COG1842, PspA, Phage shock protein A (IM30), suppr	6e-05
pfam04012	220	pfam04012, PspA_IM30, PspA/IM30 family	6e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	6e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	7e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	8e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	8e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	8e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-05
pfam13868	349	pfam13868, Trichoplein, Tumour suppressor, Mitosta	9e-05
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	9e-05
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-04
PRK12704	520	PRK12704, PRK12704, phosphodiesterase; Provisional	1e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	1e-04
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-04
pfam12128	1198	pfam12128, DUF3584, Protein of unknown function (D	1e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-04
pfam09731	493	pfam09731, Mitofilin, Mitochondrial inner membrane	2e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	2e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-04
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-04
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	3e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-04
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	4e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-04
COG4487	438	COG4487, COG4487, Uncharacterized protein conserve	4e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-04
pfam13863	126	pfam13863, DUF4200, Domain of unknown function (DU	4e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	5e-04
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	6e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	6e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	6e-04
pfam13949	292	pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain bi	6e-04
TIGR03319	514	TIGR03319, RNase_Y, ribonuclease Y	6e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	7e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	7e-04
pfam01576	859	pfam01576, Myosin_tail_1, Myosin tail	8e-04
pfam13514	1118	pfam13514, AAA_27, AAA domain	8e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-04
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.001
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.001
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.001
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.001
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.001
pfam00769	244	pfam00769, ERM, Ezrin/radixin/moesin family	0.001
pfam00430	132	pfam00430, ATP-synt_B, ATP synthase B/B' CF(0)	0.001
COG4477	570	COG4477, EzrA, Negative regulator of septation rin	0.001
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.002
pfam01576	859	pfam01576, Myosin_tail_1, Myosin tail	0.002
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.002
PRK02224	880	PRK02224, PRK02224, chromosome segregation protein	0.002
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	0.002
PRK12705	508	PRK12705, PRK12705, hypothetical protein; Provisio	0.002
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.003
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.003
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.003
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.003
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.003
PRK00409	782	PRK00409, PRK00409, recombination and DNA strand e	0.003
COG4372	499	COG4372, COG4372, Uncharacterized protein conserve	0.003
pfam12037	276	pfam12037, DUF3523, Domain of unknown function (DU	0.003
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.003
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.004
COG4026	290	COG4026, COG4026, Uncharacterized protein containi	0.004
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.004
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.004
COG3096	1480	COG3096, MukB, Uncharacterized protein involved in	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  176 bits (448), Expect = 2e-50
 Identities = 79/200 (39%), Positives = 110/200 (55%), Gaps = 20/200 (10%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC 592
           +GEGG+G++Y    +    +VAIK++          E  +EI+IL K+ HPN+V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  LV EY   GSL+D L  K+N   LS    +RI  ++   L +LHS   + I+H
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLL--KENEGKLSEDEILRILLQILEGLEYLHS---NGIIH 115

Query: 651 GDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
            DLKP NILLD+ N   KL+DFG+S+ L+ +   S   T+       GT AYM PE  L 
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSD--KSLLKTIV------GTPAYMAPEVLLG 167

Query: 709 SGELTPKSDVYSFGIILLRL 728
            G  + KSD++S G+IL  L
Sbjct: 168 KGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  169 bits (430), Expect = 2e-47
 Identities = 83/268 (30%), Positives = 117/268 (43%), Gaps = 30/268 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           K+GEG +G +Y    +     VAIK++      +      +EI IL K++HPN+V L   
Sbjct: 6   KLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDV 65

Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                +++ LV EY   G L D L        LS         ++ S L +LHS     I
Sbjct: 66  FEDEDKLY-LVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSALEYLHS---KGI 118

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH DLKP NILLD +   KL+DFG++R L   E     TT        GT  YM PE L 
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLARQLDPGEKL---TTFV------GTPEYMAPEVLL 169

Query: 709 SGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 767
                   D++S G+IL  LLTG+ P  G  + ++     GK K    P   D       
Sbjct: 170 GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDIS----P 225

Query: 768 QLANLAMRCCEMSRKSRP---ELGKDVW 792
           +  +L  +      + R    E  +  +
Sbjct: 226 EAKDLIRKLLVKDPEKRLTAEEALQHPF 253

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|238947 cd01989, STK_N, The N-terminal domain of Eukaryotic Serine Threonine kinases

 Score =  161 bits (409), Expect = 4e-46
 Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 12/156 (7%)

Query: 46  KIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKV 103
            + VAV K  K+SK+ L WAL N  + G+ I ++HVH P   IP    K        E  
Sbjct: 1   SVAVAVDK-DKKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKL-------EVA 52

Query: 104 QAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAA 163
            AY++ E ++    L      C + GV+ E +  E +   K I+E ++ +GI KLVMGA+
Sbjct: 53  SAYKQEEDKEAKELLLPYRCFCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGAS 112

Query: 164 ADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199
           +D H+  K    KS  A SV ++AP  C ++ +  G
Sbjct: 113 SDNHFSMK--FKKSDVASSVLKEAPDFCTVYVVSKG 146

The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding. Length = 146

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  165 bits (419), Expect = 6e-46
 Identities = 98/273 (35%), Positives = 137/273 (50%), Gaps = 34/273 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLV 589
           K+G G +G++YK   +     VA+K+L   S +   + Q    EI IL ++ HPN+V L+
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRLSHPNIVRLI 64

Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            A      ++ LV EY   G L D LS      PLS     +IA ++   L +LHS   +
Sbjct: 65  DAFEDKDHLY-LVMEYCEGGDLFDYLS---RGGPLSEDEAKKIALQILRGLEYLHS---N 117

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            I+H DLKP NILLD N V K++DFG+++ L ++  SS+ TT        GT  YM PE 
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKS--SSSLTTFV------GTPWYMAPEV 169

Query: 707 LASGEL-TPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           L  G    PK DV+S G+IL  LLTG+P   G     Q  L     + L  PL  D P  
Sbjct: 170 LLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLI---RRILGPPLEFDEPKW 226

Query: 765 --QAEQLANLAMRCCEMSRKSRP---ELGKDVW 792
              +E+  +L  +C       RP   E+ +  W
Sbjct: 227 SSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPW 259

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  164 bits (418), Expect = 1e-45
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 32/263 (12%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           K+GEG +G +YKG L+       ++VA+K L    S Q   EF +E  I+ K+ HPN+V 
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+G C   E   +V EY+  G L   L  + N P LS    +  A ++   + +L S   
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGMEYLESKN- 122

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H DL   N L+  N V K+SDFG+SR L  ++          +   K    +M PE
Sbjct: 123 --FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY-------YRKRGGKLPIRWMAPE 173

Query: 706 FLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWP 762
            L  G+ T KSDV+SFG++L  + T   +P  G++ +EV   L  G     L       P
Sbjct: 174 SLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNG---YRLPQ-----P 225

Query: 763 FVQAEQLANLAMRCCEMSRKSRP 785
                +L +L ++C     + RP
Sbjct: 226 PNCPPELYDLMLQCWAEDPEDRP 248

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  156 bits (398), Expect = 5e-43
 Identities = 87/264 (32%), Positives = 125/264 (47%), Gaps = 33/264 (12%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           K+GEG +G +YKG L+       ++VA+K L    S Q   EF +E  I+ K+ HPN+V 
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPP-LSWQTRIRIATELCSVLIFLHSCK 644
           L+G C   E   +V EY+P G L D L  + N P  LS    +  A ++   + +L S  
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYL--RKNRPKELSLSDLLSFALQIARGMEYLESKN 123

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N L+  N V K+SDFG+SR L  ++              K    +M P
Sbjct: 124 ---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK-------VKGGKLPIRWMAP 173

Query: 705 EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDW 761
           E L  G+ T KSDV+SFG++L  + T    P  G++  EV   L  G     L       
Sbjct: 174 ESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKG---YRLPK----- 225

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P     +L  L ++C     + RP
Sbjct: 226 PPNCPPELYKLMLQCWAEDPEDRP 249

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  151 bits (384), Expect = 4e-41
 Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 35/265 (13%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
           K+GEG +G +YKG L+        +VA+K L    S +   EF +E  I+ K+ HPN+V 
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+G C   E   +V EY+P G L D L  + +   L+ +  +++A ++   + +L S   
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYLES--- 120

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYMD 703
            + VH DL   N L+  N V K+SDFG+SR + +++          R    G     +M 
Sbjct: 121 KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYY--------RKRGGGKLPIKWMA 172

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGD 760
           PE L  G+ T KSDV+SFG++L  + T   +P  G++ +EV   L+ G     L      
Sbjct: 173 PESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDG---YRLPRPENC 229

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP 785
                  +L  L ++C     + RP
Sbjct: 230 PD-----ELYELMLQCWAYDPEDRP 249

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  148 bits (377), Expect = 4e-40
 Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 23/205 (11%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
           K+GEG +G +YKG L+       +VA+K L    S +   +F +E  ++ K+ HPN+V L
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 589 VGACPEV--WTLVYEYLPNGSLEDRL------SCKDNSPPLSWQTRIRIATELCSVLIFL 640
           +G C E     LV EY+  G L D L              LS +  +  A ++   + +L
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
            S K    VH DL   N L+  + V K+SDFG+SR +  ++             P     
Sbjct: 122 ASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD---YYRKKTGGKLP---IR 172

Query: 701 YMDPEFLASGELTPKSDVYSFGIIL 725
           +M PE L  G  T KSDV+SFG++L
Sbjct: 173 WMAPESLKDGIFTSKSDVWSFGVLL 197

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  143 bits (362), Expect = 2e-38
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 20/209 (9%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           F+   KIG+GG+G +YK   +     VAIK++   S +   +   EI IL K +HPN+V 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 588 LVGA--CP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
             G+     E+W +V E+   GSL+D L  K  +  L+      +  EL   L +LHS  
Sbjct: 62  YYGSYLKKDELW-IVMEFCSGGSLKDLL--KSTNQTLTESQIAYVCKELLKGLEYLHS-- 116

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            + I+H D+K ANILL ++   KL DFG+S  LS  +  + NT +       GT  +M P
Sbjct: 117 -NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK--ARNTMV-------GTPYWMAP 166

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E +       K+D++S GI  + L  G+P
Sbjct: 167 EVINGKPYDYKADIWSLGITAIELAEGKP 195

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  142 bits (360), Expect = 5e-38
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 20/207 (9%)

Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
            +G G +GS+Y  L +     +A+K   L   S +     ++EI ILS ++HPN+V   G
Sbjct: 7   LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66

Query: 591 AC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +          +  EY+  GSL   L        L      +   ++   L +LHS   +
Sbjct: 67  SERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKLPEPVIRKYTRQILEGLAYLHS---N 120

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            IVH D+K ANIL+D++ V KL+DFG ++ L   E      ++      +GT  +M PE 
Sbjct: 121 GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSV------RGTPYWMAPEV 174

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           +   E    +D++S G  ++ + TG+P
Sbjct: 175 IRGEEYGRAADIWSLGCTVIEMATGKP 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  133 bits (335), Expect = 9e-34
 Identities = 88/269 (32%), Positives = 123/269 (45%), Gaps = 22/269 (8%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP-NLVTL-- 588
           K+GEG +G +Y        VA+K+L         E   F +EI IL+ + HP N+V L  
Sbjct: 7   KLGEGSFGEVYLAR-DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYD 65

Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                    LV EY+  GSLED L       PLS    + I  ++ S L +LHS     I
Sbjct: 66  FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGI 122

Query: 649 VHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +H D+KP NILLD +  V KL DFG+++ L     +S+   L   +   GT  YM PE L
Sbjct: 123 IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALP--STSVGTPGYMAPEVL 180

Query: 708 ASGEL---TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------LKNLLDPLA 758
               L   +  SD++S GI L  LLTG P     K       T K        +L  PL+
Sbjct: 181 LGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLS 240

Query: 759 GDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
              P + ++  ++L  +      K+R   
Sbjct: 241 PSNPELISKAASDLLKKLLAKDPKNRLSS 269

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  119 bits (301), Expect = 5e-30
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +IG+G +G +Y  L+R         +K   L   S +   +   E+ IL K+ HPN++  
Sbjct: 7   QIGKGSFGKVY--LVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64

Query: 589 VGACPEVWT------LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLH 641
                E +       +V EY   G L  ++   K    P   +  +    +LC  L +LH
Sbjct: 65  Y----ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S K   I+H D+KP NI L +N + KL DFGIS+ LS     +   T+       GT  Y
Sbjct: 121 SRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAK--TVV------GTPYY 169

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPA 734
           + PE   +     KSD++S G +L  L T +  
Sbjct: 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  113 bits (285), Expect = 4e-28
 Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 20/205 (9%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVG 590
            IG G +G +YKGL       VAIK +    ++  +     QEID+L  ++HPN+V  +G
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66

Query: 591 ACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +     +L  + EY  NGSL   +       P           ++   L +LH      +
Sbjct: 67  SIETSDSLYIILEYAENGSLRQIIK---KFGPFPESLVAVYVYQVLQGLAYLHE---QGV 120

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K ANIL   + V KL+DFG++  L+                  GT  +M PE + 
Sbjct: 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--------DASVVGTPYWMAPEVIE 172

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
               +  SD++S G  ++ LLTG P
Sbjct: 173 MSGASTASDIWSLGCTVIELLTGNP 197

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  113 bits (286), Expect = 5e-28
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 22/205 (10%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
            +G+G  G +YK   +      A+K +H     +   +  +E+  L     P +V   GA
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67

Query: 592 C--PEVWTLVYEYLPNGSLEDRL--SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                  ++V EY+  GSL D L    K   P L+      IA ++   L +LH      
Sbjct: 68  FYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLDYLH--TKRH 120

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H D+KP+N+L+++    K++DFGIS+ L        NT   C T   GT  YM PE +
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLE-------NTLDQCNTF-VGTVTYMSPERI 172

Query: 708 ASGELTPKSDVYSFGIILLRLLTGR 732
                +  +D++S G+ LL    G+
Sbjct: 173 QGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  112 bits (283), Expect = 1e-27
 Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 18/220 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           K+G G +G ++ G      +VA+K L P ++  P  F QE  I+ K+RH  LV L   C 
Sbjct: 13  KLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCS 71

Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
             E   +V EY+  GSL D L        L     + +A ++   + +L S    + +H 
Sbjct: 72  EEEPIYIVTEYMSKGSLLDFLK-SGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHR 127

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   NIL+  N V K++DFG++R +  +E          R   K    +  PE    G 
Sbjct: 128 DLAARNILVGENLVCKIADFGLARLIEDDE-------YTAREGAKFPIKWTAPEAANYGR 180

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
            T KSDV+SFGI+L  ++T GR P  G+T  EV   ++ G
Sbjct: 181 FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG 220

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  113 bits (284), Expect = 1e-27
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 46/236 (19%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML---HPHSLQGPSEFQQEIDILSKI-R 581
            +F     IGEG + ++     +    + AIK+L        +     + E ++L+++  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 582 HPNLVTLVGACPEVWT--------LVYEYLPNGSLED---RLSCKDNSPPLSWQTRIR-I 629
           HP ++ L       +T         V EY PNG L     +    D       +   R  
Sbjct: 61  HPGIIKLY------YTFQDEENLYFVLEYAPNGELLQYIRKYGSLD-------EKCTRFY 107

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L +LHS     I+H DLKP NILLD +   K++DFG ++ L  N    +N   
Sbjct: 108 AAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD 164

Query: 690 CCRTDPK------------GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
               D +            GT  Y+ PE L        SD+++ G I+ ++LTG+P
Sbjct: 165 ATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP 220

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 2e-26
 Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 27/208 (12%)

Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +G +   L+R        A+K+L    +    E +    E +ILS+I HP +V L
Sbjct: 1   LGKGSFGKVL--LVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL 58

Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKP 645
             A    E   LV EY P G L   LS        S + R R  A E+   L +LHS   
Sbjct: 59  HYAFQTEEKLYLVLEYAPGGELFSHLS---KEGRFS-EERARFYAAEIVLALEYLHS--- 111

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             I++ DLKP NILLDA+   KL+DFG+++ LS     S   T C      GT  Y+ PE
Sbjct: 112 LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC------GTPEYLAPE 163

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L         D +S G++L  +LTG+P
Sbjct: 164 VLLGKGYGKAVDWWSLGVLLYEMLTGKP 191

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  107 bits (270), Expect = 4e-26
 Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 18/220 (8%)

Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G +++GL  +   VA+K L P ++  P +F  E  I+ K+RHP L+ L   C 
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
             E   +V E +  GSL + L        L     I +A ++ S + +L +    + +H 
Sbjct: 72  LEEPIYIVTELMKYGSLLEYLQ-GGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHR 127

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N+L+  N + K++DFG++R + ++   +       R   K    +  PE      
Sbjct: 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEA-------REGAKFPIKWTAPEAALYNR 180

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGIT-KEVQYALDTG 748
            + KSDV+SFGI+L  ++T GR P  G+T  EV   +D G
Sbjct: 181 FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG 220

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  106 bits (267), Expect = 1e-25
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 18/192 (9%)

Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV 595
           IG+G +G +  G  R  +VA+K L   S    + F  E  +++ +RHPNLV L+G   + 
Sbjct: 14  IGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQLLGVVLQG 72

Query: 596 WTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
             L  V EY+  GSL D L  +  +  ++   ++  A ++C  + +L        VH DL
Sbjct: 73  NPLYIVTEYMAKGSLVDYLRSRGRAV-ITLAQQLGFALDVCEGMEYLEEKN---FVHRDL 128

Query: 654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT 713
              N+L+  + V+K+SDFG+++  SQ + S            K    +  PE L   + +
Sbjct: 129 AARNVLVSEDLVAKVSDFGLAKEASQGQDSG-----------KLPVKWTAPEALREKKFS 177

Query: 714 PKSDVYSFGIIL 725
            KSDV+SFGI+L
Sbjct: 178 TKSDVWSFGILL 189

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  106 bits (265), Expect = 4e-25
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 50/222 (22%)

Query: 536 IGEGGYGSIYKGLL------RHMQ-VAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
           +GEG +G +YKG L           VAIK L      +   EF+QE +++S ++HPN+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSP---------------PLSWQTRIRIA 630
           L+G C   +   +++EYL +G L + L    NSP                L     + IA
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLV--RNSPHSDVGAESGDETVKSSLDCSDFLHIA 130

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS------ 684
            ++ + + +L S   H  VH DL   N L+      K+SDFG+SR     +I S      
Sbjct: 131 IQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSR-----DIYSADYYRV 182

Query: 685 -NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL 725
            + + L  R        +M PE +  G+ T +SD++SFG++L
Sbjct: 183 QSKSLLPVR--------WMPPEAILYGKFTTESDIWSFGVVL 216

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  104 bits (261), Expect = 1e-24
 Identities = 70/213 (32%), Positives = 98/213 (46%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVG 590
           KIG G +G +Y    L     +A+K +        +  E   E+ +L  ++HPNLV   G
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66

Query: 591 ACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHSCKP 645
              EV      +  EY   G+LE+ L           +  IR+ T +L   L +LHS   
Sbjct: 67  V--EVHREKVYIFMEYCSGGTLEELLEHGRILD----EHVIRVYTLQLLEGLAYLHSHG- 119

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT--DPKGTFAYMD 703
             IVH D+KPANI LD N V KL DFG +          NNTT          GT AYM 
Sbjct: 120 --IVHRDIKPANIFLDHNGVIKLGDFGCAV------KLKNNTTTMGEEVQSLAGTPAYMA 171

Query: 704 PEFLASGELTPK---SDVYSFGIILLRLLTGRP 733
           PE +  G+       +D++S G ++L + TG+ 
Sbjct: 172 PEVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  103 bits (259), Expect = 2e-24
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 27/207 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGA 591
           ++G G  G + K L R     + +         +  +Q   E+DIL K   P +V   GA
Sbjct: 8   ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGA 67

Query: 592 C---PEVWTLVYEYLPNGSLEDRL-SCKDNSP--PLSWQTRIRIATELCSVLIFLHSCKP 645
                ++  +  EY+  GSL+  L   +   P   L      +IA  +   L +LH    
Sbjct: 68  FYNNGDIS-ICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLHE--K 119

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H I+H D+KP+NIL+++    KL DFG+S  L  N ++             GT +YM PE
Sbjct: 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV-NSLAKTFV---------GTSSYMAPE 169

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGR 732
            +   + + KSD++S G+ L+ L TGR
Sbjct: 170 RIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  103 bits (259), Expect = 2e-24
 Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 27/212 (12%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           I +G YG ++  L +        AIK++    +   ++  Q   E DILS+ + P +V L
Sbjct: 1   ISKGAYGRVF--LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL 58

Query: 589 VGACPEVWTL--VYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             +      L  V EYLP G   SL + +   D         RI IA E+   L +LHS 
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDED-----VARIYIA-EIVLALEYLHS- 111

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI--SSNNTTLCCRTDPKGTFAY 701
             + I+H DLKP NIL+D+N   KL+DFG+S+          +++     R    GT  Y
Sbjct: 112 --NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRI--VGTPDY 167

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           + PE +     +   D +S G IL   L G P
Sbjct: 168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIP 199

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  102 bits (256), Expect = 3e-24
 Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 28/209 (13%)

Query: 535 KIGEGGYGSIYKG-----LLRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           K+G+G +G + +G       + + VA+K L    L     +F +E  I+  + H NL+ L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 589 VGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G    V T    +V E  P GSL DRL  KD        T    A ++ + + +L S  
Sbjct: 62  YGV---VLTHPLMMVTELAPLGSLLDRLR-KDALGHFLISTLCDYAVQIANGMRYLES-- 115

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE---ISSNNTTLCCRTDPKGTFAY 701
               +H DL   NILL ++   K+ DFG+ R L QNE   +   +         K  FA+
Sbjct: 116 -KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL--------KVPFAW 166

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLT 730
             PE L +   +  SDV+ FG+ L  + T
Sbjct: 167 CAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  103 bits (258), Expect = 3e-24
 Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 30/215 (13%)

Query: 535 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNL 585
           ++GEG +G +     R+         QVA+K L+     Q  S+F++EI+IL  + H N+
Sbjct: 11  QLGEGHFGKVELC--RYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 586 VTLVGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           V   G C +       L+ EYLP+GSL D L  + +   ++ +  +  ++++C  + +L 
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYL--QRHRDQINLKRLLLFSSQICKGMDYLG 126

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE--ISSNNTTLCCRTDPKGTF 699
           S +    +H DL   NIL+++  + K+SDFG+++ L +++               P   F
Sbjct: 127 SQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEP----GESP--IF 177

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRP 733
            Y  PE L + + +  SDV+SFG+ L  L T G P
Sbjct: 178 WYA-PECLRTSKFSSASDVWSFGVTLYELFTYGDP 211

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  102 bits (257), Expect = 4e-24
 Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 51/249 (20%)

Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVT 587
           +GEG +G ++ G   H         VA+K L   +     + F++E ++L+  +H N+V 
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSP-------------PLSWQTRIRIATE 632
             G C E     +V+EY+ +G L   L  + + P              L+    ++IA +
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFL--RSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN------ 686
           + S +++L S      VH DL   N L+  + V K+ DFG+SR     ++ + +      
Sbjct: 131 IASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFGMSR-----DVYTTDYYRVGG 182

Query: 687 -TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GR-PALGIT-KEVQ 742
            T L  R        +M PE +   + T +SDV+SFG++L  + T G+ P  G++ +EV 
Sbjct: 183 HTMLPIR--------WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234

Query: 743 YALDTGKLK 751
             +  G+L 
Sbjct: 235 ECITQGRLL 243

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  102 bits (257), Expect = 6e-24
 Identities = 70/208 (33%), Positives = 100/208 (48%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           K+GEG YG +YK   R  +    VA+K +   +  +G PS   +EI +L +++HPN+V L
Sbjct: 6   KLGEGTYGVVYKA--RDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKL 63

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             V        LV+EY     L+  L       PLS      I  +L   L + HS   H
Sbjct: 64  LDVIHTERKLYLVFEYCDM-DLKKYL--DKRPGPLSPNLIKSIMYQLLRGLAYCHS---H 117

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE- 705
            I+H DLKP NIL++ + V KL+DFG++R            T    T    T  Y  PE 
Sbjct: 118 RILHRDLKPQNILINRDGVLKLADFGLARA-----FGIPLRTY---THEVVTLWYRAPEI 169

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L S   +   D++S G I   ++TG+P
Sbjct: 170 LLGSKHYSTAVDIWSVGCIFAEMITGKP 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score =  100 bits (251), Expect = 2e-23
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 25/256 (9%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++ G    H +VAIK L   S+  P  F  E +++ +++HP LV L     
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L   +    L+    I +A ++   + F+      + +H D
Sbjct: 72  QEPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIER---KNYIHRD 127

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 128 LRAANILVSETLCCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 180

Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQL 769
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G       P   + P    E+L
Sbjct: 181 TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM----PRPDNCP----EEL 232

Query: 770 ANLAMRCCEMSRKSRP 785
             L   C +   + RP
Sbjct: 233 YELMRLCWKEKPEERP 248

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 99.8 bits (249), Expect = 3e-23
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 16/199 (8%)

Query: 536 IGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
           +G G +G ++ G  R  + VAIKM+   ++    +F +E  ++ K+ HPNLV L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 595 VWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
              +  V EY+ NG L + L  ++    L  +  + + +++C  + +L S   +  +H D
Sbjct: 71  QRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRD 125

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L   N L+  + V K+SDFG++R++  ++ +S+  T       K    +  PE       
Sbjct: 126 LAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT-------KFPVKWAPPEVFDYSRF 178

Query: 713 TPKSDVYSFGIILLRLLTG 731
           + KSDV+SFG+++  + + 
Sbjct: 179 SSKSDVWSFGVLMWEVFSE 197

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 99.4 bits (247), Expect = 4e-23
 Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 25/257 (9%)

Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 12  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 70

Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 126

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 179

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALG-ITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            T KSDV+SFGI+L  L T GR P  G + +EV   ++ G       P   + P    E 
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM----PCPPECP----ES 231

Query: 769 LANLAMRCCEMSRKSRP 785
           L +L  +C     + RP
Sbjct: 232 LHDLMCQCWRKEPEERP 248

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 98.6 bits (246), Expect = 7e-23
 Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 21/224 (9%)

Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +GS+ KG+        ++VA+K L   H   G  EF +E  +++++ HP +V L+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 590 GAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           G C  E   LV E  P G L   L  K     +       +A ++   + +L S      
Sbjct: 63  GVCKGEPLMLVMELAPLGPLLKYL--KKR-REIPVSDLKELAHQVAMGMAYLESKH---F 116

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH DL   N+LL     +K+SDFG+SR L      + +      T  +    +  PE + 
Sbjct: 117 VHRDLAARNVLLVNRHQAKISDFGMSRAL-----GAGSDYYRATTAGRWPLKWYAPECIN 171

Query: 709 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
            G+ + KSDV+S+G+ L    +   +P   +   EV   L++G+
Sbjct: 172 YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE 215

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 98.9 bits (247), Expect = 8e-23
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 31/265 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVT 587
            IG+G +G++ K  +R       +  K +   ++    E QQ   E++IL +++HPN+V 
Sbjct: 7   TIGKGSFGTVRK--VRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVR 63

Query: 588 ----LVGACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLH- 641
               ++    +   +V EY   G L   +  CK     +  +   RI T+L   L   H 
Sbjct: 64  YYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN 123

Query: 642 -SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
            S   ++++H DLKPANI LDAN   KL DFG+++ L      S+           GT  
Sbjct: 124 RSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL---GHDSSFAKTYV-----GTPY 175

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           YM PE L       KSD++S G ++  L    P      ++Q A    K+K         
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA---SKIKEGKFR---R 229

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP 785
            P+  + +L  +      +    RP
Sbjct: 230 IPYRYSSELNEVIKSMLNVDPDKRP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 97.5 bits (243), Expect = 2e-22
 Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 25/204 (12%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G +++GL +  ++VAIK+L    L    +FQ+E+  L ++RH +L++L   C 
Sbjct: 13  KLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS 72

Query: 594 E---VWTLVYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
               V+ ++ E +  GSL   L   +        L     I +A ++   + +L      
Sbjct: 73  VGEPVY-IITELMEKGSLLAFLRSPEGQVLPVASL-----IDMACQVAEGMAYLEE---Q 123

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           + +H DL   NIL+  + V K++DFG++R + ++   S++         K  + +  PE 
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDK--------KIPYKWTAPEA 175

Query: 707 LASGELTPKSDVYSFGIILLRLLT 730
            + G  + KSDV+SFGI+L  + T
Sbjct: 176 ASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|128780 smart00504, Ubox, Modified RING finger domain

 Score = 90.8 bits (226), Expect = 2e-22
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 821 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSA 880
            F CPI  EVM+DP +   G TYE  A++ WL S H T P+T  PL H++L+PNLAL+SA
Sbjct: 1   EFLCPISLEVMKDPVILPSGQTYERSAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSA 59

Query: 881 IQEW 884
           IQEW
Sbjct: 60  IQEW 63

Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination. Length = 63

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score =  102 bits (256), Expect = 3e-22
 Identities = 92/314 (29%), Positives = 137/314 (43%), Gaps = 43/314 (13%)

Query: 513 QFF-SDFSFS-EIEGATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS 568
           QFF S  S S  I     +      I  G  G+ YKG  +   MQ  +K ++  +    S
Sbjct: 673 QFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSS 732

Query: 569 EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E       + K++HPN+V L+G C   +   L++EY+   +L + L        LSW+ R
Sbjct: 733 EIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERR 782

Query: 627 IRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
            +IA  +   L FLH  C P ++V G+L P  I++D      L               S 
Sbjct: 783 RKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHL-------------RLSL 828

Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR----PALG----I 737
              LC  T    + AY+ PE   + ++T KSD+Y FG+IL+ LLTG+       G    I
Sbjct: 829 PGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSI 888

Query: 738 TKEVQYALDTGKLKNLLDP-LAGDWPFVQAE--QLANLAMRCCEMSRKSRPELGKDVWRV 794
            +  +Y      L   +DP + GD    Q E  ++ NLA+ C      +RP    DV + 
Sbjct: 889 VEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP-CANDVLKT 947

Query: 795 LEPMRASCGGSTSY 808
           LE    S     + 
Sbjct: 948 LESASRSSSSCVTG 961

Length = 968

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 96.9 bits (242), Expect = 5e-22
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 26/207 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
           KIGEG  G +YK   R    +VAIK +    L+  ++     EI I+   +HPN+V    
Sbjct: 26  KIGEGASGEVYKATDRATGKEVAIKKMR---LRKQNKELIINEILIMKDCKHPNIVDYYD 82

Query: 591 AC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI-RIATELCSVLIFLHSCKPH 646
           +     E+W +V EY+  GSL D ++   N   ++ + +I  +  E+   L +LHS    
Sbjct: 83  SYLVGDELW-VVMEYMDGGSLTDIITQ--NFVRMN-EPQIAYVCREVLQGLEYLHS---Q 135

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +++H D+K  NILL  +   KL+DFG +  L++ E S  N+ +       GT  +M PE 
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK-EKSKRNSVV-------GTPYWMAPEV 187

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           +   +  PK D++S GI+ + +  G P
Sbjct: 188 IKRKDYGPKVDIWSLGIMCIEMAEGEP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 97.0 bits (242), Expect = 5e-22
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
           +IGEG +G ++K   +  +    VA+K +    L+G  P++  +EI  L   +HP +V L
Sbjct: 7   RIGEGAHGIVFKA--KDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKL 64

Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +        + LV EY+P   L + L  +D   PL           L   + ++H+   +
Sbjct: 65  LDVFPHGSGFVLVMEYMP-SDLSEVL--RDEERPLPEAQVKSYMRMLLKGVAYMHA---N 118

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            I+H DLKPAN+L+ A+ V K++DFG++R  S+ E           +    T  Y  PE 
Sbjct: 119 GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL-------YSHQVATRWYRAPEL 171

Query: 707 L-ASGELTPKSDVYSFGIILLRLLTGRP 733
           L  + +  P  D+++ G I   LL G P
Sbjct: 172 LYGARKYDPGVDLWAVGCIFAELLNGSP 199

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 95.9 bits (238), Expect = 6e-22
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 17/220 (7%)

Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  I+ K+RH  LV L    
Sbjct: 12  VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-PEAFLQEAQIMKKLRHDKLVPLYAVV 70

Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V E++  GSL D L   D    L     + +A ++   + ++      + +H 
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFLKEGDGKY-LKLPQLVDMAAQIADGMAYIERM---NYIHR 126

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 179

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALG-ITKEVQYALDTG 748
            T KSDV+SFGI+L  L+T GR P  G + +EV   ++ G
Sbjct: 180 FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG 219

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 95.9 bits (239), Expect = 7e-22
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 50/271 (18%)

Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G + +G L+      + VAIK L    S +   +F  E  I+ +  HPN++ L 
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71

Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +   +  + EY+ NGSL+  L  ++N    +    + +   + S + +L      +
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFL--RENDGKFTVGQLVGMLRGIASGMKYLSE---MN 126

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD---- 703
            VH DL   NIL+++N V K+SDFG+SR L                D + T+        
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLE---------------DSEATYTTKGGKIP 171

Query: 704 -----PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG-KLKNLL 754
                PE +A  + T  SDV+SFGI++  +++   RP   ++ ++V  A++ G +L    
Sbjct: 172 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---- 227

Query: 755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            P   D P    +    L + C +  R  RP
Sbjct: 228 -PPPMDCPSALYQ----LMLDCWQKDRNERP 253

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 95.2 bits (237), Expect = 9e-22
 Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 27/229 (11%)

Query: 536 IGEGGYGSIYKG-------LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +GS+Y+G            +V++        +   + +QEI +LSK++HPN+V  
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 589 VGACPEVWTL-VY-EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-LCSVLIFLHSCKP 645
           +G   E   L ++ E +P GSL   L    + P    +  IR+ T  +   L +LH    
Sbjct: 68  LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFP----EPVIRLYTRQILLGLEYLHD--- 120

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            + VH D+K ANIL+D N V KL+DFG+++     ++   +         KG+  +M PE
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADFGMAK-----QVVEFSFAKSF----KGSPYWMAPE 171

Query: 706 FLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 753
            +A  G     +D++S G  +L + TG+P     + V      G+ K L
Sbjct: 172 VIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL 220

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 95.5 bits (238), Expect = 1e-21
 Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 30/211 (14%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIK-MLHPHSLQGPSEF-QQEIDILSKIRHPNLVTLVG 590
            +GEG YG + K   +     VAIK        +   +   +E+ +L ++RH N+V L  
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPP-----LSWQTRIRIATELCSVLIFLHSC 643
           A        LV+EY+    LE   +     PP       WQ        L   + + HS 
Sbjct: 68  AFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ--------LLQAIAYCHS- 118

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             H+I+H D+KP NIL+  + V KL DFG +R L         + L   TD   T  Y  
Sbjct: 119 --HNIIHRDIKPENILVSESGVLKLCDFGFARALRAR----PASPL---TDYVATRWYRA 169

Query: 704 PEFL-ASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L          DV++ G I+  LL G P
Sbjct: 170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 35/216 (16%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
           FD   K+GEG YGS+YK +  H +    VAIK++         E  +EI IL +   P +
Sbjct: 5   FDILEKLGEGSYGSVYKAI--HKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYI 60

Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLED--RLSCKDNSPPLSWQTRIRIATELCSV---L 637
           V   G+     ++W +V EY   GS+ D  +++ K     L+ +    IA  L      L
Sbjct: 61  VKYYGSYFKNTDLW-IVMEYCGAGSVSDIMKITNK----TLTEE---EIAAILYQTLKGL 112

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LHS   +  +H D+K  NILL+    +KL+DFG+S  L  + ++  NT +       G
Sbjct: 113 EYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQL-TDTMAKRNTVI-------G 161

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T  +M PE +       K+D++S GI  + +  G+P
Sbjct: 162 TPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 93.9 bits (233), Expect = 3e-21
 Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 16/196 (8%)

Query: 533 SLKIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
             +IG G +G ++ G  L   +VAIK +   ++    +F +E  ++ K+ HP LV L G 
Sbjct: 9   VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGV 67

Query: 592 CPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
           C E     LV+E++ +G L D L  +      S +T + +  ++C  + +L S    +++
Sbjct: 68  CTERSPICLVFEFMEHGCLSDYLRAQRGK--FSQETLLGMCLDVCEGMAYLES---SNVI 122

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  + 
Sbjct: 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWSSPEVFSF 175

Query: 710 GELTPKSDVYSFGIIL 725
            + + KSDV+SFG+++
Sbjct: 176 SKYSSKSDVWSFGVLM 191

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 93.6 bits (233), Expect = 5e-21
 Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 31/214 (14%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLH----PHSLQGPSEFQQEIDILSKIRHPNLVT- 587
            IG G    +Y    L  + +VAIK +       S+    E ++E+  +S+  HPN+V  
Sbjct: 8   VIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVD---ELRKEVQAMSQCNHPNVVKY 64

Query: 588 ----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL---IFL 640
               +VG   E+W LV  YL  GSL D +    +S P        IAT L  VL    +L
Sbjct: 65  YTSFVVGD--ELW-LVMPYLSGGSLLDIMK---SSYPRGGLDEAIIATVLKEVLKGLEYL 118

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS   +  +H D+K  NILL  +   K++DFG+S  L+     +       R    GT  
Sbjct: 119 HS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKV----RKTFVGTPC 171

Query: 701 YMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRP 733
           +M PE +        K+D++SFGI  + L TG  
Sbjct: 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAA 205

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 93.9 bits (234), Expect = 5e-21
 Identities = 73/224 (32%), Positives = 99/224 (44%), Gaps = 41/224 (18%)

Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
           IGEG YG +YK   +     VAIK++         E ++E +IL K   HPN+ T  GA 
Sbjct: 14  IGEGTYGKVYKARHKKTGQLVAIKIMDI-IEDEEEEIKEEYNILRKYSNHPNIATFYGAF 72

Query: 593 ---------PEVWTLVYEYLPNGSLED---RLSCKDNSPPLSWQTRIRIA---TELCSVL 637
                     ++W LV E    GS+ D    L  K       W     IA    E    L
Sbjct: 73  IKKNPPGNDDQLW-LVMELCGGGSVTDLVKGLRKKGKRLKEEW-----IAYILRETLRGL 126

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH    + ++H D+K  NILL  N   KL DFG+S  L  + +   NT +       G
Sbjct: 127 AYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL-DSTLGRRNTFI-------G 175

Query: 698 TFAYMDPEFLASGE-----LTPKSDVYSFGIILLRLLTGRPALG 736
           T  +M PE +A  E        +SDV+S GI  + L  G+P L 
Sbjct: 176 TPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 93.4 bits (232), Expect = 5e-21
 Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 22/203 (10%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 71

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNS--PPLSWQTRIRIATELCSVLIFLHSCKPHS 647
              P  + ++ E++  G+L D L   +      +     + +AT++ S + +L      +
Sbjct: 72  TREPPFY-IITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KN 124

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE L
Sbjct: 125 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESL 177

Query: 708 ASGELTPKSDVYSFGIILLRLLT 730
           A  + + KSDV++FG++L  + T
Sbjct: 178 AYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 93.1 bits (231), Expect = 5e-21
 Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 25/256 (9%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++ G    + +VA+K L P ++  P  F +E  I+ K+RH  LV L     
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 594 E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
           E    +V EY+  GSL D L   +    L     + +A ++ + + ++      + +H D
Sbjct: 72  EEPIYIVTEYMSKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIERM---NYIHRD 127

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+    V K++DFG++R +  NE ++       R   K    +  PE    G  
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRF 180

Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGI-TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 769
           T KSDV+SFGI+L  L+T GR P  G+  +EV   ++ G       P   D P      L
Sbjct: 181 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM----PCPQDCPI----SL 232

Query: 770 ANLAMRCCEMSRKSRP 785
             L ++C +   + RP
Sbjct: 233 HELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 93.4 bits (233), Expect = 7e-21
 Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 34/216 (15%)

Query: 535 KIGEGGYGSIYKGL-LRHMQ-VAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVG 590
           +IGEG YG +YK    +  + VA+K +   + +   P    +EI +L K+RHPN+V L  
Sbjct: 6   QIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK- 64

Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFL 640
              E+ T        +V+EY+ +  L   L   +   +     Q +     +L   L +L
Sbjct: 65  ---EIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTES---QIK-CYMKQLLEGLQYL 116

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H D+K +NIL++ + V KL+DFG++R  +    S++ T          T  
Sbjct: 117 HSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYT-KRNSADYTNRVI------TLW 166

Query: 701 YMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
           Y  PE L  +    P+ D++S G IL  L  G+P  
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 93.2 bits (232), Expect = 8e-21
 Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 31/211 (14%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVG 590
           KIGEG YG +YK    L    VAIK +      +G P    +EI +L ++ HPN++ L+ 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL- 64

Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSC 643
              +V+       LV+E++ +  L   +  KD    L  ++ I+    +L   L F HS 
Sbjct: 65  ---DVFRHKGDLYLVFEFM-DTDLYKLI--KDRQRGLP-ESLIKSYLYQLLQGLAFCHS- 116

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             H I+H DLKP N+L++   V KL+DFG++R        S        T    T  Y  
Sbjct: 117 --HGILHRDLKPENLLINTEGVLKLADFGLAR-----SFGSPVRPY---THYVVTRWYRA 166

Query: 704 PE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE  L     +   D++S G I   LL+ RP
Sbjct: 167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRP 197

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 92.5 bits (230), Expect = 1e-20
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 24/208 (11%)

Query: 536 IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           +G+G +G +YK   +   +  A K++   S +   +F  EIDILS+ +HPN+V L  A  
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              ++W L+ E+   G+L D +  +        Q R  +  ++   L FLHS   H ++H
Sbjct: 73  YENKLWILI-EFCDGGAL-DSIMLELERGLTEPQIRY-VCRQMLEALNFLHS---HKVIH 126

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-- 708
            DLK  NILL  +   KL+DFG+S        + N +TL  R    GT  +M PE +A  
Sbjct: 127 RDLKAGNILLTLDGDVKLADFGVS--------AKNKSTLQKRDTFIGTPYWMAPEVVACE 178

Query: 709 ---SGELTPKSDVYSFGIILLRLLTGRP 733
                    K+D++S GI L+ L    P
Sbjct: 179 TFKDNPYDYKADIWSLGITLIELAQMEP 206

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 92.3 bits (230), Expect = 1e-20
 Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
            IG+G +G +YK + +     VAIK++    +     + QQEI  LS+ R P +    G+
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGS 67

Query: 592 CPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             +   L  + EY   GS  D L        L       I  E+   L +LH       +
Sbjct: 68  FLKGSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGK---I 120

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+K ANILL      KL+DFG+S  L+   +S  NT +       GT  +M PE +  
Sbjct: 121 HRDIKAANILLSEEGDVKLADFGVSGQLTST-MSKRNTFV-------GTPFWMAPEVIKQ 172

Query: 710 GELTPKSDVYSFGIILLRLLTGRPAL 735
                K+D++S GI  + L  G P L
Sbjct: 173 SGYDEKADIWSLGITAIELAKGEPPL 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 91.8 bits (228), Expect = 1e-20
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 19/203 (9%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIK---MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           KIG+G +G +YKG+L+ + +VA+K      P  L+   +F QE +IL +  HPN+V L+G
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLK--RKFLQEAEILKQYDHPNIVKLIG 59

Query: 591 ACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
            C +   +  V E +P GSL   L  K N   +    ++ +  +  + + +L S    + 
Sbjct: 60  VCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSL--DAAAGMEYLES---KNC 114

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N V K+SDFG+SR       + ++     +  P     +  PE L 
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL---KQIP---IKWTAPEALN 168

Query: 709 SGELTPKSDVYSFGIILLRLLTG 731
            G  T +SDV+S+GI+L    + 
Sbjct: 169 YGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 91.8 bits (229), Expect = 3e-20
 Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 36/211 (17%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ------EIDILSKIRHPNL 585
           +G G +G +   L+RH       A+K+L    +    + +Q      E  IL  IRHP L
Sbjct: 9   LGTGSFGRVM--LVRHKGSGKYYALKILSKAKI---VKLKQVEHVLNEKRILQSIRHPFL 63

Query: 586 VTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V L G+  +   L  V EY+P G L   L  K    P     R   A ++   L +LHS 
Sbjct: 64  VNLYGSFQDDSNLYLVMEYVPGGELFSHLR-KSGRFPEP-VARFYAA-QVVLALEYLHSL 120

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT-TLCCRTDPKGTFAYM 702
               IV+ DLKP N+LLD++   K++DFG ++ +         T TLC      GT  Y+
Sbjct: 121 D---IVYRDLKPENLLLDSDGYIKITDFGFAKRV------KGRTYTLC------GTPEYL 165

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE + S       D ++ GI++  +L G P
Sbjct: 166 APEIILSKGYGKAVDWWALGILIYEMLAGYP 196

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 91.3 bits (227), Expect = 4e-20
 Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 47/275 (17%)

Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
           +G+G +G +Y+GL +         +VAIK ++ + S++   EF  E  ++ +    ++V 
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRL-SCK------DNSPPLSWQTRIRIATELCSV 636
           L+G      P +  +V E +  G L+  L S +          P + Q  I++A E+   
Sbjct: 74  LLGVVSTGQPTL--VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           + +L + K    VH DL   N ++  +   K+ DFG++R + + +          R   K
Sbjct: 132 MAYLAAKK---FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY--------RKGGK 180

Query: 697 GTFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE--VQYALDTGKL 750
           G     +M PE L  G  T KSDV+SFG++L  + T   +P  G++ E  +++ +D G L
Sbjct: 181 GLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL 240

Query: 751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                    D P    ++L  L   C + + K RP
Sbjct: 241 ---------DLPENCPDKLLELMRMCWQYNPKMRP 266

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 90.8 bits (225), Expect = 7e-20
 Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 56/299 (18%)

Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNL 585
           +GEG +G + K     ++       VA+KML  ++    SE +    E ++L ++ HP++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHV 65

Query: 586 VTLVGACP--EVWTLVYEYLPNGSLE------------------DRLSCKDNSP---PLS 622
           + L GAC       L+ EY   GSL                   +R S   ++P    L+
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
               I  A ++   + +L   K   +VH DL   N+L+      K+SDFG+SR + + + 
Sbjct: 126 MGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED- 181

Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE 740
                +   R+  +    +M  E L     T +SDV+SFG++L  ++T  G P  GI  E
Sbjct: 182 -----SYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236

Query: 741 VQYALDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
                   +L NLL      + P   +E++ NL + C +     RP    D+ + LE M
Sbjct: 237 --------RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF-ADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 89.9 bits (223), Expect = 7e-20
 Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 31/269 (11%)

Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G + +G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 590 G----ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           G    + P +  ++ E++ NG+L+  L   D        T I++   L  +   +     
Sbjct: 72  GVVTKSRPVM--IITEFMENGALDSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYLSE 124

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            + VH DL   NIL+++N V K+SDFG+SRFL  +   +++ T       K    +  PE
Sbjct: 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD---TSDPTYTSSLGGKIPIRWTAPE 181

Query: 706 FLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWP 762
            +A  + T  SDV+S+GI++  +++   RP   ++ ++V  A++    ++   P   D P
Sbjct: 182 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE----QDYRLPPPMDCP 237

Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDV 791
                 L  L + C +  R +RP+ G+ V
Sbjct: 238 TA----LHQLMLDCWQKDRNARPKFGQIV 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 90.2 bits (224), Expect = 8e-20
 Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 29/266 (10%)

Query: 536 IGEGGYGSIYKGLL----RHMQVAIKMLHPHSLQGPSEFQQ--------EIDILSKIRHP 583
           IG+G YG +Y  L       M V    L           Q+        EI+ L  + H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 584 NLVTLVG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N+V  +G     E  ++  EY+P GS+    SC         Q       ++   L +LH
Sbjct: 69  NIVQYLGFETTEEYLSIFLEYVPGGSIG---SCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S     I+H DLK  N+L+DA+ + K+SDFGIS+       +  N ++      +G+  +
Sbjct: 126 S---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSM------QGSVFW 176

Query: 702 MDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 759
           M PE + S     + K D++S G ++L +  GR      + +      G  ++   P+  
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS-APPIPP 235

Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRP 785
           D     +    +    C  ++  +RP
Sbjct: 236 DVSMNLSPVALDFLNACFTINPDNRP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 90.1 bits (224), Expect = 1e-19
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 30/194 (15%)

Query: 553 QVAIKMLHP----HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606
            VA+K+L P    ++ +   +F +E+ ILS++  PN+  L+G C       ++ EY+ NG
Sbjct: 48  LVAVKVLRPDASDNARE---DFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENG 104

Query: 607 SLEDRLS--------CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
            L   L            NS  LS+ T + +AT++ S + +L S    + VH DL   N 
Sbjct: 105 DLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC 161

Query: 659 LLDANFVSKLSDFGISRFLSQNEIS--SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           L+  N+  K++DFG+SR L  ++         L  R        +M  E +  G+ T KS
Sbjct: 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIR--------WMAWESVLLGKFTTKS 213

Query: 717 DVYSFGIILLRLLT 730
           DV++FG+ L  +LT
Sbjct: 214 DVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 89.5 bits (222), Expect = 2e-19
 Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 58/297 (19%)

Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
           IG+G +G +++    GLL +     VA+KML    S    ++FQ+E  ++++  HPN+V 
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 588 LVGACP--EVWTLVYEYLPNGSLEDRL-------------------SCKDNSPPLSWQTR 626
           L+G C   +   L++EY+  G L + L                    C  N  PLS   +
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR--FLSQNEISS 684
           + IA ++ + + +L   K    VH DL   N L+  N V K++DFG+SR  + +    +S
Sbjct: 133 LCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEV 741
            N  +  R        +M PE +     T +SDV+++G++L  + +   +P  G+  +EV
Sbjct: 190 ENDAIPIR--------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241

Query: 742 QYALDTGKLKNLLD--PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 796
            Y +  G + +  D  PL          +L NL   C       RP     + R+L+
Sbjct: 242 IYYVRDGNVLSCPDNCPL----------ELYNLMRLCWSKLPSDRPSFA-SINRILQ 287

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 93.8 bits (233), Expect = 2e-19
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 16/192 (8%)

Query: 553 QVAIKML---HPHSLQGPSEFQQEIDILSKIRHPNLVTLV--GACPEVWTL-VYEYLPNG 606
           +VAIK+L    P      + F++E  + +++ HPN+V L+  G  P      V+EY+P  
Sbjct: 5   EVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGR 64

Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV- 665
           +L + L+       L      R+  ++   L   H+     IVH DLKP NI++    V 
Sbjct: 65  TLREVLA---ADGALPAGETGRLMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTGVR 118

Query: 666 --SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGI 723
             +K+ DFGI   L      ++  TL   T+  GT  Y  PE L    +TP SD+Y++G+
Sbjct: 119 PHAKVLDFGIGTLLPGVR-DADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGL 177

Query: 724 ILLRLLTGRPAL 735
           I L  LTG+  +
Sbjct: 178 IFLECLTGQRVV 189

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 32/268 (11%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQE--ID---ILSKIRHP 583
           +F+   KIG+G +G ++K ++R     +  +    L   +  ++E  ID   +L+K+   
Sbjct: 1   DFEILNKIGKGSFGVVFK-VVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSS 59

Query: 584 NLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP---PLSWQTRIRIATELCSVLI 638
            ++    +  +   L  V EY  NG L   L  +   P      W+  I+I   L     
Sbjct: 60  YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA---- 115

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            LHS K   I+H D+K  N+ LDA    K+ D G+++ LS N   +N           GT
Sbjct: 116 HLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIV--------GT 164

Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 758
             Y+ PE         KSDV++ G++L    TG+         Q AL    ++ +  P++
Sbjct: 165 PYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA--NNQGALILKIIRGVFPPVS 222

Query: 759 GDWPFVQAEQLANLAMRCCEMSRKSRPE 786
               + Q  QLA L  +C     + RP+
Sbjct: 223 Q--MYSQ--QLAQLIDQCLTKDYRQRPD 246

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 87.4 bits (216), Expect = 5e-19
 Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 27/257 (10%)

Query: 535 KIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++     +H +VA+K + P S+     F  E +++  ++H  LV L     
Sbjct: 13  KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT 71

Query: 594 -EVWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E   ++ E++  GSL D L   + +  PL     I  + ++   + F+      + +H 
Sbjct: 72  KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 126

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+ A+ V K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGS 179

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            T KSDV+SFGI+L+ ++T GR P  G++  EV  AL+ G      +           E+
Sbjct: 180 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC--------PEE 231

Query: 769 LANLAMRCCEMSRKSRP 785
           L N+ MRC +   + RP
Sbjct: 232 LYNIMMRCWKNRPEERP 248

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 87.7 bits (217), Expect = 5e-19
 Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 50/284 (17%)

Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +++G+L+      + VAIK L P ++ +   +F  E  I+ +  H N++ L 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     ++ EY+ NG+L+  L   D        +  ++   L  +   +      +
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRDHDGE-----FSSYQLVGMLRGIAAGMKYLSDMN 127

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA------- 700
            VH DL   NIL+++N   K+SDFG+SR L                DP+GT+        
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLED--------------DPEGTYTTSGGKIP 173

Query: 701 --YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG-KLKNLL 754
             +  PE +A  + T  SDV+SFGI++  +++   RP   ++  EV  A++ G +L    
Sbjct: 174 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL---- 229

Query: 755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
            P   D P      +  L ++C +  R  RP    D+  +L+ +
Sbjct: 230 -PAPMDCP----SAVYQLMLQCWQQDRARRPRFV-DIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|203049 pfam04564, U-box, U-box domain

 Score = 81.2 bits (201), Expect = 7e-19
 Identities = 27/70 (38%), Positives = 38/70 (54%)

Query: 819 PPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALR 878
           P  F  PI  E+M+DP +   G TY+   ++  L S   T P T  PL H  L+PNL L+
Sbjct: 2   PDEFLDPITLELMKDPVILPSGITYDRSTIERHLLSVDPTDPFTREPLTHDQLIPNLELK 61

Query: 879 SAIQEWLQQH 888
             I  WL+++
Sbjct: 62  EKIDAWLEEN 71

This domain is related to the Ring finger pfam00097 but lacks the zinc binding residues. Length = 73

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 87.1 bits (216), Expect = 8e-19
 Identities = 80/278 (28%), Positives = 122/278 (43%), Gaps = 26/278 (9%)

Query: 527 THNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIR 581
             NF    KIG+G +  +YK   LL    VA+K +    +      Q   +EID+L ++ 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 582 HPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLI 638
           HPN++  + +  E   L  V E    G L   +   K     +  +T  +   +LCS L 
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            +HS     I+H D+KPAN+ + A  V KL D G+ RF S    ++++          GT
Sbjct: 121 HMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--------GT 169

Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 758
             YM PE +       KSD++S G +L  +   +      K   Y+L     K    PL 
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLP 229

Query: 759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 796
            D     +E+L +L  RC     + RP    D+  VL+
Sbjct: 230 AD---HYSEELRDLVSRCINPDPEKRP----DISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 36/213 (16%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGP----SEFQQEIDILSKIRH---PN 584
           IG G YG++Y+G   H+     VA+K++   +L  P    S+ Q+E+ +LS++R    PN
Sbjct: 9   IGRGAYGAVYRGK--HVPTGRVVALKII---NLDTPDDDVSDIQREVALLSQLRQSQPPN 63

Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           +    G+    P +W ++ EY   GS+   +     + P++ +    I  E+   L ++H
Sbjct: 64  ITKYYGSYLKGPRLW-IIMEYAEGGSVRTLM----KAGPIAEKYISVIIREVLVALKYIH 118

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                 ++H D+K ANIL+      KL DFG++  L+QN  SS  +T        GT  +
Sbjct: 119 K---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN--SSKRSTFV------GTPYW 167

Query: 702 MDPEFLASG-ELTPKSDVYSFGIILLRLLTGRP 733
           M PE +  G     K+D++S GI +  + TG P
Sbjct: 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNP 200

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 65/231 (28%), Positives = 93/231 (40%), Gaps = 54/231 (23%)

Query: 536 IGEGGYGSIYKGLLRHMQV-----AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G GG+G +    ++          +K  H            E +IL +  HP +V L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 591 -------------ACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
                         C   E+WT++ +    G  ++            +  R  IA   C 
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRD---RGLFDE------------YTARFYIA---CV 102

Query: 636 VLIF--LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT-TLCCR 692
           VL F  LH+     I++ DLKP N+LLD+N   KL DFG ++ L     S   T T C  
Sbjct: 103 VLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLK----SGQKTWTFC-- 153

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY 743
               GT  Y+ PE + +       D +S GI+L  LLTGRP  G   E   
Sbjct: 154 ----GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM 200

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 87.0 bits (215), Expect = 1e-18
 Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 66/299 (22%)

Query: 535 KIGEGGYGSIY----KGLLRHMQ------------VAIKMLHPHSLQGP-SEFQQEIDIL 577
           K+GEG +G ++    +GL   +             VA+KML     +   ++F +EI I+
Sbjct: 12  KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71

Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL---------EDRLSCKDNSPPLSWQTR 626
           S++++PN++ L+G C   +   ++ EY+ NG L         E   +  +N P +S    
Sbjct: 72  SRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL 131

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS--S 684
           + +A ++ S + +L S    + VH DL   N L+  ++  K++DFG+SR L   +     
Sbjct: 132 LYMAVQIASGMKYLASL---NFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188

Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA 744
               L  R        +M  E +  G+ T  SDV++FG+ L  + T      + KE  Y+
Sbjct: 189 GRAVLPIR--------WMAWESILLGKFTTASDVWAFGVTLWEMFT------LCKEQPYS 234

Query: 745 L--DTGKLKNLLDPLAGDWPFVQAEQ------------LANLAMRCCEMSRKSRPELGK 789
           L  D   ++N      G++   Q  Q            +  L MRC     K RP   K
Sbjct: 235 LLSDEQVIEN-----TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)

Query: 536 IGEGGYGSIYKGL-------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G+G +G +Y          L   QV      P + +  +  + EI +L  ++H  +V  
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            G     E  ++  EY+P GS++D+L        L+     +   ++   + +LHS   +
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHS---N 123

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK----GTFAYM 702
            IVH D+K ANIL D+    KL DFG S+ L          T+C          GT  +M
Sbjct: 124 MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ---------TICSSGTGMKSVTGTPYWM 174

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE ++      K+DV+S G  ++ +LT +P
Sbjct: 175 SPEVISGEGYGRKADVWSVGCTVVEMLTEKP 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 18/200 (9%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++ K+ H  LV L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 594 EVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +   +  V EY+ NG L + L  +++         + +  ++C  + +L S      +H 
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYL--REHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHR 124

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNE-ISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L+D     K+SDFG+SR++  +E  SS  +    R  P        PE L   
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLLYS 176

Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSDV++FG+++  + +
Sbjct: 177 KFSSKSDVWAFGVLMWEVYS 196

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 2e-18
 Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 28/210 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEF---QQEIDILSKIRHPNLVTLV 589
           +IG G YG +YK         VAIK++    L+   +F   QQEI +L + RHPN+V   
Sbjct: 10  RIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKECRHPNIVAYF 66

Query: 590 GA---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           G+     ++W +V EY   GSL+D    +    PLS      +  E    L +LH     
Sbjct: 67  GSYLRRDKLW-IVMEYCGGGSLQDIY--QVTRGPLSELQIAYVCRETLKGLAYLHETG-- 121

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+K ANILL  +   KL+DFG+S  L+   I+   + +       GT  +M PE 
Sbjct: 122 -KIHRDIKGANILLTEDGDVKLADFGVSAQLT-ATIAKRKSFI-------GTPYWMAPEV 172

Query: 707 LA---SGELTPKSDVYSFGIILLRLLTGRP 733
            A    G    K D+++ GI  + L   +P
Sbjct: 173 AAVERKGGYDGKCDIWALGITAIELAELQP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 85.3 bits (211), Expect = 3e-18
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)

Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPN 584
           IG G +GS+Y G+       +A+K +   S+   S+           +EI +L +++H N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V  +G+    +   +  EY+P GS+   L+          +  +R   ++   L +LH+
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVR---QILKGLNYLHN 124

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                I+H D+K ANIL+D     K+SDFGIS+ L  N +S+       R   +G+  +M
Sbjct: 125 ---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNG--ARPSLQGSVFWM 179

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            PE +     T K+D++S G +++ +LTG+
Sbjct: 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 84.6 bits (209), Expect = 6e-18
 Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 31/268 (11%)

Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 590 GA---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           G       V  +V EY+ NGSL+  L   D        T I++   L  +   +      
Sbjct: 72  GVVTKSKPV-MIVTEYMENGSLDAFLRKHDGQ-----FTVIQLVGMLRGIASGMKYLSDM 125

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE 
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTAPEA 180

Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPF 763
           +A  + T  SDV+S+GI++  +++   RP   ++ ++V  A++ G    L  P+  D P 
Sbjct: 181 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG--YRLPAPM--DCPA 236

Query: 764 VQAEQLANLAMRCCEMSRKSRPELGKDV 791
                L  L + C +  R  RP+  + V
Sbjct: 237 A----LHQLMLDCWQKDRNERPKFEQIV 260

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 84.1 bits (208), Expect = 6e-18
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 20/202 (9%)

Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILSKIRHPNLVTLVGA 591
           +G G +G ++  +       V IK +    +        Q E  +L  + HPN++     
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 592 CPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             E   L  V EY P G+L + +  + NS  L   T +    +   +L+ LH      I+
Sbjct: 68  FLEDKALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQ---ILLALHHVHTKLIL 123

Query: 650 HGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           H DLK  NILLD +  V K+ DFGIS+ LS    S   T +       GT  Y+ PE   
Sbjct: 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSSK--SKAYTVV-------GTPCYISPELCE 174

Query: 709 SGELTPKSDVYSFGIILLRLLT 730
                 KSD+++ G +L  L +
Sbjct: 175 GKPYNQKSDIWALGCVLYELAS 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 84.2 bits (208), Expect = 6e-18
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 21/259 (8%)

Query: 536 IGEGGYGSIYKGLLRHMQ-VAIKM--LHPHS-LQGPSEF---QQEIDILSKIRHPNLVTL 588
           +G+G YG++Y GL    Q +A+K   L   + L    E+   Q+E+D+L  ++H N+V  
Sbjct: 8   LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67

Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C +  T+    E++P GS+   L   +   PL      +   ++   + +LH+   +
Sbjct: 68  LGTCLDDNTISIFMEFVPGGSISSIL---NRFGPLPEPVFCKYTKQILDGVAYLHN---N 121

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH D+K  N++L  N + KL DFG +R L+   +   ++ +       GT  +M PE 
Sbjct: 122 CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNML--KSMHGTPYWMAPEV 179

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 766
           +       KSD++S G  +  + TG+P L     +      G  + L+  L    P   +
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL----PDSFS 235

Query: 767 EQLANLAMRCCEMSRKSRP 785
               +    C    +  RP
Sbjct: 236 AAAIDFVTSCLTRDQHERP 254

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 83.7 bits (207), Expect = 8e-18
 Identities = 72/206 (34%), Positives = 100/206 (48%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYK-GLLRHMQV-AIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
           K+G+G YGS+YK   L   Q  A+K +   S+  +   +   EI IL+ + HPN+++   
Sbjct: 7   KLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKE 66

Query: 591 ACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           A  +   L  V EY P G L   +S  K     +  Q   RI  +L   L  LH  K   
Sbjct: 67  AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--- 123

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK ANILL AN + K+ D GIS+ L +N      T +       GT  YM PE  
Sbjct: 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKN---MAKTQI-------GTPHYMAPEVW 173

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
                + KSD++S G +L  + T  P
Sbjct: 174 KGRPYSYKSDIWSLGCLLYEMATFAP 199

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 83.7 bits (207), Expect = 1e-17
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 22/213 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNL 585
           NF    K+GEG Y ++YKG  R     VA+K +H  + +G PS   +EI ++ +++H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 586 VTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V L  V        LV+EY+ +  L+  +        L   T      +L   + F   C
Sbjct: 61  VRLHDVIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAF---C 116

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRF--LSQNEISSNNTTLCCRTDPKGTFAY 701
             + ++H DLKP N+L++     KL+DFG++R   +  N  S+   TL           Y
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLW----------Y 166

Query: 702 MDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
             P+  L S   +   D++S G I+  ++TGRP
Sbjct: 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRP 199

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 83.9 bits (207), Expect = 1e-17
 Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 46/284 (16%)

Query: 535 KIGEGGYGSIYKGLL-----RHMQ-VAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVT 587
           ++GE  +G IYKG L      H Q VAIK L   +  Q   EFQQE  +++++ HPN+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 588 LVGACPEVW--TLVYEYLPNGSLEDRL---------SCKDNS-----PPLSWQTRIRIAT 631
           L+G   +     +++EYL  G L + L          C  +        L     + IA 
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
           ++ + + +L S   H  VH DL   NIL+      K+SD G+SR     EI S +     
Sbjct: 132 QIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISDLGLSR-----EIYSADYY--- 180

Query: 692 RTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDT 747
           R  PK      +M PE +  G+ +  SD++SFG++L  + +   +P  G +   Q  ++ 
Sbjct: 181 RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEM 238

Query: 748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
            + + LL P + D P     ++ +L   C +     RP   KD+
Sbjct: 239 VRKRQLL-PCSEDCP----PRMYSLMTECWQEGPSRRPRF-KDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 83.9 bits (207), Expect = 2e-17
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 35/220 (15%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++     +       M VA+K L   +L    +FQ+E ++L+ ++H ++V 
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 588 LVGAC--PEVWTLVYEYLPNGSLE--------DRLSCKDNSP-----PLSWQTRIRIATE 632
             G C   +   +V+EY+ +G L         D +   D  P      L     + IA++
Sbjct: 72  FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI--SSNNTTLC 690
           + S +++L S      VH DL   N L+ AN + K+ DFG+SR +   +      +T L 
Sbjct: 132 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 188

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
            R        +M PE +   + T +SDV+SFG+IL  + T
Sbjct: 189 IR--------WMPPESIMYRKFTTESDVWSFGVILWEIFT 220

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 83.8 bits (207), Expect = 2e-17
 Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 25/206 (12%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
           KIG+G  G++Y  +      +VAIK ++            EI ++ + +HPN+V  + + 
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85

Query: 592 --CPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
               E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   + 
Sbjct: 86  LVGDELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS---NQ 135

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL  +   KL+DFG    ++  +  S  +T+       GT  +M PE +
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMV------GTPYWMAPEVV 187

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
                 PK D++S GI+ + ++ G P
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 83.8 bits (208), Expect = 2e-17
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 36/217 (16%)

Query: 535 KIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSE---FQ--QEIDILSKIRHPNLVT 587
           K+GEG Y  +YK   +     VAIK +     +   +   F   +EI +L +++HPN++ 
Sbjct: 7   KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG 66

Query: 588 LVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFL 640
           L+    +V+       LV+E++    LE  +  KD S  L+    I+         L +L
Sbjct: 67  LL----DVFGHKSNINLVFEFME-TDLEKVI--KDKSIVLT-PADIKSYMLMTLRGLEYL 118

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTDPKGTF 699
           HS   + I+H DLKP N+L+ ++ V KL+DFG++R F S N   ++            T 
Sbjct: 119 HS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV---------TR 166

Query: 700 AYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            Y  PE    +       D++S G I   LL   P L
Sbjct: 167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL 203

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 83.2 bits (206), Expect = 2e-17
 Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 21/203 (10%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
            IGEG +G +Y+G+        + VA+K     +     E F QE  I+ +  HP++V L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G   E  VW +V E  P G L   L     S  L+  + I  + +L + L +L S +  
Sbjct: 73  IGVITENPVW-IVMELAPLGELRSYLQVNKYSLDLA--SLILYSYQLSTALAYLESKR-- 127

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             VH D+   N+L+ +    KL DFG+SR+L        +         K    +M PE 
Sbjct: 128 -FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKG-------KLPIKWMAPES 179

Query: 707 LASGELTPKSDVYSFGIILLRLL 729
           +     T  SDV+ FG+ +  +L
Sbjct: 180 INFRRFTSASDVWMFGVCMWEIL 202

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 22/224 (9%)

Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPS-EFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKG+         + VAIK+L   +    + E   E  +++ + HP++V L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 589 VGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C      L+ + +P G L D +  +++   +  Q  +    ++   + +L       
Sbjct: 75  LGICLSSQVQLITQLMPLGCLLDYV--RNHKDNIGSQYLLNWCVQIAKGMSYLEE---KR 129

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +VH DL   N+L+      K++DFG+++ L  +E   +          K    +M  E +
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYH------AEGGKVPIKWMALESI 183

Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTG 748
                T KSDV+S+G+ +  L+T   +P  GI   E+   L+ G
Sbjct: 184 LHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG 227

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 35/226 (15%)

Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + + +++     M  AIKML   + +    +F  E+++L K+  HPN++ L+
Sbjct: 10  IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69

Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELC 634
           GAC     L    EY P G+L D L                  +  L+ Q  ++ A+++ 
Sbjct: 70  GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
           + + +L        +H DL   N+L+  N  SK++DFG+SR                +T 
Sbjct: 130 TGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSR---------GEEVYVKKTM 177

Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T KSDV+SFG++L  +  L G P  G+T
Sbjct: 178 GRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 82.0 bits (202), Expect = 5e-17
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 22/205 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
           +IG+G +G +YKG+    +  VAIK++     +   E  QQEI +LS+   P +    G+
Sbjct: 11  RIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGS 70

Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS +    
Sbjct: 71  YLKGTKLW-IIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSERK--- 122

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL      KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPEVIK 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 175 QSAYDFKADIWSLGITAIELAKGEP 199

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 82.3 bits (203), Expect = 6e-17
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 42/227 (18%)

Query: 535 KIGEGGYGSIY----KGLLRHMQ--------------VAIKMLHPHSLQGP-SEFQQEID 575
           K+GEG +G ++    +G+ + M               VA+KML   + +   ++F +EI 
Sbjct: 12  KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 576 ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--------CKDNSPPLSWQT 625
           I+S+++ PN++ L+  C     L  + EY+ NG L   LS         K +   +S+ T
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131

Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS-- 683
            I +AT++ S + +L S    + VH DL   N L+  N+  K++DFG+SR L   +    
Sbjct: 132 LIFMATQIASGMKYLSSL---NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI 188

Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
                L  R        +M  E +  G+ T  SDV++FG+ L  +LT
Sbjct: 189 QGRAVLPIR--------WMSWESILLGKFTTASDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 81.2 bits (200), Expect = 7e-17
 Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 22/267 (8%)

Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
           NF    KIG G +  +Y+   LL  + VA+K +    L          +EID+L ++ HP
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFL 640
           N++    +  E     +V E    G L   +   K     +  +T  +   +LCS L  +
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     ++H D+KPAN+ + A  V KL D G+ RF S    ++++          GT  
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--------GTPY 171

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           YM PE +       KSD++S G +L  +   +      K   Y+L     +    PL  D
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 231

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRPEL 787
                +E+L  L   C     + RP++
Sbjct: 232 H---YSEELRQLVNMCINPDPEKRPDI 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 81.7 bits (201), Expect = 7e-17
 Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 22/205 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++     +   E  QQEI +LS+   P +    G+
Sbjct: 11  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70

Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS K    
Sbjct: 71  YLKDTKLW-IIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK--- 122

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL  +   KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPEVIK 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 175 QSAYDSKADIWSLGITAIELAKGEP 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 81.2 bits (200), Expect = 7e-17
 Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 18/220 (8%)

Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--VGA 591
           K+G G +G ++ G   +  +VA+K L P ++   + F +E +++  ++H  LV L  V  
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 71

Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
             E   ++ EY+  GSL D L   D    +     I  + ++   + ++      + +H 
Sbjct: 72  KEEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 127

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ AN+L+  + + K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGS 180

Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
            T KSDV+SFGI+L  ++T G+ P  G++  +V  AL  G
Sbjct: 181 FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG 220

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 80.8 bits (199), Expect = 8e-17
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 22/194 (11%)

Query: 536 IGEGGYGSIYKGLLRHMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
           IG+G +G +  G  R  +VA+K + +  + Q    F  E  +++++RH NLV L+G   E
Sbjct: 14  IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 595 ---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
                 +V EY+  GSL D L  +  S  L     ++ + ++C  + +L +   ++ VH 
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA---NNFVHR 126

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N+L+  + V+K+SDFG+++     E SS   T       K    +  PE L   +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDT------GKLPVKWTAPEALREKK 175

Query: 712 LTPKSDVYSFGIIL 725
            + KSDV+SFGI+L
Sbjct: 176 FSTKSDVWSFGILL 189

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 81.0 bits (200), Expect = 1e-16
 Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 30/237 (12%)

Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           E E         + +G+G YG +Y    L   +++AIK +     +      +EI + S 
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 580 IRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCK-----DNSPPLSWQTRIRIATE 632
           ++H N+V  +G+  E   + +  E +P GSL   L  K     DN   + + T+     +
Sbjct: 62  LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTK-----Q 116

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQ-NEISSNNTTLC 690
           +   L +LH  +   IVH D+K  N+L++  + V K+SDFG S+ L+  N  +   T   
Sbjct: 117 ILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT--- 170

Query: 691 CRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
                 GT  YM PE +  G       +D++S G  ++ + TG+P      E Q A+
Sbjct: 171 ------GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM 221

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 1e-16
 Identities = 84/248 (33%), Positives = 116/248 (46%), Gaps = 44/248 (17%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIR---HPNLV 586
           IGEG YG++YK   R +     VA+K +  P S +G P    +EI +L ++    HPN+V
Sbjct: 7   IGEGAYGTVYKA--RDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 587 TLVGAC--PEVW-----TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
            L+  C  P        TLV+E++ +  L   LS K   P L  +T   +  +L   + F
Sbjct: 65  RLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLS-KCPKPGLPPETIKDLMRQLLRGVDF 122

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS   H IVH DLKP NIL+ ++   K++DFG++R      I S    L   T    T 
Sbjct: 123 LHS---HRIVHRDLKPQNILVTSDGQVKIADFGLAR------IYSFEMAL---TSVVVTL 170

Query: 700 AYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD--- 755
            Y  PE  L S   TP  D++S G I   L   RP    T E        +L  + D   
Sbjct: 171 WYRAPEVLLQSSYATP-VDMWSVGCIFAELFRRRPLFRGTSEAD------QLDKIFDVIG 223

Query: 756 -PLAGDWP 762
            P   +WP
Sbjct: 224 LPSEEEWP 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 80.5 bits (199), Expect = 2e-16
 Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ------QEIDILSKIRHPN 584
            +GEG YG + K   +H +    VAIK      L+   +        +EI +L ++RH N
Sbjct: 8   LVGEGSYGMVMK--CKHKETGQIVAIKKF----LESEDDKMVKKIAMREIRMLKQLRHEN 61

Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           LV L+      +   LV+E++ +  L+D L    N   L      +   ++   + F HS
Sbjct: 62  LVNLIEVFRRKKRLYLVFEFVDHTVLDD-LEKYPNG--LDESRVRKYLFQILRGIEFCHS 118

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL-SQNEISSNNTTLCCRTDPKGTFAY 701
              H+I+H D+KP NIL+  + V KL DFG +R L +  E+          TD   T  Y
Sbjct: 119 ---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY---------TDYVATRWY 166

Query: 702 MDPEFLASGELTPKS-DVYSFGIILLRLLTGRP 733
             PE L       ++ D+++ G ++  +LTG P
Sbjct: 167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEP 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 80.6 bits (199), Expect = 2e-16
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 42/279 (15%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGP-SEFQQEIDILSKI 580
           N      +G G +G ++    + ++       V +K L     +   SEF++E+D+  K+
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 581 RHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRL------SCKDNSPPLSWQTRIRIATE 632
            H N+V L+G C E     ++ EY   G L+  L        K   PPLS + ++ + T+
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCC 691
           +   +  L +      VH DL   N L+ +    K+S   +S+   +       N  +  
Sbjct: 126 IALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPL 182

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG 748
           R        ++ PE +   + + KSDV+SFG+++  + T    P  G++ +EV   L  G
Sbjct: 183 R--------WLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG 234

Query: 749 KLKNLLDPLAGDWPFVQA--EQLANLAMRCCEMSRKSRP 785
           KL+          P  +    +L  L  RC  ++ K RP
Sbjct: 235 KLE---------LPVPEGCPSRLYKLMTRCWAVNPKDRP 264

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 79.9 bits (197), Expect = 2e-16
 Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 46/270 (17%)

Query: 535 KIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTL 588
           KIGEG +G     L++      Q  IK ++   +      E ++E+ +LS ++HPN+V  
Sbjct: 7   KIGEGSFGKAI--LVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY 64

Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP-----PLSWQTRIRIATELCSVLIFLH 641
             +  E   L  V +Y   G L  +++ +          L W        ++C  L  +H
Sbjct: 65  QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDW------FVQICLALKHVH 118

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             K   I+H D+K  NI L  +   KL DFGI+R L       N+T    RT   GT  Y
Sbjct: 119 DRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVL-------NSTVELART-CIGTPYY 167

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL-LDPLAGD 760
           + PE   +     KSD+++ G +L  + T          +++A + G +KNL L  + G 
Sbjct: 168 LSPEICENRPYNNKSDIWALGCVLYEMCT----------LKHAFEAGNMKNLVLKIIRGS 217

Query: 761 WPFVQAE---QLANLAMRCCEMSRKSRPEL 787
           +P V +     L NL  +  + + + RP +
Sbjct: 218 YPPVSSHYSYDLRNLVSQLFKRNPRDRPSV 247

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 35/226 (15%)

Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + K  ++     M  AIK +  ++ +    +F  E+++L K+  HPN++ L+
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELC 634
           GAC     L    EY P+G+L D L                  +  LS Q  +  A ++ 
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             + +L        +H DL   NIL+  N+V+K++DFG+SR                +T 
Sbjct: 123 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTM 170

Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T  SDV+S+G++L  +  L G P  G+T
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 24/207 (11%)

Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG+G +G +Y G L     + +  A+K L+    L+   +F +E  I+    HPN+++L+
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 63  GICLPSEGSPLV---VLPYMKHGDLRNFIRSETHNPTV--KDLIGFGLQVAKGMEYLASK 117

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD +F  K++DFG++R +   E  S +      T  K    +M 
Sbjct: 118 K---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN----HTGAKLPVKWMA 170

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT 730
            E L + + T KSDV+SFG++L  L+T
Sbjct: 171 LESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 79.6 bits (196), Expect = 2e-16
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 31/260 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-P 593
            IGEG +G++ +G     +VA+K +          F +E  +++K+ H NLV L+G    
Sbjct: 13  IIGEGEFGAVLQGEYTGQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKNLVRLLGVILH 70

Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
               +V E +  G+L + L  +  +  +S    ++ + ++   + +L S K   +VH DL
Sbjct: 71  NGLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLESKK---LVHRDL 126

Query: 654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT 713
              NIL+  + V+K+SDFG++R      +  +N+ L  +        +  PE L   + +
Sbjct: 127 AARNILVSEDGVAKVSDFGLARV---GSMGVDNSKLPVK--------WTAPEALKHKKFS 175

Query: 714 PKSDVYSFGIILLRLLT-GR---PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 769
            KSDV+S+G++L  + + GR   P + + KEV+  ++ G     ++P  G    V     
Sbjct: 176 SKSDVWSYGVLLWEVFSYGRAPYPKMSL-KEVKECVEKGY---RMEPPEGCPADVYV--- 228

Query: 770 ANLAMRCCEMSRKSRPELGK 789
             L   C E   K RP   K
Sbjct: 229 --LMTSCWETEPKKRPSFHK 246

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 79.9 bits (197), Expect = 2e-16
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 42/274 (15%)

Query: 536 IGEGGYGSIYKGLLRHM--------QVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLV 586
           +G G +G +Y+G    +        +VA+K L   +  Q   EF +E  ++S   HPN+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 587 TLVGAC--PEVWTLVYEYLPNGSL----EDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            L+G C   E   ++ E +  G L     D    +   P L+ +  + I  ++    ++L
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 641 HSCKPHSIVHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
              + H  +H DL   N L+     DA+ V K+ DFG++R + +++            + 
Sbjct: 123 E--QMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK------EGEG 173

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GR---PALGITKEVQYALDTGKLK 751
                +M PE L  G+ T +SDV+SFG+++  +LT G+   PAL   + +Q+    G+L+
Sbjct: 174 LLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQ 233

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                     P    +++  L   C       RP
Sbjct: 234 K---------PENCPDKIYQLMTNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 80.0 bits (197), Expect = 3e-16
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 25/208 (12%)

Query: 536 IGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPS-EFQQEIDILSKIRHPNLV 586
           +GEG +G +   L R+         QVA+K L P S      + ++EI+IL  + H N+V
Sbjct: 12  LGEGHFGKVE--LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 69

Query: 587 TLVGACPEVW----TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
              G C E       L+ E+LP+GSL++ L    N   ++ + +++ A ++C  + +L S
Sbjct: 70  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP--RNKNKINLKQQLKYAVQICKGMDYLGS 127

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                 VH DL   N+L+++    K+ DFG+++      I ++      + D      + 
Sbjct: 128 ---RQYVHRDLAARNVLVESEHQVKIGDFGLTK-----AIETDKEYYTVKDDLDSPVFWY 179

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT 730
            PE L   +    SDV+SFG+ L  LLT
Sbjct: 180 APECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 79.0 bits (195), Expect = 3e-16
 Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 18/208 (8%)

Query: 529 NFDPSLKIGEGGYGS--IYKGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILSKIRHPN 584
           ++ P   +G+G +G   +Y+       V  K ++   L          EI ILS ++HPN
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60

Query: 585 LVTLVGACPEVWTLV--YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           ++       +  TL+   EY   G+L D++  +        +  +    ++ S + ++H 
Sbjct: 61  IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQL-FEEEMVLWYLFQIVSAVSYIHK 119

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                I+H D+K  NI L    + KL DFGIS+ L  +E S   T +       GT  YM
Sbjct: 120 ---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILG-SEYSMAETVV-------GTPYYM 168

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT 730
            PE     +   KSD+++ G +L  LLT
Sbjct: 169 SPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 79.8 bits (197), Expect = 3e-16
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 37/218 (16%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
             D  +KIGEG  G +     +    QVA+K +     Q       E+ I+   +HPN+V
Sbjct: 20  YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79

Query: 587 T-----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVL- 637
                 LVG   E+W +V E+L  G+L D ++           TR+   +IAT   +VL 
Sbjct: 80  EMYSSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIATVCLAVLK 126

Query: 638 --IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
              FLH+     ++H D+K  +ILL ++   KLSDFG   F +Q  +S     +  R   
Sbjct: 127 ALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFG---FCAQ--VSKE---VPRRKSL 175

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            GT  +M PE ++      + D++S GI+++ ++ G P
Sbjct: 176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 20/205 (9%)

Query: 536 IGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V   
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 590 GACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           G C         LV EYLP GSL D L    +   L  +  +  A+++C  + +L S + 
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYLQ--KHRERLDHRKLLLYASQICKGMEYLGSKR- 128

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              VH DL   NIL+++    K+ DFG+++ L Q++          R   +    +  PE
Sbjct: 129 --YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK-----EYYKVREPGESPIFWYAPE 181

Query: 706 FLASGELTPKSDVYSFGIILLRLLT 730
            L   + +  SDV+SFG++L  L T
Sbjct: 182 SLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 79.7 bits (196), Expect = 4e-16
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 34/219 (15%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++     +       M VA+K L   S     +FQ+E ++L+ ++H ++V 
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSC-----------KDNSP-PLSWQTRIRIATEL 633
             G C E     +V+EY+ +G L   L             +D +P  L+    + IA+++
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI--SSNNTTLCC 691
            S +++L S      VH DL   N L+    V K+ DFG+SR +   +       T L  
Sbjct: 132 ASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 188

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           R        +M PE +   + T +SD++SFG++L  + T
Sbjct: 189 R--------WMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 80.1 bits (198), Expect = 4e-16
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 26/212 (12%)

Query: 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPN 584
           F    ++G+GGYG ++    +     VA+K +    L   +E +    E DIL+  +   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62

Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSW-QTRIRIATELCSVLIFLH 641
           LV L+ A    E   L  EY+P G     L+   N   LS    R  +A    +V     
Sbjct: 63  LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAV----D 115

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           +      +H DLKP N L+DA+   KL+DFG    LS+  ++  N+ +       G+  Y
Sbjct: 116 ALHELGYIHRDLKPENFLIDASGHIKLTDFG----LSKGIVTYANSVV-------GSPDY 164

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           M PE L         D +S G +L   L G P
Sbjct: 165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFP 196

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 78.5 bits (194), Expect = 5e-16
 Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 19/164 (11%)

Query: 572 QEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI 629
            E  IL ++ HP LV L  +    E   LV + L  G L   LS K      S + +++ 
Sbjct: 49  NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV---KFS-EEQVKF 104

Query: 630 -ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
              E+   L +LHS     I+H D+KP NILLD      ++DF I+  ++ +      T+
Sbjct: 105 WICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTS 158

Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                   GT  YM PE L     +   D +S G+     L G+
Sbjct: 159 TS------GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 79.6 bits (196), Expect = 5e-16
 Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 54/236 (22%)

Query: 535 KIGEGGYGSIY--------------------KGLLRHMQVAIKMLHPHSLQGP-SEFQQE 573
           K+GEG +G ++                    KG  R + VA+K+L P + +   ++F +E
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKG--RPLLVAVKILRPDANKNARNDFLKE 69

Query: 574 IDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK----------DNSPP- 620
           + ILS+++ PN++ L+G C   +   ++ EY+ NG L   LS            D  PP 
Sbjct: 70  VKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPA 129

Query: 621 -----LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
                +S+ + + +A ++ S + +L S    + VH DL   N L+  N   K++DFG+SR
Sbjct: 130 HCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDLATRNCLVGENLTIKIADFGMSR 186

Query: 676 FLSQNEIS--SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
            L   +         L  R        +M  E +  G+ T  SDV++FG+ L  +L
Sbjct: 187 NLYAGDYYRIQGRAVLPIR--------WMAWECILMGKFTTASDVWAFGVTLWEIL 234

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 78.5 bits (193), Expect = 5e-16
 Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 29/214 (13%)

Query: 529 NFDPSLKIGEGGYGSIY--KGLLRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
            ++   KIGEG +G IY  K         IK   L    ++     ++E+ +L+K++HPN
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCK-----DNSPPLSWQTRIRIATELCSVL 637
           +VT   +  E   L  V EY   G L  R++ +          LSW  +I +       L
Sbjct: 61  IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG------L 114

Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
             +H  K   I+H D+K  NI L  N  V+KL DFGI+R L       N++     T   
Sbjct: 115 KHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQL-------NDSMELAYT-CV 163

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           GT  Y+ PE   +     K+D++S G +L  L T
Sbjct: 164 GTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 78.4 bits (193), Expect = 6e-16
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 16/199 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G  R  ++VAIK ++  ++    +F +E  ++ K+ HP LV L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS-EEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 594 EVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +   L  V E++ NG L + L  +     LS    + +  ++C  + +L     +S +H 
Sbjct: 70  QQKPLYIVTEFMENGCLLNYL--RQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHR 124

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+ +  V K+SDFG++R++  +E +S+       +  K    +  PE     +
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS-------SGAKFPVKWSPPEVFNFSK 177

Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + T
Sbjct: 178 YSSKSDVWSFGVLMWEVFT 196

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 78.7 bits (194), Expect = 7e-16
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 19/164 (11%)

Query: 572 QEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           +E+ I+ + R P +V+  GA      +  +  E++  GSL DR+  K    P+  +   +
Sbjct: 52  RELQIMHECRSPYIVSFYGAFLNENNI-CMCMEFMDCGSL-DRIYKKGG--PIPVEILGK 107

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           IA  +   L +L++   H I+H D+KP+NIL+++    KL DFG+S  L    I+S   T
Sbjct: 108 IAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL----INSIADT 161

Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                   GT  YM PE +  G+ T KSDV+S GI ++ L  G+
Sbjct: 162 FV------GTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 78.4 bits (193), Expect = 8e-16
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 23/224 (10%)

Query: 569 EFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
             ++EI +++++ HP+++ ++GA  E   + L  E++  GS+   LS             
Sbjct: 49  ALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS---KYGAFKEAVI 105

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSN 685
           I    +L   L +LH    + I+H D+K AN+L+D+     +++DFG +  L        
Sbjct: 106 INYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL-------- 154

Query: 686 NTTLCCRTDPKG----TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV 741
                   + +G    T A+M PE L   +     DV+S G +++ + T +P     K  
Sbjct: 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS 214

Query: 742 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +     K+ +         P   +  L ++ +RC E+  + RP
Sbjct: 215 NHLALIFKIASATTA--PSIPEHLSPGLRDVTLRCLELQPEDRP 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 78.6 bits (193), Expect = 9e-16
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 32/224 (14%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQGPSEFQQEIDILSKI 580
           HN     ++GEG +G ++     ++        VA+K L   S     +F +E ++L+ +
Sbjct: 5   HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64

Query: 581 RHPNLVTLVGACPE--VWTLVYEYLPNGSLE--------DRLSCKDNSPP--LSWQTRIR 628
           +H ++V   G C E     +V+EY+ +G L         D +   + + P  L+    + 
Sbjct: 65  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI--SSNN 686
           IA ++ + +++L S      VH DL   N L+  N + K+ DFG+SR +   +      +
Sbjct: 125 IAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 181

Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           T L  R        +M PE +   + T +SDV+S G++L  + T
Sbjct: 182 TMLPIR--------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 78.2 bits (192), Expect = 9e-16
 Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 28/208 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
           +IG+G +G ++KG+    Q  VAIK++     +   E  QQEI +LS+   P +    G+
Sbjct: 11  RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70

Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKP 645
                ++W ++ EYL  GS  D L     + P       +IAT   E+   L +LHS K 
Sbjct: 71  YLKGTKLW-IIMEYLGGGSALDLL----RAGPFD---EFQIATMLKEILKGLDYLHSEKK 122

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H D+K AN+LL      KL+DFG++  L+  +I  N           GT  +M PE
Sbjct: 123 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPE 171

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +       K+D++S GI  + L  G P
Sbjct: 172 VIQQSAYDSKADIWSLGITAIELAKGEP 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 78.6 bits (193), Expect = 1e-15
 Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 30/229 (13%)

Query: 536 IGEGGYGSIYKGL------LRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
           +G G +G++YKG+         + VAIK+L+  +  GP    EF  E  I++ + HP+LV
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLV 72

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
            L+G C  P +  LV + +P+G L D +   KDN   +  Q  +    ++   +++L   
Sbjct: 73  RLLGVCLSPTI-QLVTQLMPHGCLLDYVHEHKDN---IGSQLLLNWCVQIAKGMMYLEE- 127

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               +VH DL   N+L+ +    K++DFG++R L  +E   N          K    +M 
Sbjct: 128 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN------ADGGKMPIKWMA 179

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
            E +   + T +SDV+S+G+ +  L+T  G+P  GI T+E+   L+ G+
Sbjct: 180 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE 228

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 78.2 bits (193), Expect = 1e-15
 Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 40/220 (18%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPH---SLQGPSEFQQEIDILSKIR 581
           + +    +G G +G ++  L+R        A+K++       L+       E  +L ++ 
Sbjct: 2   DLERIKTVGTGTFGRVH--LVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS 59

Query: 582 HPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           HP ++ L       WT        ++ EY+P G L   L    NS   S  T +  A+E+
Sbjct: 60  HPFIIRLF------WTEHDQRFLYMLMEYVPGGELFSYLR---NSGRFSNSTGLFYASEI 110

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
              L +LHS     IV+ DLKP NILLD     KL+DFG ++     ++     TLC   
Sbjct: 111 VCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLC--- 159

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
              GT  Y+ PE + S       D ++ GI++  +L G P
Sbjct: 160 ---GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYP 196

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 77.8 bits (192), Expect = 1e-15
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 47/242 (19%)

Query: 536 IGEGGYGSIYKGLLR-------HMQVAIKML----HPHSLQGPSEFQQEIDILSKI-RHP 583
           +GEG +G + K              VA+KML        L   S+   E++++  I +H 
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDL---SDLVSEMEMMKMIGKHK 76

Query: 584 NLVTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPP---------------LSWQT 625
           N++ L+G C +   ++ +V EY  +G+L D L  +   PP               L+ + 
Sbjct: 77  NIINLLGVCTQEGPLYVVV-EYAAHGNLRDFL--RARRPPGEYASPDDPRPPEETLTQKD 133

Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
            +  A ++   + FL S K    +H DL   N+L+  + V K++DFG++R +   +    
Sbjct: 134 LVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK 190

Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQY 743
                  T+ +    +M PE L     T +SDV+SFG++L  + T  G P  GI  E  +
Sbjct: 191 ------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244

Query: 744 AL 745
            L
Sbjct: 245 KL 246

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 78.7 bits (194), Expect = 2e-15
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 47/260 (18%)

Query: 501 SRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV----AI 556
           S   +SSS+      +  S SE+E          +IG G  G++YK  + H       A+
Sbjct: 54  SSSSSSSSASGSAPSAAKSLSELERVN-------RIGSGAGGTVYK--VIHRPTGRLYAL 104

Query: 557 KMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVW------TLVYEYLPNGSLE 609
           K+++  H      +  +EI+IL  + HPN+V     C +++       ++ E++  GSLE
Sbjct: 105 KVIYGNHEDTVRRQICREIEILRDVNHPNVVK----CHDMFDHNGEIQVLLEFMDGGSLE 160

Query: 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
                 +    L+      +A ++ S + +LH      IVH D+KP+N+L+++    K++
Sbjct: 161 GTHIADE--QFLA-----DVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIA 210

Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF----LASGELTPKS-DVYSFGII 724
           DFG+SR L+Q     N++         GT AYM PE     L  G     + D++S G+ 
Sbjct: 211 DFGVSRILAQTMDPCNSSV--------GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS 262

Query: 725 LLRLLTGRPALGITKEVQYA 744
           +L    GR   G+ ++  +A
Sbjct: 263 ILEFYLGRFPFGVGRQGDWA 282

Length = 353

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 77.5 bits (191), Expect = 2e-15
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 19/206 (9%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL-- 588
           KIGEG YG +YKG  +     VA+K +   S +   PS   +EI +L +++HPN+V L  
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD 66

Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V        L++E+L +  L+  L   D+ P   +     + + L  +L  +  C    +
Sbjct: 67  VLMQESRLYLIFEFL-SMDLKKYL---DSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FL 707
           +H DLKP N+L+D   V KL+DFG++R        +    +   T    T  Y  PE  L
Sbjct: 123 LHRDLKPQNLLIDNKGVIKLADFGLAR--------AFGIPVRVYTHEVVTLWYRAPEVLL 174

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
            S   +   D++S G I   + T +P
Sbjct: 175 GSPRYSTPVDIWSIGTIFAEMATKKP 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 77.5 bits (191), Expect = 2e-15
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLV 589
           ++GEG  GS+ K  L++  M  A+K +       P   +Q   E++I    + P +V   
Sbjct: 8   RLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYY 65

Query: 590 GACPEVWT----LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           GA  +  +    +  EY   GSL+      K     +  +   +IA  +   L +LHS K
Sbjct: 66  GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I+H D+KP+NILL      KL DFG+S  L    ++S   T        GT  YM P
Sbjct: 126 ---IIHRDIKPSNILLTRKGQVKLCDFGVSGEL----VNSLAGTFT------GTSFYMAP 172

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGR 732
           E +     +  SDV+S G+ LL +   R
Sbjct: 173 ERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 77.3 bits (190), Expect = 2e-15
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 43/274 (15%)

Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRLSC-------KDNSPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L             PP + Q  I++A E+   +
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 133 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------RKGGKG 181

Query: 698 TF--AYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 182 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 240

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                   D P    E++ +L   C + + K RP
Sbjct: 241 --------DQPDNCPERVTDLMRMCWQFNPKMRP 266

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 19/208 (9%)

Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
           NF    KIG G +  +Y+   LL    VA+K +    +      Q   +EID+L ++ HP
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFL 640
           N++  + +  E     +V E    G L   +   K     +  +T  +   +LCS +  +
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     ++H D+KPAN+ + A  V KL D G+ RF S    ++++          GT  
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--------GTPY 171

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRL 728
           YM PE +       KSD++S G +L  +
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 76.5 bits (188), Expect = 4e-15
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)

Query: 554 VAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYEYLPNGSL 608
           VA+K L      Q  S +++EI+IL  + H N+V   G C E       L+ EY+P GSL
Sbjct: 36  VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95

Query: 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668
            D L  K     L+    +  A ++C  + +LHS      +H DL   N+LLD + + K+
Sbjct: 96  RDYLP-KHK---LNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKI 148

Query: 669 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL 728
            DFG+++ + +            R D      +   E L   + +  SDV+SFG+ L  L
Sbjct: 149 GDFGLAKAVPEGHEYYR-----VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203

Query: 729 LT 730
           LT
Sbjct: 204 LT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 77.0 bits (189), Expect = 4e-15
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 35/226 (15%)

Query: 536 IGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + K  ++     M  AIK +  ++ +    +F  E+++L K+  HPN++ L+
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 590 GACPE--VWTLVYEYLPNGSLEDRLS-------------CKDNSPPLSWQTRIRIATELC 634
           GAC       L  EY P+G+L D L                  +  LS Q  +  A ++ 
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             + +L        +H DL   NIL+  N+V+K++DFG+SR                +T 
Sbjct: 135 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTM 182

Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T  SDV+S+G++L  +  L G P  G+T
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 76.2 bits (187), Expect = 5e-15
 Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 20/205 (9%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG Y +++KG   L    VA+K +   H    P    +E+ +L  ++H N+VTL  +
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                  TLV+EYL +  L+  L   DN   L     ++I   +  +L  L  C    I+
Sbjct: 72  IHTERCLTLVFEYLDS-DLKQYL---DNCGNLMSMHNVKIF--MFQLLRGLSYCHKRKIL 125

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
           H DLKP N+L++     KL+DFG++R  S    + +N  +        T  Y  P+  L 
Sbjct: 126 HRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV--------TLWYRPPDVLLG 177

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
           S E +   D++  G IL  + TGRP
Sbjct: 178 STEYSTPIDMWGVGCILYEMATGRP 202

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 76.3 bits (188), Expect = 5e-15
 Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 71/231 (30%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIK---------MLHPHSLQGPSEFQQEIDILSKIR 581
           KIGEG YG ++K   R+ +    VAIK         ++   +L+       EI +L +++
Sbjct: 8   KIGEGSYGVVFK--CRNRETGQIVAIKKFVESEDDPVIKKIALR-------EIRMLKQLK 58

Query: 582 HPNLVTLVGACPEVWT------LVYEYL-----------PNGSLEDRLSCKDNSPPLSWQ 624
           HPNLV L+    EV+       LV+EY            P G        K     + WQ
Sbjct: 59  HPNLVNLI----EVFRRKRKLHLVFEYCDHTVLNELEKNPRGV--PEHLIKK----IIWQ 108

Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
           T           L  ++ C  H+ +H D+KP NIL+      KL DFG +R L+      
Sbjct: 109 T-----------LQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD- 156

Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGRP 733
                   TD   T  Y  PE L  G+    P  DV++ G +   LLTG+P
Sbjct: 157 -------YTDYVATRWYRAPELLV-GDTQYGPPVDVWAIGCVFAELLTGQP 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 75.9 bits (187), Expect = 5e-15
 Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 44/216 (20%)

Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+GL R        +QVA+K L    S Q  S+F  E  I+SK  H N+V 
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSP------PLSWQTRIRIATELCSVLIF 639
           L+G   E     ++ E +  G L+  L  ++N P       L+ +  +  A     V   
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFL--RENRPRPERPSSLTMKDLLFCA---RDVAKG 128

Query: 640 LHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD-- 694
               + +  +H D+   N LL       V+K++DFG++R     +I         R    
Sbjct: 129 CKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR-----DIY--------RASYY 175

Query: 695 PKGTFA-----YMDPEFLASGELTPKSDVYSFGIIL 725
            KG  A     +M PE    G  T K+DV+SFG++L
Sbjct: 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL 211

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 76.3 bits (188), Expect = 6e-15
 Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 47/225 (20%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKM-LHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           KIG+G +G ++K   RH +    VA+K  L  +  +G P    +EI IL  ++H N+V L
Sbjct: 19  KIGQGTFGEVFKA--RHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 76

Query: 589 VGACPEVWT----------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--------RIA 630
           +  C    T          LV+E+           C+ +   L     +        ++ 
Sbjct: 77  IEICRTKATPYNRYKGSFYLVFEF-----------CEHDLAGLLSNKNVKFTLSEIKKVM 125

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
             L + L ++H  K   I+H D+K ANIL+  + + KL+DFG++R  S ++ S  N    
Sbjct: 126 KMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPN---- 178

Query: 691 CRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRP 733
             T+   T  Y  PE L  GE    P  D++  G I+  + T  P
Sbjct: 179 RYTNRVVTLWYRPPELLL-GERDYGPPIDMWGAGCIMAEMWTRSP 222

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 75.0 bits (184), Expect = 7e-15
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 20/196 (10%)

Query: 536 IGEGGYGSIYKGLLR-HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G+G +G ++KG L+    VA+K      P  L+   +F  E  IL +  HPN+V L+G 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK--IKFLSEARILKQYDHPNIVKLIGV 60

Query: 592 CPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
           C +     +V E +P G     L  K +   L  +  ++ A +  + + +L S    + +
Sbjct: 61  CTQRQPIYIVMELVPGGDFLSFLRKKKDE--LKTKQLVKFALDAAAGMAYLES---KNCI 115

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N V K+SDFG+SR       SS+          +    +  PE L  
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK-------QIPIKWTAPEALNY 168

Query: 710 GELTPKSDVYSFGIIL 725
           G  + +SDV+S+GI+L
Sbjct: 169 GRYSSESDVWSYGILL 184

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 75.6 bits (186), Expect = 8e-15
 Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 21/207 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           KIGEG YG +YK   R     +A+K   L       PS   +EI +L +++H N+V L  
Sbjct: 9   KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68

Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V    +   LV+EYL +  L+  +   D+SP  +   R+ I T L  +L  +  C  H +
Sbjct: 69  VVHSEKRLYLVFEYL-DLDLKKHM---DSSPDFAKNPRL-IKTYLYQILRGIAYCHSHRV 123

Query: 649 VHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-F 706
           +H DLKP N+L+D      KL+DFG++R             +   T    T  Y  PE  
Sbjct: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFG--------IPVRTFTHEVVTLWYRAPEIL 175

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           L S   +   D++S G I   ++  +P
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMVNQKP 202

Length = 294

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 75.6 bits (186), Expect = 1e-14
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 33/265 (12%)

Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL +    M+VA+KML P +     E    E+ I+S +  H N+V
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIV 102

Query: 587 TLVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
            L+GAC    P +  ++ EY   G L + L  K  S  L+ +  +  + ++   + FL S
Sbjct: 103 NLLGACTIGGPIL--VITEYCCYGDLLNFLRRKRESF-LTLEDLLSFSYQVAKGMAFLAS 159

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL--SQNEISSNNTTLCCRTDPKGTFA 700
               + +H DL   N+LL    + K+ DFG++R +    N +   N  L  +        
Sbjct: 160 ---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVK-------- 208

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           +M PE + +   T +SDV+S+GI+L  + +    LG        +D+   K + +     
Sbjct: 209 WMAPESIFNCVYTFESDVWSYGILLWEIFS----LGSNPYPGMPVDSKFYKLIKEGYRMA 264

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP 785
            P     ++ ++   C +     RP
Sbjct: 265 QPEHAPAEIYDIMKTCWDADPLKRP 289

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 75.5 bits (185), Expect = 1e-14
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 29/208 (13%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAIK ++            EI ++ + ++PN+V      
Sbjct: 26  KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85

Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 86  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALDFLHS--- 133

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG    ++  +  S  +T+       GT  +M PE
Sbjct: 134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMV------GTPYWMAPE 185

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 75.0 bits (184), Expect = 1e-14
 Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 39/221 (17%)

Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVG 590
           +G G YG +YKG  RH++     AIK++   +     E + EI++L K   H N+ T  G
Sbjct: 24  VGNGTYGQVYKG--RHVKTGQLAAIKVMDV-TEDEEEEIKLEINMLKKYSHHRNIATYYG 80

Query: 591 A----CP-----EVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFL 640
           A     P     ++W LV E+   GS+ D + + K N+    W   I    E+   L  L
Sbjct: 81  AFIKKSPPGHDDQLW-LVMEFCGAGSVTDLVKNTKGNALKEDWIAYI--CREILRGLAHL 137

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H+   H ++H D+K  N+LL  N   KL DFG+S  L +  +   NT +       GT  
Sbjct: 138 HA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFI-------GTPY 186

Query: 701 YMDPEFLASGELTP------KSDVYSFGIILLRLLTGRPAL 735
           +M PE +A  E  P      +SD++S GI  + +  G P L
Sbjct: 187 WMAPEVIACDE-NPDATYDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 2e-14
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 30/211 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           KIGEG YG +YK   R       VA+K +      +G PS   +EI +L ++ HPN+V L
Sbjct: 6   KIGEGTYGVVYKA--RDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRL 63

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSCK 644
             V        LV+E+L +  L+  +   D+SP       +      +L   + + HS  
Sbjct: 64  LDVVHSENKLYLVFEFL-DLDLKKYM---DSSPLTGLDPPLIKSYLYQLLQGIAYCHS-- 117

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            H ++H DLKP N+L+D     KL+DFG++R        +    +   T    T  Y  P
Sbjct: 118 -HRVLHRDLKPQNLLIDREGALKLADFGLAR--------AFGVPVRTYTHEVVTLWYRAP 168

Query: 705 EFLASGEL--TPKSDVYSFGIILLRLLTGRP 733
           E L       TP  D++S G I   ++  RP
Sbjct: 169 EILLGSRQYSTP-VDIWSIGCIFAEMVNRRP 198

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 24/235 (10%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG Y ++YKG   L    VA+K +   H    P    +E+ +L  ++H N+VTL  +
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +  TLV+EYL +  L+  L    NS  +       +   L  +L  L+ C    ++
Sbjct: 73  IHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMH-----NVKLFLFQLLRGLNYCHRRKVL 126

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
           H DLKP N+L++     KL+DFG++R  S    + +N  +        T  Y  P+  L 
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV--------TLWYRPPDILLG 178

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWP 762
           S + + + D++  G I   + TGRP   G T E Q        + L  P    WP
Sbjct: 179 STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHF---IFRILGTPTEETWP 230

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 74.4 bits (182), Expect = 2e-14
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 29/208 (13%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 87  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 134

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG   F +Q  I+   +    R+   GT  +M PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQ--ITPEQSK---RSTMVGTPYWMAPE 186

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 74.0 bits (181), Expect = 3e-14
 Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 39/221 (17%)

Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVG 590
           +G G YG +YKG  RH++     AIK++     +   E +QEI++L K   H N+ T  G
Sbjct: 14  VGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYG 70

Query: 591 AC---------PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFL 640
           A           ++W LV E+   GS+ D + + K N+    W   I    E+   L  L
Sbjct: 71  AFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI--CREILRGLSHL 127

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H    H ++H D+K  N+LL  N   KL DFG+S  L +  +   NT +       GT  
Sbjct: 128 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFI-------GTPY 176

Query: 701 YMDPEFLASGELTP------KSDVYSFGIILLRLLTGRPAL 735
           +M PE +A  E  P      KSD++S GI  + +  G P L
Sbjct: 177 WMAPEVIACDE-NPDATYDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 74.3 bits (183), Expect = 3e-14
 Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 33/228 (14%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQG--PSEFQQEIDILSKIRH 582
            F+   +IGEG YG +Y+   R       VA+K +   + +   P    +EI +L  +RH
Sbjct: 8   EFEKLNRIGEGTYGIVYRA--RDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH 65

Query: 583 PNLVTL----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVL 637
           PN+V L    VG   +   LV EY      +D  S  DN P P S      +  +L   L
Sbjct: 66  PNIVELKEVVVGKHLDSIFLVMEYCE----QDLASLLDNMPTPFSESQVKCLMLQLLRGL 121

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS--QNEISSNNTTLCCRTDP 695
            +LH    + I+H DLK +N+LL      K++DFG++R        ++    TL      
Sbjct: 122 QYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLW----- 173

Query: 696 KGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
                Y  PE L      T   D+++ G IL  LL  +P L    E++
Sbjct: 174 -----YRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE 216

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 74.1 bits (182), Expect = 3e-14
 Identities = 68/216 (31%), Positives = 97/216 (44%), Gaps = 25/216 (11%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKM--LHPHSLQGPSEFQQEIDILSKIRH 582
           NF    KIGEG YG +YK   R+      VA+K   L   +   PS   +EI +L ++ H
Sbjct: 1   NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 58

Query: 583 PNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           PN+V L  V        LV+E+L     +D     D SP       + I + L  +L  L
Sbjct: 59  PNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASPLSGIPLPL-IKSYLFQLLQGL 113

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             C  H ++H DLKP N+L++     KL+DFG++R             +   T    T  
Sbjct: 114 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--------VPVRTYTHEVVTLW 165

Query: 701 YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           Y  PE  L     +   D++S G I   ++T R AL
Sbjct: 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 73.9 bits (182), Expect = 3e-14
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 13/91 (14%)

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H ++H D+KP+NILLDA+   KL DFGIS  L  ++          +T   G  AYM PE
Sbjct: 134 HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK---------AKTRSAGCAAYMAPE 184

Query: 706 FLASGELTPK----SDVYSFGIILLRLLTGR 732
            +   +  PK    +DV+S GI L+ L TG+
Sbjct: 185 RIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 74.5 bits (184), Expect = 4e-14
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 39/218 (17%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR-HPNLVTL 588
           K+G+G YG ++K + R     VA+K +   + +  ++ Q+   EI  L ++  HPN+V L
Sbjct: 14  KLGKGAYGIVWKAIDRRTKEVVALKKIF-DAFRNATDAQRTFREIMFLQELGDHPNIVKL 72

Query: 589 VGACPEV----WTLVYEYLPN--------GSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           +            LV+EY+            LED               +  I  +L   
Sbjct: 73  LNVIKAENDKDIYLVFEYMETDLHAVIRANILED-------------VHKRYIMYQLLKA 119

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L ++HS    +++H DLKP+NILL+++   KL+DFG++R LS+ E +  N  L   TD  
Sbjct: 120 LKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVL---TDYV 173

Query: 697 GTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRP 733
            T  Y  PE L  S   T   D++S G IL  +L G+P
Sbjct: 174 ATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKP 211

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 73.1 bits (179), Expect = 4e-14
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 31/264 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G ++ G LR  +  VA+K      P  L+  ++F QE  IL +  HPN+V L+
Sbjct: 2   RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLI 59

Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G C +     +V E +  G     L  +   P L  +  I++     + + +L S     
Sbjct: 60  GVCTQKQPIYIVMELVQGGDFLTFL--RTEGPRLKVKELIQMVENAAAGMEYLES---KH 114

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            +H DL   N L+    V K+SDFG+SR   + E     +T   +  P     +  PE L
Sbjct: 115 CIHRDLAARNCLVTEKNVLKISDFGMSR---EEEDGVYASTGGMKQIP---VKWTAPEAL 168

Query: 708 ASGELTPKSDVYSFGIILLRL--LTGRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
             G  + +SDV+SFGI+L     L   P   ++ ++ + A++ G     L       P +
Sbjct: 169 NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG---VRLPC-----PEL 220

Query: 765 QAEQLANLAMRCCEMSRKSRPELG 788
             + +  L  RC E     RP   
Sbjct: 221 CPDAVYRLMERCWEYDPGQRPSFS 244

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 73.3 bits (180), Expect = 4e-14
 Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 52/278 (18%)

Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +GEG +GS+ +G L       ++VA+K +    H+     EF  E   +    HPN++ L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 589 VGACPEVWTL--------VYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
           +G C E  +L        +  ++ +G L   L           L  QT ++   ++   +
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR------FLSQNEISSNNTTLCC 691
            +L +    + +H DL   N +L  +    ++DFG+S+      +  Q  I+        
Sbjct: 127 EYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIA-------- 175

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGI----ILLRLLTGRPALGITKEVQYALDT 747
               K    ++  E LA    T KSDV++FG+    I  R  T  P +   +   Y    
Sbjct: 176 ----KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG 231

Query: 748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +LK   D L         ++L +L   C     K RP
Sbjct: 232 NRLKQPEDCL---------DELYDLMYSCWRADPKDRP 260

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 73.6 bits (181), Expect = 5e-14
 Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 38/260 (14%)

Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQ-GPSEFQQ-------------EIDILSK 579
           +GEG YG + K    L    VAIK +    +    ++ +Q             E+ I+++
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76

Query: 580 IRHPNLVTLVGA-CPEVW-TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           I+H N++ LV       +  LV + +    L+  +   D    L+      I  ++ + L
Sbjct: 77  IKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVV---DRKIRLTESQVKCILLQILNGL 132

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS---SNNTTLCCR-- 692
             LH       +H DL PANI +++  + K++DFG++R       S   S + T+  R  
Sbjct: 133 NVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREE 189

Query: 693 -TDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 750
            T    T  Y  PE L  + +     D++S G I   LLTG+P      E+      G++
Sbjct: 190 MTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QLGRI 246

Query: 751 KNLL-DPLAGDWPFVQAEQL 769
             LL  P   +WP  QA++L
Sbjct: 247 FELLGTPNEDNWP--QAKKL 264

Length = 335

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 73.5 bits (180), Expect = 6e-14
 Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 24/239 (10%)

Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG Y +++KG   L    VA+K +   H    P    +E+ +L  ++H N+VTL  +
Sbjct: 13  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +  TLV+EYL     +D     D+   +     ++I   L  +L  L  C    ++
Sbjct: 73  VHTDKSLTLVFEYLD----KDLKQYMDDCGNIMSMHNVKIF--LYQILRGLAYCHRRKVL 126

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
           H DLKP N+L++     KL+DFG++R  S    + +N  +        T  Y  P+  L 
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV--------TLWYRPPDVLLG 178

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQA 766
           S E + + D++  G I   + +GRP   G T E +  L     + L  P    WP + +
Sbjct: 179 SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGISS 234

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 73.0 bits (180), Expect = 6e-14
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKML--HPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +I EG YG +Y+   R  +    VA+K L         P    +EI+IL K++HPN+VT+
Sbjct: 12  RIEEGTYGVVYRA--RDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTV 69

Query: 589 ----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
               VG+  +   +V EY+ +  L+  +  +    P        +  +L S +  LH   
Sbjct: 70  KEVVVGSNLDKIYMVMEYVEH-DLKSLM--ETMKQPFLQSEVKCLMLQLLSGVAHLHD-- 124

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            + I+H DLK +N+LL+   + K+ DFG++R     E  S        T    T  Y  P
Sbjct: 125 -NWILHRDLKTSNLLLNNRGILKICDFGLAR-----EYGSPLKPY---TQLVVTLWYRAP 175

Query: 705 E-FLASGELTPKSDVYSFGIILLRLLTGRP 733
           E  L + E +   D++S G I   LLT +P
Sbjct: 176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKP 205

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 71.9 bits (176), Expect = 9e-14
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 16/198 (8%)

Query: 534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           +++G G +G + KG+ +     + VAIK+L   + +    E  +E +I+ ++ +P +V +
Sbjct: 1   VELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRM 60

Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E   LV E    G L   LS K +   +S      +   +  V + +   +  +
Sbjct: 61  IGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVS-----NVVELMHQVSMGMKYLEGKN 115

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L      ++++    R+  K    +  PE +
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKAL-----GADDSYYKARSAGKWPLKWYAPECI 170

Query: 708 ASGELTPKSDVYSFGIIL 725
              + + +SDV+S+GI +
Sbjct: 171 NFRKFSSRSDVWSYGITM 188

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 72.2 bits (177), Expect = 9e-14
 Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 25/210 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGA 591
           ++G+G YGS+YK L R   V + M         S+F Q   E+DIL K   P +V   GA
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGA 67

Query: 592 CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   VY   EY+  GSL+   +    +  +      RI   +   L FL   + H+I
Sbjct: 68  F-FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK--EEHNI 124

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+KP N+L++ N   KL DFG+S        S   T + C++       YM PE + 
Sbjct: 125 IHRDVKPTNVLVNGNGQVKLCDFGVS---GNLVASLAKTNIGCQS-------YMAPERIK 174

Query: 709 SGEL------TPKSDVYSFGIILLRLLTGR 732
           SG        T +SDV+S G+ +L +  GR
Sbjct: 175 SGGPNQNPTYTVQSDVWSLGLSILEMALGR 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 72.4 bits (177), Expect = 1e-13
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G+G +G +YK   +      A K++   S +   ++  EI+IL+   HP +V L+GA 
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKPHSI 648
               ++W ++ E+ P G+++  +   D       + +I+ I  ++   L +LHS K   I
Sbjct: 79  YWDGKLWIMI-EFCPGGAVDAIMLELDRGLT---EPQIQVICRQMLEALQYLHSMK---I 131

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLK  N+LL  +   KL+DFG+S        + N  TL  R    GT  +M PE + 
Sbjct: 132 IHRDLKAGNVLLTLDGDIKLADFGVS--------AKNVKTLQRRDSFIGTPYWMAPEVVM 183

Query: 709 SGEL--TP---KSDVYSFGIILLRLLTGRP 733
              +  TP   K+D++S GI L+ +    P
Sbjct: 184 CETMKDTPYDYKADIWSLGITLIEMAQIEP 213

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 72.3 bits (177), Expect = 1e-13
 Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 32/248 (12%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG-PSEFQQEIDILSKIR---H 582
           ++P  +IG G YG++YK    H    VA+K +    +  G P    +E+ +L ++    H
Sbjct: 2   YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH 61

Query: 583 PNLVTLVGACPEVWT-------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
           PN+V L+  C    T       LV+E++ +  L   L  K   P L  +T   +  +   
Sbjct: 62  PNIVRLMDVCATSRTDRETKVTLVFEHV-DQDLRTYLD-KVPPPGLPAETIKDLMRQFLR 119

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            L FLH+   + IVH DLKP NIL+ +    KL+DFG++R      I S    L   T  
Sbjct: 120 GLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR------IYSCQMAL---TPV 167

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 755
             T  Y  PE L         D++S G I   +   +P      E   A   GK+ +L+ 
Sbjct: 168 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLGKIFDLIG 224

Query: 756 -PLAGDWP 762
            P   DWP
Sbjct: 225 LPPEDDWP 232

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 72.3 bits (178), Expect = 1e-13
 Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 38/232 (16%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPN 584
           +++   K+GEG +G +YK         VA+K +  H+ +   P    +EI IL K++HPN
Sbjct: 9   DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPN 68

Query: 585 LVTLVGACPEVWTLVYEYLPNGSLEDRLS--------CKDNSPPLSWQTRIR-------- 628
           +V L+        +  E  P+ S   R S          D S  L     ++        
Sbjct: 69  VVPLI-------DMAVER-PDKSKRKRGSVYMVTPYMDHDLSGLLE-NPSVKLTESQIKC 119

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
              +L   + +LH      I+H D+K ANIL+D   + K++DFG++R       +     
Sbjct: 120 YMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGG 176

Query: 689 LCCRTDPKG---TFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPAL 735
                       T  Y  PE L  GE   T   D++  G +   + T RP L
Sbjct: 177 GGGTRKYTNLVVTRWYRPPELLL-GERRYTTAVDIWGIGCVFAEMFTRRPIL 227

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 72.0 bits (176), Expect = 1e-13
 Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 31/214 (14%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
            +  +KIGEG  G +     +H   QVA+KM+     Q       E+ I+   +H N+V 
Sbjct: 23  LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVE 82

Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W L+ E+L  G+L D +S          QTR+   +IAT   SVL  
Sbjct: 83  MYKSYLVGE--ELWVLM-EFLQGGALTDIVS----------QTRLNEEQIATVCESVLQA 129

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S++        +  R    GT 
Sbjct: 130 LCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--------VPKRKSLVGTP 181

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++      + D++S GI+++ ++ G P
Sbjct: 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 72.0 bits (176), Expect = 2e-13
 Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 40/285 (14%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDILSKI 580
             ++   +IGEG YG ++K   R ++     VA+K +   + +   P    +E+ +L  +
Sbjct: 1   QQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 58

Query: 581 R---HPNLVTLVGACP-------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
               HPN+V L   C           TLV+E++ +  L   L  K   P +  +T   + 
Sbjct: 59  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKDMM 116

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            +L   L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R  S     ++     
Sbjct: 117 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-- 171

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 750
                  T  Y  PE L         D++S G I   +   +P    + +V      GK+
Sbjct: 172 -------TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKI 221

Query: 751 KNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKDV 791
            +++  P   DWP   A        +  +   K      ELGKD+
Sbjct: 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 266

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 71.6 bits (175), Expect = 2e-13
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G+G +G +YK   +   V  A K++   S +   ++  EIDIL+   HPN+V L+ A 
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                +W L+ E+   G++ D +  +   P    Q R+ +  +    L +LH  K   I+
Sbjct: 72  YYENNLWILI-EFCAGGAV-DAVMLELERPLTEPQIRV-VCKQTLEALNYLHENK---II 125

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL-- 707
           H DLK  NIL   +   KL+DFG+S        + N  T+  R    GT  +M PE +  
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFGVS--------AKNTRTIQRRDSFIGTPYWMAPEVVMC 177

Query: 708 ASGELTP---KSDVYSFGIILLRLLTGRP 733
            + +  P   K+DV+S GI L+ +    P
Sbjct: 178 ETSKDRPYDYKADVWSLGITLIEMAQIEP 206

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 71.4 bits (176), Expect = 2e-13
 Identities = 65/212 (30%), Positives = 95/212 (44%), Gaps = 33/212 (15%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQ--EIDILSKI-RHPNLVTLV 589
           ++G+G +GS+Y    +     VAIK +         E     E+  L K+  HPN+V L 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKMK-KKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 590 GACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHS 642
               EV+        V+EY+  G+L   L       P S ++ IR I  ++   L  +H 
Sbjct: 65  ----EVFRENDELYFVFEYM-EGNLYQ-LMKDRKGKPFS-ESVIRSIIYQILQGLAHIHK 117

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              H   H DLKP N+L+    V K++DFG++R     EI S        TD   T  Y 
Sbjct: 118 ---HGFFHRDLKPENLLVSGPEVVKIADFGLAR-----EIRSRPPY----TDYVSTRWYR 165

Query: 703 DPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE  L S   +   D+++ G I+  L T RP
Sbjct: 166 APEILLRSTSYSSPVDIWALGCIMAELYTLRP 197

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 70.1 bits (171), Expect = 4e-13
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)

Query: 536 IGEGGYGSIYKGL-------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G+G +G +Y          L   QV      P + +  S  + EI +L  ++H  +V  
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 589 VGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G   +      T+  EY+P GS++D+L        L+     +   ++   + +LHS  
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHS-- 124

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            + IVH D+K ANIL D+    KL DFG S+ L    I  + T +   T   GT  +M P
Sbjct: 125 -NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT--ICMSGTGIRSVT---GTPYWMSP 178

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E ++      K+DV+S G  ++ +LT +P
Sbjct: 179 EVISGEGYGRKADVWSLGCTVVEMLTEKP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 70.1 bits (171), Expect = 5e-13
 Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 43/276 (15%)

Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G+ +         +VAIK ++   S++   EF  E  ++ +    ++V
Sbjct: 13  ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 587 TLVGACPEVW-TLV-YEYLPNGSLEDRL----SCKDNSP---PLSWQTRIRIATELCSVL 637
            L+G   +   TLV  E +  G L+  L       +N+P   P S +  I++A E+   +
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 133 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--------RKGGKG 181

Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E  +++ ++ G L 
Sbjct: 182 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL- 240

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    + L  L   C + + K RP  
Sbjct: 241 --------DKPDNCPDMLFELMRMCWQYNPKMRPSF 268

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 69.7 bits (170), Expect = 5e-13
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 27/217 (12%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKIRHPN 584
           +F+   +IG G YG +YK   R++      AIK++     +  +  QQEI ++   +H N
Sbjct: 10  DFELIQRIGSGTYGDVYKA--RNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN 67

Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           +V   G+     ++W +  E+   GSL+D       + PLS      ++ E    L +LH
Sbjct: 68  IVAYFGSYLRRDKLW-ICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLH 123

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S      +H D+K ANILL  N   KL+DFG+S  ++         T+  R    GT  +
Sbjct: 124 S---KGKMHRDIKGANILLTDNGHVKLADFGVSAQIT--------ATIAKRKSFIGTPYW 172

Query: 702 MDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPAL 735
           M PE  A    G      D+++ GI  + L   +P +
Sbjct: 173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPM 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 69.9 bits (171), Expect = 6e-13
 Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 37/262 (14%)

Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVTLV 589
           +G G  G++YK   LL    +A+K++    L    E Q+    E++IL K   P ++   
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVI---PLDITVELQKQIMSELEILYKCDSPYIIGFY 65

Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           GA       ++  E++  GSL       D    +      RIA  +   L +L S K   
Sbjct: 66  GAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWSLK--- 115

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H D+KP+N+L++     KL DFG+S  L    ++S   T        GT AYM PE +
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQL----VNSIAKTYV------GTNAYMAPERI 165

Query: 708 ASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLD---PLAGDWPF 763
           +  +    SDV+S GI  + L  GR P   I K     +    L+ ++D   P+     F
Sbjct: 166 SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQF 225

Query: 764 VQAEQLANLAMRCCEMSRKSRP 785
             +E+  +   +C     K RP
Sbjct: 226 --SEKFVHFITQCMRKQPKERP 245

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 25/217 (11%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
           H+++   ++G G YG +YK   R++      A+K++        S  QQEI ++ + +H 
Sbjct: 9   HDYELIQRVGSGTYGDVYKA--RNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHC 66

Query: 584 NLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N+V   G+    E   +  EY   GSL+D       + PLS      +  E    L +LH
Sbjct: 67  NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLH 123

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S      +H D+K ANILL  N   KL+DFG++  ++         T+  R    GT  +
Sbjct: 124 S---KGKMHRDIKGANILLTDNGDVKLADFGVAAKIT--------ATIAKRKSFIGTPYW 172

Query: 702 MDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPAL 735
           M PE  A   +G      D+++ GI  + L   +P +
Sbjct: 173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPM 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 51/289 (17%)

Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVT 587
           +IG G +G +  G     +   +V +K L   +   P E   F QE+    ++ HPN++ 
Sbjct: 2   EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQ 59

Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
            +G C E   + LV E+ P G L++ L           Q  +  R+A E+ S L++LH  
Sbjct: 60  CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ- 118

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGI--SRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                +H DL   N  L A+   K+ D+G+   ++     I+ +   +  R        +
Sbjct: 119 --ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLR--------W 168

Query: 702 MDPEFLAS-------GELTPKSDVYSFGIILLRLLTGR----PALGITKEVQYALDTGKL 750
           + PE +          + T KS+++S G+ +  L T      P L   + ++  +    +
Sbjct: 169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI 228

Query: 751 K----NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 795
           K     L    +  W  V         M+ C +  ++RP   ++V  +L
Sbjct: 229 KLPKPQLDLKYSDRWYEV---------MQFCWLDPETRPTA-EEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 69.0 bits (168), Expect = 1e-12
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 23/205 (11%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
           KIG+G  G+++    +    +VAIK ++            EI ++ ++++PN+V  + + 
Sbjct: 26  KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85

Query: 592 -CPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   +V EYL  GSL D ++  C D +   +      +  E    L FLH+   + +
Sbjct: 86  LVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAA------VCRECLQALEFLHA---NQV 136

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K  N+LL  +   KL+DFG    ++  +  S  +T+       GT  +M PE + 
Sbjct: 137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--SKRSTMV------GTPYWMAPEVVT 188

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                PK D++S GI+ + ++ G P
Sbjct: 189 RKAYGPKVDIWSLGIMAIEMVEGEP 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 25/227 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
           ++G G +G++ KG+ +  +    VA+K+L   +   P+   E  +E +++ ++ +P +V 
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVR 60

Query: 588 LVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC-SVLIFLHSCKP 645
           ++G C  E W LV E    G L   L    +          +  TEL   V + +   + 
Sbjct: 61  MIGICEAESWMLVMELAELGPLNKFLQKNKH-------VTEKNITELVHQVSMGMKYLEE 113

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE
Sbjct: 114 TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE-----NYYKAKTHGKWPVKWYAPE 168

Query: 706 FLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
            +   + + KSDV+SFG+++    +   +P  G+   EV   +++G+
Sbjct: 169 CMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE 215

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 39/245 (15%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG Y ++YKG  +     VA+K +     +G P    +E  +L  ++H N+VTL  +
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDI 71

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS------- 642
               +  TLV+EYL            D    +           + +V +FL         
Sbjct: 72  IHTKKTLTLVFEYLD----------TDLKQYMDDCGGG---LSMHNVRLFLFQLLRGLAY 118

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS--QNEISSNNTTLCCRTDPKGTFA 700
           C    ++H DLKP N+L+      KL+DFG++R  S      S+   TL           
Sbjct: 119 CHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLW---------- 168

Query: 701 YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 759
           Y  P+  L S E +   D++  G I   + TGRP    + +V+  L     + L  P   
Sbjct: 169 YRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHK-IFRVLGTPTEE 227

Query: 760 DWPFV 764
            WP V
Sbjct: 228 TWPGV 232

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVT 587
           +GEG YG + K   RH +    VAIK       +   E ++    E+ +L  ++  N+V 
Sbjct: 9   VGEGAYGVVLK--CRHKETKEIVAIKKFKDS--EENEEVKETTLRELKMLRTLKQENIVE 64

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L  A        LV+EY+    LE      +  PP       ++ + +  ++  +H C  
Sbjct: 65  LKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP------EKVRSYIYQLIKAIHWCHK 118

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + IVH D+KP N+L+  N V KL DFG +R LS+   ++        T+   T  Y  PE
Sbjct: 119 NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN-------YTEYVATRWYRSPE 171

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L         D++S G IL  L  G+P
Sbjct: 172 LLLGAPYGKAVDMWSVGCILGELSDGQP 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 26/206 (12%)

Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ----QEIDILSKIRHPNLVTLV 589
           I +G +GS+Y  K        AIK+L    +   ++      +   ++ +   P +  L 
Sbjct: 4   ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63

Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            +    +   LV EYL  G      S       L      +   E+   +  LH      
Sbjct: 64  YSFQSKDYLYLVMEYLNGGDCA---SLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RG 117

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H D+KP N+L+D     KL+DFG+SR   +N+               GT  Y+ PE +
Sbjct: 118 IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK------------KFVGTPDYLAPETI 165

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
                   SD +S G ++   L G P
Sbjct: 166 LGVGDDKMSDWWSLGCVIFEFLFGYP 191

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 67.4 bits (164), Expect = 5e-12
 Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 44/225 (19%)

Query: 535 KIGEGGYGSIYKGLL-------RHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNL 585
           ++GE  +G +YKG L       +   VAIK L   + +GP   EF+ E  + S+++HPN+
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNI 70

Query: 586 VTLVGACP--EVWTLVYEYLPN----------------GSLEDRLSCKDNSPPLSWQTRI 627
           V L+G     +  ++++ Y  +                GS +D  + K    P  +   +
Sbjct: 71  VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADF---V 127

Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS--N 685
            I T++ + + FL S   H +VH DL   N+L+      K+SD G+ R +   +      
Sbjct: 128 HIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMG 184

Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           N+ L  R        +M PE +  G+ +  SD++S+G++L  + +
Sbjct: 185 NSLLPIR--------WMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 67.0 bits (163), Expect = 5e-12
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)

Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           +G+G +G +Y        R + V      P S +   E    + EI +L  + H  +V  
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 589 VGAC---PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G      E   ++  E++P GS++D+L    +   L+     +   ++   + +LHS  
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSIKDQLK---SYGALTENVTRKYTRQILEGVSYLHS-- 124

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            + IVH D+K ANIL D+    KL DFG S+ L    I  + T +   T   GT  +M P
Sbjct: 125 -NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT--ICLSGTGMKSVT---GTPYWMSP 178

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E ++      K+D++S G  ++ +LT +P
Sbjct: 179 EVISGEGYGRKADIWSVGCTVVEMLTEKP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 66.5 bits (162), Expect = 6e-12
 Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 22/201 (10%)

Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLH--PHSLQGPSEF---QQEIDILSKIRHPNLVT 587
           ++G+G +G++Y  K      +  +K+L   P     P+E     QE  +LSK+ HP +V 
Sbjct: 7   RLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVK 66

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
              +  E   + ++ EY     L+ +L   K     LS     ++      +L+ +H   
Sbjct: 67  FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLS---ENQVCEWFIQLLLGVHYMH 123

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I+H DLK  NI L  N + K+ DFG+SR L  +      TT        GT  YM P
Sbjct: 124 QRRILHRDLKAKNIFLKNNLL-KIGDFGVSRLLMGS--CDLATTF------TGTPYYMSP 174

Query: 705 EFLASGELTPKSDVYSFGIIL 725
           E L       KSD++S G IL
Sbjct: 175 EALKHQGYDSKSDIWSLGCIL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 66.7 bits (163), Expect = 7e-12
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 29/214 (13%)

Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKML-HPH--SLQGPSEFQQEIDILSKIRHPNLVT 587
             S+ I E    SIYKG+  + +V I+     H          + EI  L +I   N++ 
Sbjct: 23  YTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILK 82

Query: 588 LVG-------ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           + G         P + +L+ EY   G L + L   D    LS++T++ +A + C  L  L
Sbjct: 83  IYGFIIDIVDDLPRL-SLILEYCTRGYLREVL---DKEKDLSFKTKLDMAIDCCKGLYNL 138

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           +  K  +  + +L   + L+  N+  K+   G+ + LS     + N              
Sbjct: 139 Y--KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF-----------MV 185

Query: 701 YMDPEFLAS--GELTPKSDVYSFGIILLRLLTGR 732
           Y   + L     E T K D+YS G++L  + TG+
Sbjct: 186 YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK 219

Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 66.6 bits (163), Expect = 7e-12
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             I+H D+KP+NILLD N   KL DFGIS  L  + I+        +T   G   YM PE
Sbjct: 127 LKIIHRDVKPSNILLDRNGNIKLCDFGISGQL-VDSIA--------KTRDAGCRPYMAPE 177

Query: 706 FLASGELTP---KSDVYSFGIILLRLLTGR 732
            +          +SDV+S GI L  + TG+
Sbjct: 178 RIDPSARDGYDVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 66.7 bits (163), Expect = 7e-12
 Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 22/213 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSL-QG-PSEFQQEIDILSKIRHPN 584
            ++   KIGEG YG+++K   R     VA+K +      +G PS   +EI +L +++H N
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 585 LVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L  V    +  TLV+EY      +   SC  +  P   ++      +L   L F HS
Sbjct: 61  IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKS---FMFQLLKGLAFCHS 117

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              H+++H DLKP N+L++ N   KL+DFG++R        +    + C +    T  Y 
Sbjct: 118 ---HNVLHRDLKPQNLLINKNGELKLADFGLAR--------AFGIPVRCYSAEVVTLWYR 166

Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLT-GRP 733
            P+ L   +L   S D++S G I   L   GRP
Sbjct: 167 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 66.5 bits (162), Expect = 9e-12
 Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 23/205 (11%)

Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLV 586
           +G G +G+++KG+         + VAIK +   S  G   FQ+  D    +  + H  +V
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIV 72

Query: 587 TLVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            L+G CP     LV +  P GSL D +  + +   L  Q  +    ++   + +L     
Sbjct: 73  RLLGICPGASLQLVTQLSPLGSLLDHV--RQHRDSLDPQRLLNWCVQIAKGMYYLEE--- 127

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H +VH +L   NILL ++ + +++DFG++  L  ++           ++ K    +M  E
Sbjct: 128 HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY------FYSEHKTPIKWMALE 181

Query: 706 FLASGELTPKSDVYSFGIILLRLLT 730
            +  G  T +SDV+S+G+ +  +++
Sbjct: 182 SILFGRYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 66.7 bits (163), Expect = 1e-11
 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 28/209 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSK-IRHPNLVT 587
           IG+G +G +   L +H       A+K+L   ++    E +    E ++L K ++HP LV 
Sbjct: 3   IGKGSFGKVL--LAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 588 LVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCK 644
           L  +    +    V +Y+  G L   L  + + P    + R R  A E+ S L +LHS  
Sbjct: 61  LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFP----EPRARFYAAEIASALGYLHSLN 116

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I++ DLKP NILLD+     L+DFG+ +     E S   +T C      GT  Y+ P
Sbjct: 117 ---IIYRDLKPENILLDSQGHVVLTDFGLCK--EGIEHSKTTSTFC------GTPEYLAP 165

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L         D +  G +L  +L G P
Sbjct: 166 EVLRKQPYDRTVDWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 66.1 bits (162), Expect = 1e-11
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 45/218 (20%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKML--HPHSLQGPSEFQQEIDILSKIR-HPNLVT 587
           KIGEG +  + K   +  +     AIK +  H  SL+  +  + EI  L ++  HPN++ 
Sbjct: 6   KIGEGTFSEVLKA--QSRKTGKYYAIKCMKKHFKSLEQVNNLR-EIQALRRLSPHPNILR 62

Query: 588 LVGACPEV--------WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
           L+    EV          LV+E L + +L + +  K    PL  +       +L   L  
Sbjct: 63  LI----EVLFDRKTGRLALVFE-LMDMNLYELI--KGRKRPLPEKRVKSYMYQLLKSLDH 115

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR---TDPK 696
           +H    + I H D+KP NIL+  + + KL+DFG  R             +  +   T+  
Sbjct: 116 MHR---NGIFHRDIKPENILIKDDIL-KLADFGSCR------------GIYSKPPYTEYI 159

Query: 697 GTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            T  Y  PE  L  G   PK D+++ G +   +L+  P
Sbjct: 160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP 197

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 70/238 (29%), Positives = 105/238 (44%), Gaps = 48/238 (20%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNL 585
           FD   +IGEG YG +YK   +     VA+K +   +  +G P    +EI IL ++ H N+
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI 68

Query: 586 VTLVGACPEVWT----------------LVYEYLPN---GSLEDRLS--CKDNSPPLSWQ 624
           V L     E+ T                LV+EY+ +   G LE  L    +D+       
Sbjct: 69  VNLK----EIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDH------- 117

Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
               I + +  +L  L+ C   + +H D+K +NILL+     KL+DFG++R  +  E   
Sbjct: 118 ----IKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRP 173

Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEV 741
                   T+   T  Y  PE L   E   P  DV+S G IL  L T +P     +E+
Sbjct: 174 -------YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL 224

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 66.6 bits (163), Expect = 1e-11
 Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 52/231 (22%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQ----EIDILSK 579
             +     IGEG YG +     +   ++VAIK + P  H       F Q    EI IL +
Sbjct: 5   PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-----FCQRTLREIKILRR 59

Query: 580 IRHPNLVTL--------VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLS--------W 623
            +H N++ +          +  +V+ +V E +    L   +     +  LS        +
Sbjct: 60  FKHENIIGILDIIRPPSFESFNDVY-IVQELMET-DLYKLIK----TQHLSNDHIQYFLY 113

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
           Q  +R        L ++HS    +++H DLKP+N+LL+ N   K+ DFG++R        
Sbjct: 114 QI-LR-------GLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162

Query: 684 SNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
           +        T+   T  Y  PE  L S   T   D++S G IL  +L+ RP
Sbjct: 163 TGFL-----TEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRP 208

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)

Query: 554 VAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLVGACPEVWTL--VYEYLPNGSLE 609
           VA+KML   + +   S+   E++++  I +H N++ L+GAC +   L  + EY   G+L 
Sbjct: 50  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 109

Query: 610 DRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
           + L  +                  ++++  +    ++   + +L S K    +H DL   
Sbjct: 110 EYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAAR 166

Query: 657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           N+L+  N V K++DFG++R +  N I     T    T+ +    +M PE L     T +S
Sbjct: 167 NVLVTENNVMKIADFGLARDV--NNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQS 220

Query: 717 DVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           DV+SFG+++  + T  G P  GI  E  + L
Sbjct: 221 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 65.9 bits (160), Expect = 2e-11
 Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 23/249 (9%)

Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIR 581
           G   +++   K+GEG Y ++YKG   +    VA+K++     +G P    +E  +L  ++
Sbjct: 2   GKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK 61

Query: 582 HPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLI 638
           H N+V L  +    E  TLV+EY+      D     D  P       +++   +L   L 
Sbjct: 62  HANIVLLHDIIHTKETLTLVFEYVHT----DLCQYMDKHPGGLHPENVKLFLFQLLRGLS 117

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           ++H      I+H DLKP N+L+      KL+DFG++R  S    + +N  +        T
Sbjct: 118 YIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV--------T 166

Query: 699 FAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 757
             Y  P+  L S E +   D++  G I + ++ G  A    K++Q  L+   L  L  P 
Sbjct: 167 LWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV-LGTPN 225

Query: 758 AGDWPFVQA 766
              WP V +
Sbjct: 226 EDTWPGVHS 234

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
            D  +KIGEG  G +    ++     VA+K +     Q       E+ I+   +H N+V 
Sbjct: 22  LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81

Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IA    +VL  
Sbjct: 82  MYNSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLKA 128

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S+ E+    + +       GT 
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLV-------GTP 180

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++     P+ D++S GI+++ ++ G P
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 31/214 (14%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
            D  +KIGEG  G +     +H   QVA+K +     Q       E+ I+    H N+V 
Sbjct: 24  LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD 83

Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IAT   SVL  
Sbjct: 84  MYNSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIATVCLSVLRA 130

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL ++   KLSDFG    +S+ E+    + +       GT 
Sbjct: 131 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKSLV-------GTP 182

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++      + D++S GI+++ ++ G P
Sbjct: 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 59/276 (21%)

Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-----FQQEIDILSKIRHPNLV 586
           +G+G YG +   L+RH     Q  IK L   +L+  S       +QE  +LS+++HPN+V
Sbjct: 8   VGKGSYGEV--SLVRHRTDGKQYVIKKL---NLRNASRRERKAAEQEAQLLSQLKHPNIV 62

Query: 587 TLVGACPEVWT-------LVYEYLPNGSLEDRLSCKD-----NSPPLSWQTRIRIATELC 634
                  E W        +V  +   G L  +L  +       +  + W  +I +A    
Sbjct: 63  AY----RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA---- 114

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL-SQNEISSNNTTLCCRT 693
             L +LH      I+H DLK  N+ L    + K+ D GI+R L +Q +++S   TL    
Sbjct: 115 --LQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS---TLI--- 163

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI--TKEVQYALDTGKLK 751
              GT  YM PE  ++     KSDV++ G  +  + T + A        + Y +  GKL 
Sbjct: 164 ---GTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP 220

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
               P+  D+    + +L  L         + RP +
Sbjct: 221 ----PMPKDY----SPELGELIATMLSKRPEKRPSV 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.7 bits (157), Expect = 3e-11
 Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 22/209 (10%)

Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           +G G +G +Y        R + V      P S +   E    + EI +L  +RH  +V  
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 589 VGAC--PE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G    PE    ++  EY+P GS++D+L        L+     R   ++   + +LHS  
Sbjct: 70  YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHS-- 124

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            + IVH D+K ANIL D+    KL DFG S+ +    I  + T +   T   GT  +M P
Sbjct: 125 -NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT--ICMSGTGIKSVT---GTPYWMSP 178

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E ++      K+DV+S    ++ +LT +P
Sbjct: 179 EVISGEGYGRKADVWSVACTVVEMLTEKP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 65.6 bits (160), Expect = 3e-11
 Identities = 63/217 (29%), Positives = 89/217 (41%), Gaps = 41/217 (18%)

Query: 536 IGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +G+GGYG ++          G +  M+V  K     + +  +  + E +IL  ++HP +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 587 TLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE------LCSVLI 638
            L+ A        L+ EYL  G L   L             R  I  E      L  + +
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHLE------------REGIFMEDTACFYLSEISL 111

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPK 696
            L       I++ DLKP NILLDA    KL+DFG    L +  I       T C      
Sbjct: 112 ALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFG----LCKESIHEGTVTHTFC------ 161

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  YM PE L         D +S G ++  +LTG P
Sbjct: 162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP 198

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)

Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL-- 588
           K+GEG Y ++YKG+ R    + VA+K++   + +G P    +E  +L  ++H N+V L  
Sbjct: 12  KLGEGSYATVYKGISRINGQL-VALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70

Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHSCKPHS 647
           +    E  T V+EY+      D        P       +R+   +L   L ++H      
Sbjct: 71  IIHTKETLTFVFEYMHT----DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QH 123

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLS--QNEISSNNTTLCCRTDPKGTFAYMDPE 705
           I+H DLKP N+L+      KL+DFG++R  S      SS   TL           Y  P+
Sbjct: 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLW----------YRPPD 173

Query: 706 -FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDWPF 763
             L + + +   D++  G I + +L G+PA     +V   L+  K+  +L  P    WP 
Sbjct: 174 VLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE--KIWTVLGVPTEDTWP- 230

Query: 764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 795
                ++ L     E     +P+  + VW+ L
Sbjct: 231 ----GVSKLPNYKPEWFLPCKPQQLRVVWKRL 258

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 32/212 (15%)

Query: 538 EGGYGSIYKGLLRHM------QVAIKMLHPHSLQGPSEFQ-----QEIDILSKIRHPNLV 586
           EG +G I+ G+L         +V +K +  H+    SE Q     QE  +L  + H N++
Sbjct: 16  EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA----SEIQVTLLLQESCLLYGLSHQNIL 71

Query: 587 TLVGACPEVWT---LVYEYLPNGSLED-----RLSCKDNSPPLSWQTRIRIATELCSVLI 638
            ++  C E      ++Y Y+  G+L+      RL   +N   LS Q  + +A ++   + 
Sbjct: 72  PILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH      ++H D+   N ++D     K++D  +SR L   +        C   +    
Sbjct: 132 YLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH------CLGDNENRP 182

Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M  E L + E +  SDV+SFG++L  L+T
Sbjct: 183 VKWMALESLVNKEYSSASDVWSFGVLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 65.2 bits (159), Expect = 3e-11
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 29/208 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQ--QEIDILSKIRHPNLV 586
           +G+G +G ++  L+R +         A+K+L   +L+     +   E DIL+++ HP +V
Sbjct: 4   LGQGSFGKVF--LVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSC 643
            L  A        L+ ++L  G L  RLS       +  +  ++    EL   L  LHS 
Sbjct: 62  KLHYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL 117

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I++ DLKP NILLD     KL+DFG+S+    +E      + C      GT  YM 
Sbjct: 118 ---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC------GTVEYMA 166

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTG 731
           PE +     T  +D +SFG+++  +LTG
Sbjct: 167 PEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 4e-11
 Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 58/238 (24%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKML-------HPHSLQGPSEFQQEIDILSKIRHPN 584
           IG G +G ++  L+R        A+K+L               +  + E DIL+    P 
Sbjct: 9   IGRGAFGEVW--LVRDKDTGQVYAMKVLRKSDMIKRNQI----AHVRAERDILADADSPW 62

Query: 585 LVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           +V L       ++        LV EY+P G L + L  KD  P      R  IA EL   
Sbjct: 63  IVKLY------YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPE-ET-ARFYIA-ELVLA 113

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS----------RFLSQNEISSNN 686
           L  +H       +H D+KP NIL+DA+   KL+DFG+            +L+ +      
Sbjct: 114 LDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFR 170

Query: 687 TTLCCRTDPK-----------GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             +  R               GT  Y+ PE L       + D +S G+IL  +L G P
Sbjct: 171 DNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 65.6 bits (160), Expect = 4e-11
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 29/219 (13%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH---MQV-AIKMLHPHSLQGPSE---FQQEIDILSKI 580
            +FD    IG G +G +   L+RH    QV A+K+L    +   S+   F +E DI++  
Sbjct: 43  EDFDVIKVIGRGAFGEVQ--LVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA 100

Query: 581 RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
               +V L  A    +   +V EY+P G L + +S  D   P  W  R   A E+   L 
Sbjct: 101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD--IPEKW-ARFYTA-EVVLALD 156

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            +HS      +H D+KP N+LLD +   KL+DFG    +  N +   +T +       GT
Sbjct: 157 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAV-------GT 206

Query: 699 FAYMDPEFLAS----GELTPKSDVYSFGIILLRLLTGRP 733
             Y+ PE L S    G    + D +S G+ L  +L G  
Sbjct: 207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 245

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 64.8 bits (158), Expect = 5e-11
 Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 28/225 (12%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLV----T 587
           IG+G YG +   +  H   +VAIK ++     +   +   +EI +L  +RHP++V     
Sbjct: 8   IGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHI 67

Query: 588 LVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           ++      +    +V+E L    L   +   D+  P   Q  +    +L   L ++H+  
Sbjct: 68  MLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHHQFFL---YQLLRALKYIHTA- 122

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT-TLCCRTDPKGTFAYMD 703
             ++ H DLKP NIL +A+   K+ DFG++R      ++ N+T T    TD   T  Y  
Sbjct: 123 --NVFHRDLKPKNILANADCKLKICDFGLAR------VAFNDTPTAIFWTDYVATRWYRA 174

Query: 704 PEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD 746
           PE   S   + TP  D++S G I   +LTG+P L   K V + LD
Sbjct: 175 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP-LFPGKNVVHQLD 218

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 64.4 bits (157), Expect = 5e-11
 Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 28/206 (13%)

Query: 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQ---EIDILSKIRHPNLVTLV 589
           +G G  G + K L R   + +A K++H   L+  P+   Q   E+ +L +   P +V   
Sbjct: 9   LGAGNGGVVTKVLHRPSGLIMARKLIH---LEIKPAIRNQIIRELKVLHECNSPYIVGFY 65

Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           GA     E+ ++  E++  GSL D++  K    P +   +I IA  +   L +L   + H
Sbjct: 66  GAFYSDGEI-SICMEHMDGGSL-DQVLKKAGRIPENILGKISIA--VLRGLTYLR--EKH 119

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +YM PE 
Sbjct: 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRSYMSPER 169

Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L     T +SD++S G+ L+ +  GR
Sbjct: 170 LQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 63.7 bits (155), Expect = 5e-11
 Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 35/270 (12%)

Query: 536 IGEGGYGSIYK-------GLLRHMQVAIKMLHPHSLQGPSEFQQEID--------ILSKI 580
           +G G +G +YK         L  ++  I + +P   +   E  + I         I  ++
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALK-EINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66

Query: 581 RHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVL 637
           RHPN+V       E   L  V + +    L +   S K+     + +    I  ++   L
Sbjct: 67  RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLAL 126

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH  K   IVH DL P NI+L  +    ++DFG+++                 T   G
Sbjct: 127 RYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK---------LTSVVG 175

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 757
           T  Y  PE + +     K+DV++FG IL ++ T +P    T  +  A  T  ++ + +PL
Sbjct: 176 TILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA--TKIVEAVYEPL 233

Query: 758 AGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                 + +E + ++   C     ++RP++
Sbjct: 234 PEG---MYSEDVTDVITSCLTPDAEARPDI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 51/277 (18%)

Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +GEG +GS+ +G L      ++VA+K +     +     +F  E   + +  HPN++ L+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 590 GACPEVW--------TLVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVLI 638
           G C +           ++  ++ +G L   L      D    L  Q  ++  T++ S + 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR------FLSQNEISSNNTTLCCR 692
           +L S    S +H DL   N +L+ N    ++DFG+S+      +  Q  I+         
Sbjct: 127 YLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIA--------- 174

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGI----ILLRLLTGRPALGITKEVQYALDTG 748
              K    ++  E LA    T KSDV+SFG+    I  R  T  P +  ++   Y     
Sbjct: 175 ---KMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231

Query: 749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
           +LK   D L G         L +L   C  ++ K RP
Sbjct: 232 RLKQPPDCLDG---------LYSLMSSCWLLNPKDRP 259

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 63.9 bits (155), Expect = 7e-11
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 28/211 (13%)

Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y  + +     VAIK +     Q   ++Q   +E+  L K+RHPN +   
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G      T  LV EY   GS  D L    +  PL       +       L +LHS   H+
Sbjct: 82  GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HN 135

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL    + KL DFG     S + ++  N  +       GT  +M PE +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFG-----SASIMAPANXFV-------GTPYWMAPEVI 183

Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPAL 735
            +   G+   K DV+S GI  + L   +P L
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.1 bits (156), Expect = 7e-11
 Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 28/211 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y          VAIK +     Q   ++Q   +E+  L ++RHPN +   
Sbjct: 22  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81

Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G      T  LV EY   GS  D L    +  PL       I       L +LHS   H 
Sbjct: 82  GCYLREHTAWLVMEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHS---HE 135

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-F 706
            +H D+K  NILL      KL+DFG     S + +S  N+ +       GT  +M PE  
Sbjct: 136 RIHRDIKAGNILLTEPGTVKLADFG-----SASLVSPANSFV-------GTPYWMAPEVI 183

Query: 707 LA--SGELTPKSDVYSFGIILLRLLTGRPAL 735
           LA   G+   K DV+S GI  + L   +P L
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 63.8 bits (156), Expect = 9e-11
 Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 49/228 (21%)

Query: 535 KIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVT 587
            IG G YG +YK   ++ +     AIK       Q     Q   +EI +L +++H N+V+
Sbjct: 7   CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66

Query: 588 LVGACPE-----VWTLVYEYLPNGSLE----DRLSCKDNSPP-----LSWQTRIRIATEL 633
           LV    E     V+ L+++Y  +   +     R + + + PP     L WQ        +
Sbjct: 67  LVEVFLEHADKSVY-LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ--------I 117

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFGISRFL---SQNEISSNN 686
            + + +LHS   + ++H DLKPANIL+        V K+ D G++R      +     + 
Sbjct: 118 LNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDP 174

Query: 687 TTLCCRTDPKGTFAYMDPEF-LASGELTPKSDVYSFGIILLRLLTGRP 733
             +        T  Y  PE  L +   T   D+++ G I   LLT  P
Sbjct: 175 VVV--------TIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEP 214

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 28/211 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y     H    VA+K +     Q   ++Q   +E+  L +++HPN +   
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +  T  LV EY   GS  D L    +  PL       I       L +LHS   H+
Sbjct: 88  GCYLKEHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HN 141

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL      KL+DFG     S ++ S  N+ +       GT  +M PE +
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFG-----SASKSSPANSFV-------GTPYWMAPEVI 189

Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPAL 735
            +   G+   K DV+S GI  + L   +P L
Sbjct: 190 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 220

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 34/228 (14%)

Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHP 583
           T  ++    IG+G YG +YK   +      A+K+L P S     E + E +IL  +  HP
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHP 79

Query: 584 NLVTLVG--------ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR---IATE 632
           N+V   G           ++W LV E    GS+ + +        L    R+    I+  
Sbjct: 80  NVVKFYGMFYKADKLVGGQLW-LVLELCNGGSVTELVKGL-----LICGQRLDEAMISYI 133

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR 692
           L   L+ L     + I+H D+K  NILL      KL DFG+S  L+   +  N +     
Sbjct: 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV---- 189

Query: 693 TDPKGTFAYMDPEFLASGE-----LTPKSDVYSFGIILLRLLTGRPAL 735
               GT  +M PE +A  +        + DV+S GI  + L  G P L
Sbjct: 190 ----GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 63.3 bits (155), Expect = 1e-10
 Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 46/221 (20%)

Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ---------QEIDILSKIRHPN 584
           IG G YG +   +      +VAIK +          F          +EI +L  +RH N
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKISN-------VFDDLIDAKRILREIKLLRHLRHEN 60

Query: 585 LVTLVGACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCS 635
           ++ L+            +V+ +V E +    L   +       PL+    I+    ++  
Sbjct: 61  IIGLLDILRPPSPEDFNDVY-IVTELMET-DLHKVIKSPQ---PLTDD-HIQYFLYQILR 114

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--LCCRT 693
            L +LHS     ++H DLKP+NIL+++N   K+ DFG++R +  +E      T  +  R 
Sbjct: 115 GLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171

Query: 694 DPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
                  Y  PE  L+S   T   D++S G I   LLT +P
Sbjct: 172 -------YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKP 205

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 63.2 bits (154), Expect = 1e-10
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 11/104 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLH      I++ DLK  N+LLD+    K++DFG+ +   +  +    T+ 
Sbjct: 102 AAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCK---EGILGGVTTST 155

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C     GT  Y+ PE L+     P  D ++ G++L  +L G+ 
Sbjct: 156 FC-----GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQS 194

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 62.4 bits (152), Expect = 2e-10
 Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 35/214 (16%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ--QEIDILSKIRH-PNLVTL 588
           +G G YG + K  +RH+     +A+K +   ++    + +   ++DI  +    P  VT 
Sbjct: 9   LGRGAYGVVDK--MRHVPTGTIMAVKRI-RATVNSQEQKRLLMDLDISMRSVDCPYTVTF 65

Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
            GA     +VW  +   + + SL D+   K     L+    I  +IA  +   L +LHS 
Sbjct: 66  YGALFREGDVW--ICMEVMDTSL-DKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS- 121

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              S++H D+KP+N+L++ N   KL DFGIS +L  + ++        +T   G   YM 
Sbjct: 122 -KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV-DSVA--------KTIDAGCKPYMA 171

Query: 704 PEFLASGELTP-----KSDVYSFGIILLRLLTGR 732
           PE + + EL       KSDV+S GI ++ L TGR
Sbjct: 172 PERI-NPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 49/273 (17%)

Query: 536 IGEGGYGSIYKGLLRH------------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
           +G+G + +IYKG+LR             + V +K+L     +    F +   ++S++ H 
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS-DHRDSLAFFETASLMSQLSHK 61

Query: 584 NLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +LV L G C  +   +V EY+  G L+  L  + N+  L W  ++ +A +L S L +L  
Sbjct: 62  HLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119

Query: 643 CKPHSIVHGDLKPANILL---DAN-----FVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            K   +VHG++   NIL+     N     F+ KLSD GI              T+  R +
Sbjct: 120 KK---LVHGNVCGKNILVARYGLNEGYVPFI-KLSDPGIPI------------TVLSREE 163

Query: 695 PKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 752
                 ++ PE + +G+  LT  +D +SFG  LL + +       T          + ++
Sbjct: 164 RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH 223

Query: 753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            L     D       +LANL  +C       RP
Sbjct: 224 RLPMP--DCA-----ELANLINQCWTYDPTKRP 249

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 30/214 (14%)

Query: 552 MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACPE---VWTLVYEYLPNG 606
           + VA+KML   +  +  S+   E++++  I +H N++ L+GAC +   ++ LV EY   G
Sbjct: 45  VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLV-EYASKG 103

Query: 607 SLEDRL-------------SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
           +L + L             +CK     L+++  +  A ++   + +L S K    +H DL
Sbjct: 104 NLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDL 160

Query: 654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT 713
              N+L+  + V K++DFG++R    + I     T    T+ +    +M PE L     T
Sbjct: 161 AARNVLVTEDNVMKIADFGLAR--DVHNIDYYKKT----TNGRLPVKWMAPEALFDRVYT 214

Query: 714 PKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
            +SDV+SFG++L  + T  G P  GI  E  + L
Sbjct: 215 HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 41/240 (17%)

Query: 536 IGEGGYGSIYKGLL---------RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +              R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85

Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS++  +
Sbjct: 86  IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYCYNPTQVPEEQLSFKDLV 143

Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +  + I     
Sbjct: 144 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDYYKK 198

Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 199 T----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 62.3 bits (151), Expect = 3e-10
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 37/238 (15%)

Query: 536 IGEGGYGSIYK----GLLRHMQ-----VAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPN 584
           +GEG +G + +    G+ +        VA+KML  ++  +  ++   E++++  I +H N
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79

Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCK-----DNSP--------PLSWQTRIRI 629
           ++ L+G C +   L  + EY   G+L + L  +     D +          LS++  +  
Sbjct: 80  IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A ++   + +L S +    +H DL   N+L+  + V K++DFG++R +    I     T 
Sbjct: 140 AYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHD--IDYYKKTS 194

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
             R   K    +M PE L     T +SDV+SFGI++  + T  G P  GI  E  + L
Sbjct: 195 NGRLPVK----WMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 62.3 bits (151), Expect = 4e-10
 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 29/216 (13%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIR 581
           ++D    IG G +G +   L+RH       A+K+L    +   S+   F +E DI++   
Sbjct: 44  DYDVVKVIGRGAFGEVQ--LVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 101

Query: 582 HPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
            P +V L  A  +     +V EY+P G L + +S  D   P  W    +  T    V++ 
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---KFYT--AEVVLA 154

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L +     ++H D+KP N+LLD +   KL+DFG    + +  +   +T +       GT 
Sbjct: 155 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-------GTP 207

Query: 700 AYMDPEFLAS----GELTPKSDVYSFGIILLRLLTG 731
            Y+ PE L S    G    + D +S G+ L  +L G
Sbjct: 208 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 61.3 bits (148), Expect = 6e-10
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 28/211 (13%)

Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y  + +  +  VAIK +     Q   ++Q   +E+  L +I+HPN +   
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91

Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G      T  LV EY   GS  D L    +  PL       I       L +LHS   H+
Sbjct: 92  GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HN 145

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL      KL+DFG     S +  S  N+ +       GT  +M PE +
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFG-----SASIASPANSFV-------GTPYWMAPEVI 193

Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPAL 735
            +   G+   K DV+S GI  + L   +P L
Sbjct: 194 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 224

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 61.0 bits (148), Expect = 8e-10
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 11/104 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L+FLH    H +++ DLK  NILLDA    KL+DFG+ +   +  ++   TT 
Sbjct: 102 AAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCK---EGILNGVTTTT 155

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C     GT  Y+ PE L   E  P  D ++ G+++  ++ G+P
Sbjct: 156 FC-----GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQP 194

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 61.2 bits (148), Expect = 1e-09
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 29/209 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           IG G +G +   L+RH       A+K+L    +   S+   F +E DI++    P +V L
Sbjct: 51  IGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             A  +     +V EY+P G L + +S  D   P  W    R  T    V++ L +    
Sbjct: 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---RFYT--AEVVLALDAIHSM 161

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+KP N+LLD +   KL+DFG    +++  +   +T +       GT  Y+ PE 
Sbjct: 162 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-------GTPDYISPEV 214

Query: 707 LAS----GELTPKSDVYSFGIILLRLLTG 731
           L S    G    + D +S G+ L  +L G
Sbjct: 215 LKSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 22/205 (10%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G+GG+G +    ++      A K L    L   +G      E  IL K+    +V+L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 591 A--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A    +   LV   +  G L+  +      P       I  A ++   L  LH      I
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIY-NVGEPGFPEARAIFYAAQIICGLEHLHQ---RRI 116

Query: 649 VHGDLKPANILLDANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           V+ DLKP N+LLD +   ++SD G++       +I              GT  YM PE L
Sbjct: 117 VYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGR----------AGTPGYMAPEVL 166

Query: 708 ASGELTPKSDVYSFGIILLRLLTGR 732
                    D ++ G  L  ++ GR
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 22/225 (9%)

Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKG+         + VAIK+L  + S +   E   E  +++ +  P +  L
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C      LV + +P G L D +  ++N   +  Q  +    ++   + +L   +   
Sbjct: 75  LGICLTSTVQLVTQLMPYGCLLDYV--RENKDRIGSQDLLNWCVQIAKGMSYLEEVR--- 129

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +VH DL   N+L+ +    K++DFG++R L  +E   +          K    +M  E +
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH------ADGGKVPIKWMALESI 183

Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
                T +SDV+S+G+ +  L+T   +P  GI  +E+   L+ G+
Sbjct: 184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE 228

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 19/201 (9%)

Query: 536 IGEGGYGS--IYKGLLRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +GEG +G   + + +    + A+K +  P S     + ++E  +L+K++HPN+V    + 
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67

Query: 593 PEVWTL--VYEYLPNGSLEDRLSCKDNSPPL-SWQTRIRIATELCSVLIFLHSCKPHSIV 649
                L  V EY   G L  ++  K     L    T ++   ++C  +  +H  +   ++
Sbjct: 68  EADGHLYIVMEYCDGGDLMQKI--KLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VL 122

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+K  NI L  N   KL DFG +R L      ++     C     GT  Y+ PE   +
Sbjct: 123 HRDIKSKNIFLTQNGKVKLGDFGSARLL------TSPGAYACTY--VGTPYYVPPEIWEN 174

Query: 710 GELTPKSDVYSFGIILLRLLT 730
                KSD++S G IL  L T
Sbjct: 175 MPYNNKSDIWSLGCILYELCT 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 59.6 bits (144), Expect = 2e-09
 Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP-HSLQGPSEFQQEIDILSKIR-HPNLVTLVG- 590
           IG+G YG ++K L +    + A+K+L P H +    E + E +IL  +  HPN+V   G 
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID--EEIEAEYNILKALSDHPNVVKFYGM 83

Query: 591 -------ACPEVWTLVYEYLPNGSLEDRLSC-----KDNSPPLSWQTRIRIATELCSVLI 638
                     ++W LV E    GS+ D +       +    P+       IA  L   L+
Sbjct: 84  YYKKDVKNGDQLW-LVLELCNGGSVTDLVKGFLKRGERMEEPI-------IAYILHEALM 135

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L     +  +H D+K  NILL      KL DFG+S  L+   +  N +         GT
Sbjct: 136 GLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV--------GT 187

Query: 699 FAYMDPEFLASGE-----LTPKSDVYSFGIILLRLLTGRPALG 736
             +M PE +A  +        + DV+S GI  + L  G P L 
Sbjct: 188 PFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA 230

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 40/275 (14%)

Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G+G +GS+ +  L+       +VA+KML     S     EF +E   + +  HPN++ L
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66

Query: 589 VGACPE--------VWTLVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
           +G            +  ++  ++ +G L   L      +    L  QT +R   ++ S +
Sbjct: 67  IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L S    + +H DL   N +L+ N    ++DFG+S+ +   +        C    P  
Sbjct: 127 EYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQG---CASKLPVK 180

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEV-QYALDTGKLKNL 753
             A    E LA    T  SDV++FG+ +  ++T    P  G+   E+  Y +   +LK  
Sbjct: 181 WLAL---ESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP 237

Query: 754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 788
            D L         E +  L  +C     K RP   
Sbjct: 238 PDCL---------EDVYELMCQCWSPEPKCRPSFQ 263

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 59.4 bits (144), Expect = 2e-09
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 45/239 (18%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
           +F+    I  G YG++Y  L+RH     + A+K ++  +L   ++ QQ   E DIL+   
Sbjct: 2   DFETIKLISNGAYGAVY--LVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE 59

Query: 582 HPNLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
           +P +V++  +       C     +V EY+  G   D  +   N   L          E  
Sbjct: 60  NPFVVSMFCSFETKRHLC-----MVMEYVEGG---DCATLLKNIGALPVDMARMYFAETV 111

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             L +LH+   + IVH DLKP N+L+ +    KL+DFG    LS+  + S  T L     
Sbjct: 112 LALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFG----LSKIGLMSLTTNLYEGHI 164

Query: 695 PKGTFAYMD------PEFLA------SGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
            K T  ++D      PE++A       G   P  D ++ GIIL   L G  P  G T E
Sbjct: 165 EKDTREFLDKQVCGTPEYIAPEVILRQGYGKP-VDWWAMGIILYEFLVGCVPFFGDTPE 222

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 59.3 bits (143), Expect = 3e-09
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G + K  ++H    + +A K++H        ++  +E+ +L +   P
Sbjct: 6   DFERISELGAGNGGVVTK--VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP 63

Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    +   +++  +   L +L
Sbjct: 64  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKEAKRIPE---EILGKVSIAVLRGLAYL 119

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 120 R--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 167

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ L  GR
Sbjct: 168 YMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 58.9 bits (142), Expect = 4e-09
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 22/225 (9%)

Query: 536 IGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C      L+ + +P G L D +  +++   +  Q  +    ++   + +L       
Sbjct: 75  LGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEE---RR 129

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +VH DL   N+L+      K++DFG+++ L  +E   +          K    +M  E +
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYH------AEGGKVPIKWMALESI 183

Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
                T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 184 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 228

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 58.9 bits (143), Expect = 4e-09
 Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 57/250 (22%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--------MQVAIK--MLHPHSLQGPSEFQQEIDIL 577
            +F+    IG G +G +   L++         M+   K  ML    +   +  + E DIL
Sbjct: 1   DDFESIKVIGRGAFGEVR--LVQKKDTGHIYAMKKLRKSEMLEKEQV---AHVRAERDIL 55

Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSW-QTRIRIATELC 634
           ++  +P +V L  +        L+ EYLP G +   L  KD     +  +TR  IA    
Sbjct: 56  AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIA---- 108

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS------------RFLSQNEI 682
             ++ + S      +H D+KP N+LLDA    KLSDFG+             R LS    
Sbjct: 109 ETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALP 168

Query: 683 SSNNTTLCCRTDPK------------------GTFAYMDPE-FLASGELTPKSDVYSFGI 723
           S+    +      K                  GT  Y+ PE FL +G    + D +S G+
Sbjct: 169 SNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGV 227

Query: 724 ILLRLLTGRP 733
           I+  +L G P
Sbjct: 228 IMYEMLVGYP 237

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 60.2 bits (146), Expect = 4e-09
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 34/224 (15%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
            IG+GG G +Y   L +      +VA+K +     + P     F +E  I + + HP +V
Sbjct: 9   LIGKGGMGEVY---LAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIV 65

Query: 587 TLVGACPEVWTLVYE--YLPNGSLEDRL----SCKDNSPPLSWQTRI----RIATELCSV 636
            +   C +   + Y   Y+   +L+  L      +  S  L+ +T +     I  ++C+ 
Sbjct: 66  PVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT 125

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE-----ISSNNTTLCC 691
           + ++HS     ++H DLKP NILL       + D+G + F    E     I  +   +C 
Sbjct: 126 IEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICY 182

Query: 692 R--TDPK---GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
              T P    GT  YM PE L     +  +D+Y+ G+IL ++LT
Sbjct: 183 SSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 58.7 bits (142), Expect = 4e-09
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 38/220 (17%)

Query: 528 HNFDPSLKIGEGGYGSI----YKGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKI 580
            +F+    +G G +G +    +KG   +   AIK L    +    + Q   QE  IL ++
Sbjct: 18  SDFEMGETLGTGSFGRVRIAKHKGTGEYY--AIKCLKKREILKMKQVQHVAQEKSILMEL 75

Query: 581 RHPNLVTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
            HP +V ++ +  +   V+  + E++  G L   L      P         +A    + L
Sbjct: 76  SHPFIVNMMCSFQDENRVY-FLLEFVVGGELFTHLRKAGRFPN-------DVAKFYHAEL 127

Query: 638 I----FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           +    +LHS     I++ DLKP N+LLD     K++DFG ++     ++     TLC   
Sbjct: 128 VLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAK-----KVPDRTFTLC--- 176

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
              GT  Y+ PE + S       D ++ G++L   + G P
Sbjct: 177 ---GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYP 213

Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (141), Expect = 5e-09
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 36/234 (15%)

Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVG 590
           IG+G +G + +   R  Q   A+K +    +   SE      E  +L+++  P +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 591 A--CPEVWTLVYEYLPNGSLEDRLS---CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           +   PE   LV  ++  G L   L      D S     + R   A  LC+ L  LH    
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHLQREGRFDLS-----RARFYTAELLCA-LENLHK--- 111

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            ++++ DLKP NILLD      L DFG+ +   +++  +N  T C      GT  Y+ PE
Sbjct: 112 FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN--TFC------GTPEYLAPE 163

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL--KNLLDPL 757
            L     T   D ++ G++L  +LTG P         Y  +  ++  K L +PL
Sbjct: 164 LLLGHGYTKAVDWWTLGVLLYEMLTGLPPF-------YDENVNEMYRKILQEPL 210

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 58.5 bits (141), Expect = 5e-09
 Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 26/208 (12%)

Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQQEID-----ILSKIRHPNLVTL 588
           IG+G +G +   K  L     A+K+L    +    E Q+ I      +L  ++HP LV L
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKE-QKHIMAERNVLLKNVKHPFLVGL 61

Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    E    V +++  G L   L  ++ S P   + R R  A E+ S L +LHS   
Sbjct: 62  HYSFQTTEKLYFVLDFVNGGELFFHLQ-RERSFP---EPRARFYAAEIASALGYLHSIN- 116

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             IV+ DLKP NILLD+     L+DFG+ +       S   TT C      GT  Y+ PE
Sbjct: 117 --IVYRDLKPENILLDSQGHVVLTDFGLCK--EGIAQSDTTTTFC------GTPEYLAPE 166

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +         D +  G +L  +L G P
Sbjct: 167 VIRKQPYDNTVDWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 58.5 bits (141), Expect = 5e-09
 Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 28/209 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSK-IRHPNLVT 587
           IG+G +G +   L RH       A+K+L   ++    E      E ++L K ++HP LV 
Sbjct: 3   IGKGSFGKVL--LARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 588 LVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCK 644
           L  +      L  V +Y+  G L   L           + R R  A E+ S L +LHS  
Sbjct: 61  LHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLHSL- 115

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
             +IV+ DLKP NILLD+     L+DFG+ +     E +   +T C      GT  Y+ P
Sbjct: 116 --NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNGTTSTFC------GTPEYLAP 165

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L         D +  G +L  +L G P
Sbjct: 166 EVLHKQPYDRTVDWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 57.6 bits (139), Expect = 5e-09
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 14/150 (9%)

Query: 535 KIGEGGYGSIYKGL----LRHMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G +  G         QV +K L    S+Q   +F +E      ++H NL+  +
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 590 GACPEV--WTLVYEYLPNGSLEDRL-SCK--DNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           G C EV  + LV E+ P G L+  L SC+  +   P    T  R+A E+   L+ LH   
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTP-DPTTLQRMACEIALGLLHLHK-- 118

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGIS 674
            ++ +H DL   N LL A+   K+ D+G+S
Sbjct: 119 -NNFIHSDLALRNCLLTADLTVKIGDYGLS 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 58.3 bits (141), Expect = 7e-09
 Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGP---SEFQQEIDILSKIR 581
           +FD    +G G +G +   ++R        A+K++    L      S F++E DILS   
Sbjct: 2   DFDVKSLVGRGHFGEVQ--VVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN 59

Query: 582 HPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
            P +  L  A    +   LV EY P G L   L+  ++      +   +    L  +++ 
Sbjct: 60  SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED--QFD-EDMAQFY--LAELVLA 114

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           +HS      VH D+KP N+L+D     KL+DFG     S   +++N         P GT 
Sbjct: 115 IHSVHQMGYVHRDIKPENVLIDRTGHIKLADFG-----SAARLTANKMVNS--KLPVGTP 167

Query: 700 AYMDPEFLASGELTPKS------DVYSFGIILLRLLTGR 732
            Y+ PE L +     K       D +S G+I   ++ GR
Sbjct: 168 DYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 57.5 bits (139), Expect = 8e-09
 Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 529 NFDPSLKIGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           NF+    +G G YG ++          G L  M+V  K       +     + E  +L  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 580 IRH-PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           +R  P LVTL  A        L+ +Y+  G L   L  +++      + R+ IA E+   
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFT--ESEVRVYIA-EIVLA 117

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTDP 695
           L  LH      I++ D+K  NILLD+     L+DFG+S+ FL++ E  +   + C     
Sbjct: 118 LDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAY--SFC----- 167

Query: 696 KGTFAYMDPEFLASGELTPKS--DVYSFGIILLRLLTG 731
            GT  YM PE +  G        D +S G++   LLTG
Sbjct: 168 -GTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 57.2 bits (138), Expect = 9e-09
 Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 52/274 (18%)

Query: 536 IGEGGYGSIYKGL---------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +G+G +  I+KG+         L   +V +K+L          F +   ++S++ H +LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
              G C   +   +V EY+  GSL+  L    N   +SW  ++ +A +L   L FL    
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLED-- 118

Query: 645 PHSIVHGDLKPANILL----DANFVS----KLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              + HG++   N+LL    D    +    KLSD GIS  +   EI      L  R    
Sbjct: 119 -KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI------LLER---- 167

Query: 697 GTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTG--RP--ALGITKEVQYALDTGKLK 751
               ++ PE +     L+  +D +SFG  L  + +G  +P  AL   K++Q+  D  +L 
Sbjct: 168 --IPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLP 225

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                 A  W      +LANL  +C +     RP
Sbjct: 226 ------APKW-----TELANLINQCMDYEPDFRP 248

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 58.9 bits (143), Expect = 1e-08
 Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 19/165 (11%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIES--------IRRAKASESLYAEELK-- 409
            +L + + E E    E  ++    G+ E+  ++         I   + S +    EL+  
Sbjct: 261 SELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320

Query: 410 --RRKEFEEALANGKLE-------LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
             R  + E  +     E       +E  +K+ D++ EE     ++   L +++ E D+  
Sbjct: 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380

Query: 461 KELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
            E   ++    E L+  K+E +EL+ E D+  +E + L +   + 
Sbjct: 381 AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADL 425

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 58.3 bits (141), Expect = 1e-08
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           VL+ +H      ++H D+K ANILL +N + KL DFG S+  +         T C     
Sbjct: 152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC----- 206

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRP 733
            GT  Y+ PE       + K+D++S G++L  LLT  RP
Sbjct: 207 -GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP 244

Length = 496

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 56.9 bits (137), Expect = 2e-08
 Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 42/216 (19%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID-----ILSKIRHPNLV 586
           IG+G +G +   L +        A+K+L   ++    E Q  I      +L  ++HP LV
Sbjct: 3   IGKGSFGKVL--LAKRKSDGSFYAVKVLQKKTILKKKE-QNHIMAERNVLLKNLKHPFLV 59

Query: 587 TLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
            L  +    E    V +Y+  G L      E              + R R  A E+ S +
Sbjct: 60  GLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFL----------EPRARFYAAEVASAI 109

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LHS    +I++ DLKP NILLD+     L+DFG+ +     E     +T C      G
Sbjct: 110 GYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCK--EGVEPEETTSTFC------G 158

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T  Y+ PE L         D +  G +L  +L G P
Sbjct: 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP 194

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 57.0 bits (137), Expect = 2e-08
 Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 22/210 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNL 585
           +F+   ++G G  G ++K   +   + +A K++H        ++  +E+ +L +   P +
Sbjct: 6   DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 65

Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L  
Sbjct: 66  VGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLR- 120

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +YM
Sbjct: 121 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRSYM 169

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            PE L     + +SD++S G+ L+ +  GR
Sbjct: 170 SPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 57.8 bits (140), Expect = 2e-08
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
            +L +A  E E       EE     +A ++ +  +    A      EELKR  E  E   
Sbjct: 354 AELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEE-- 411

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
                LER+ ++ +++ EEL+    +   L++++ E ++  +ELE+++    + L+  ++
Sbjct: 412 ----RLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELER 467

Query: 480 EQDELQMERDKAVKEAEELRK 500
           E  ELQ E  +  KE   L  
Sbjct: 468 ELAELQEELQRLEKELSSLEA 488

Length = 1163

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 56.0 bits (135), Expect = 2e-08
 Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 32/247 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIK--MLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLV 589
           KIGEG YG +YK   ++    VA+K   L       P    +EI +L  +     +V L+
Sbjct: 8   KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67

Query: 590 --------GACPEVWTLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
                      P ++ LV+EYL +      D  + +    PL  +T      +L   +  
Sbjct: 68  DVEHVEEKNGKPSLY-LVFEYLDSDLKKFMDS-NGRGPGRPLPAKTIKSFMYQLLKGVAH 125

Query: 640 LHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            H    H ++H DLKP N+L+D    + K++D G+ R  S          +   T    T
Sbjct: 126 CHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS--------IPVKSYTHEIVT 174

Query: 699 FAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 757
             Y  PE  L S   +   D++S G I   +   +P      E+Q  L   KL  L  P 
Sbjct: 175 LWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKL--LGTPT 232

Query: 758 AGDWPFV 764
              WP V
Sbjct: 233 EQVWPGV 239

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 27/217 (12%)

Query: 529 NFDPSLKIGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           NF+    +G G YG ++          G L  M+V  K       +     + E  +L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 580 IRH-PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           IR  P LVTL  A        L+ +Y+  G L   LS ++       Q       E+   
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYS---GEIVLA 117

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LH      I++ D+K  NILLD+N    L+DFG+S+   ++E+     + C      
Sbjct: 118 LEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV-ERAYSFC------ 167

Query: 697 GTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLTG 731
           GT  YM P+ +  G+       D +S G+++  LLTG
Sbjct: 168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 56.1 bits (135), Expect = 3e-08
 Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 32/246 (13%)

Query: 496 EELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-- 553
           + L+  +K+ S S+  P+  +   + +      NF  +L  G G +G +     ++    
Sbjct: 5   KNLQLHKKKDSDSTKEPKRKNKMKYEDF-----NFIRTL--GTGSFGRVILATYKNEDFP 57

Query: 554 -VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGS 607
            VAIK      +    +      E  IL+ I HP  V L G+  +     LV E++  G 
Sbjct: 58  PVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGE 117

Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
               L      P          A ++  +  +L S    +IV+ DLKP N+LLD +   K
Sbjct: 118 FFTFLRRNKRFPN---DVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIK 171

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      + +   TLC      GT  Y+ PE L +      +D ++ GI +  
Sbjct: 172 MTDFGFAKV-----VDTRTYTLC------GTPEYIAPEILLNVGHGKAADWWTLGIFIYE 220

Query: 728 LLTGRP 733
           +L G P
Sbjct: 221 ILVGCP 226

Length = 340

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 56.1 bits (135), Expect = 3e-08
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 30/218 (13%)

Query: 529 NFDPSLKIGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           NF+    +G G YG ++          G L  M+V  K       +     + E ++L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 580 IRH-PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCS 635
           +R  P LVTL  A        L+ +Y+  G +   L  +DN      +  +R  + E+  
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFS----EDEVRFYSGEIIL 116

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTD 694
            L  LH      IV+ D+K  NILLD+     L+DFG+S+ FLS+ +      + C    
Sbjct: 117 ALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK--ERTYSFC---- 167

Query: 695 PKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
             GT  YM PE +       K+ D +S GI++  LLTG
Sbjct: 168 --GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 31/165 (18%)

Query: 578 SKIRHPNLVTLVGACPEVWTLVY---EYLPNGSL-----EDRLSCKDNSPPLSWQTRIRI 629
           +  RHP LV L  AC +    V    EY   G L      D  S          + R   
Sbjct: 57  NSERHPFLVNLF-ACFQTEDHVCFVMEYAAGGDLMMHIHTDVFS----------EPRAVF 105

Query: 630 -ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
            A  +   L +LH    + IV+ DLK  N+LLD     K++DFG+ +           +T
Sbjct: 106 YAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCK--EGMGFGDRTST 160

Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C      GT  ++ PE L     T   D +  G+++  +L G  
Sbjct: 161 FC------GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES 199

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 17/145 (11%)

Query: 598 LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
            V EYL  G L   + SC     P +       A E+   L FLHS     IV+ DLK  
Sbjct: 73  FVMEYLNGGDLMFHIQSCHKFDLPRA----TFYAAEIICGLQFLHS---KGIVYRDLKLD 125

Query: 657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           NILLD +   K++DFG+ +   +N +    T   C     GT  Y+ PE L   +     
Sbjct: 126 NILLDTDGHIKIADFGMCK---ENMLGDAKTCTFC-----GTPDYIAPEILLGQKYNTSV 177

Query: 717 DVYSFGIILLRLLTGR-PALGITKE 740
           D +SFG++L  +L G+ P  G  +E
Sbjct: 178 DWWSFGVLLYEMLIGQSPFHGHDEE 202

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 55.3 bits (133), Expect = 4e-08
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 28/207 (13%)

Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGPSEFQQ-----EIDILSKIRHPNL 585
           +G G +G + +G L     R + VAI  L      G S+ Q+     E   L +  H N+
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLR----AGCSDKQRRGFLAEALTLGQFDHSNI 68

Query: 586 VTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V L G      T+  V EY+ NG+L+  L  + +   L     + +   L S + +L   
Sbjct: 69  VRLEGVITRGNTMMIVTEYMSNGALDSFL--RKHEGQLVAGQLMGMLPGLASGMKYLSEM 126

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                VH  L    +L++++ V K+S F   R L +++  +  TT+      K    +  
Sbjct: 127 ---GYVHKGLAAHKVLVNSDLVCKISGF---RRLQEDKSEAIYTTM----SGKSPVLWAA 176

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT 730
           PE +     +  SDV+SFGI++  +++
Sbjct: 177 PEAIQYHHFSSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 55.2 bits (133), Expect = 5e-08
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 22/165 (13%)

Query: 573 EIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRI 629
           E  +L   RHP L  L  +      L  V EY   G L   LS  +  S     + R   
Sbjct: 45  ESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED---RARFYG 101

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT-- 687
           A E+ S L +LHSC    +V+ DLK  N++LD +   K++DFG    L +  IS   T  
Sbjct: 102 A-EIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFG----LCKEGISDGATMK 153

Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           T C      GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 154 TFC------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 56.6 bits (137), Expect = 6e-08
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)

Query: 356 DNLYDQLAQAMAEAE--NSRREAFEEALRRGKAEKD-----------AIESIRRAKAS-E 401
           + L  +LA    E E   SR E  EE L   + E +            +ES+  A A  +
Sbjct: 719 EELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLK 778

Query: 402 SLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAK 461
               E  ++R+  +E L   + ELE  +++ D +  EL+    ++  LE +I E ++  +
Sbjct: 779 EEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIE 838

Query: 462 ELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
           ELE+K+    E L+  +KE +EL+ E ++   E EEL    KE 
Sbjct: 839 ELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKEL 882

Length = 1163

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (132), Expect = 7e-08
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 17/111 (15%)

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
           + +  IA EL   L  LH    + IV+ DLKP NILLDA     L DFG    LS+  ++
Sbjct: 97  RAKFYIA-ELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFG----LSKANLT 148

Query: 684 SNNT--TLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTG 731
            N T  T C      GT  Y+ PE L   +  T   D +S G+++  +  G
Sbjct: 149 DNKTTNTFC------GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG 193

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 54.4 bits (131), Expect = 1e-07
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 37/211 (17%)

Query: 536 IGEGGYGSI--YKGLLRHMQVAIK-MLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--V 589
           +G G +G +   +  L    VAIK ++ P S    ++   +E+ +L  +RH N+++L  +
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77

Query: 590 GACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P E    V E L  G+   RL     S PL  Q       ++   L ++HS     +
Sbjct: 78  FISPLEDIYFVTELL--GTDLHRLL---TSRPLEKQFIQYFLYQILRGLKYVHSA---GV 129

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK-----GTFAYMD 703
           VH DLKP+NIL++ N   K+ DFG++R                  DP+      T  Y  
Sbjct: 130 VHRDLKPSNILINENCDLKICDFGLARI----------------QDPQMTGYVSTRYYRA 173

Query: 704 PE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE  L   +   + D++S G I   +L G+P
Sbjct: 174 PEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP 204

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLH      I++ DLK  N+LLD +   K++DFG+ +   +N       + 
Sbjct: 102 AAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCK---ENMNGEGKAST 155

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            C     GT  Y+ PE L   +     D +SFG++L  +L G+
Sbjct: 156 FC-----GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 54.7 bits (131), Expect = 1e-07
 Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 30/212 (14%)

Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----V 589
           IG G +G +Y+ +      +VAIK +    LQ P    +E+ I+  + H N++ L     
Sbjct: 74  IGNGSFGVVYEAICIDTSEKVAIKKV----LQDPQYKNRELLIMKNLNHINIIFLKDYYY 129

Query: 590 GACPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             C +         +V E++P    +       N+  L        + +LC  L ++HS 
Sbjct: 130 TECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS- 188

Query: 644 KPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H DLKP N+L+D N    KL DFG ++ L   + S   + +C R        Y 
Sbjct: 189 --KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV--SYICSRF-------YR 237

Query: 703 DPEF-LASGELTPKSDVYSFGIILLRLLTGRP 733
            PE  L +   T   D++S G I+  ++ G P
Sbjct: 238 APELMLGATNYTTHIDLWSLGCIIAEMILGYP 269

Length = 440

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 53.9 bits (130), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L ++HS    +++H DLKP+N+LL+AN   K+ DFG++R        + +      T+  
Sbjct: 121 LKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR--------TTSEKGDFMTEYV 169

Query: 697 GTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            T  Y  PE  L   E T   DV+S G I   LL  +P
Sbjct: 170 VTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 32/226 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           K+G G YG +YK   +  +     A+K +    +   +   +EI +L +++HPN+++L  
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQK 65

Query: 589 ---VGACPEVWTLVYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                A  +VW L+++Y  +     ++   + K N  P+    R  + + L  +L  +H 
Sbjct: 66  VFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQL-PRGMVKSLLYQILDGIHY 123

Query: 643 CKPHSIVHGDLKPANILLDANFVS----KLSDFGISRFLSQNEISSNNTTL--CCRTDP- 695
              + ++H DLKPANIL+          K++D G +R          N+ L      DP 
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF--------NSPLKPLADLDPV 175

Query: 696 KGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGRPALGITKE 740
             TF Y  PE L       K+ D+++ G I   LLT  P     +E
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 221

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 32/226 (14%)

Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           K+G G YG +YK   +      + A+K +    +   +   +EI +L +++HPN++ L  
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSA--CREIALLRELKHPNVIALQK 65

Query: 589 ---VGACPEVWTLVYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                +  +VW L+++Y  +     ++   + K N  P+    R  + + L  +L  +H 
Sbjct: 66  VFLSHSDRKVW-LLFDYAEHDLWHIIKFHRASKANKKPMQL-PRSMVKSLLYQILDGIHY 123

Query: 643 CKPHSIVHGDLKPANILLDANFVS----KLSDFGISRFLSQNEISSNNTTL--CCRTDP- 695
              + ++H DLKPANIL+          K++D G +R          N+ L      DP 
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF--------NSPLKPLADLDPV 175

Query: 696 KGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGRPALGITKE 740
             TF Y  PE L       K+ D+++ G I   LLT  P     +E
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 221

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLHS     I++ DLK  N++LD +   K++DFG+ +   +N    N  + 
Sbjct: 102 AAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCK---ENVFGDNRAST 155

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            C     GT  Y+ PE L   + T   D +SFG++L  +L G+
Sbjct: 156 FC-----GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+ S L+FLH      I++ DLK  N+LLD     KL+DFG+ +    N  ++  +T 
Sbjct: 102 AAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT--STF 156

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           C      GT  Y+ PE L      P  D ++ G++L  +L G
Sbjct: 157 C------GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 38/232 (16%)

Query: 536 IGEGGYGSIY------KGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKIRH--- 582
           IG GG+G +Y       G +  M+      IKM      QG +    E  +LS +     
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-----QGETLALNERIMLSLVSTGDC 56

Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           P +V +  A   P+  + + + +  G L   LS        S       A E+   L  +
Sbjct: 57  PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHM 113

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H+     +V+ DLKPANILLD +   ++SD G++   S+ +  ++           GT  
Sbjct: 114 HN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----------VGTHG 160

Query: 701 YMDPEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKL 750
           YM PE L  G     S D +S G +L +LL G  P      + ++ +D   L
Sbjct: 161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 212

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 52.6 bits (126), Expect = 3e-07
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 22/209 (10%)

Query: 535 KIGEGGYG-----SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G      IY        V  ++    S +  +EF Q+ D    ++HPN++  +
Sbjct: 2   EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61

Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C E   + LV+EY   G L+  LS +     NS  L  Q   R+A E+ + +  +H  
Sbjct: 62  GQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ---RMACEIAAGVTHMHK- 117

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGI--SRFLSQNEISSNNTTLCCR-TDPKGTFA 700
             H+ +H DL   N  L ++   K+ D+GI  SR+      + ++  +  R   P+    
Sbjct: 118 --HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGE 175

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLL 729
           +     L + E T  S+V++ G+ L  L 
Sbjct: 176 FHGG--LITAEQTKPSNVWALGVTLWELF 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 52.9 bits (127), Expect = 4e-07
 Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 75/239 (31%)

Query: 536 IGEGGYGSIYKGLLRH--MQVAIK---MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G G  G ++  +      +VA+K   +  P S++      +EI I+ ++ H N+V    
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVK---HALREIKIIRRLDHDNIVK--- 66

Query: 591 ACPEVWTLVYEYL-PNGSLEDRLSCKDNSPPLSWQTRIRIA--------TELCSV----- 636
                   VYE L P+GS        D +  +   T +           T+L +V     
Sbjct: 67  --------VYEVLGPSGS--------DLTEDVGSLTELNSVYIVQEYMETDLANVLEQGP 110

Query: 637 ----------------LIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFL-- 677
                           L ++HS    +++H DLKPAN+ ++  + V K+ DFG++R +  
Sbjct: 111 LSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDP 167

Query: 678 --SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRP 733
             S     S             T  Y  P  L S    T   D+++ G I   +LTG+P
Sbjct: 168 HYSHKGYLSEGLV---------TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKP 217

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 52.8 bits (127), Expect = 4e-07
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 49/225 (21%)

Query: 535 KIGEGGYGSI----YKGLLRHMQVAIK---------MLHPHSLQGPSEFQQEIDILSKIR 581
           ++G+G YG +             VAIK         +L   +L+       E+ +L   R
Sbjct: 7   ELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALR-------ELKLLRHFR 59

Query: 582 -HPNLVTLV-------GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLS---WQTRI-RI 629
            H N+  L        G   E++  +YE L    L   +    +  PL+   +Q+ I +I
Sbjct: 60  GHKNITCLYDMDIVFPGNFNELY--LYEELMEADLHQIIR---SGQPLTDAHFQSFIYQI 114

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
              LC  L ++HS    +++H DLKP N+L++A+   K+ DFG++R  S+N   +     
Sbjct: 115 ---LCG-LKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFM- 166

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGRP 733
              T+   T  Y  PE + S +   K+ DV+S G IL  LL  +P
Sbjct: 167 ---TEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKP 208

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 31/209 (14%)

Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +G +   L+R        A+K+L    +    E      E  +L   RHP L  L
Sbjct: 3   LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             A    +    V EY   G L   LS       +  + R R    E+ S L +LHS   
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHS--- 113

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
             +V+ D+K  N++LD +   K++DFG    L +  IS   T  T C      GT  Y+ 
Sbjct: 114 RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFC------GTPEYLA 163

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 52.5 bits (126), Expect = 5e-07
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 11/104 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLHS     I++ DLK  N++LDA    K++DFG+ +   +N      T  
Sbjct: 107 AAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCK---ENIFGGKTTRT 160

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C     GT  Y+ PE +A        D ++FG++L  +L G+P
Sbjct: 161 FC-----GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 199

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 53.2 bits (128), Expect = 6e-07
 Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 5/148 (3%)

Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIE-SIRRAK----ASESLYAEELKRRKEFEEA 417
            +          E  EE  +  + E + +E  +  A+    A E       +RR+  E+ 
Sbjct: 770 LEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQE 829

Query: 418 LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
           +   + E+E ++++ DE+ EEL+    +   L+ ++ E +   +ELE ++    E  +  
Sbjct: 830 IEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEEL 889

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEA 505
           ++E  EL+ E  +  +E E+LR+  +E 
Sbjct: 890 EEELRELESELAELKEEIEKLRERLEEL 917

Length = 1163

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 52.0 bits (124), Expect = 6e-07
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 31/209 (14%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +G +   L+R        A+K+L    +    E      E  +L   RHP L +L
Sbjct: 3   LGKGTFGKVI--LVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY+  G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHSGK- 115

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
             IV+ DLK  N++LD +   K++DFG    L +  I+   T  T C      GT  Y+ 
Sbjct: 116 --IVYRDLKLENLMLDKDGHIKITDFG----LCKEGITDAATMKTFC------GTPEYLA 163

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 51.9 bits (124), Expect = 6e-07
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 24/208 (11%)

Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    ++H +   A+K+L+   +   +E   F++E ++L       + TL  
Sbjct: 9   IGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHY 68

Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A  +     LV +Y   G L   LS  ++  P     R  IA     +++ +HS      
Sbjct: 69  AFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPED-MARFYIA----EMVLAIHSIHQLHY 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH D+KP N+LLD N   +L+DFG    ++Q+    ++  +       GT  Y+ PE L 
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAV-------GTPDYISPEILQ 176

Query: 709 S-----GELTPKSDVYSFGIILLRLLTG 731
           +     G+  P+ D +S G+ +  +L G
Sbjct: 177 AMEDGMGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 52.2 bits (125), Expect = 6e-07
 Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 33/174 (18%)

Query: 573 EIDILSKIRHPNLVTLVGACPEVW-TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           EIDIL  I H  ++ L+ A    W + V   +P     D  +  D S PL  +  I I  
Sbjct: 136 EIDILKTISHRAIINLIHAYR--WKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQR 192

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
            L   L +LH      I+H D+K  NI LD    + L DFG +                C
Sbjct: 193 RLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAA----------------C 233

Query: 692 RTD-----PK-----GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           + D     P+     GT     PE LA      K+D++S G++L  +      L
Sbjct: 234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 52.8 bits (127), Expect = 8e-07
 Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
           ++L + + E E       E   +  K E + +E  R+A   E    EE     E E  L 
Sbjct: 754 EELQERLEELEEELESLEEALAKL-KEEIEELEEKRQALQEELEELEEELE--EAERRLD 810

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
             + ELE ++++ + + +E++   ++   LE ++ E ++  +ELE+++    E L+  + 
Sbjct: 811 ALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEA 870

Query: 480 EQDEL-------QMERDKAVKEAEELRKSRKEASS 507
           E++EL       + E+++  +E  EL     E   
Sbjct: 871 EKEELEDELKELEEEKEELEEELRELESELAELKE 905

Length = 1163

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 9e-07
 Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 38/236 (16%)

Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV-----AIKMLHPHSLQGPSEFQQ---EIDILSK 579
            +F     +G+G  G ++   L  ++      A+K+L    +   ++ ++   E +IL+ 
Sbjct: 1   KHFKKIKLLGKGDVGRVF---LVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT 57

Query: 580 IRHPNLVTLVG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HP L TL           LV +Y P G L   L  +     LS +     A E+   L
Sbjct: 58  LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQ-RQPGKCLSEEVARFYAAEVLLAL 116

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS----------------QNE 681
            +LH      IV+ DLKP NILL  +    LSDF +S+                    + 
Sbjct: 117 EYLH-LL--GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSV 173

Query: 682 ISSNNTTLCCRTDPK-----GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            S  + T       +     GT  Y+ PE ++        D ++ GI+L  +L G 
Sbjct: 174 NSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 52.4 bits (126), Expect = 1e-06
 Identities = 33/148 (22%), Positives = 68/148 (45%)

Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEA 417
           L ++L     E  +      E   +  + E+   E  R   A E    +   R +E EE 
Sbjct: 686 LEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEE 745

Query: 418 LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
           L   + ELE ++++ +E+ EEL+   +  + L+ +I E ++  + L++++    E L+  
Sbjct: 746 LEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEA 805

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEA 505
           ++  D L+ E +   +  E L +  +E 
Sbjct: 806 ERRLDALERELESLEQRRERLEQEIEEL 833

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 52.0 bits (125), Expect = 1e-06
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 371 NSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELK-RRKEFEEALANGKLELERMK 429
               E  EE L R + E + ++     +A + +  EELK   +E  E L   + EL  +K
Sbjct: 238 RKELEELEEELSRLEEELEELQE-ELEEAEKEI--EELKSELEELREELEELQEELLELK 294

Query: 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489
           ++ +E+  E+ +  ++   LE+++ E ++  +EL++KI +  E L+  +   +EL+    
Sbjct: 295 EEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLA 354

Query: 490 ---KAVKEAEELRKSRKEA 505
              +A +E EE   +  E 
Sbjct: 355 ELEEAKEELEEKLSALLEE 373

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 52.0 bits (125), Expect = 1e-06
 Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 8/167 (4%)

Query: 339 KEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAK 398
           +E+L+S   ++     +    ++  QA+ E      E  EEA RR  A +  +ES+ + +
Sbjct: 764 EEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRR 823

Query: 399 ASESLYAEELK-RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESD 457
                  EEL+   +E EE L   + ELE ++K+ +E+ EEL+    +K  LE ++    
Sbjct: 824 ERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDEL---- 879

Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
              KELE++     E L+  + E  EL+ E +K  +  EEL    + 
Sbjct: 880 ---KELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLER 923

Length = 1163

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 51.9 bits (124), Expect = 1e-06
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 19/140 (13%)

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +++ L       ++H DLK ANI L    + KL DFG S+  S +      ++ C     
Sbjct: 178 IVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFC----- 232

Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG-----ITKEVQYA-LD-- 746
            GT  Y+ PE       + K+D++S G+IL  LLT  RP  G     I ++V Y   D  
Sbjct: 233 -GTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF 291

Query: 747 ----TGKLKNLLDPLAGDWP 762
               +  +K LLDPL    P
Sbjct: 292 PCPVSSGMKALLDPLLSKNP 311

Length = 478

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 51.2 bits (122), Expect = 1e-06
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)

Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKPHSIVHGDLKPA 656
           LV EY+  G L   +  +   P    +   R  A E+C  L FLH      I++ DLK  
Sbjct: 73  LVIEYVNGGDLMFHMQRQRKLP----EEHARFYAAEICIALNFLHE---RGIIYRDLKLD 125

Query: 657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           N+LLDA+   KL+D+G+ +   +     + T+  C     GT  Y+ PE L   E     
Sbjct: 126 NVLLDADGHIKLTDYGMCK---EGLGPGDTTSTFC-----GTPNYIAPEILRGEEYGFSV 177

Query: 717 DVYSFGIILLRLLTGRPALGI 737
           D ++ G+++  ++ GR    I
Sbjct: 178 DWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 50.7 bits (121), Expect = 1e-06
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVG 590
           +G+GG+G +    +R      A K L    ++   G S    E  IL K+    +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAY 67

Query: 591 A--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A    +   LV   +  G L+  +    N P    +  +  A E+   L  LH     + 
Sbjct: 68  AYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHR---ENT 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           V+ DLKP NILLD     ++SD G++  + + E               GT  YM PE L 
Sbjct: 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV---------GTVGYMAPEVLN 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKE 740
           +   T   D +  G ++  ++ G+      KE
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 51.3 bits (123), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L +LHS     I+H D+KP N+L+++N V K+ DFG++R    +E           T   
Sbjct: 116 LKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE-------SKHMTQEV 165

Query: 697 GTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGR 732
            T  Y  PE L  S   T   D++S G I   LL  R
Sbjct: 166 VTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 11/104 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLHS     I++ DLK  N++LD+    K++DFG+ +   +N      T  
Sbjct: 107 AAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENMWDGVTTKT 160

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C     GT  Y+ PE +A        D ++FG++L  +L G+ 
Sbjct: 161 FC-----GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 51.3 bits (123), Expect = 2e-06
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 4/142 (2%)

Query: 363 AQAMAEAENSRRE--AFEEAL--RRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
            Q     E+      A EE L   +   E    +     +       E L   +E +E L
Sbjct: 192 GQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKERL 251

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
              K  L  ++    E ++  +  L +   L  ++ E  +  +ELE++I    E L+  +
Sbjct: 252 EELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLR 311

Query: 479 KEQDELQMERDKAVKEAEELRK 500
              +EL+   +K     E L K
Sbjct: 312 ALLEELEELLEKLKSLEERLEK 333

Length = 908

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 60/225 (26%)

Query: 536 IGEGGYGSIYKGLLRH--MQVAIK-MLHPHSLQGPSEFQQEID---------ILSKIRHP 583
           +G G YG +          +VAIK +  P        FQ  I          +L  + H 
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRP--------FQSAIHAKRTYRELRLLKHMDHE 74

Query: 584 NLVTLVGACPEVWTLVYEYLPNGSLED-------------RLSCKDNSPPLSWQTRIR-I 629
           N++ L+    +V+T      P  SLED              L+       LS    I+ +
Sbjct: 75  NVIGLL----DVFT------PASSLEDFQDVYLVTHLMGADLNNIVKCQKLS-DDHIQFL 123

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
             ++   L ++HS     I+H DLKP+NI ++ +   K+ DFG++R              
Sbjct: 124 VYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE--------- 171

Query: 690 CCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
              T    T  Y  PE  L         D++S G I+  LLTG+ 
Sbjct: 172 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT 214

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 20/212 (9%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVG 590
           +G+GG+G +    +R      A K L    ++   G +    E  IL K+    +V+L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAY 67

Query: 591 A--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A    +   LV   +  G L+  +    N P    Q  I  A ELC  L  L       I
Sbjct: 68  AYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQR---ERI 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           V+ DLKP NILLD     ++SD G++  + + E               GT  YM PE + 
Sbjct: 124 VYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV---------GTVGYMAPEVIN 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKE 740
           + + T   D +  G ++  ++ G+      KE
Sbjct: 175 NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 29/208 (13%)

Query: 536 IGEGGYGSIY---KGLLRHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRH---PNLV 586
           IG GG+G +Y   K     M  A+K L    +   QG +    E  +LS +     P +V
Sbjct: 2   IGRGGFGEVYGCRKADTGKM-YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            +  A   P+    + + +  G L   LS        S +     ATE+   L  +H+  
Sbjct: 61  CMTYAFHTPDKLCFILDLMNGGDLHYHLS---QHGVFSEKEMRFYATEIILGLEHMHN-- 115

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              +V+ DLKPANILLD +   ++SD G++   S+ +  ++           GT  YM P
Sbjct: 116 -RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----------VGTHGYMAP 164

Query: 705 EFLASGELTPKS-DVYSFGIILLRLLTG 731
           E L  G     S D +S G +L +LL G
Sbjct: 165 EVLQKGTAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 50.5 bits (121), Expect = 4e-06
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF-EEALA 419
           +L +   E      +  E+     K+ K+ + S+           EEL+R+ E  +  LA
Sbjct: 668 ELKELEEELAELEAQ-LEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
             + ELE+++ + +E+ EEL+   ++   L+ ++        ELE+++ S  E L   K+
Sbjct: 727 ALEEELEQLQSRLEELEEELEELEEELEELQERLE-------ELEEELESLEEALAKLKE 779

Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
           E +EL+ +R    +E EEL +  +EA
Sbjct: 780 EIEELEEKRQALQEELEELEEELEEA 805

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 50.5 bits (121), Expect = 4e-06
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 25/173 (14%)

Query: 361 QLAQAMAEAENSRR------EAFEEALRRGKAEKDAIESIRR--AKASESLYAEELK--- 409
           +L +   E            E  EEA +  +  K  +E +R    +  E L   + +   
Sbjct: 240 ELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLELKEEIEE 299

Query: 410 ----------RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQT 459
                     R +E E  L   +  LE +K++ + + EEL+        LE  +AE ++ 
Sbjct: 300 LEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEA 359

Query: 460 AKELEQK----IISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSS 508
            +ELE+K    +    EL +  ++E  EL+ E  +   E EEL++  +     
Sbjct: 360 KEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEER 412

Length = 1163

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 16/112 (14%)

Query: 570 FQQEIDILSKIRH-----PNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQ 624
            ++E+ IL  +       P ++    +    + L+ E++   +L+           +S +
Sbjct: 38  REREVAILQLLARKGLPVPKVLASGESDGWSY-LLMEWIEGETLD----------EVSEE 86

Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 676
            +  IA +L  +L  LH      + HGDL P NIL+D   +  + D+  + +
Sbjct: 87  EKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 49.6 bits (119), Expect = 4e-06
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 27/220 (12%)

Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP 583
            + P   IG G YG +   +      +VAIK + PH+   P+  ++   E+ IL   +H 
Sbjct: 6   RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKI-PHAFDVPTLAKRTLRELKILRHFKHD 64

Query: 584 NLVTL-------VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           N++ +            +V+ +V + L    L   +       PL+ +       +L   
Sbjct: 65  NIIAIRDILRPPGADFKDVY-VVMD-LMESDLHHIIHSDQ---PLTEEHIRYFLYQLLRG 119

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L ++HS     ++H DLKP+N+L++ +   ++ DFG++R LS +            T+  
Sbjct: 120 LKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFM----TEYV 172

Query: 697 GTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPAL 735
            T  Y  PE L S  E T   D++S G I   +L GR  L
Sbjct: 173 ATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML-GRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 49.3 bits (117), Expect = 5e-06
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)

Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    L++     A+K+L+   +   +E   F++E D+L    +  + TL  
Sbjct: 9   IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHY 68

Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A  +     LV +Y   G L   LS  ++  P     R  +A     ++I + S      
Sbjct: 69  AFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPED-MARFYLA----EMVIAIDSVHQLHY 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH D+KP NIL+D N   +L+DFG    L ++    ++  +       GT  Y+ PE L 
Sbjct: 124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-------GTPDYISPEILQ 176

Query: 709 S-----GELTPKSDVYSFGIILLRLLTG 731
           +     G+  P+ D +S G+ +  +L G
Sbjct: 177 AMEDGKGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 50.1 bits (120), Expect = 6e-06
 Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 11/155 (7%)

Query: 361 QLAQAMAEAEN--SRREAFEEALRRGKAEKDAIESIRRAKASE-----SLYAEELKRRKE 413
           +LA+  AE +   +  E  E  +   +  +D +         E     +   E  K   E
Sbjct: 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAE 382

Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKI---ISA 470
             + L + + +LE++K++ +E+  EL    ++   L  ++A+ +     +E KI      
Sbjct: 383 TRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEE 442

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
            E     + ++ E ++E+  A     E      + 
Sbjct: 443 KEDKA-LEIKKQEWKLEQLAADLSKYEQELYDLKE 476

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]

 Score = 48.1 bits (115), Expect = 7e-06
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 373 RREAFEEALRRGKAEKDAI----ESIRRAKAS--------ESLYAEELKRRKEFEEALAN 420
           R +   +AL++ KAE +A+    E++              ES   E  +R K  EE L+ 
Sbjct: 25  RIKEIRKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQEIRERIKRAEEKLSA 84

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            K E E           E+QIA ++ + LE ++AE  +  ++LE++I    E L+  +K 
Sbjct: 85  VKDERELRALNI-----EIQIAKERINSLEDELAELMEEIEKLEKEIEDLKERLERLEKN 139

Query: 481 QDELQMERDKAVKEAEELRK--SRKEASSSSHMPQ 513
             E +   ++ V E  E  +  S K       +  
Sbjct: 140 LAEAEARLEEEVAEIREEGQELSSKREELKEKLDP 174

Length = 239

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 48.7 bits (116), Expect = 7e-06
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 20/160 (12%)

Query: 582 HPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C         V E++  G L   +  +   P    +   R  + E+   L
Sbjct: 55  HPFLVGL-HSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 109

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            FLH      I++ DLK  N+LLDA    KL+D+G+ +   +     + T+  C     G
Sbjct: 110 NFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCK---EGIRPGDTTSTFC-----G 158

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 737
           T  Y+ PE L   +     D ++ G+++  ++ GR    I
Sbjct: 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 48.3 bits (115), Expect = 9e-06
 Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 20/212 (9%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVG 590
           +G+GG+G +    +R      A K L    ++   G +    E  IL K+    +V+L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 67

Query: 591 A--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A    +   LV   +  G L+  +    N P    +  +  A E+   L  LH      I
Sbjct: 68  AYETKDALCLVLTLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHR---ERI 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           V+ DLKP NILLD     ++SD G++  + + E               GT  YM PE + 
Sbjct: 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRV---------GTVGYMAPEVVK 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKE 740
           +   T   D +  G ++  ++ G+      KE
Sbjct: 175 NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 48.9 bits (117), Expect = 1e-05
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 8/149 (5%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           +L + + E E       E         ++  E +   K       EEL+ R+   E    
Sbjct: 292 ELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLE---- 347

Query: 421 GKLELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
              ELE++  + +E  EEL+  L      LE       +   ELE ++      L+  K+
Sbjct: 348 ---ELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKR 404

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSS 508
           E + L+   ++  +  E+L++  KE  + 
Sbjct: 405 EIESLEERLERLSERLEDLKEELKELEAE 433

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 48.9 bits (117), Expect = 1e-05
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRR----AKASESLYAEELKRRK 412
            L ++LA+  A+ E    E  +      ++ +D +E +RR     +        EL   +
Sbjct: 671 ELEEELAELEAQLE-KLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALE 729

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
           E  E L +   ELE   ++ +E +EELQ  L++   LE ++   ++   +L+++I    E
Sbjct: 730 EELEQLQSRLEELEEELEELEEELEELQERLEE---LEEELESLEEALAKLKEEIEELEE 786

Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRK 503
             Q  ++E +EL+ E ++A +  + L +  +
Sbjct: 787 KRQALQEELEELEEELEEAERRLDALERELE 817

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 48.9 bits (117), Expect = 1e-05
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 368 EAENSRREAFEEALRRGKAEKDAI---ESIRRAKASESLYAEELKRRKEF---EEALANG 421
           + E   RE   E L +  AE +        + +   E L       R+E    E  LA  
Sbjct: 336 KEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEI 395

Query: 422 KLELERMKKQHDEV-------MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
           + ELE +K++ + +        E L+   ++   LE+++ E     +EL +++    E L
Sbjct: 396 RNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQL 455

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
           +  +    EL+ E  +     EEL++  KE SS
Sbjct: 456 EELRDRLKELERELAEL---QEELQRLEKELSS 485

Length = 1163

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 49.0 bits (117), Expect = 1e-05
 Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 8/156 (5%)

Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
           +L  +  +   E         EE   + +  ++    I   +         L+  +E  E
Sbjct: 263 SLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLRALLEELEELLE 322

Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQK----SLLESQIAESDQTAKELEQKIISAVE 472
            L + +  LE+++++ +++  EL+   ++K     LLE ++ E ++  +ELE+++  A+E
Sbjct: 323 KLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALE 382

Query: 473 LLQNYKKEQDEL---QMERDKAVKEA-EELRKSRKE 504
            L+  ++   EL     E   A++E  EEL +  KE
Sbjct: 383 RLKQLEEAIQELKEELAELSAALEEIQEELEELEKE 418

Length = 908

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 48.6 bits (116), Expect = 1e-05
 Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 27/205 (13%)

Query: 340 EDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESI----- 394
           ED       +L+         +  + + E     ++  +E   R    ++ ++S+     
Sbjct: 565 EDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKELEERLSQLEELLQSLELSEA 624

Query: 395 -RRAKASESLYAEELKRRKE---FEEALANGKLELERMKKQ-HDEVMEELQIALDQKSLL 449
               + +E     EL++       EE L     ELE   ++   E+  ELQ   +++ L 
Sbjct: 625 ENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVEELEAEIRRELQRIENEEQLE 684

Query: 450 ESQIAESDQTAKELEQ-------------KIISAVELLQNYKKEQDELQMERD---KAVK 493
           E ++ E +Q  +ELEQ             +I   +E L++ K E +EL+ E +   KA++
Sbjct: 685 E-KLEELEQLEEELEQLREELEELLKKLGEIEQLIEELESRKAELEELKKELEKLEKALE 743

Query: 494 EAEELRKSRKEASSSSHMPQFFSDF 518
             EELR+   +A   + + +     
Sbjct: 744 LLEELREKLGKAGLRADILRNLLAQ 768

Length = 908

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.0 bits (116), Expect = 1e-05
 Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 12/135 (8%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
            A+   +AE   ++A  EAL++   E    E +++ +A E   AEELK+ +E        K
Sbjct: 1677 AEEAKKAEEDEKKA-AEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN------K 1729

Query: 423  LELERMKKQHDE---VMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
            ++ E  KK+ +E     EE +   ++K  +     E ++ A+E+ ++  + +E  +   +
Sbjct: 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--EELDE 1787

Query: 480  EQDELQMERDKAVKE 494
            E ++ +ME DK +K+
Sbjct: 1788 EDEKRRMEVDKKIKD 1802

Length = 2084

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 48.1 bits (114), Expect = 1e-05
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
            R +  + SP LS+   +  + ++ + + FL S    + VH DL   N+L+    + K+ 
Sbjct: 225 RRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLVKIC 281

Query: 670 DFGISRFL--SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           DFG++R +    N IS  +T L           +M PE + +   T  SDV+SFGI+L  
Sbjct: 282 DFGLARDIMRDSNYISKGSTFL--------PLKWMAPESIFNNLYTTLSDVWSFGILLWE 333

Query: 728 LLT 730
           + T
Sbjct: 334 IFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 48.2 bits (115), Expect = 2e-05
 Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 34/179 (18%)

Query: 360  DQLAQAMAEAENSRREAFEE------ALRRGKAEKDA----IESIRRAKAS-ESLYAEEL 408
            ++L Q + E E    E  E+       L   + E +     +E +   K   E    E  
Sbjct: 824  ERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELE 883

Query: 409  KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA-------- 460
            + ++E EE L   + EL  +K++ +++ E L+    +   LE ++ E ++          
Sbjct: 884  EEKEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTL 943

Query: 461  -KELEQKI--------------ISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
              ELE++I              + A+E  +  ++  +EL+ +R+   +  E+L +  +E
Sbjct: 944  ETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEE 1002

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 47.8 bits (114), Expect = 2e-05
 Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 28/181 (15%)

Query: 356 DNLYDQLAQAMAEAENSRRE------AFEEALRRGKAEKDAIESIRRAKASESLYAEEL- 408
            +L D L +   + E   R+               +  +  +E +           EEL 
Sbjct: 698 RSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQ 757

Query: 409 KRRKEFEEAL-------ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAE------ 455
           +R +E EE L       A  K E+E ++++   + EEL+   ++    E ++        
Sbjct: 758 ERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELE 817

Query: 456 --------SDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
                    +Q  +ELE++I    E L   ++E +EL+ E ++  +E EEL   ++E   
Sbjct: 818 SLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELED 877

Query: 508 S 508
            
Sbjct: 878 E 878

Length = 1163

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 48.5 bits (116), Expect = 2e-05
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 11/148 (7%)

Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEA------LAN 420
           E    +    E+ L   + E   +         ES+  EEL+ R KE E        L +
Sbjct: 552 EELKKKLAELEKKLDELEEELAELLKELEELGFESV--EELEERLKELEPFYNEYLELKD 609

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + ELER +K+  ++ EEL  A ++ +  E ++ E  +  +ELE+K   + E  +  ++E
Sbjct: 610 AEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY--SEEEYEELREE 667

Query: 481 QDELQMERDKAVKEAEELRKSRKEASSS 508
             EL  E      E EEL K R+E   +
Sbjct: 668 YLELSRELAGLRAELEELEKRREEIKKT 695

Length = 880

>gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown]

 Score = 47.4 bits (113), Expect = 2e-05
 Identities = 29/158 (18%), Positives = 65/158 (41%), Gaps = 5/158 (3%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRG--KAEKDAIESIRRAKASESLYAEELKRRKE 413
           D +  +L +   E    + +  E  L     K+ +  IE + + + +  L  EE +   +
Sbjct: 79  DEINAKLQELRKEYRELKEKRNEFNLGGRSIKSLEREIERLEKKQQTSVLTPEEERELVQ 138

Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLES---QIAESDQTAKELEQKIISA 470
             + L     + ++  ++++++ E      + K        +I E    A+E  +++I  
Sbjct: 139 KIKELRKELEDAKKALEENEKLKELKAEIDELKKKAREIHEKIQELANEAQEYHEEMIKL 198

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSS 508
            E     +KE DEL  E  +  K+ +EL +  +   + 
Sbjct: 199 FEEADELRKEADELHEEFVELSKKIDELHEEFRNLQNE 236

Length = 294

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 48.5 bits (116), Expect = 2e-05
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 7/157 (4%)

Query: 356 DNLYDQLAQAMAEAEN-SRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR---- 410
             L   LA+  AE E    R A           +      R  +A E L   E +     
Sbjct: 729 SALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788

Query: 411 --RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
              ++ +E L   +  L+ ++ +   + EE     ++   LE +IA +++  ++LE++I 
Sbjct: 789 AQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE 848

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
              E +++   E +EL+   ++   E E L   R   
Sbjct: 849 ELSEDIESLAAEIEELEELIEELESELEALLNERASL 885

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 48.5 bits (116), Expect = 2e-05
 Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
            L +  AE      EA     R    E+    + RR +  E    E  +  +     +  
Sbjct: 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863

Query: 421 GKLELERMKKQHDEVMEE-------LQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
            +  +E ++ + + ++ E       L +   +   L  ++ E +    EL +++    E 
Sbjct: 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREK 923

Query: 474 LQNYKKEQDELQMERD 489
           L   +   + L++  D
Sbjct: 924 LAQLELRLEGLEVRID 939

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 47.3 bits (112), Expect = 2e-05
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 11/104 (10%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+   L FLH      I++ DLK  N++LD+    K++DFG+ +   ++ +    T  
Sbjct: 107 AAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMVDGVTTRT 160

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            C     GT  Y+ PE +A        D +++G++L  +L G+P
Sbjct: 161 FC-----GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 199

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 47.4 bits (113), Expect = 3e-05
 Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 17/166 (10%)

Query: 356 DNLYDQLAQAMAEAENS------RREAFEEALRRGKAE----KDAIESIRRAKASESLYA 405
           +N  D+L+Q +++A           E  E+   + K      ++ + S+ +   +     
Sbjct: 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSEL 760

Query: 406 EEL-KRRKEFEEALANGKLEL---ERMKKQH--DEVMEELQIALDQKSLLESQIAESDQT 459
           +EL  R +E EE L   +  L   E         E+  EL    ++ S +E+++ E +Q 
Sbjct: 761 KELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQK 820

Query: 460 AKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
              L  +     + +Q  ++++ +L+ E+ K++++  E    +KE 
Sbjct: 821 LNRLTLEKEYLEKEIQELQEQRIDLK-EQIKSIEKEIENLNGKKEE 865

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 47.4 bits (112), Expect = 3e-05
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 17/132 (12%)

Query: 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
           +Y ++ + + +     KD   PL  QTR  I  +L   + ++H  K   ++H D+K  NI
Sbjct: 249 LYSFMYDEAFD----WKDR--PLLKQTR-AIMKQLLCAVEYIHDKK---LIHRDIKLENI 298

Query: 659 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDV 718
            L+ +    L DFG +    +   + +   +       GT A   PE LA       +D+
Sbjct: 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWV-------GTVATNSPEILAGDGYCEITDI 351

Query: 719 YSFGIILLRLLT 730
           +S G+ILL +L+
Sbjct: 352 WSCGLILLDMLS 363

Length = 501

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 46.5 bits (110), Expect = 3e-05
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 12/114 (10%)

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           I  + ++   ++ LHS     IV+ D+KP N+LLD     +LSD G++      E+    
Sbjct: 98  IHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAV-----ELKDGK 149

Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 740
           T     T   GT  YM PE L     +   D ++ G  +  ++ GR      KE
Sbjct: 150 TI----TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE 199

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 46.6 bits (110), Expect = 3e-05
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           A E+C  L  LH      IV+ DLKP NILLD +   ++SD G++  + + +      T+
Sbjct: 108 AAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ------TI 158

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
             R    GT  YM PE + +   T   D ++ G +L  ++ G+
Sbjct: 159 KGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|238182 cd00293, USP_Like, Usp: Universal stress protein family

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 20/119 (16%)

Query: 46  KIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKV 103
           +I VAV    +ES+  L WA +     G  + ++HV  P                     
Sbjct: 1   RILVAVDGS-EESERALRWAARLARRLGAELVLLHVVDPPPSSAA--------------- 44

Query: 104 QAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGA 162
               E+  ++    L+       + GV+ E          + ILE     G   +VMG+
Sbjct: 45  -ELAELLEEEARALLEALREALAEAGVKVE-TVVLEGDPAEAILEAAEELGADLIVMGS 101

The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity. Length = 130

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 47.0 bits (112), Expect = 4e-05
 Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 49/186 (26%)

Query: 360 DQLAQAMAEAENSRREAFEEAL-------RRGKAEK--------------------DAIE 392
           +++  A  E    RR+  EEA        R+ +AE+                      +E
Sbjct: 147 EEIINAKPEE---RRKLIEEAAGVSKYKERKEEAERKLERTEENLERLEDLLEELEKQLE 203

Query: 393 SIRRAKASESLYAEELKRRKEFEEALANGKL------------ELERMKKQHDEVMEELQ 440
            + R       Y E     +E E AL   KL            EL R++++ +E+ EEL+
Sbjct: 204 KLERQAEKAERYQELKAELRELELALLLAKLKELRKELEELEEELSRLEEELEELQEELE 263

Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
            A  +   L+S++       +EL +++    E L   K+E +EL+ E     +  EEL  
Sbjct: 264 EAEKEIEELKSEL-------EELREELEELQEELLELKEEIEELEGEISLLRERLEELEN 316

Query: 501 SRKEAS 506
             +E  
Sbjct: 317 ELEELE 322

Length = 1163

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 47.0 bits (112), Expect = 4e-05
 Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 12/154 (7%)

Query: 360 DQLAQAMAE-----AENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF 414
           ++L +   E     AE    EA  E L     E +  +          L  +      E 
Sbjct: 344 EKLEELKEELESLEAELEELEAELEELESRLEELEE-QLETLRSKVAQLELQIASLNNEI 402

Query: 415 EEALANGKLE-LERMKKQHDEVMEELQIALD--QKSLLESQIAESDQTAKELEQKIISAV 471
           E   A  +LE LE  +++  + +EEL   L+  +   L++++ E ++  +EL++++    
Sbjct: 403 ERLEA--RLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLE 460

Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
           E L+  ++E +E +   D A +E  +L+ +R ++
Sbjct: 461 EALEELREELEEAEQALDAAERELAQLQ-ARLDS 493

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 46.1 bits (109), Expect = 4e-05
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 19/136 (13%)

Query: 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661
                 +  R+ CK N   +       I  ++ + L ++H    H I HGD+KP NI++D
Sbjct: 110 VENTKEIFKRIKCK-NKKLIK-----NIMKDMLTTLEYIHE---HGISHGDIKPENIMVD 160

Query: 662 ANFVSKLSDFGISRFLSQN----EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSD 717
            N    + D+GI+     +    E S     L      +GT  Y   +      +T + D
Sbjct: 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDL-----HRGTLYYAGLDAHNGACVTRRGD 215

Query: 718 VYSFGIILLRLLTGRP 733
           + S G  +L+   G  
Sbjct: 216 LESLGYCMLK-WAGIK 230

Length = 294

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 4e-05
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 26/209 (12%)

Query: 536 IGEGGYGSIYKGLLRHM-QV-AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    +++  QV A+K+L+   +   +E   F++E D+L       +  L  
Sbjct: 9   IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHY 68

Query: 591 ACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A        LV +Y   G L   LS  ++  P     R  +A     +++ + S      
Sbjct: 69  AFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPED-MARFYLA----EMVLAIDSVHQLGY 123

Query: 649 VHGDLKPANILLDANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           VH D+KP N+LLD N   +L+DFG   R L+   + SN           GT  Y+ PE L
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAV--------GTPDYISPEIL 175

Query: 708 -----ASGELTPKSDVYSFGIILLRLLTG 731
                  G   P+ D +S G+ +  +L G
Sbjct: 176 QAMEDGKGRYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 47.1 bits (112), Expect = 5e-05
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 11/145 (7%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
           + L + +AE E  +    E   R  + E   +E+++  +         L+  +E      
Sbjct: 235 EALEERLAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEE------ 288

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
               ++ER+++   E+ E  +     ++LLE      ++  K LE+++    E L+  + 
Sbjct: 289 ----KIERLEELEREIEELEEELEGLRALLEELEELLEKL-KSLEERLEKLEEKLEKLES 343

Query: 480 EQDELQMERDKAVKEAEELRKSRKE 504
           E +EL  E+++  K  EE  K  +E
Sbjct: 344 ELEELAEEKNELAKLLEERLKELEE 368

Length = 908

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.1 bits (111), Expect = 5e-05
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 350  LDGSVDDNLYDQLAQAMA-EAENSRREAFEEALR----RGKAEKDAIESIRRA----KAS 400
            L  S  D  +D      A EA        EEA +    + +  + A E+ ++A    KA 
Sbjct: 1072 LKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE 1131

Query: 401  ESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
            E+  AE+ ++ +E  +A    ++E+ R K +     EE + A D K    ++ AE  + A
Sbjct: 1132 EARKAEDARKAEEARKAEDAKRVEIAR-KAEDARKAEEARKAEDAKKAEAARKAEEVRKA 1190

Query: 461  KEL----EQKIISAVELLQNYKKEQDELQMERDK---AVKEAEELRKSRKEA 505
            +EL    + +   A    +  +K ++  + E  K   AVK+AEE +K  +EA
Sbjct: 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEA 1242

Length = 2084

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 47.0 bits (112), Expect = 5e-05
 Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 373 RREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQH 432
           R E   E L   + E    E       +E          +E EE L   +LE+  ++++ 
Sbjct: 233 RLEELREELEELQEELKEAEEELEELTAEL---------QELEEKLEELRLEVSELEEEI 283

Query: 433 DEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAV 492
           +E+ +EL    ++ S LE Q     +    LE+++      L+  + + DEL  E  +  
Sbjct: 284 EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELE 343

Query: 493 KEAEELRKSRKEAS 506
           ++ EEL++  +   
Sbjct: 344 EKLEELKEELESLE 357

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|224755 COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]

 Score = 45.0 bits (107), Expect = 6e-05
 Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 24/155 (15%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
            +LA+A        R+A  +A+ R K  +  +E  +         AE+L+ +   E AL 
Sbjct: 38  SELAKA--------RQALAQAIARQKQLERKLEEAQA-------RAEKLEEKA--ELALQ 80

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
            G  +L R      E +EE Q   D    LE+++ ++++  ++L++++ +  + +   + 
Sbjct: 81  AGNEDLAR------EALEEKQSLEDLAKALEAELQQAEEQVEKLKKQLAALEQKIAELRA 134

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF 514
           +++ L   R  A K  E++ +S    SSSS M  F
Sbjct: 135 KKEAL-KARKAAAKAQEKVNRSLGGGSSSSAMAAF 168

Length = 225

>gnl|CDD|217843 pfam04012, PspA_IM30, PspA/IM30 family

 Score = 44.7 bits (106), Expect = 6e-05
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
             LAQ +A  +   R+  E+  +  K E  A  ++   K +E L  E L      E+   
Sbjct: 44  QALAQVIARQKQLERKLEEQKEQAKKLENKARAALT--KGNEELAREALAEIATLEKQAE 101

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
                        +  + + + A++Q   L  Q+A        LE KI       Q  K 
Sbjct: 102 -----------ALETQLTQQRSAVEQ---LRKQLA-------ALETKI-------QQLKA 133

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF 514
           ++  L+  R KA K  E +  S   AS+ S    F
Sbjct: 134 KKTALKA-RLKAAKAQEAVNTSLGSASTESATDSF 167

This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma(54) containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator. Length = 220

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 45.6 bits (108), Expect = 6e-05
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 21/206 (10%)

Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVG 590
           +G+GG+G +    +R      A K L+   L+    ++    E  IL+K+    +V+L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 591 ACPEVWT---LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           A  +  T   LV   +  G L   + +  + +P            ++ S L  LH     
Sbjct: 61  AF-QTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---R 116

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            I++ DLKP N+LLD +   ++SD G++  L   +  +            GT  +M PE 
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA--------GTPGFMAPEL 168

Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L   E     D ++ G+ L  ++  R
Sbjct: 169 LQGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 7e-05
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 21/152 (13%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRA-----KASESLYAEELKRRKE---F 414
            A+A  +AE  R+   EEA +   A+K   E++++A      A E+  AEE +  +E   F
Sbjct: 1202 AEAARKAEEERK--AEEARKAEDAKK--AEAVKKAEEAKKDAEEAKKAEEERNNEEIRKF 1257

Query: 415  EEA-LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
            EEA +A+       +K +     +EL+ A ++K   E++ AE  + A E ++K   A E 
Sbjct: 1258 EEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK---AEE- 1313

Query: 474  LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
                 K+ DE + + ++A K+A+  +K  +EA
Sbjct: 1314 ----AKKADEAKKKAEEAKKKADAAKKKAEEA 1341

Length = 2084

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 46.2 bits (110), Expect = 8e-05
 Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           +++      E    E  E   R  + ++         +  E+L  E  +   E EEA   
Sbjct: 303 EISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEE 362

Query: 421 GKLELERMKKQHDEVMEELQIALD----QKSLLESQIAESDQTAKELEQKIISAVELLQN 476
            + +L  + ++ +E+ E L+  L     + + + +++ E  +  + LE+++    E L++
Sbjct: 363 LEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLED 422

Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEA 505
            K+E  EL+ E ++   E EEL +  +E 
Sbjct: 423 LKEELKELEAELEELQTELEELNEELEEL 451

Length = 1163

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 8e-05
 Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 7/148 (4%)

Query: 364  QAMAEAENSRR-EAFEEALRRGKAEK-DAIESIRRA-----KASESLYAEELKRRKEFEE 416
            QA  +AE +R+ +  ++A  + KA++    E  ++A     KA E+  A+E K++ E  +
Sbjct: 1269 QAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1328

Query: 417  ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
              A+   +     K+  E  +    A   ++    + AE+ +  KE  +K   A +    
Sbjct: 1329 KKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388

Query: 477  YKKEQDELQMERDKAVKEAEELRKSRKE 504
             KK+ DE + + ++  K+A+EL+K+   
Sbjct: 1389 EKKKADEAKKKAEEDKKKADELKKAAAA 1416

Length = 2084

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 45.4 bits (107), Expect = 8e-05
 Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)

Query: 573 EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI- 629
           E  +L   RHP L  L  +    +    V EY   G L   LS ++    +  + R R  
Sbjct: 45  ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RER---VFSEDRARFY 100

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT-- 687
             E+ S L +LHS K  ++V+ DLK  N++LD +   K++DFG    L +  I    T  
Sbjct: 101 GAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMK 154

Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           T C      GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 155 TFC------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 45.2 bits (107), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           FL S K    +H DL   NILL  N V K+ DFG++R + ++             D +  
Sbjct: 188 FLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK------GDARLP 238

Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE +     T +SDV+SFG++L  + +
Sbjct: 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 9e-05
 Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 16/155 (10%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
            A+ + +AE  +++  E+  ++   EK   E +++A+    + A E  ++ E ++  A   
Sbjct: 1622 AEELKKAEEEKKKV-EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680

Query: 423  LELERMKKQHDEVM----EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
             + E  +K+  E +    EE + A + K     +  ++++  K  E+  I A E     K
Sbjct: 1681 KKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA----K 1736

Query: 479  KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
            KE +E     DK  K+AEE +K  +E    +H+ +
Sbjct: 1737 KEAEE-----DK--KKAEEAKKDEEEKKKIAHLKK 1764

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 9e-05
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%)

Query: 355  DDNLYDQLAQAMAEAENSRRE---AFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
            D N+  + A+   +AE +R E      E  ++ KAE+       + KA E   AEE K++
Sbjct: 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634

Query: 412  KE-FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
             E  ++  A  K + E +KK  +E   +      +K+  + + AE  + A+E E+K   A
Sbjct: 1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAA-EEAKKAEEDKKKAEEAKKAEEDEKKAAEA 1693

Query: 471  VELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
            ++      K+ +EL+ +  +  K+AEEL+K+ +E
Sbjct: 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEE 1727

Length = 2084

>gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin

 Score = 45.3 bits (108), Expect = 9e-05
 Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 20/161 (12%)

Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAI-ESIRRAKASESLYAEELKRRK---- 412
               L + + E E  R+E +EE L+    E++ + E I R +  +   A+E + ++    
Sbjct: 72  GRAVLQEQIEEREKRRQEEYEERLQ----EREQMDEIIERIQEEDEAEAQEKREKQKKLR 127

Query: 413 -EFEEALANGKLELERMKKQHDEVMEELQIA------LDQKSLLESQIAESDQTAKELEQ 465
            E +E     ++E +  +K+ +   EEL+I        +++   E++  E  +  KE E 
Sbjct: 128 EEIDEFNEE-RIERKEEEKERER-EEELKILEYQREKAEREEEREAERRERKE-EKEREV 184

Query: 466 KIISA-VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
             + A  E  ++ ++E DEL+ +  +   E +E +K ++EA
Sbjct: 185 ARLRAQQEEAEDEREELDELRADLYQEEYERKERQKEKEEA 225

Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). Length = 349

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 45.4 bits (107), Expect = 9e-05
 Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 32/173 (18%)

Query: 573 EIDILSKIRHPNLVTLVGA-------C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLS 622
           E  IL  I HP+++ L G        C   P   T +Y YL   + +  ++  D      
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYL---AAKRNIAICD------ 183

Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
               + I   +   + +LH    + I+H D+K  NI ++      L DFG + F    +I
Sbjct: 184 ---ILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACF--PVDI 235

Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           ++N           GT A   PE LA     P  D++S GI+L  + T   +L
Sbjct: 236 NANKYY-----GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283

Length = 391

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 45.5 bits (108), Expect = 1e-04
 Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 373 RREAFEEALRRGKAE--KDAIESIRRAKAS-ESLYAEELKRRKEFEEALANGKLELERMK 429
                E AL   K +  +  +E +    +  E    E  +  +E E+ +   K ELE ++
Sbjct: 221 ELRELELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELR 280

Query: 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489
           ++ +E+ EEL    ++   LE +I+   +  +ELE +       L+  ++  +EL+ + +
Sbjct: 281 EELEELQEELLELKEEIEELEGEISLLRERLEELENE-------LEELEERLEELKEKIE 333

Query: 490 KAVKEAEELRKSRKEASS 507
              +E EE     +E   
Sbjct: 334 ALKEELEERETLLEELEQ 351

Length = 1163

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 45.4 bits (108), Expect = 1e-04
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 2/143 (1%)

Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELER 427
           E      E  +E L+  + E + +      +  E    E      E EE +   + EL  
Sbjct: 235 EELREELEELQEELKEAEEELEELT--AELQELEEKLEELRLEVSELEEEIEELQKELYA 292

Query: 428 MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487
           +  +   + ++ QI  ++ + LE Q+ E +   +ELE K+    E L   +++ +EL+ E
Sbjct: 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEE 352

Query: 488 RDKAVKEAEELRKSRKEASSSSH 510
            +    E EEL    +E  S   
Sbjct: 353 LESLEAELEELEAELEELESRLE 375

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional

 Score = 45.2 bits (108), Expect = 1e-04
 Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 7/117 (5%)

Query: 385 KAEKDAIESIRRAKASESLYAEELKRRKEFE--EALANGKLELERMKKQHDEVMEELQIA 442
           +AE++A   +  AK      AE +K+    E  E +   + E E+  ++    +++L+  
Sbjct: 35  EAEEEAKRILEEAKKE----AEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKR 90

Query: 443 LDQK-SLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
           L QK   L+ ++   ++  +ELE+K     +  Q  +K+++EL+   ++ ++E E +
Sbjct: 91  LLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147

Length = 520

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 33/163 (20%)

Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           L+ E+LP G +   L  KD       +T+  IA  + ++     S      +H D+KP N
Sbjct: 78  LIMEFLPGGDMMTLLMKKDTLT--EEETQFYIAETVLAI----DSIHQLGFIHRDIKPDN 131

Query: 658 ILLDANFVSKLSDFGI---------------------SRFLSQNEISSNNTTLCCRTDPK 696
           +LLD+    KLSDFG+                     S F  QN  S        R   +
Sbjct: 132 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQ 191

Query: 697 ------GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 GT  Y+ PE           D +S G+I+  +L G P
Sbjct: 192 LAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 16/142 (11%)

Query: 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659
           Y+   +  +++ LS  D S  L+    +    ++   + FL S    + VH DL   N+L
Sbjct: 214 YKGSNDSEVKNLLS-DDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVL 269

Query: 660 LDANFVSKLSDFGISRFL--SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSD 717
           L    + K+ DFG++R +    N +S  +T L  +        +M PE +     T  SD
Sbjct: 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVK--------WMAPESIFDNLYTTLSD 321

Query: 718 VYSFGIILLRL--LTGRPALGI 737
           V+S+GI+L  +  L G P  G+
Sbjct: 322 VWSYGILLWEIFSLGGTPYPGM 343

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 33/164 (20%)

Query: 576 ILSKIRHPNLV----TLVG---AC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQT 625
           +L  + HP+++    TLV     C   P   + +Y YL              S PL    
Sbjct: 110 LLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTK-----------RSRPLPIDQ 158

Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
            + I  ++   L +LH+     I+H D+K  NI ++      + D G ++F     ++  
Sbjct: 159 ALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQF---PVVAPA 212

Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
              L       GT     PE LA  +   K+D++S GI+L  +L
Sbjct: 213 FLGLA------GTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 44.1 bits (105), Expect = 1e-04
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 39/211 (18%)

Query: 532 PSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HP 583
             LK+ +G +G +   +L+H       +Q  IK  + +++        E  +   ++ +P
Sbjct: 20  KKLKLIDGKFGKVS--VLKHKPTQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNP 69

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N + L  +    +   L+ +Y+ +G L D L        LS     +I  +L   L  LH
Sbjct: 70  NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLK---KEGKLSEAEVKKIIRQLVEALNDLH 126

Query: 642 SCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
               H+I+H D+K  N+L D A     L D+G    L +       T  C      GT  
Sbjct: 127 K---HNIIHNDIKLENVLYDRAKDRIYLCDYG----LCKII----GTPSCYD----GTLD 171

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           Y  PE +         D ++ G++   LLTG
Sbjct: 172 YFSPEKIKGHNYDVSFDWWAVGVLTYELLTG 202

Length = 267

>gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)

 Score = 45.5 bits (108), Expect = 1e-04
 Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 43/184 (23%)

Query: 341 DLQSSPPSVLDGSVDDNLYD-QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399
           DL    P +++GS  D LY   L     +  +    A E  LR            R  +A
Sbjct: 569 DLD---PQLVEGSDSDTLYGVSLDLQRLDVPDY--AANETELRE-----------RLQQA 612

Query: 400 SESLYAEELKRRKEFEEALA---------------------NGKLELERMKKQHDEVMEE 438
            E+L +    ++K+ EE L                        +L+L+R++ +   + ++
Sbjct: 613 EEALQSAV-AKQKQAEEQLVQANAELEEQKRAEAEARTALKQARLDLQRLQNEQQSLKDK 671

Query: 439 LQIAL-DQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEE 497
           L++A+ ++K   E+Q+ + D   K+L ++  +    L+  K +  EL+ ER    +  E 
Sbjct: 672 LELAIAERKQQAETQLRQLDAQLKQLLEQQQAF---LEALKDDFRELRTERLAKWQVVEG 728

Query: 498 LRKS 501
              +
Sbjct: 729 ELDN 732

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication. Length = 1198

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 45.0 bits (107), Expect = 2e-04
 Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 14/165 (8%)

Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
            L +++AQ   E      E  E   R  +AE++  E+    +  E+   +  +  K   E
Sbjct: 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803

Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
           AL   + EL  + ++   + E L+    + +  E ++ + ++  +EL + I S    ++ 
Sbjct: 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863

Query: 477 YKKEQDELQMERDKAVKE--------------AEELRKSRKEASS 507
            ++  +EL+ E +  + E               EEL +  +E  S
Sbjct: 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 44.6 bits (105), Expect = 2e-04
 Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 48/221 (21%)

Query: 534 LKIGEGGYGSIYKGLLRHM--QVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
            ++G G YG++   L R    +VAIK L+    S        +E+ +L  ++H N++ L+
Sbjct: 21  KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLL 80

Query: 590 GACPEVWT------------LVYEYLPN--GSL--EDRLSCKDNSPPLSWQTRIR-IATE 632
               +V+T            LV  ++    G L   ++LS          + RI+ +  +
Sbjct: 81  ----DVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLS----------EDRIQFLVYQ 126

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR 692
           +   L ++H+     I+H DLKP N+ ++ +   K+ DFG++R  + +E++    T   R
Sbjct: 127 MLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR-QTDSEMTGYVVTRWYR 182

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             P+    +M          T   D++S G I+  +LTG+P
Sbjct: 183 A-PEVILNWM--------HYTQTVDIWSVGCIMAEMLTGKP 214

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein

 Score = 44.6 bits (106), Expect = 2e-04
 Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)

Query: 337 PSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRR 396
           P  ++L S    ++D   +DNL D L   +A A+    +  ++       E++ +E   +
Sbjct: 136 PVVQELVSIFNDLIDSIKEDNLKDDLESLIASAKEELDQLSKKLAELKAEEEEELERALK 195

Query: 397 AKASESL--YAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIA 454
            K  E L    EEL  R E +EA        ++++ + +   EEL+   ++K  L  ++ 
Sbjct: 196 EKREELLSKLEEELLARLESKEAA-----LEKQLRLEFEREKEELRKKYEEK--LRQELE 248

Query: 455 E-----SDQTAKELEQKIISAVELLQNYKKEQDE-LQMERD----------KAVKEAEEL 498
                   +   EL  +   A+EL + + KE  E ++ ER+            +K  E+ 
Sbjct: 249 RQAEAHEQKLKNELALQ---AIELQREFNKEIKEKVEEERNGRLAKLAELNSRLKGLEKA 305

Query: 499 RKSRKEASSSSH 510
             SR EA   +H
Sbjct: 306 LDSRSEAEDENH 317

Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains. Length = 493

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 610 DRLSCKDNSP--PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
           D    +D     PL     +R ++++   + FL S    + +H D+   N+LL    V+K
Sbjct: 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAK 252

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL 725
           + DFG++R +       N++    + + +    +M PE +     T +SDV+S+GI+L
Sbjct: 253 ICDFGLARDI------MNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 304

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 45.0 bits (106), Expect = 2e-04
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 1/140 (0%)

Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELER 427
              N  R    + L R + E+         K  E L A+ LK  KE E+     + EL+ 
Sbjct: 233 LKLNEERIDLLQELLRDEQEEIESSKQELEKEEEIL-AQVLKENKEEEKEKKLQEEELKL 291

Query: 428 MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487
           + K+ +E+  EL     +K   E ++ ES++  K+LE+++    E ++  +KE  EL+++
Sbjct: 292 LAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIK 351

Query: 488 RDKAVKEAEELRKSRKEASS 507
           R+   +E E+L K +++   
Sbjct: 352 REAEEEEEEQLEKLQEKLEQ 371

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 44.2 bits (104), Expect = 2e-04
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
            K     L+ +  I  + ++   + FL S K    +H DL   NILL  N V K+ DFG+
Sbjct: 172 YKK---VLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGL 225

Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           +R + +      +     + D +    +M PE +     T +SDV+SFG++L  + +
Sbjct: 226 ARDIYK------DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.9 bits (104), Expect = 2e-04
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 23/167 (13%)

Query: 568 SEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLS--CKDNSPPLS 622
              QQEI    +++HPN++  V +     E++ +V   +  GS ED L     +  P   
Sbjct: 44  KLLQQEIITSRQLQHPNILPYVTSFIVDSELY-VVSPLMAYGSCEDLLKTHFPEGLP--- 99

Query: 623 WQTRIR-IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 681
            +  I  I  ++ + L ++HS      +H  +K ++ILL  +    LS    S  +    
Sbjct: 100 -ELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSM---- 151

Query: 682 ISSNNTTLCCRTDPKGT---FAYMDPEFLASGEL--TPKSDVYSFGI 723
           I            PK +     ++ PE L         KSD+YS GI
Sbjct: 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGI 198

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 44.2 bits (104), Expect = 2e-04
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 620 PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR--FL 677
           PL+ +  I  + ++   + FL S K    +H DL   NILL  N V K+ DFG++R  + 
Sbjct: 170 PLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK 226

Query: 678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             + +   +  L           +M PE +     T +SDV+SFG++L  + +
Sbjct: 227 DPDYVRKGSARL--------PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 43.9 bits (103), Expect = 2e-04
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 41/227 (18%)

Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKML-HP-HSLQGPSEFQQEIDIL 577
           E+     N  P   +G G YGS+         ++VA+K L  P  S+       +E+ +L
Sbjct: 14  EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 70

Query: 578 SKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTR 626
             ++H N++ L+       +L     VY   +L    L + + C+    D+   L +Q  
Sbjct: 71  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-- 128

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
                 +   L ++HS     I+H DLKP+N+ ++ +   K+ DFG++R           
Sbjct: 129 ------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 173

Query: 687 TTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGR 732
                 T    T  Y  PE + +        D++S G I+  LLTGR
Sbjct: 174 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 44.7 bits (106), Expect = 3e-04
 Identities = 24/130 (18%), Positives = 58/130 (44%), Gaps = 8/130 (6%)

Query: 382 RRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEALANGKLELERMKKQHDEVMEELQ 440
           R  K  ++ +  +           + LK   +  E+ L   + +LE +++Q +E+  EL 
Sbjct: 667 RELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726

Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
              ++   L+S++       +ELE+++    E L+  ++  +EL+ E +   +   +L++
Sbjct: 727 ALEEELEQLQSRL-------EELEEELEELEEELEELQERLEELEEELESLEEALAKLKE 779

Query: 501 SRKEASSSSH 510
             +E      
Sbjct: 780 EIEELEEKRQ 789

Length = 1163

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 44.0 bits (104), Expect = 3e-04
 Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 7/153 (4%)

Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
            +++ + + E E    E  E  L   + E   +E       S+ L   EL    E +  +
Sbjct: 405 LEEIQEELEELEKELEEL-ERELEELEEEIKKLEEQINQLESKELMIAELAGAGE-KCPV 462

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA----VELL 474
              +L  E  K+  +    EL+  L+++   E + AE  +  +ELE+++       +ELL
Sbjct: 463 CGQELPEEHEKELLELYELELE-ELEEELSREKEEAELREEIEELEKELRELEEELIELL 521

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
           +  +  ++EL+ + +K     EEL + +++   
Sbjct: 522 ELEEALKEELEEKLEKLENLLEELEELKEKLQL 554

Length = 908

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 44.3 bits (105), Expect = 3e-04
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 32/166 (19%)

Query: 373 RREAFEEA-------LRRGKAEK-------------DAIESIRRAKASESLYAEELKRRK 412
           RR  FEEA        RR + E+             D +  + R   S    AE+ +R K
Sbjct: 157 RRAIFEEAAGISKYKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYK 216

Query: 413 EFEEALANGKL-----ELERMKKQHDEVMEELQIALDQKSLLESQIAESD---QTAK--- 461
           E +  L   +L      LE ++++ +E+ EEL+ A ++   L +++ E +   +  +   
Sbjct: 217 ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV 276

Query: 462 -ELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
            ELE++I    + L     E   L+ ++    +    L +  +E  
Sbjct: 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELE 322

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 43.9 bits (104), Expect = 4e-04
 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 385 KAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALD 444
            A K+  E I+  K       + +KR +  EE +   + ELE + ++ +E+  EL    +
Sbjct: 162 NAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELRE 221

Query: 445 QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD---ELQMERDKAVKEAEELRKS 501
           +   LE ++ E ++  +E+E+       L  + +K ++   EL+   ++  KE EEL + 
Sbjct: 222 ELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK 281

Query: 502 RKE 504
            KE
Sbjct: 282 VKE 284

Length = 880

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 43.9 bits (104), Expect = 4e-04
 Identities = 25/97 (25%), Positives = 47/97 (48%)

Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
           ++ +E EE +A  +  L  ++K+ +E+ EEL+    +   L  QI+   +    LE ++ 
Sbjct: 684 EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE 743

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
              E +    KE  EL+ E ++  +  EE  +   EA
Sbjct: 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 43.9 bits (104), Expect = 4e-04
 Identities = 28/145 (19%), Positives = 57/145 (39%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           Q         N  R+  E   +  + E    E        E    E  +  +  E  L  
Sbjct: 303 QKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEE 362

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + ELE ++ + +E+ E+L+    + + LE QIA  +   + LE ++    +  +  ++E
Sbjct: 363 LEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQE 422

Query: 481 QDELQMERDKAVKEAEELRKSRKEA 505
            +EL  + ++A  +  +      E 
Sbjct: 423 IEELLKKLEEAELKELQAELEELEE 447

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|226889 COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 43.7 bits (103), Expect = 4e-04
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 356 DNLYDQLAQAMAEAENSR---REAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
             + + L +   EA   R   R A ++ L + + +    +  ++   +E +   EL  + 
Sbjct: 38  SRILNTLEEFEKEANEKRAQYRSAKKKELSQLEEQLINQKKEQKNLFNEQIKQFELALQD 97

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQ-TAKELEQKIISAV 471
           E           LE +  + D+ +E L+  LD+ S    ++ +  Q TA+ +E+K  +  
Sbjct: 98  E-----IAKLEALELLNLEKDKELELLEKELDELSK---ELQKQLQNTAEIIEKKRENNK 149

Query: 472 EL----LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
                  +N KK ++ L++ER+K  ++  E     +  
Sbjct: 150 NEERLKFENEKKLEESLELEREKFEEQLHEANLDLEFK 187

Length = 438

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   NILL    ++K+ DFG++R +       N++    + + +    +M PE + 
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDI------RNDSNYVVKGNARLPVKWMAPESIF 289

Query: 709 SGELTPKSDVYSFGIILLRLLT 730
           +   T +SDV+S+GI+L  + +
Sbjct: 290 NCVYTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|206034 pfam13863, DUF4200, Domain of unknown function (DUF4200)

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQ---IALDQK-SLLESQIAESDQTAKELE 464
           KRR+  E      +L L+  +++ +   E L+     L++K   L+  + + D+  KE E
Sbjct: 5   KRREMEEV-----QLALDAKREEFERREELLKQREEELEKKEEELQESLIKFDKFLKENE 59

Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
            K   A +  +  KK + E + E  +   E EEL+   ++
Sbjct: 60  AKRRRAEKKAEEEKKLRKEKEEEIKELKAELEELKAEIEK 99

This family is found in eukaryotes. It is a coiled-coil domain of unknwon function. Length = 126

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 5e-04
 Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 26/166 (15%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIR----RAKASESLYAEELKRRKEFEEAL 418
            A+   +A+ ++++A EEA +  +A+K A E+ +    + KA E+  A+E K++ E  +  
Sbjct: 1427 AEEKKKADEAKKKA-EEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKA 1485

Query: 419  ANGKLELERMKKQHDEV---------MEELQIALDQKSLLESQIAESDQTAKEL----EQ 465
               K + E  KK+ DE           +E + A + K   E++ AE  + A E     E+
Sbjct: 1486 DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEK 1545

Query: 466  KIISAVELLQNYKKEQDELQME--------RDKAVKEAEELRKSRK 503
            K    ++  +  KK +++ + E        ++ A+++AEE +K+ +
Sbjct: 1546 KKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.6 bits (102), Expect = 5e-04
 Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
            A+   +AE +++   ++ +   KAE+       R +    LY EE K + E  +     K
Sbjct: 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619

Query: 423  LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL---QNYKK 479
            ++ E +KK  +E  +  Q+    K     +  ++++  K  E+  I A E     +  KK
Sbjct: 1620 IKAEELKKAEEEKKKVEQL----KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKK 1675

Query: 480  EQDELQMERDKAVKEAEELRKSRKEA 505
            + +E +   +   K AE L+K  +EA
Sbjct: 1676 KAEEAKKAEEDEKKAAEALKKEAEEA 1701

Length = 2084

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 43.1 bits (101), Expect = 5e-04
 Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 33/163 (20%)

Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           L+ E+LP G +   L  KD     + Q  I         ++ + +      +H D+KP N
Sbjct: 78  LIMEFLPGGDMMTLLMKKDTLSEEATQFYI------AETVLAIDAIHQLGFIHRDIKPDN 131

Query: 658 ILLDANFVSKLSDFGIS------------RFLSQNEIS-----SNNTTLCCRTDPK---- 696
           +LLDA    KLSDFG+             R L+ N  S     + N+     T  K    
Sbjct: 132 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQ 191

Query: 697 ------GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 GT  Y+ PE           D +S G+I+  +L G P
Sbjct: 192 LAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 43.1 bits (102), Expect = 6e-04
 Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 11/141 (7%)

Query: 373 RREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQH 432
             E  EE  +  +  ++ ++ ++  K     Y +  +  +E+ + L   +  L R++++ 
Sbjct: 264 LEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEI 323

Query: 433 DEVMEELQIALDQKSLLESQIAESDQTAKELE---------QKIISAVELLQNYKKEQDE 483
           + + E ++   +++  LE    +  +  K LE         ++  +  E L+  KK    
Sbjct: 324 NGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTG 383

Query: 484 LQMERDKAVKEAEELRKSRKE 504
           L  E  K  KE EEL K+++E
Sbjct: 384 LTPE--KLEKELEELEKAKEE 402

Length = 880

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 43.5 bits (103), Expect = 6e-04
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 9/152 (5%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           +  Q    A  +     E+  +  +     +E  +  +    L  E   +  E  E LA 
Sbjct: 284 EELQKELYALANEISRLEQQKQILRERLANLER-QLEELEAQL-EELESKLDELAEELAE 341

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE-------L 473
            + +LE +K++ + +  EL+    +   LES++ E ++  + L  K+             
Sbjct: 342 LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401

Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
           ++  +   + L+  R++  +E EEL K  +EA
Sbjct: 402 IERLEARLERLEDRRERLQQEIEELLKKLEEA 433

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 42.7 bits (100), Expect = 6e-04
 Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 20/160 (12%)

Query: 582 HPNLVTLVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C +  +    V EY+  G L   +  +   P    +   R  + E+   L
Sbjct: 55  HPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 109

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH      I++ DLK  N+LLD+    KL+D+G+ +   +     + T+  C     G
Sbjct: 110 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFC-----G 158

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 737
           T  Y+ PE L   +     D ++ G+++  ++ GR    I
Sbjct: 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 6e-04
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 43/215 (20%)

Query: 536 IGEGGYGSIYKGLL--------------RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR 581
           +G G    IY G+L              + ++V +K+L P        F +   ++ ++ 
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62

Query: 582 HPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
           H ++V L G C       +V E++  G L+  L     S  L+   + ++A +L S L +
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLD--LFMHRKSDVLTTPWKFKVAKQLASALSY 120

Query: 640 LHSCKPHSIVHGDLKPANILL-------DANFVSKLSDFGIS-RFLSQNEISSNNTTLCC 691
           L       +VHG++   NILL       +     KLSD GI    LS+ E        C 
Sbjct: 121 LEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQE--------CV 169

Query: 692 RTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIIL 725
              P     ++ PE +  S  L+  +D +SFG  L
Sbjct: 170 ERIP-----WIAPECVEDSKNLSIAADKWSFGTTL 199

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|222469 pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain binding to HIV

 Score = 42.7 bits (101), Expect = 6e-04
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 24/185 (12%)

Query: 329 TEGVSTLPPS-----KEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRR 383
            EG   LPPS     +E         L+ S+DD    +L+Q          E  +E    
Sbjct: 1   LEGPLGLPPSLLEKAEEIRSEGGIERLERSLDD--LPELSQRN-------EEILDEIKEL 51

Query: 384 GKAEKDAIESIRRA-------KASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
              E+   E +R           S  L AE  +  +++   L        +++ + +E  
Sbjct: 52  LDEEESEDEQLRAKYGERWTRPPSSELTAELREELRKYRGYLEQASESDAQLRSKLEEHE 111

Query: 437 EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAE 496
           E L++    +  LE+ +  S  +      ++   +  L+    + +EL+ ER+K ++E +
Sbjct: 112 ENLELLSGPEEELEALLPSSSPS---KTPEVSEQISRLRELLNKLNELKAEREKLLEELK 168

Query: 497 ELRKS 501
           E  + 
Sbjct: 169 EKAQD 173

The binding of the LYPxL motif of late HIV p6Gag and EIAV p9Gag to this domain is necessary for viral budding.This domain is generally central between an N-terminal Bro1 domain, pfam03097 and a C-terminal proline-rich domain. The retroviruses thus used this domain to hijack the ESCRT system of the cell. Length = 292

>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y

 Score = 43.0 bits (102), Expect = 6e-04
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 11/142 (7%)

Query: 362 LAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
           + +A  EAE  ++EA  EA       +  +E   + + +E L   E +R  + EE L   
Sbjct: 38  IEEAKKEAETLKKEALLEAKEEVHKLRAELERELKERRNE-LQRLE-RRLLQREETLDR- 94

Query: 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE- 480
             ++E + K+ + + ++ +   +++  L+ +  E ++   E  +++     L Q   KE 
Sbjct: 95  --KMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAEQREELERISGLTQEEAKEI 152

Query: 481 -----QDELQMERDKAVKEAEE 497
                ++E + E  K +KE EE
Sbjct: 153 LLEEVEEEARHEAAKLIKEIEE 174

Members of this family are RNase Y, an endoribonuclease. The member from Bacillus subtilis, YmdA, has been shown to be involved in turnover of yitJ riboswitch [Transcription, Degradation of RNA]. Length = 514

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 43.1 bits (102), Expect = 7e-04
 Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 5/149 (3%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEAL 418
           ++L + + E E    E  E+AL   + E + +E        E    EEL R+     + L
Sbjct: 680 EELEEKIEELEEKIAEL-EKALAELRKELEELEEELEQLRKE---LEELSRQISALRKDL 735

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
           A  + E+E+++++  ++ +EL     +   LE ++ E+++   E E +I      ++  K
Sbjct: 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK 795

Query: 479 KEQDELQMERDKAVKEAEELRKSRKEASS 507
           +E   L+   D+   E   L +       
Sbjct: 796 EELKALREALDELRAELTLLNEEAANLRE 824

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 42.5 bits (100), Expect = 7e-04
 Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 41/170 (24%)

Query: 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
           V +Y+P G +   L             R  IA   C++     S      +H D+KP NI
Sbjct: 79  VMDYIPGGDMMSLLIRLGIFE--EDLARFYIAELTCAI----ESVHKMGFIHRDIKPDNI 132

Query: 659 LLDANFVSKLSDFGI---------SRFLSQN------------EISSNNT---------- 687
           L+D +   KL+DFG+         S++  +             E S  +           
Sbjct: 133 LIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRR 192

Query: 688 ----TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 C      GT  Y+ PE L     T   D +S G+IL  +L G+P
Sbjct: 193 KRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail

 Score = 42.7 bits (101), Expect = 8e-04
 Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 33/174 (18%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR----- 410
            +L DQL +             E+A RR +AEKD +++    +A  +L  EE K      
Sbjct: 443 HDLTDQLGEG-----GRNVHELEKARRRLEAEKDELQAALE-EAEAALELEESKVLRAQV 496

Query: 411 -----RKEFEEALANGKLELERMKKQHDEVMEELQIALDQ-----------KSLLESQIA 454
                R E E  LA  + E E  +K H   +E LQ  L+            K  LE  I 
Sbjct: 497 ELSQIRSEIERRLAEKEEEFENTRKNHQRAIESLQATLEAEAKGKAEASRLKKKLEGDIN 556

Query: 455 ESDQTAKELEQKIISAVELLQNYKKEQD---ELQMERDKAVKEAEELRKSRKEA 505
           E +     L+    +  E  +N KK Q    ELQ + ++  +  E+ R+    A
Sbjct: 557 ELEIA---LDHANKANAEAQKNVKKYQQQVKELQTQVEEEQRAREDAREQLAVA 607

The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Length = 859

>gnl|CDD|205692 pfam13514, AAA_27, AAA domain

 Score = 42.8 bits (101), Expect = 8e-04
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 13/156 (8%)

Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
           GSV D L  +  +        R+     AL   K  K+    IR  +     + + +K  
Sbjct: 129 GSVRDELEKEADELWKP--RGRKPEINVAL---KELKELEAEIREVQLKTRTWKDLVKAL 183

Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQ---KSLLESQIAESDQTAKELEQKII 468
            E EE LAN + EL +++K+    +E L+  L     +  LE Q+A       E+     
Sbjct: 184 DEAEEELANLRKELRQLEKEKQR-LERLRRLLPLLAERKALEQQLAA----LGEVIDLPP 238

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
            AVE  +  + E    +   +   +  E L+    E
Sbjct: 239 DAVERYEEARAELRAARRNLELLTERLEALQAELDE 274

This domain is found in a number of double-strand DNA break proteins. This domain contains a P-loop motif. Length = 1118

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.8 bits (100), Expect = 9e-04
 Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 363  AQAMAEAENSRR-EAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
            A  + +AE  ++ E  ++A    KAE+D   ++R+A+  E+  AEE +  +  +      
Sbjct: 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE--EAKKAEEARIEEVMKLYEEEK 1605

Query: 422  KLELERMKKQHDEVM--EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
            K++ E  KK  +  +  EEL+ A ++K  +E    +  +  K+ E+  +   E     K 
Sbjct: 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE--LKKAEEENKIKA 1663

Query: 480  EQDELQMERDKAVKEAEELRKSRKE 504
             ++  + E DK  K+AEE +K+ ++
Sbjct: 1664 AEEAKKAEEDK--KKAEEAKKAEED 1686

Length = 2084

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 12/162 (7%)

Query: 356 DNLYDQLAQAMAEAENSRREAFE--EALRRGKAEKDAIES-IRRAKASESLYAEELKRRK 412
           + L  +L+   +E         E  + L     +   IE  I + +  E    E L+  +
Sbjct: 684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELE 743

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQ---------KSLLESQIAESDQTAKEL 463
           E   +L      ++   K+ +  +EEL+  L +           L  S+I E      +L
Sbjct: 744 EDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL 803

Query: 464 EQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
           E+++      L+  +++ + L +E++   KE +EL++ R + 
Sbjct: 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL 845

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 1/126 (0%)

Query: 380 ALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF-EEALANGKLELERMKKQHDEVMEE 438
           ++  G   K +  + +R          EL+ + E  EE L + K EL  ++   +E+  +
Sbjct: 651 SITGGSRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQ 710

Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
           L+    Q   L+ ++A  ++  ++L+ ++    E L+  ++E +ELQ   ++  +E E L
Sbjct: 711 LEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESL 770

Query: 499 RKSRKE 504
            ++  +
Sbjct: 771 EEALAK 776

Length = 1163

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.8 bits (100), Expect = 0.001
 Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 11/154 (7%)

Query: 360  DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
            D+   A  +AE + ++  EEA ++  A K   E  ++A  ++   AEE K++ +  +  A
Sbjct: 1357 DEAEAAEEKAEAAEKKK-EEAKKKADAAKKKAEEKKKADEAKK-KAEEDKKKADELKKAA 1414

Query: 420  NGKLELERMKKQHDEV--MEELQIALDQKSLLES--QIAESDQTAKELEQKIISAVELLQ 475
              K + +  KK+ +E    +E +   ++    +   + AE  + A+E ++K   A +  +
Sbjct: 1415 AAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE 1474

Query: 476  NYKKEQ-----DELQMERDKAVKEAEELRKSRKE 504
              KK +     DE + + ++A K+A+E +K+ + 
Sbjct: 1475 AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.4 bits (99), Expect = 0.001
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 17/156 (10%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF---EEALA 419
            A+   +A+ ++++A EEA ++    K A E+  + KA E+  AEE K+  E    EEA  
Sbjct: 1479 AEEAKKADEAKKKA-EEAKKKADEAKKAAEA--KKKADEAKKAEEAKKADEAKKAEEAKK 1535

Query: 420  NGKLELERMKKQHDEV--MEELQIALDQKSLLESQIAESDQT--------AKELEQKIIS 469
              + +    KK+ DE+   EEL+ A ++K   E++ AE D+         AK+ E+  I 
Sbjct: 1536 ADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595

Query: 470  AV-ELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
             V +L +  KK + E   + ++A  +AEEL+K+ +E
Sbjct: 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE 1631

Length = 2084

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 42.7 bits (101), Expect = 0.001
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE-----SLYAEELKRRKEF 414
           ++  + +AEAE +  E  E  + + K E  A+        +E        A   +R +  
Sbjct: 771 EEAEEELAEAE-AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESL 829

Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
           E  +A  +  LE +++Q +E+ E+++    +   LE  I E +   + L  +  S  E L
Sbjct: 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
              + E +EL  E  +   +  ELR+  +E 
Sbjct: 890 ALLRSELEELSEELRELESKRSELRRELEEL 920

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 26/154 (16%)

Query: 368 EAENSRREA------FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
           EAE  ++E        EE +RR  A+K+  E    A        E+LK+ +E  + L   
Sbjct: 2   EAEREQQELEERMEQMEEDMRR--AQKELEEYEETAL----ELEEKLKQEEEEAQLLEKK 55

Query: 422 KLELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
             ELE   ++    +EE   A + ++  LE+++ E+     +LE+      E  +   ++
Sbjct: 56  ADELEEENRR----LEEEAAASEEERERLEAEVDEATAEVAKLEE----EREKKEAETRQ 107

Query: 481 -QDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
            Q EL+  ++   +  +EL     EA+++   P 
Sbjct: 108 LQQELREAQEAHERARQEL----LEAAAAPTAPP 137

This family of proteins contain a band 4.1 domain (pfam00373), at their amino terminus. This family represents the rest of these proteins. Length = 244

>gnl|CDD|109486 pfam00430, ATP-synt_B, ATP synthase B/B' CF(0)

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 22/112 (19%)

Query: 360 DQLAQAMAEAENSRREA------FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
           +++A  + EAE   ++A       E+ L   +A  +A E I  AK      A++LK    
Sbjct: 33  EKIANNIKEAEERLKQAAALLAEAEQQLA--QARAEASEIINNAKKE----AQKLK---- 82

Query: 414 FEEALANGKLELERMKKQ-HDEVMEELQIALDQKSLLESQIAE-SDQTAKEL 463
            EE LA  + + ER+ +    E+ +E + AL +   L  Q+A  + Q A++L
Sbjct: 83  -EEILAEAQKDAERLLESARAEIEQEKEQALAE---LRQQVAALAVQIAEKL 130

Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006. Length = 132

>gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning]

 Score = 42.0 bits (99), Expect = 0.001
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 356 DNLYDQLAQAMAEAEN---SRREAFEEALRRGKAEKDAI-ESIRRAKASESLYAEELKRR 411
           ++LYD L +   EA+N          + L + K   + + E I R K S  L   EL   
Sbjct: 291 ESLYDLLERE-VEAKNVVEENLPILPDYLEKAKENNEHLKEEIERVKESYRLAETELGSV 349

Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
           ++FE+       EL+ ++   DE++E ++      S L+  + E ++   ++E +     
Sbjct: 350 RKFEK-------ELKELESVLDEILENIEAQEVAYSELQDNLEEIEKALTDIEDEQEKVQ 402

Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFF 515
           E L + +K++ E +   ++   +  E+ K   E S+   +P+ F
Sbjct: 403 EHLTSLRKDELEARENLERLKSKLHEI-KRYMEKSNLPGLPETF 445

Length = 570

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 367 AEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE 426
                   E   E L+  + + D  E ++ ++       +ELK+ KE  E L     ELE
Sbjct: 290 KLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELE 349

Query: 427 RMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQM 486
             ++  +E  E+L      +  LE    E     K   +++ SA +L +   + ++E + 
Sbjct: 350 IKREAEEEEEEQL---EKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEK 406

Query: 487 ERDKAVKEAEELRKSRKEA 505
           E    ++ +E+     KE 
Sbjct: 407 EAKLLLELSEQEEDLLKEE 425

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)

Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAI----ESIRRAKASESLYAEELKRRK-- 412
            D L + + E   ++ E  E  L +  AE        ES    +A E    EELK++   
Sbjct: 273 LDSLREQLEEESEAKAEL-ERQLSKANAEIQQWRSKFESEGALRAEE---LEELKKKLNQ 328

Query: 413 ---EFEEAL--ANGKL-ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQK 466
              E EEA   AN K   LE+ K +    +E+LQI L++          ++  A ELE+K
Sbjct: 329 KISELEEAAEAANAKCDSLEKTKSRLQSELEDLQIELER----------ANAAASELEKK 378

Query: 467 IISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
             +  ++L  +K++ DELQ E D A +EA  L
Sbjct: 379 QKNFDKILAEWKRKVDELQAELDTAQREARNL 410

The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Length = 859

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 17/135 (12%)

Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           LV ++   G L   +S   N P    +   R A E+   L  LH      IV  DL P N
Sbjct: 62  LVLQHAEGGKLWSHISKFLNIPEECVK---RWAAEMVVALDALHR---EGIVCRDLNPNN 115

Query: 658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSD 717
           ILLD     +L+ F        +E+  +    C     +    Y  PE     E T   D
Sbjct: 116 ILLDDRGHIQLTYFS-----RWSEVEDS----CDGEAVENM--YCAPEVGGISEETEACD 164

Query: 718 VYSFGIILLRLLTGR 732
            +S G IL  LLTG+
Sbjct: 165 WWSLGAILFELLTGK 179

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDA---IESIR-RAKASESLYAEELKRRKEFE 415
           ++L   + + E    E  EE L R +   +A   IE +  R +  E L AE  +  +E  
Sbjct: 478 EELEAELEDLE-EEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKR 536

Query: 416 EALAN-----GKLELERMKKQHD--EVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
           E          +LE E  +K+    E  EE + A ++ + L S++AE  +  + LE +I 
Sbjct: 537 ERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIR 595

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSR 502
           + +  + + + E + L+ E+ +A+ E  + R+ R
Sbjct: 596 TLLAAIADAEDEIERLR-EKREALAELNDERRER 628

Length = 880

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 14/94 (14%)

Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE-FEE 416
           L D   +A AE EN RR A E+     KA K AIES          +AE L   K+  E 
Sbjct: 51  LQDSFLRAKAETENVRRRAQEDV---AKAHKFAIES----------FAESLLPVKDSLEA 97

Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLE 450
           ALA+   +LE++++  +  +++L  A ++  ++E
Sbjct: 98  ALADESGDLEKLREGVELTLKQLTSAFEKGRVVE 131

Length = 185

>gnl|CDD|237178 PRK12705, PRK12705, hypothetical protein; Provisional

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)

Query: 362 LAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEE-LKRRKEFEEALAN 420
           L +A  EAE     A  EA      E++      R +  E    EE L +++E  +A A 
Sbjct: 39  LQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDARAE 98

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
              +L+ ++ Q +E  + L     +   LE Q+         L  +      LL+    E
Sbjct: 99  ---KLDNLENQLEEREKALSARELELEELEKQLDNELYRVAGLTPEQARK-LLLKLLDAE 154

Query: 481 QDELQMERDKAVKE 494
            +E + +R K ++E
Sbjct: 155 LEEEKAQRVKKIEE 168

Length = 508

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           LV EYL  G ++  L           +  ++  +E+   L +LH    H I+H DLKP N
Sbjct: 81  LVMEYLIGGDVKSLLHIYGY---FDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDN 134

Query: 658 ILLDANFVSKLSDFGISR 675
           +L+      KL+DFG+S+
Sbjct: 135 MLISNEGHIKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 26/163 (15%)

Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELK------- 409
           +L  +L+ +      +     EE + R +A    IE        E  Y E+         
Sbjct: 783 DLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842

Query: 410 -----RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELE 464
                + K  E+ + N   + E +    +E +EEL+ AL     LES++        +L+
Sbjct: 843 IDLKEQIKSIEKEIENLNGKKEEL----EEELEELEAALRD---LESRL-------GDLK 888

Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
           ++       L+  +++ +EL+ + +K  K   EL+   +    
Sbjct: 889 KERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE 931

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 3/143 (2%)

Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
            + L   + E +    E  +E     +  +     I   K       EEL+R     E L
Sbjct: 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL---SEEL 422

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
           A+    +  ++ + +E+ EE +    +    E ++ +      + EQ++    E     +
Sbjct: 423 ADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482

Query: 479 KEQDELQMERDKAVKEAEELRKS 501
           KE  +LQ E  +A  +A    + 
Sbjct: 483 KELSKLQRELAEAEAQARASEER 505

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 40.9 bits (96), Expect = 0.003
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 9/157 (5%)

Query: 357 NLYDQLAQAMAEAEN---SRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
                L + + E      S  E  E+   + +  +  +E +   K    L     +R KE
Sbjct: 308 EGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEK--NELAKLLEERLKE 365

Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
            EE L   + ELE+  ++  ++ E +Q   ++ + L + + E  +  +ELE++    +E 
Sbjct: 366 LEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKE----LEE 421

Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH 510
           L+   +E +E   + ++ + + E       E + +  
Sbjct: 422 LERELEELEEEIKKLEEQINQLESKELMIAELAGAGE 458

Length = 908

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 41.3 bits (96), Expect = 0.003
 Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
            A    +AE  ++   +EA ++ +  K A E+ ++A+ ++   A+  K++ E  +  A   
Sbjct: 1292 ADEAKKAEEKKK--ADEAKKKAEEAKKADEAKKKAEEAKK-KADAAKKKAEEAKKAAEAA 1348

Query: 423  LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
                       E  EE   A ++K     + A++ +   E ++K   A +  +  KK+ D
Sbjct: 1349 KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD 1408

Query: 483  ELQMERDKAVKEAEELRKSRKE 504
            EL+ +   A K+A+E +K  +E
Sbjct: 1409 ELK-KAAAAKKKADEAKKKAEE 1429

Length = 2084

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 18/167 (10%)

Query: 359 YDQLAQAMAEAENSRREAFEE--ALRRGKAEKDA-IESIRRAKAS------------ESL 403
            ++L + + E +   +EA EE   L     E +  +E +R   +              +L
Sbjct: 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293

Query: 404 YAE--ELKRRKEF-EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
             E   L+++K+   E LAN + +LE ++ Q +E+  +L    ++ + LE ++ E  +  
Sbjct: 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEEL 353

Query: 461 KELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
           + LE ++      L+  +   +EL+ + +    +  +L       ++
Sbjct: 354 ESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNN 400

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed

 Score = 41.0 bits (97), Expect = 0.003
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 39/131 (29%)

Query: 376 AFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEV 435
           AFE A R G  E      I  AK    L  E+              K +L  +       
Sbjct: 490 AFEIAKRLGLPE----NIIEEAKK---LIGED--------------KEKLNEL------- 521

Query: 436 MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEA 495
                IA    SL E +  E +Q A+E E  +  A +L +  ++++++LQ E DK ++EA
Sbjct: 522 -----IA----SLEELER-ELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA 571

Query: 496 E-ELRKSRKEA 505
           E E +++ KEA
Sbjct: 572 EKEAQQAIKEA 582

Length = 782

>gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]

 Score = 40.8 bits (95), Expect = 0.003
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 2/133 (1%)

Query: 377 FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
               LR G  + D I    RA  +E   A+  KR  E E   A  +L+  R +++   V 
Sbjct: 65  LNRNLRSGVFQLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQERE--AVR 122

Query: 437 EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAE 496
           +EL  A    +  + ++A   + A++L+ ++ +  E  +  + +   LQ  + +    A 
Sbjct: 123 QELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASAT 182

Query: 497 ELRKSRKEASSSS 509
           +L+    +    S
Sbjct: 183 QLKSQVLDLKLRS 195

Length = 499

>gnl|CDD|221389 pfam12037, DUF3523, Domain of unknown function (DUF3523)

 Score = 40.1 bits (94), Expect = 0.003
 Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 13/131 (9%)

Query: 379 EALRRG-KAEKDAIESIRRA-KASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
            AL RG KA ++ +ES   A KA E    +E  R+ E E  +   + +  + K +   V 
Sbjct: 32  TALERGAKALRE-LESSPHAKKAFELSKMQEKTRQAELEAKIKEYEAQQAQAKLERARVE 90

Query: 437 EELQIALDQKSLLESQIAESDQTAK---ELEQKIISAVELLQNYKKEQDELQMERDKAVK 493
            E     +++  L+ Q  +  Q A+   EL +K     EL Q  ++ ++ L+M+ +  ++
Sbjct: 91  AE-----ERRKTLQEQTQQEQQRAQYQDELARKRYQK-ELEQQRRQNEELLKMQEESVLR 144

Query: 494 EAEELRKSRKE 504
           + E +R++ +E
Sbjct: 145 Q-EAMRRATEE 154

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 257 to 277 amino acids in length. This domain is found associated with pfam00004. This domain has a conserved LER sequence motif. Length = 276

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 40.9 bits (95), Expect = 0.003
 Identities = 69/310 (22%), Positives = 129/310 (41%), Gaps = 59/310 (19%)

Query: 535 KIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
           KIG G +G ++  L++H +       K +    L+    S+   E++++ +++H N+V  
Sbjct: 20  KIGNGRFGEVF--LVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRY 77

Query: 589 VG-----ACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +      A  +++ L+ E+   G L   +  C      +     + I  +L   L + H+
Sbjct: 78  IDRFLNKANQKLYILM-EFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN 136

Query: 643 CKP----HSIVHGDLKPANILLDANF-----------------VSKLSDFGISRFLSQNE 681
            K       ++H DLKP NI L                     ++K+ DFG+S+ +    
Sbjct: 137 LKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES 196

Query: 682 ISSNNTTLCCRTDPKGTFAYMDPEFL--ASGELTPKSDVYSFGIILLRLLTGRPALGITK 739
           ++ +    C      GT  Y  PE L   +     KSD+++ G I+  L +G+      K
Sbjct: 197 MAHS----CV-----GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF--HK 245

Query: 740 EVQYALDTGKLKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPE----LGKDVWRV 794
              ++    +LK   D P+ G     ++++L  L      +S K RP     LG  + + 
Sbjct: 246 ANNFSQLISELKRGPDLPIKG-----KSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300

Query: 795 LEPMRASCGG 804
           + P   + GG
Sbjct: 301 VGPPVGAAGG 310

Length = 1021

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 40.9 bits (95), Expect = 0.004
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 368  EAENSRREAFEEALRRGKAEKDAIESIRRA--KASESLYAEELKRRKEFEEALANGKLEL 425
            EA+ +  E   E +R+ +  + A  + R+A  KA E+  A+ELK+ +E ++A    K E 
Sbjct: 1241 EAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300

Query: 426  ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485
            ++   +  +  EE + A + K   E    ++D   K+ E+   +A       +   DE +
Sbjct: 1301 KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE 1360

Query: 486  MERDKAVKEAEELRKS 501
               +K   EA E +K 
Sbjct: 1361 AAEEK--AEAAEKKKE 1374

Length = 2084

>gnl|CDD|226513 COG4026, COG4026, Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]

 Score = 39.9 bits (93), Expect = 0.004
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQ---KI 467
           RKE + AL    L+  +   ++ ++ E+     + K  LE    E ++  KELE+   + 
Sbjct: 109 RKELKNALVRAGLKTLQRVPEYMDLKEDY---EELKEKLEELQKEKEELLKELEELEAEY 165

Query: 468 ISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGAT 527
               E L+  + E   L+    K   E  +L+K   E      +P+   +   S++   T
Sbjct: 166 EEVQERLKRLEVENSRLEEMLKKLPGEVYDLKKRWDELEPGVELPE---EELISDLVKET 222

Query: 528 HNFDPSLKIGEG 539
            N  P    G+G
Sbjct: 223 LNLAPKDIEGQG 234

Length = 290

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 40.4 bits (94), Expect = 0.004
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     I+H DLKP+NI++ ++   K+ DFG++R    N + +             T 
Sbjct: 139 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV---------TR 186

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
            Y  PE +         D++S G I+  L+ G
Sbjct: 187 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 40.0 bits (93), Expect = 0.004
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 32/210 (15%)

Query: 536 IGEGGYGSI---YKGLLRHMQVAIKML-HP-HSLQGPSEFQQEIDILSKIRHPNLVTLV- 589
           +G G YGS+   Y   LR  +VA+K L  P  SL       +E+ +L  ++H N++ L+ 
Sbjct: 23  VGSGAYGSVCSAYDTRLRQ-KVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLD 81

Query: 590 ----GACPEVWTLVY--EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                   E +  VY    L    L + + C+     LS +    +  +L   L ++HS 
Sbjct: 82  VFTPATSIENFNEVYLVTNLMGADLNNIVKCQK----LSDEHVQFLIYQLLRGLKYIHSA 137

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I+H DLKP+N+ ++ +   ++ DFG++R  + +E+          T    T  Y  
Sbjct: 138 ---GIIHRDLKPSNVAVNEDCELRILDFGLAR-QADDEM----------TGYVATRWYRA 183

Query: 704 PEFLASG-ELTPKSDVYSFGIILLRLLTGR 732
           PE + +        D++S G I+  LL G+
Sbjct: 184 PEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|225638 COG3096, MukB, Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning]

 Score = 40.6 bits (95), Expect = 0.004
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 28/176 (15%)

Query: 327  IRTEGV--STLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRG 384
            I+  G   S L P    LQS P            ++QL +  A+A+  +R+A ++A    
Sbjct: 912  IQQHGNTLSKLEPIASVLQSDPEQ----------FEQLKEDYAQAQQMQRQARQQAF--- 958

Query: 385  KAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALD 444
             A  + ++  RRA  S S  AE L    +  E L   +  LE+ + +     E+L+    
Sbjct: 959  -ALTEVVQ--RRAHFSYSDSAEMLSENSDLNEKL---RQRLEQAEAERTRAREQLR---- 1008

Query: 445  QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
            Q    ++Q+++ +Q    L+    +  ELL   ++E  ++ +  D   +E   +R+
Sbjct: 1009 QH---QAQLSQYNQVLASLKSSYDTKKELLNELQQELQDIGVRADSGAEERARIRR 1061

Length = 1480

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	888
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.98
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.98
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.98
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.98
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.98
PHA03210	501	serine/threonine kinase US3; Provisional	99.98
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.98
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.98
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.98
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.98
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.98
KOG0584	632	consensus Serine/threonine protein kinase [General	99.98
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.98
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.93
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.89
PRK09188	365	serine/threonine protein kinase; Provisional	99.88
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.86
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.86
cd01989	146	STK_N The N-terminal domain of Eukaryotic Serine T	99.85
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.83
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.81
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
PRK12274	218	serine/threonine protein kinase; Provisional	99.79
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.78
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.76
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.73
PRK10345	210	hypothetical protein; Provisional	99.72
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.71
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.71
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.71
smart00090	237	RIO RIO-like kinase.	99.68
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.68
PRK14879	211	serine/threonine protein kinase; Provisional	99.67
PF04564	73	U-box: U-box domain; InterPro: IPR003613 Quality c	99.67
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.63
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.63
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.56
PRK15005	144	universal stress protein F; Provisional	99.54
PRK15456	142	universal stress protein UspG; Provisional	99.53
cd01987	124	USP_OKCHK USP domain is located between the N-term	99.51
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.5
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.5
PRK09982	142	universal stress protein UspD; Provisional	99.47
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.45
PRK15118	144	universal stress global response regulator UspA; P	99.43
cd01988	132	Na_H_Antiporter_C The C-terminal domain of a subfa	99.41
PF00582	140	Usp: Universal stress protein family; InterPro: IP	99.39
PRK10116	142	universal stress protein UspC; Provisional	99.32
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.29
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.29
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.28
PRK11175	305	universal stress protein UspE; Provisional	99.26
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.18
cd00293	130	USP_Like Usp: Universal stress protein family. The	99.14
smart00504	63	Ubox Modified RING finger domain. Modified RING fi	99.13
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.09
PRK11175	305	universal stress protein UspE; Provisional	99.08
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.08
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.07
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.05
KOG1243	690	consensus Protein kinase [General function predict	99.04
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.04
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.98
KOG3087	229	consensus Serine/threonine protein kinase [General	98.95
COG4248	637	Uncharacterized protein with protein kinase and he	98.95
PRK12652	357	putative monovalent cation/H+ antiporter subunit E	98.9
KOG4642	284	consensus Chaperone-dependent E3 ubiquitin protein	98.86
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.82
COG0589	154	UspA Universal stress protein UspA and related nuc	98.78
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.68
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.67
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.48
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.47
PRK09902	216	hypothetical protein; Provisional	98.45
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.4
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.2
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.13
PF01636	239	APH: Phosphotransferase enzyme family This family	98.12
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.11
PRK10490	895	sensor protein KdpD; Provisional	97.98
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.96
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.95
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.91
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.9
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.82
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.8
KOG2042	943	consensus Ubiquitin fusion degradation protein-2 [	97.78
PLN02876	822	acyl-CoA dehydrogenase	97.76
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.76
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.65
PRK05231	319	homoserine kinase; Provisional	97.59
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.54
PRK10593	297	hypothetical protein; Provisional	97.51
COG5113	929	UFD2 Ubiquitin fusion degradation protein 2 [Postt	97.5
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.47
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.46
COG2205	890	KdpD Osmosensitive K+ channel histidine kinase [Si	97.4
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.38
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.31
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.15
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.13
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.92
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.91
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.66

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-46  Score=416.05  Aligned_cols=276  Identities=46%  Similarity=0.795  Sum_probs=233.3

Q ss_pred             cCCCCChhhhhhhcCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc
Q 002719          514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC  592 (888)
Q Consensus       514 ~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~  592 (888)
                      ....|++.|+..+|++|...+.||+||||.||+|...+ +.||||.+.........+|.+|+.+|.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56789999999999999999999999999999999987 88999988766543144599999999999999999999999


Q ss_pred             C--C-ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeee
Q 002719          593 P--E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS  669 (888)
Q Consensus       593 ~--~-~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~  669 (888)
                      .  + ..+|||||+++|+|.++|+..... +++|..+++|+.++|.||.|||...+.+||||||||+|||||.++.+||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            4  3 389999999999999999765444 89999999999999999999999765689999999999999999999999


Q ss_pred             cccccccccc-ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch---------
Q 002719          670 DFGISRFLSQ-NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK---------  739 (888)
Q Consensus       670 DFGla~~~~~-~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~---------  739 (888)
                      |||+|+.... .....        +...||.+|+|||++..+..+.|+|||||||+|+||+||+++.+...         
T Consensus       220 DFGLa~~~~~~~~~~~--------~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~  291 (361)
T KOG1187|consen  220 DFGLAKLGPEGDTSVS--------TTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE  291 (361)
T ss_pred             CccCcccCCcccccee--------eecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence            9999966543 11100        00169999999999999999999999999999999999998886431         


Q ss_pred             HHHHHHhhcccccccCCCC--CCCCh-hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          740 EVQYALDTGKLKNLLDPLA--GDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       740 ~~~~~~~~~~~~~~ld~~~--~~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      +....+..+.+..++|+..  ..++. .....+..++.+|++.+|.+||+| .+|.++|+.+.
T Consensus       292 w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m-~~Vv~~L~~~~  353 (361)
T KOG1187|consen  292 WAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTM-SQVVKELEGIL  353 (361)
T ss_pred             HHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCH-HHHHHHHHhhc
Confidence            2234556668889999875  35553 466779999999999999999999 56677776543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4e-44  Score=398.48  Aligned_cols=257  Identities=35%  Similarity=0.552  Sum_probs=212.7

Q ss_pred             CCCccceeeecCceEEEEEEECCeE-EEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccCC---ceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE---VWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~~~-VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~~---~~~LV~Ey  602 (888)
                      .+.....||.|+||+||+|.++++. ||||++.......  ...|.+|+.+|.+++|||||+++|+|.+   ..+|||||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            3444556999999999999999988 9999998754333  4489999999999999999999999954   47899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eeeccccCCcEEEcCCC-ceeeeccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANILLDANF-VSKLSDFGISRFLSQN  680 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~g-iiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~  680 (888)
                      +++|+|..+|... ....+++..++.|+.||+.||.|||+   ++ ||||||||+|||++.++ ++||+|||+++.....
T Consensus       122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            9999999999754 45679999999999999999999999   66 99999999999999998 9999999999876543


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLA--SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~--~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ..        ..+...||+.|||||++.  ...|+.|+|||||||+||||+||+.||........+.... .    ....
T Consensus       198 ~~--------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~----~~~R  264 (362)
T KOG0192|consen  198 KT--------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-V----GGLR  264 (362)
T ss_pred             cc--------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-h----cCCC
Confidence            21        123356999999999999  5689999999999999999999999998776533222211 1    1122


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccccCC
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCG  803 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~~~  803 (888)
                      ...|..++..+..|+.+||..||..||++ .++...|+.+.....
T Consensus       265 p~~p~~~~~~l~~l~~~CW~~dp~~RP~f-~ei~~~l~~~~~~~~  308 (362)
T KOG0192|consen  265 PPIPKECPPHLSSLMERCWLVDPSRRPSF-LEIVSRLESIMSHIS  308 (362)
T ss_pred             CCCCccCCHHHHHHHHHhCCCCCCcCCCH-HHHHHHHHHHHHhhc
Confidence            23344466889999999999999999999 788888988876543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-43  Score=375.61  Aligned_cols=246  Identities=31%  Similarity=0.490  Sum_probs=203.2

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ..+|...+.||.|+||+||+|.++  +..||||.+.+...  ...+-+..|+.+|+.++|||||.|++++  ++..||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            457888899999999999999886  57899999987642  3345678999999999999999999998  56899999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC------Cceeeeccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN------FVSKLSDFGIS  674 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~------~~vKL~DFGla  674 (888)
                      |||.||+|.++|..+   ..+++.++..++.||+.||++||+   ++||||||||.||||+..      -.+||+|||+|
T Consensus        89 EyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            999999999999544   469999999999999999999999   999999999999999764      46899999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      +.+......         ....|++.|||||++..++|+.|+|+||+|+|||+|++|++||......+......+-..++
T Consensus       163 R~L~~~~~a---------~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~  233 (429)
T KOG0595|consen  163 RFLQPGSMA---------ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV  233 (429)
T ss_pred             hhCCchhHH---------HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc
Confidence            988754321         23459999999999999999999999999999999999999998766555444332222222


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .    ..+......+.+|+...+..+|.+|-++...+
T Consensus       234 ~----~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  234 P----VLPAELSNPLRELLISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             C----chhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence            2    22333445577899999999999998885444

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.2e-43  Score=390.53  Aligned_cols=243  Identities=26%  Similarity=0.394  Sum_probs=206.1

Q ss_pred             CCCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~--~~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~  600 (888)
                      ..|...+.||+|||+.||.+.+  .+..||+|++.+...   ...+.+.+||+|.+.|.|||||+++++|++  +.|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5699999999999999999987  378899999987533   335679999999999999999999999964  799999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      |+|..++|..++.   ..+++++.+++.++.||+.||.|||+   ++|||||||..||||+++.++||+|||||..+..+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999999994   55789999999999999999999999   89999999999999999999999999999988754


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      +.  ...+      ..|||.|+|||++....++..+||||+|||||-||+|+|||....-... ...-+..+      -.
T Consensus       172 ~E--rk~T------lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket-y~~Ik~~~------Y~  236 (592)
T KOG0575|consen  172 GE--RKKT------LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET-YNKIKLNE------YS  236 (592)
T ss_pred             cc--ccce------ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH-HHHHHhcC------cc
Confidence            32  2223      3499999999999999999999999999999999999999976543222 22211111      22


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .|...+.+..+||.++|+.||.+||++.+++
T Consensus       237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL  267 (592)
T KOG0575|consen  237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVL  267 (592)
T ss_pred             cccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence            3556678899999999999999999995444

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-43  Score=362.30  Aligned_cols=252  Identities=28%  Similarity=0.414  Sum_probs=206.7

Q ss_pred             CCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeec-ccC---CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVG-ACP---EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~--~~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g-~~~---~~~~LV~  600 (888)
                      +|.+.++||+|.||+||++..  ++..||.|.++-....  ....+..|+.+|++|+|||||++++ .|.   +..+|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            588899999999999999965  4788999988744322  2456889999999999999999999 442   2478999


Q ss_pred             EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      |||.+|+|...+... .....+++..+|+++.|++.||..+|+.-++ -|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence            999999999998653 4566799999999999999999999994433 38999999999999999999999999999887


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDP  756 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--~~~~~~~~ld~  756 (888)
                      .....        ..+.+|||.||+||.+...+|+.+|||||+||++|||+.-++||.+.+-.....  ..+.+      
T Consensus       180 s~~tf--------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~------  245 (375)
T KOG0591|consen  180 SKTTF--------AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY------  245 (375)
T ss_pred             chhHH--------HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC------
Confidence            65432        245679999999999999999999999999999999999999998875443322  22211      


Q ss_pred             CCCCCC-hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          757 LAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       757 ~~~~~p-~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                        +..| ..++..+..||..|+..||..||+....|.++..
T Consensus       246 --~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  246 --PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             --CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence              1123 6678999999999999999999995344444433

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.1e-41  Score=373.27  Aligned_cols=250  Identities=24%  Similarity=0.309  Sum_probs=201.8

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      .++|+.+..||+|+||.||++.-+  |..+|+|++++....   ..+++..|-++|...++|+||+||..|+  +++|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            457999999999999999999765  678999999986443   3567889999999999999999999995  589999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||++||++..+|.   +...|++..+..++.+++.|+..||+   +|+|||||||+|+|||..|++||+|||||..+..
T Consensus       220 MEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~  293 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK  293 (550)
T ss_pred             EEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhh
Confidence            99999999999994   44669999999999999999999999   9999999999999999999999999999965432


Q ss_pred             ccccC---------------CCccc------------------------cccCCCCCCcccCChhhhccCCCCchhhHHH
Q 002719          680 NEISS---------------NNTTL------------------------CCRTDPKGTFAYMDPEFLASGELTPKSDVYS  720 (888)
Q Consensus       680 ~~~~~---------------~~~~~------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwS  720 (888)
                      .....               .....                        ......+|||.|||||++.+..|+..+|+||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS  373 (550)
T KOG0605|consen  294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS  373 (550)
T ss_pred             hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence            11000               00000                        0112347999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          721 FGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       721 lGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ||||+||||.|.|||.............++...+....   ....+.+..+||.+||. ||.+|--
T Consensus       374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~---~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE---EVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC---cCcccHHHHHHHHHHhc-CHHHhcC
Confidence            99999999999999987766554443333333222111   11234789999999999 9999987

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-42  Score=369.90  Aligned_cols=236  Identities=26%  Similarity=0.378  Sum_probs=197.2

Q ss_pred             CccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CC-ceEEEEEecC
Q 002719          531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PE-VWTLVYEYLP  604 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~-~~~LV~Ey~~  604 (888)
                      +....||+|..|+||++.++  ++.+|+|++..... ...+++.+|+++++.++|||||.+||+|  +. ..+|+||||+
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            44567999999999999987  67899999955432 2356789999999999999999999998  33 4899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|||++++..   .+.+++...-+|+.++++||.|||..  ++||||||||+|||++..|.+||||||.++.+....   
T Consensus       162 gGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~---  233 (364)
T KOG0581|consen  162 GGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI---  233 (364)
T ss_pred             CCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhh---
Confidence            9999999943   35699999999999999999999963  679999999999999999999999999998765431   


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHhhcccccccCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT-----KEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~-----~~~~~~~~~~~~~~~ld~~~~  759 (888)
                             ....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||...     .....      +..+.+...+
T Consensus       234 -------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------l~~Iv~~ppP  300 (364)
T KOG0581|consen  234 -------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------LCAIVDEPPP  300 (364)
T ss_pred             -------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH------HHHHhcCCCC
Confidence                   24567999999999999999999999999999999999999999764     22221      1222332333


Q ss_pred             CCChh-hHHHHHHHHHHHhhcCCCCCCCh
Q 002719          760 DWPFV-QAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       760 ~~p~~-~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..|.. .++++..++..||++||.+||+.
T Consensus       301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~  329 (364)
T KOG0581|consen  301 RLPEGEFSPEFRSFVSCCLRKDPSERPSA  329 (364)
T ss_pred             CCCcccCCHHHHHHHHHHhcCCcccCCCH
Confidence            34443 67899999999999999999998

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-42  Score=381.53  Aligned_cols=251  Identities=30%  Similarity=0.517  Sum_probs=212.0

Q ss_pred             CCCccceeeecCceEEEEEEECCe-EEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEEEecCC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPN  605 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~~-~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~Ey~~g  605 (888)
                      .+...+.||+|-||.||.|.+++. .||+|.++... ...+.|.+|+++|++|+|+|||+|+|+|..  ..|||||||+.
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK  285 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence            455678899999999999999985 89999998764 345789999999999999999999999943  58999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.++|.. ..+..+...+.+.++.|||+|++||++   +++|||||...||||+++..+||+|||+|+.+.++.....
T Consensus       286 GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~  361 (468)
T KOG0197|consen  286 GSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS  361 (468)
T ss_pred             CcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence            999999965 345678999999999999999999999   8999999999999999999999999999996655443221


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p  762 (888)
                             ....-...|.|||.+..+.++.|||||||||+||||+| |+.||......+  ..++.|.        .-..|
T Consensus       362 -------~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy--------Rlp~P  426 (468)
T KOG0197|consen  362 -------EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY--------RLPRP  426 (468)
T ss_pred             -------CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC--------cCCCC
Confidence                   22334678999999999999999999999999999999 999987665433  3333332        22346


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      ..+|..+.+|+..||+.+|++|||+ +.+...|+.+..
T Consensus       427 ~~CP~~vY~lM~~CW~~~P~~RPtF-~~L~~~l~~~~~  463 (468)
T KOG0197|consen  427 EGCPDEVYELMKSCWHEDPEDRPTF-ETLREVLEDFFT  463 (468)
T ss_pred             CCCCHHHHHHHHHHhhCCcccCCCH-HHHHHHHHHhhh
Confidence            6677999999999999999999999 778777777644

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-42  Score=370.71  Aligned_cols=242  Identities=28%  Similarity=0.434  Sum_probs=195.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-------hhHHHHHHHHHHhcCCCCeeeeeccc--CCce
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-------PSEFQQEIDILSKIRHPNLVTLVGAC--PEVW  596 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-------~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~  596 (888)
                      +.|.+.+.||+|+||.|-+|..+  ++.||||++++.....       ...+.+|+++|++|+|||||+++++|  ++..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            35788899999999999999776  6899999998753222       22367999999999999999999999  4578


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC---Cceeeecccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGI  673 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~---~~vKL~DFGl  673 (888)
                      ||||||+.||+|.+.+-   .++.+.+..-..++.|++.||.|||+   +||+||||||+|||+..+   ..+||+|||+
T Consensus       252 YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             EEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccch
Confidence            99999999999999984   34557788889999999999999999   999999999999999765   7899999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCC---CchhhHHHHHHHHHHHHhCCCCCCCchH---HHHHHhh
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL---TPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDT  747 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~---s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~  747 (888)
                      |+.......         .....||+.|.|||++.++.+   ..+.|+||+||+||-+|+|.+||.....   ....+..
T Consensus       326 AK~~g~~sf---------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~  396 (475)
T KOG0615|consen  326 AKVSGEGSF---------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK  396 (475)
T ss_pred             hhcccccee---------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence            998764321         233459999999999987653   3478999999999999999999964322   3333444


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      |++...  |  . .....+++..+||.+||..||++||++.+
T Consensus       397 G~y~f~--p--~-~w~~Iseea~dlI~~mL~VdP~~R~s~~e  433 (475)
T KOG0615|consen  397 GRYAFG--P--L-QWDRISEEALDLINWMLVVDPENRPSADE  433 (475)
T ss_pred             Cccccc--C--h-hhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence            433221  1  1 12345788999999999999999999943

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-42  Score=363.05  Aligned_cols=237  Identities=29%  Similarity=0.382  Sum_probs=200.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      .++|++.+.||+|+||.||.+..+  ++-+|+|++++....   ..+....|..||..++||.||+++..|+  +.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            458999999999999999999765  577999999876332   3467889999999999999999999995  579999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||+.||.|..+|.   ....|++..+..++.+|+.||.|||+   +|||||||||+|||||.+|+++|+|||+|+....
T Consensus       104 ld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            99999999999994   44669999999999999999999999   9999999999999999999999999999986544


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPL  757 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~ld~~  757 (888)
                      .+...        ....||+.|||||++.+..|+..+|+|||||++|+|++|.+||...+.....  +..++        
T Consensus       178 ~~~~t--------~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--------  241 (357)
T KOG0598|consen  178 DGDAT--------RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--------  241 (357)
T ss_pred             CCCcc--------ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc--------
Confidence            32211        2346999999999999999999999999999999999999999876643322  22222        


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCC
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RP  785 (888)
                      ....|...+....+|+.++|..||++|-
T Consensus       242 ~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  242 LPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            1223444668899999999999999995

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-41  Score=370.60  Aligned_cols=250  Identities=28%  Similarity=0.410  Sum_probs=209.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeecccCC--ceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~--~~~LV  599 (888)
                      ++|.+++.||.|+|++||+|+..  ++.+|||++.+.-   ....+-+..|-++|.+| .||.|++||..|.|  .+|+|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            46777888999999999999876  5789999987642   22345678899999999 89999999999954  78999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||+++|+|.++|.+.   +.|++...+.++.+|+.||.|||+   +|||||||||+|||||.+|++||+|||.|+.+..
T Consensus       153 Le~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             EEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            9999999999999544   569999999999999999999999   9999999999999999999999999999998876


Q ss_pred             cccc-----CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          680 NEIS-----SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       680 ~~~~-----~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      ....     ........+..++||..|.+||+|..+..++.+|+|+||||||+|+.|.|||...++-........+    
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l----  302 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL----  302 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh----
Confidence            5443     1111112235689999999999999999999999999999999999999999887765443333222    


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                         .-.||...++.+.+|+.+.|..||.+|++. ++|
T Consensus       303 ---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-~qI  335 (604)
T KOG0592|consen  303 ---DYEFPEGFPEDARDLIKKLLVRDPSDRLTS-QQI  335 (604)
T ss_pred             ---cccCCCCCCHHHHHHHHHHHccCccccccH-HHH
Confidence               234566666889999999999999999998 555

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.2e-40  Score=337.83  Aligned_cols=245  Identities=29%  Similarity=0.408  Sum_probs=196.8

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      .|+.+.++|+|+||.||++.++  |+-||||.+.......  .+-..+|+.+|++|+|||+|.|+.+|  ...++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            5778889999999999999876  5789999997653321  34578999999999999999999999  4579999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      |+..-|.+ |.  .....++...+..+++|++.|+.|+|+   +++|||||||+||||+.+|.+||||||+|+.+...+.
T Consensus        83 ~dhTvL~e-Le--~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd  156 (396)
T KOG0593|consen   83 CDHTVLHE-LE--RYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD  156 (396)
T ss_pred             cchHHHHH-HH--hccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence            98755544 43  233458889999999999999999999   8999999999999999999999999999998874321


Q ss_pred             cCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-ccccC-----
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-KNLLD-----  755 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~-~~~ld-----  755 (888)
                              ..|..+.|.+|.|||.+.+ .+|+..+||||+||++.||++|.|.|.+.++++......+. .++++     
T Consensus       157 --------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i  228 (396)
T KOG0593|consen  157 --------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI  228 (396)
T ss_pred             --------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence                    1245568999999999988 58999999999999999999999999988877655432211 11110     


Q ss_pred             -------------------CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          756 -------------------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       756 -------------------~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                                         ++...+|. .+.-+.+|+..||+.||.+|++-.
T Consensus       229 F~~N~~F~Gv~lP~~~~~epLe~k~p~-~s~~~ld~~k~cL~~dP~~R~sc~  279 (396)
T KOG0593|consen  229 FSSNPFFHGVRLPEPEHPEPLERKYPK-ISNVLLDLLKKCLKMDPDDRLSCE  279 (396)
T ss_pred             hccCCceeeeecCCCCCccchhhhccc-chHHHHHHHHHHhcCCccccccHH
Confidence                               11112222 234689999999999999999973

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-39  Score=350.56  Aligned_cols=249  Identities=30%  Similarity=0.500  Sum_probs=201.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CC--ceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PE--VWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~--~~~LV~E  601 (888)
                      .+|...+.||+|+||.||++...  +...|||.+........+.+.+|+.+|++|+|||||+++|..  .+  .++++||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            45777889999999999999887  488999988765333255689999999999999999999963  34  5889999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeeccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~  680 (888)
                      |+++|+|.+++.....  .|++..+..++.||+.||.|||+   +|||||||||+|||++. ++.+||+|||+++.....
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            9999999999964432  69999999999999999999999   99999999999999999 799999999999876531


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCC-chHHHHHHhhcccccccCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGI-TKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSlGviL~elltG~~Pf~~-~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ....     .......||+.|||||++..+. ..+++|||||||++.||+||.+||.. .......+..+.-.     ..
T Consensus       172 ~~~~-----~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-----~~  241 (313)
T KOG0198|consen  172 GTKS-----DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-----SL  241 (313)
T ss_pred             cccc-----cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-----CC
Confidence            1110     1123457999999999998643 34599999999999999999999976 23333333333222     12


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      +.+|...+....+++.+|+..+|.+||++ .+++
T Consensus       242 P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta-~eLL  274 (313)
T KOG0198|consen  242 PEIPDSLSDEAKDFLRKCFKRDPEKRPTA-EELL  274 (313)
T ss_pred             CCCCcccCHHHHHHHHHHhhcCcccCcCH-HHHh
Confidence            25667778899999999999999999999 5554

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.4e-39  Score=355.39  Aligned_cols=241  Identities=30%  Similarity=0.406  Sum_probs=203.6

Q ss_pred             CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      ++|.+...||+|+||.||+|+.++  ..||||.+.+.....  ...+.+|++|++.|+|||||.++++|+  ..+++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            467778889999999999997664  679999998754332  456889999999999999999999995  47899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+.| +|..+|.   ....++++.+..|+.++..||.|||+   ++|+|||+||.|||++.+|.+|++|||+|+.+....
T Consensus        82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9976 9999994   45669999999999999999999999   999999999999999999999999999999876532


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      .        ..+...|||.|||||.+.+++|+..+|.||+|||||||++|+|||....-...       ...+-.....|
T Consensus       155 ~--------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L-------v~~I~~d~v~~  219 (808)
T KOG0597|consen  155 S--------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL-------VKSILKDPVKP  219 (808)
T ss_pred             e--------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH-------HHHHhcCCCCC
Confidence            2        23567899999999999999999999999999999999999999954432221       11122223346


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      |...+..+.+|+...|.+||..|.++.+.
T Consensus       220 p~~~S~~f~nfl~gLL~kdP~~RltW~~L  248 (808)
T KOG0597|consen  220 PSTASSSFVNFLQGLLIKDPAQRLTWTDL  248 (808)
T ss_pred             cccccHHHHHHHHHHhhcChhhcccHHHH
Confidence            77888899999999999999999998543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-39  Score=333.35  Aligned_cols=234  Identities=26%  Similarity=0.382  Sum_probs=199.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      .+|+..+.||.|+||.|.++..+  +..+|+|++.+...-.   .++..+|..+|+.+.||+++++++.|.  ...||||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            36888999999999999999876  5779999998754332   456789999999999999999999885  4789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||.|..+|+   ....|++..++.++.||+.||.|||+   ++|++|||||+|||||.+|.+||+|||+|+.+...
T Consensus       124 eyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  124 EYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             eccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            9999999999995   34569999999999999999999999   89999999999999999999999999999987543


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .     .+      ..|||.|+|||++...+|+.++|+|||||++|||+.|.+||...+....--      .++. ..-.
T Consensus       198 T-----~T------lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~------KI~~-~~v~  259 (355)
T KOG0616|consen  198 T-----WT------LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE------KILE-GKVK  259 (355)
T ss_pred             E-----EE------ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH------HHHh-Cccc
Confidence            2     22      349999999999999999999999999999999999999998776643211      1111 1123


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCC
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RP  785 (888)
                      +|...+..+.+|+..+|+.|-.+|.
T Consensus       260 fP~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  260 FPSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             CCcccCHHHHHHHHHHHhhhhHhhh
Confidence            5677778999999999999999994

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.1e-38  Score=356.35  Aligned_cols=258  Identities=25%  Similarity=0.393  Sum_probs=201.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC---C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~---~  594 (888)
                      .++|.+.++||+|+||.||+|.+.       +..||+|++...... ....+.+|+.+|..+ +||||++++++|.   .
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            457899999999999999999752       256999998754322 235688999999999 8999999999874   3


Q ss_pred             ceEEEEEecCCCChhhhhhccCC---------------------------------------------------------
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------  617 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~---------------------------------------------------------  617 (888)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            57899999999999999864211                                                         


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCC
Q 002719          618 --SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP  695 (888)
Q Consensus       618 --~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~  695 (888)
                        ..++++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.........      .....
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~------~~~~~  236 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RKGSA  236 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchh------cccCC
Confidence              2358888999999999999999999   899999999999999999999999999998654321110      01223


Q ss_pred             CCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 002719          696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM  774 (888)
Q Consensus       696 ~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~  774 (888)
                      .+++.|+|||++.+..++.++|||||||+||||++ |.+||............  +.   .......+...+..+.+|+.
T Consensus       237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~l~~li~  311 (338)
T cd05102         237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR--LK---DGTRMRAPENATPEIYRIML  311 (338)
T ss_pred             CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH--Hh---cCCCCCCCCCCCHHHHHHHH
Confidence            46788999999999999999999999999999997 99999754321111110  00   00111123344578999999


Q ss_pred             HHhhcCCCCCCChHHHHHHHhcccc
Q 002719          775 RCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       775 ~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      +||+.||.+||++ .++++.|+.+.
T Consensus       312 ~cl~~dp~~RPs~-~el~~~l~~~~  335 (338)
T cd05102         312 ACWQGDPKERPTF-SALVEILGDLL  335 (338)
T ss_pred             HHccCChhhCcCH-HHHHHHHHHHH
Confidence            9999999999999 78888887653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4e-38  Score=343.43  Aligned_cols=245  Identities=22%  Similarity=0.326  Sum_probs=199.3

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeecccCC------ceEEEEEec
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------VWTLVYEYL  603 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------~~~LV~Ey~  603 (888)
                      ...||+|++|.||+|.++++.||||.+.......   .+.|.+|+.+|.+++||||++++|++.+      ..++||||+
T Consensus        25 ~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         25 SVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             CeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            3579999999999999999999999997654333   3567899999999999999999998743      578999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++..   ...+++.....++.+++.||.|||..  .+++||||||+|||++.++.+||+|||+++......  
T Consensus       105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--  177 (283)
T PHA02988        105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--  177 (283)
T ss_pred             CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence            99999999953   34688999999999999999999972  378899999999999999999999999988654321  


Q ss_pred             CCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                               ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||.............  ...   .....
T Consensus       178 ---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~--~~~---~~~~~  243 (283)
T PHA02988        178 ---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII--NKN---NSLKL  243 (283)
T ss_pred             ---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hcC---CCCCC
Confidence                     12347899999999976  689999999999999999999999998654332211110  000   01122


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      |...+..+.+|+.+||+.||.+||++ ++++..|+.+.
T Consensus       244 ~~~~~~~l~~li~~cl~~dp~~Rps~-~ell~~l~~~~  280 (283)
T PHA02988        244 PLDCPLEIKCIVEACTSHDSIKRPNI-KEILYNLSLYK  280 (283)
T ss_pred             CCcCcHHHHHHHHHHhcCCcccCcCH-HHHHHHHHHHH
Confidence            33456789999999999999999999 78888887654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-38  Score=348.78  Aligned_cols=249  Identities=29%  Similarity=0.402  Sum_probs=202.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeeccc----CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~----~~~~~LV  599 (888)
                      ..|+.+.+||+|.||.||+|+..  ++.||+|.+....  ........+||.||++|+||||++|.+..    ...+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            35777888999999999999876  5779999987664  33455678999999999999999999976    2368999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +|||+. +|..++.  .....|++.++..++.||+.||.|||.   +||+|||||.+|||||++|.+||+|||||+++..
T Consensus       197 FeYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             Eecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            999975 7888774  334579999999999999999999999   9999999999999999999999999999998765


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....       .|..+-|.+|.|||+|.+. .|+.+.|+||.||||.||++|+|.|.+..++...-..-++-.  .|..
T Consensus       271 ~~~~~-------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG--SP~e  341 (560)
T KOG0600|consen  271 SGSAP-------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG--SPTE  341 (560)
T ss_pred             CCCcc-------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC--CCCh
Confidence            43221       3566789999999999886 799999999999999999999999998887765543222111  1111


Q ss_pred             CCCC------------------------hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          759 GDWP------------------------FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       759 ~~~p------------------------~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..|+                        ...+....+|+..+|..||.+|.++.+.+
T Consensus       342 ~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL  398 (560)
T KOG0600|consen  342 DYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL  398 (560)
T ss_pred             hccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence            1111                        12245678999999999999999996554

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.5e-38  Score=321.50  Aligned_cols=246  Identities=26%  Similarity=0.406  Sum_probs=201.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|...++||+|.||.||+|.+.  ++.||||.++.....+  .....+|++.|+.++||||+.|+++|+  +...||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            5777889999999999999876  6889999998654332  346789999999999999999999995  578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      ++ .+|+..++  +....++...+..++.+++.||+|||.   +.|+||||||.|+|++.+|.+||+|||+|+.+.....
T Consensus        83 m~-tdLe~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   83 MP-TDLEVVIK--DKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             cc-ccHHHHhc--ccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            96 58999984  556789999999999999999999999   8999999999999999999999999999998876543


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..        +..+-|.+|.|||.+.+. .|+...|+||.|||+.||+-|.|.|.+.++.++....-  ..+-.|....|
T Consensus       157 ~~--------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If--~~LGTP~~~~W  226 (318)
T KOG0659|consen  157 IQ--------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIF--RALGTPTPDQW  226 (318)
T ss_pred             cc--------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHH--HHcCCCCcccC
Confidence            22        223579999999999875 79999999999999999999999999887766543321  11112222222


Q ss_pred             C-----------------------hhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          762 P-----------------------FVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       762 p-----------------------~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      |                       ...+....+|+..+|.+||.+|++..+.
T Consensus       227 P~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa  278 (318)
T KOG0659|consen  227 PEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA  278 (318)
T ss_pred             ccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH
Confidence            2                       1234567999999999999999999443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5e-39  Score=357.60  Aligned_cols=263  Identities=27%  Similarity=0.465  Sum_probs=210.0

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc-CCceE
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC-PEVWT  597 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~  597 (888)
                      .+++...+.+.+...||+|.||+||+|.|.| .||||+++......  .+.|++|+.+|++-+|-||+-++|+| .+.+.
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A  463 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA  463 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence            4455555566778899999999999999865 69999998765443  45799999999999999999999999 45668


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      ||.-+|.|-+|+.+|+..+  ..|...+.+.|+.||++|+.|||.   ++|||||||..||||.+++.|||+|||++..-
T Consensus       464 IiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk  538 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK  538 (678)
T ss_pred             eeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeee
Confidence            9999999999999996443  568889999999999999999999   99999999999999999999999999999754


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      ........      .....|...|||||+++.+   +|++.+|||||||++|||+||..||......+..+..|...-..
T Consensus       539 ~~w~g~~q------~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~p  612 (678)
T KOG0193|consen  539 TRWSGEQQ------LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMP  612 (678)
T ss_pred             eeeccccc------cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCc
Confidence            43211111      1234589999999999753   69999999999999999999999998655555444444433333


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      +...  ....++.++.+|+..||.+++++||.+. .|+..|+.+
T Consensus       613 d~s~--~~s~~pk~mk~Ll~~C~~~~~~eRP~F~-~il~~l~~l  653 (678)
T KOG0193|consen  613 DLSK--IRSNCPKAMKRLLSDCWKFDREERPLFP-QLLSKLEEL  653 (678)
T ss_pred             cchh--hhccCHHHHHHHHHHHHhcCcccCccHH-HHHHHHHHh
Confidence            3222  2234567999999999999999999995 555544443

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-38  Score=341.16  Aligned_cols=256  Identities=25%  Similarity=0.314  Sum_probs=207.8

Q ss_pred             hhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       524 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ....++|.+...||.|..++||+|++.  +..||||+++-....+ .+.+.+|+..|+.++||||++++..|  ...+++
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence            345568999999999999999999875  6889999998764443 57899999999999999999999988  568999


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||.||.+||+.+++...-. ..+++..+..|+.+++.||.|||.   +|.||||||+.||||+.+|.|||+|||.+..+.
T Consensus       102 VmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~  177 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLF  177 (516)
T ss_pred             eehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence            9999999999999965433 349999999999999999999999   999999999999999999999999999988776


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-  755 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld-  755 (888)
                      ..+   ....... +..+||++|||||++..  ..|+.|+|||||||+..||.+|..||.........+..-  ..-.. 
T Consensus       178 ~~G---~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL--qn~pp~  251 (516)
T KOG0582|consen  178 DSG---DRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL--QNDPPT  251 (516)
T ss_pred             ccC---ceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh--cCCCCC
Confidence            644   1111111 66789999999999654  479999999999999999999999998766655443321  11111 


Q ss_pred             ----CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          756 ----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       756 ----~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                          ....+.....+..+.+++..||++||.+||+..+
T Consensus       252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAsk  289 (516)
T KOG0582|consen  252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASK  289 (516)
T ss_pred             cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHH
Confidence                0111112233458999999999999999999843

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-38  Score=353.14  Aligned_cols=245  Identities=28%  Similarity=0.389  Sum_probs=201.7

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC----CC-CChhHHHHHHHHHHhcC-CCCeeeeeccc--CC
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----SL-QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PE  594 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~----~~-~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~  594 (888)
                      ...+.|.+.+.||+|+||.|+.|...  +..||||++...    .. ...+.+.+|+.+++.++ ||||++++.++  ..
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            34568999999999999999999775  688999987664    11 22456778999999999 99999999987  45


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeecccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGI  673 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFGl  673 (888)
                      ..++||||+.||+|.+++..   ..++.+..+..++.|++.|+.|||+   +||+||||||+|||++.+ +.+||+|||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence            79999999999999999953   4678899999999999999999999   999999999999999999 9999999999


Q ss_pred             ccccc-cccccCCCccccccCCCCCCcccCChhhhccCC-CC-chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc
Q 002719          674 SRFLS-QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL  750 (888)
Q Consensus       674 a~~~~-~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~  750 (888)
                      +.... ....         .....||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||...+........   
T Consensus       168 s~~~~~~~~~---------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki---  235 (370)
T KOG0583|consen  168 SAISPGEDGL---------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKI---  235 (370)
T ss_pred             ccccCCCCCc---------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHH---
Confidence            98774 2111         13345999999999999877 86 7899999999999999999999875443322221   


Q ss_pred             ccccCCCCCCCChhh-HHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          751 KNLLDPLAGDWPFVQ-AEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~-~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                          ....-.+|... +..+..|+.+||..||..|+++ .+++
T Consensus       236 ----~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~-~~i~  273 (370)
T KOG0583|consen  236 ----RKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITL-LEIL  273 (370)
T ss_pred             ----hcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence                11112234444 7889999999999999999999 5554

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-38  Score=352.50  Aligned_cols=243  Identities=26%  Similarity=0.400  Sum_probs=204.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .|....+||+|+.|.||.+...  +..||||.+........+-+.+|+.+|+.++|+|||.++..|  .+..++||||++
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            4556678999999999999765  577999999887776677899999999999999999999987  578999999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      ||+|.|.+.    ...+++.++..|+.+++.||+|||.   +||+|||||.+|||++.+|.+||+|||+|..+.....  
T Consensus       354 ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--  424 (550)
T KOG0578|consen  354 GGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--  424 (550)
T ss_pred             CCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence            999999984    2348999999999999999999999   9999999999999999999999999999998765543  


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            .+...+|||+|||||+.....|+++.||||||++++||+-|.|||-..+..........-.   . ..-..+..
T Consensus       425 ------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng---~-P~lk~~~k  494 (550)
T KOG0578|consen  425 ------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG---T-PKLKNPEK  494 (550)
T ss_pred             ------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC---C-CCcCCccc
Confidence                  2345679999999999999999999999999999999999999996555443322221110   1 11123456


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .+..|.+++.+||+.|+.+||++ .+|
T Consensus       495 lS~~~kdFL~~cL~~dv~~RasA-~eL  520 (550)
T KOG0578|consen  495 LSPELKDFLDRCLVVDVEQRASA-KEL  520 (550)
T ss_pred             cCHHHHHHHHHHhhcchhcCCCH-HHH
Confidence            67889999999999999999999 444

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-38  Score=369.42  Aligned_cols=255  Identities=29%  Similarity=0.530  Sum_probs=213.9

Q ss_pred             CCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT  597 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~  597 (888)
                      .+-...+.||+|.||+||+|...+       ..||||.++..... ...+|++|+++|..|+|||||+|+|+|  .+..+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            345567789999999999997653       45999999987655 567899999999999999999999999  45789


Q ss_pred             EEEEecCCCChhhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          598 LVYEYLPNGSLEDRLSCKDN-----------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      +|+|||..|+|.++|.....           .++|+..+.+.|+.|||.|+.||-+   +.+|||||...|+||+++..|
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEE
Confidence            99999999999999964311           3459999999999999999999999   789999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCc--hHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT--KEVQY  743 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~--~~~~~  743 (888)
                      ||+|||+++.+...++....      ....-.++|||||.+..++||.+||||||||+|||+++ |+-||.+.  .++..
T Consensus       643 KIsDfGLsRdiYssDYYk~~------~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe  716 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVR------GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE  716 (774)
T ss_pred             Eecccccchhhhhhhhhccc------CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence            99999999977665543322      12234789999999999999999999999999999998 88888643  34455


Q ss_pred             HHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       744 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      .+..+++.        ..|..+|..++.|+..||+.+|++||++ .+|-..|+....
T Consensus       717 ~i~~g~lL--------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF-~eI~~~L~~~~~  764 (774)
T KOG1026|consen  717 CIRAGQLL--------SCPENCPTEVYSLMLECWNENPKRRPSF-KEIHSRLQAWAQ  764 (774)
T ss_pred             HHHcCCcc--------cCCCCCCHHHHHHHHHHhhcCcccCCCH-HHHHHHHHHHHh
Confidence            55555542        2466777999999999999999999999 888888887643

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=338.09  Aligned_cols=250  Identities=28%  Similarity=0.390  Sum_probs=196.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--------------ChhHHHHHHHHHHhcCCCCeeeeec
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------GPSEFQQEIDILSKIRHPNLVTLVG  590 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--------------~~~~~~~Ei~iL~~l~HpnIv~l~g  590 (888)
                      -++|.+...||+|.||.|-+|...  ++.||||++.+....              ..+.+.+||.+|++|+|||||+|+.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            457999999999999999999876  588999999764211              1247889999999999999999999


Q ss_pred             ccC----CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          591 ACP----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       591 ~~~----~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      +.+    +.+|||+|||..|.+...=   ...+.+++.+++.|+.++..||.|||.   +|||||||||+|+||+.+|++
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcE
Confidence            874    4799999999998876532   223339999999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCC----CCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE----LTPKSDVYSFGIILLRLLTGRPALGITKEVQ  742 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~  742 (888)
                      ||+|||.+..+..........   .....+|||.|+|||.+.++.    -+.+.||||+||+||.|+.|+.||.......
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~---~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~  326 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDD---QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE  326 (576)
T ss_pred             EeeccceeeecccCCccccHH---HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH
Confidence            999999998775442222111   122367999999999997743    3467899999999999999999997665543


Q ss_pred             HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          743 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       743 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..-..  ..   +++.-.......+.+.+||.++|++||..|.++ .+|
T Consensus       327 l~~KI--vn---~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l-~~i  369 (576)
T KOG0585|consen  327 LFDKI--VN---DPLEFPENPEINEDLKDLIKRLLEKDPEQRITL-PDI  369 (576)
T ss_pred             HHHHH--hc---CcccCCCcccccHHHHHHHHHHhhcChhheeeh-hhh
Confidence            32211  11   111111112346789999999999999999998 454

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-38  Score=343.61  Aligned_cols=249  Identities=25%  Similarity=0.369  Sum_probs=202.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhH--HHHHHHHHHhcC-CCCeeeeecccC--C-ceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIR-HPNLVTLVGACP--E-VWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~--~~~Ei~iL~~l~-HpnIv~l~g~~~--~-~~~L  598 (888)
                      .++|...++||.|.||.||+|+..  +..||||.++..-.. .++  -.+|+..|++|+ |||||+|..++-  + .+|+
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            357889999999999999999765  678999998865433 333  458999999999 999999999883  3 6899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      |||||+ .+|.+++..+  +..|++..+..|+.||++||+|+|.   +|+.||||||+|||+..+..+||+|||+|+.+.
T Consensus        88 VfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   88 VFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             eHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence            999995 6999999644  6789999999999999999999999   999999999999999999999999999999765


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc----
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL----  753 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~----  753 (888)
                      ...         ..|..+.|.+|.|||+|. .+-|+.+.|+|++|||++|+.+-+|.|.+.++.+.....-.+...    
T Consensus       162 Skp---------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~  232 (538)
T KOG0661|consen  162 SKP---------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKD  232 (538)
T ss_pred             cCC---------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccc
Confidence            432         235567899999999885 567999999999999999999999999998887665542211110    


Q ss_pred             ---------------cCC-----CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          754 ---------------LDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       754 ---------------ld~-----~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                                     +..     +..-.| ..+.++.+|+.+||..||.+||++ ++.++
T Consensus       233 ~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA-~~al~  290 (538)
T KOG0661|consen  233 SWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTA-SQALQ  290 (538)
T ss_pred             cchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccH-HHHhc
Confidence                           000     000012 245789999999999999999999 44443

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4e-37  Score=338.35  Aligned_cols=259  Identities=27%  Similarity=0.462  Sum_probs=197.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC------------------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeee
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL  588 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~------------------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l  588 (888)
                      ++|.+.++||+|+||.||++.+.                  +..||+|++...... ....|.+|+.+|.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            46888899999999999999753                  236999998764322 23568999999999999999999


Q ss_pred             ecccC--CceEEEEEecCCCChhhhhhccC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceee
Q 002719          589 VGACP--EVWTLVYEYLPNGSLEDRLSCKD----------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH  650 (888)
Q Consensus       589 ~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~----------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiH  650 (888)
                      +++|.  +..++||||+++|+|.+++....                ....+++..++.++.||+.||.|||+   +||+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence            99883  56899999999999999885421                12357888999999999999999999   89999


Q ss_pred             ccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh
Q 002719          651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT  730 (888)
Q Consensus       651 rDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt  730 (888)
                      |||||+|||++.++.+||+|||+++.+.......      ......++..|+|||++..+.++.++|||||||++|+|++
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~  235 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM  235 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeE------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence            9999999999999999999999997654322111      1122346789999999998899999999999999999987


Q ss_pred             --CCCCCCCchHHHHHHhhcc-cccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          731 --GRPALGITKEVQYALDTGK-LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       731 --G~~Pf~~~~~~~~~~~~~~-~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                        +..||.............. +...........+...+..+.+|+.+||+.+|.+||++ ++|.+.|+
T Consensus       236 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~-~~i~~~l~  303 (304)
T cd05096         236 LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF-SDIHAFLT  303 (304)
T ss_pred             ccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH-HHHHHHHh
Confidence              5567765433221111110 00000111111233455789999999999999999999 77777664

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=350.85  Aligned_cols=241  Identities=23%  Similarity=0.293  Sum_probs=202.1

Q ss_pred             hhcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CChhHHHHHHHHHHhcC-CCCeeeeeccc--CCce
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVW  596 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~  596 (888)
                      ..-.+|...+.||+|.||+|+++..++  ..+|||++++...   .+.+....|..|+...+ ||.++.|+.+|  .++.
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            345689999999999999999998874  6799999998643   33556788999988885 99999999999  5689


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      |+||||+.||++..+.    ....|++..+..|+..|+.||.|||+   +||||||||.+|||||..|++||+|||+|+.
T Consensus       445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence            9999999999954443    34569999999999999999999999   9999999999999999999999999999985


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      .-..+.  .      .....|||.|||||++.+..|+.++|+|||||+|||||+|.+||.+.++.+..-..       -.
T Consensus       518 ~m~~g~--~------TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI-------~~  582 (694)
T KOG0694|consen  518 GMGQGD--R------TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI-------VN  582 (694)
T ss_pred             cCCCCC--c------cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-------hc
Confidence            432221  1      13456999999999999999999999999999999999999999887765432111       11


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ....+|...+.+...++.++|..+|++|--.
T Consensus       583 d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  583 DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            2234677888999999999999999999876

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-37  Score=338.85  Aligned_cols=235  Identities=25%  Similarity=0.335  Sum_probs=194.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|...  ++.||+|++.....   .....+.+|+.+|+.++||||+++++++.  ...++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888999999999999999886  68899999865322   22456889999999999999999999874  4688999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~  154 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR  154 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence            99999999999853   3468999999999999999999999   89999999999999999999999999998765321


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .           ....||+.|+|||++.+..++.++|||||||++|+|++|+.||..............       ....
T Consensus       155 ~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~-------~~~~  216 (291)
T cd05612         155 T-----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA-------GKLE  216 (291)
T ss_pred             c-----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCcC
Confidence            1           123589999999999998999999999999999999999999976554322111110       0112


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      +|...+..+.+|+.+||+.||.+||+
T Consensus       217 ~~~~~~~~~~~li~~~l~~dp~~R~~  242 (291)
T cd05612         217 FPRHLDLYAKDLIKKLLVVDRTRRLG  242 (291)
T ss_pred             CCccCCHHHHHHHHHHcCCCHHHccC
Confidence            34444678999999999999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-38  Score=339.69  Aligned_cols=242  Identities=26%  Similarity=0.365  Sum_probs=200.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ..|.....||+|.||.||+|.+.  ++.||||++...... ..+.+++|+.+|.+++++||.++||.+  ...++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            35666778999999999999987  577999999876443 357899999999999999999999987  5578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      |.||++.+.|.   ....+.+..+.-|+.+++.||.|||.   ++.+|||||+.|||+..+|.+||+|||.+..+.....
T Consensus        93 ~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            99999999993   44556888899999999999999999   8999999999999999999999999999987655432


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        +...+||+.|||||++....|+.|+||||||++.+||++|.||+........      +..+.....+...
T Consensus       167 r--------r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------lflIpk~~PP~L~  232 (467)
T KOG0201|consen  167 R--------RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------LFLIPKSAPPRLD  232 (467)
T ss_pred             c--------cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------EEeccCCCCCccc
Confidence            2        2456799999999999988999999999999999999999999975554221      1222222222333


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...+..+.+++..||++||+.||++.+
T Consensus       233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~  259 (467)
T KOG0201|consen  233 GDFSPPFKEFVEACLDKNPEFRPSAKE  259 (467)
T ss_pred             cccCHHHHHHHHHHhhcCcccCcCHHH
Confidence            355678999999999999999999843

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=6e-37  Score=334.09  Aligned_cols=241  Identities=25%  Similarity=0.345  Sum_probs=193.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .|...+.||+|+||.||+|...  +..||+|.+.....   .....+.+|+.+|..++|+||+++++++  .+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3677889999999999999875  68899999875432   2234578999999999999999999987  457889999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++... ....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++.......
T Consensus        81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence            99999999887533 23468999999999999999999999   899999999999999999999999999987653221


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAG  759 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~  759 (888)
                      .         .....||+.|+|||++.+..++.++|||||||+||+|++|++||.......  ..+... .    .....
T Consensus       157 ~---------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-~----~~~~~  222 (285)
T cd05631         157 T---------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-V----KEDQE  222 (285)
T ss_pred             e---------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH-h----hcccc
Confidence            1         123458999999999999999999999999999999999999997543211  111110 0    11112


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .++...+..+.+|+.+||+.||.+||+.
T Consensus       223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05631         223 EYSEKFSEDAKSICRMLLTKNPKERLGC  250 (285)
T ss_pred             cCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence            2334456789999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-38  Score=345.78  Aligned_cols=238  Identities=28%  Similarity=0.484  Sum_probs=196.3

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCChhh
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED  610 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~  610 (888)
                      +.-||.|+.|.||+|.+.+..||||.++..       -..+|+-|++|+||||+.|.|+|.  ..+|||||||+.|-|..
T Consensus       129 LeWlGSGaQGAVF~Grl~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~  201 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLHNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE  201 (904)
T ss_pred             hhhhccCcccceeeeeccCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence            345999999999999999999999987532       235788899999999999999995  46889999999999999


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC  690 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~  690 (888)
                      +|+   ...+++......|..+||.|+.|||.   +.|||||||.-||||+.+..|||+|||.++......         
T Consensus       202 VLk---a~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---------  266 (904)
T KOG4721|consen  202 VLK---AGRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---------  266 (904)
T ss_pred             HHh---ccCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhh---------
Confidence            994   34568888899999999999999999   889999999999999999999999999988665431         


Q ss_pred             ccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 002719          691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA  770 (888)
Q Consensus       691 ~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~  770 (888)
                      .+-.+.||..|||||++.+.+.+.|+|||||||+|||||||..||...+.....+..|  .+.   +.-..|..+++.+.
T Consensus       267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG--sNs---L~LpvPstcP~Gfk  341 (904)
T KOG4721|consen  267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG--SNS---LHLPVPSTCPDGFK  341 (904)
T ss_pred             hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc--CCc---ccccCcccCchHHH
Confidence            1234579999999999999999999999999999999999999996554432222222  111   12234566778999


Q ss_pred             HHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          771 NLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       771 ~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      -|+++||+-.|.+||+| ..++..|+-.
T Consensus       342 lL~Kqcw~sKpRNRPSF-rqil~HldIa  368 (904)
T KOG4721|consen  342 LLLKQCWNSKPRNRPSF-RQILLHLDIA  368 (904)
T ss_pred             HHHHHHHhcCCCCCccH-HHHHHHHhhc
Confidence            99999999999999999 4555555543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-37  Score=346.53  Aligned_cols=240  Identities=26%  Similarity=0.414  Sum_probs=202.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      +-|..++.||.|+.|.|-+|++.  |+.+|||++.+...   .....+.+|+-+|+.+.||||++||+++.  ..+|||+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            35778889999999999999875  78899999987632   23456899999999999999999999984  4799999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||-|+++|.   ..+++++.++.+++.||+.|+.|+|.   .+|+||||||+|+|||.++.+||+|||+|.+-..+
T Consensus        92 Eyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   92 EYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             EecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            9999999999994   44679999999999999999999999   88999999999999999999999999999865443


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPL  757 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--~~~~~~~~ld~~  757 (888)
                      ..         ....+|++.|.+||++.+.+|+ .++||||+|||||.||||+.||+..+-.....  ..|.+       
T Consensus       166 kl---------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-------  229 (786)
T KOG0588|consen  166 KL---------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-------  229 (786)
T ss_pred             cc---------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-------
Confidence            22         1234599999999999999885 78999999999999999999998655433322  22222       


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                        +.|...+.+..+|+.+|+..||..|.++ ++|+
T Consensus       230 --~MPs~Is~eaQdLLr~ml~VDp~~RiT~-~eI~  261 (786)
T KOG0588|consen  230 --EMPSNISSEAQDLLRRMLDVDPSTRITT-EEIL  261 (786)
T ss_pred             --cCCCcCCHHHHHHHHHHhccCccccccH-HHHh
Confidence              2355667889999999999999999999 5554

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3e-37  Score=343.91  Aligned_cols=236  Identities=22%  Similarity=0.310  Sum_probs=194.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|.+.  ++.||||++....   ......+.+|+.+|+.++||||+++++++  .+..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            47888999999999999999886  5789999987542   12345688999999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++......
T Consensus        98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            99999999999853   3468899999999999999999999   89999999999999999999999999999865332


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .           ....||+.|+|||++.+..++.++|||||||++|+|++|++||.............  ..     ...
T Consensus       172 ~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~--~~-----~~~  233 (329)
T PTZ00263        172 T-----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKIL--AG-----RLK  233 (329)
T ss_pred             c-----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHh--cC-----CcC
Confidence            1           12348999999999999999999999999999999999999997655432211110  00     112


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +|...+..+.+|+.+||+.||.+||+.
T Consensus       234 ~p~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        234 FPNWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            334455789999999999999999973

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-37  Score=341.67  Aligned_cols=247  Identities=27%  Similarity=0.353  Sum_probs=198.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|.+.  +..||||++.....   .....+.+|+.++..++||||+++++++  .+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36889999999999999999886  57899999875422   2245688999999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~  154 (333)
T cd05600          81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY  154 (333)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccc
Confidence            99999999999943   3468899999999999999999999   89999999999999999999999999998765331


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-CCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld-~~~~  759 (888)
                                 .....||+.|+|||++.+..++.++|||||||++|+|++|.+||..................+. +...
T Consensus       155 -----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  223 (333)
T cd05600         155 -----------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD  223 (333)
T ss_pred             -----------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCC
Confidence                       1234589999999999999999999999999999999999999976554332221111111111 1111


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ......+..+.+|+.+||..+|.+||++ ++++
T Consensus       224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~-~~ll  255 (333)
T cd05600         224 DPRFNLSDEAWDLITKLINDPSRRFGSL-EDIK  255 (333)
T ss_pred             ccccccCHHHHHHHHHHhhChhhhcCCH-HHHH
Confidence            1112345789999999999999999998 5554

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3.4e-37  Score=342.54  Aligned_cols=231  Identities=23%  Similarity=0.268  Sum_probs=187.8

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||++...  ++.||||++.....   .....+.+|+.+|+.++||||+++++++  .+..++||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            5999999999999875  57899999875422   2234678899999999999999999987  457899999999999


Q ss_pred             hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      |.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++........    
T Consensus        82 L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~----  151 (323)
T cd05571          82 LFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT----  151 (323)
T ss_pred             HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc----
Confidence            9998843   3568999999999999999999999   89999999999999999999999999998753221110    


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............  .     ....+|...+.
T Consensus       152 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~--~-----~~~~~p~~~~~  220 (323)
T cd05571         152 ----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--M-----EEIRFPRTLSP  220 (323)
T ss_pred             ----ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH--c-----CCCCCCCCCCH
Confidence                123458999999999999999999999999999999999999997654322211110  0     01123445567


Q ss_pred             HHHHHHHHHhhcCCCCCCC
Q 002719          768 QLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RPs  786 (888)
                      .+.+|+.+||+.||.+||+
T Consensus       221 ~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         221 EAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             HHHHHHHHHccCCHHHcCC
Confidence            8999999999999999993

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.7e-36  Score=326.88  Aligned_cols=251  Identities=22%  Similarity=0.336  Sum_probs=198.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      .+|.+.+.||+|+||.||+|.+.     +..||+|.++..... ....|.+|+.++.+++||||++++|++  .+..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            46888899999999999999764     367999998765322 234688999999999999999999987  4578999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|.+++...  ...+++..++.++.|++.||.|||+   +|++||||||+|||++.++.+|++|||.+.....
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          85 TEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            9999999999998533  3468999999999999999999999   8999999999999999999999999998764322


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ....       ......++..|+|||.+.+..++.++|||||||++|++++ |.+||................      .
T Consensus       160 ~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------~  226 (266)
T cd05064         160 EAIY-------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF------R  226 (266)
T ss_pred             cchh-------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC------C
Confidence            1110       0112235678999999999999999999999999999775 999997654433221111111      1


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ...+...+..+.+++.+||+.+|.+||++ +++.+.|..
T Consensus       227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~-~~i~~~l~~  264 (266)
T cd05064         227 LPAPRNCPNLLHQLMLDCWQKERGERPRF-SQIHSILSK  264 (266)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCCCH-HHHHHHHHh
Confidence            11233455789999999999999999999 777777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.3e-36  Score=344.97  Aligned_cols=256  Identities=24%  Similarity=0.392  Sum_probs=198.8

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeecccC--Cc
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EV  595 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~  595 (888)
                      .++|.+.+.||+|+||.||+|.+.       +..||||+++.... .....+.+|+.+|..+ +||||++++++|.  +.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            447899999999999999999742       35799999875432 2345688999999999 8999999999984  46


Q ss_pred             eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDN----------------------------------------------------------  617 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~----------------------------------------------------------  617 (888)
                      .++||||+++|+|.+++.....                                                          
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            8899999999999998854211                                                          


Q ss_pred             --------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          618 --------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       618 --------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                                    ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++.........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          1257889999999999999999999   89999999999999999999999999999865432211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .      ......++..|+|||.+.+..++.++|||||||++|+|++ |.+||............  +..   ......|
T Consensus       271 ~------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~--~~~---~~~~~~~  339 (375)
T cd05104         271 V------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM--IKE---GYRMLSP  339 (375)
T ss_pred             c------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH--HHh---CccCCCC
Confidence            0      0112335678999999999999999999999999999998 89999654322111111  000   0011122


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ...+..+.+|+.+||+.||.+||++ .+|++.|+.
T Consensus       340 ~~~~~~l~~li~~cl~~dP~~RPs~-~eil~~l~~  373 (375)
T cd05104         340 ECAPSEMYDIMKSCWDADPLKRPTF-KQIVQLIEQ  373 (375)
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCH-HHHHHHHHh
Confidence            3345789999999999999999999 777777764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.9e-36  Score=329.61  Aligned_cols=250  Identities=26%  Similarity=0.322  Sum_probs=194.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      ++|.+.+.||+|+||.||+|.++  +..||+|++.....  .....+.+|+.+++.++||||++++++|  .+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            36889999999999999999986  57899999875432  2245688999999999999999999988  357899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++++|..+..   ....+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            999887765542   23468999999999999999999999   899999999999999999999999999998754322


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc---------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN---------  752 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~---------  752 (888)
                      ...       .....||+.|+|||++.+..++.++|||||||++|+|++|++||.................         
T Consensus       155 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07848         155 NAN-------YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL  227 (287)
T ss_pred             ccc-------ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence            111       1234589999999999988999999999999999999999999976543322211111000         


Q ss_pred             ---------ccCCCC-------CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 ---------LLDPLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ---------~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                               ...+..       ..+....+..+.+|+.+||+.||.+||++ +++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~-~~~  281 (287)
T cd07848         228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT-EQC  281 (287)
T ss_pred             hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH-HHH
Confidence                     000000       00111245679999999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-37  Score=337.45  Aligned_cols=231  Identities=24%  Similarity=0.312  Sum_probs=188.4

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL  608 (888)
                      ||+|+||.||+|...  +..||+|++....   ......+.+|+.+|.+++||||++++++|  .+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999886  5789999987532   22345678899999999999999999988  4578999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++........     
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-----  149 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK-----  149 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc-----
Confidence            999853   3468999999999999999999999   89999999999999999999999999998754322110     


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ  768 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~  768 (888)
                         .....||+.|+|||++.+..++.++|||||||++|+|++|++||............  ..     ....+|...+..
T Consensus       150 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~--~~-----~~~~~~~~~~~~  219 (312)
T cd05585         150 ---TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI--LQ-----EPLRFPDGFDRD  219 (312)
T ss_pred             ---cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH--Hc-----CCCCCCCcCCHH
Confidence               12345899999999999999999999999999999999999999765433221111  11     111234445678


Q ss_pred             HHHHHHHHhhcCCCCCCCh
Q 002719          769 LANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       769 l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +.+|+.+||..||.+||++
T Consensus       220 ~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         220 AKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             HHHHHHHHcCCCHHHcCCC
Confidence            9999999999999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.4e-36  Score=344.61  Aligned_cols=258  Identities=24%  Similarity=0.397  Sum_probs=200.7

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC--C
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP--E  594 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~  594 (888)
                      ..++|.+.+.||+|+||.||+|...       ...||||++...... ....+.+|+.+|+.+ +||||++++++|.  .
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            3457899999999999999998753       247999999754322 235688999999999 8999999999984  4


Q ss_pred             ceEEEEEecCCCChhhhhhccC----------------------------------------------------------
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKD----------------------------------------------------------  616 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~----------------------------------------------------------  616 (888)
                      ..++||||+++|+|.+++....                                                          
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            6899999999999999885321                                                          


Q ss_pred             ---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          617 ---------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       617 ---------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                               ...++++..++.|+.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.+......    
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~----  268 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY----  268 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce----
Confidence                     11357888999999999999999999   89999999999999999999999999999765432111    


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                        .......++..|+|||++.+..++.++|||||||++|+|++ |++||.............  ...   .....+...+
T Consensus       269 --~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~--~~~---~~~~~~~~~~  341 (374)
T cd05106         269 --VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV--KRG---YQMSRPDFAP  341 (374)
T ss_pred             --eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH--Hcc---cCccCCCCCC
Confidence              01122235678999999998999999999999999999997 999996543221111110  000   1111233345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..+.+++.+||+.+|.+||++ .+|++.|+.+
T Consensus       342 ~~l~~li~~cl~~dp~~RPs~-~~l~~~l~~~  372 (374)
T cd05106         342 PEIYSIMKMCWNLEPTERPTF-SQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHHHcCCChhhCcCH-HHHHHHHHHH
Confidence            789999999999999999999 7888888764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-36  Score=317.64  Aligned_cols=247  Identities=27%  Similarity=0.335  Sum_probs=198.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeec----ccCCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG----ACPEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g----~~~~~~~LV  599 (888)
                      +.|+.++.|++|.||.||+|.++  +..||+|.++......  +-.-.+||.+|.+++|||||.+-.    .--+..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            35788899999999999999887  5779999998754221  335689999999999999999854    445679999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ||||+. +|..++...  ..+|...++.-+..|++.||+|||.   +.|+||||||+|+|++..|.+||+|||+|+.+..
T Consensus       156 Me~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGS  229 (419)
T ss_pred             HHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence            999975 888888533  3579999999999999999999999   9999999999999999999999999999998876


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC-
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL-  757 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~-  757 (888)
                      ...        ..|..+-|.+|.|||++.+. .|+.+.|+||+|||+.||++++|.|.+..+.+.....-.+  +-.|. 
T Consensus       230 p~k--------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l--lGtPte  299 (419)
T KOG0663|consen  230 PLK--------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL--LGTPSE  299 (419)
T ss_pred             Ccc--------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH--hCCCcc
Confidence            521        23455679999999999875 6999999999999999999999999888776544332111  11111 


Q ss_pred             -------------------------CCCCChh-hHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          758 -------------------------AGDWPFV-QAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       758 -------------------------~~~~p~~-~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                                               ...++.. .++.-.+|+..+|.+||.+|.|+.+.
T Consensus       300 ~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~  358 (419)
T KOG0663|consen  300 AIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDG  358 (419)
T ss_pred             ccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHh
Confidence                                     1111212 34677899999999999999998443

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.4e-36  Score=333.08  Aligned_cols=255  Identities=22%  Similarity=0.379  Sum_probs=200.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--C----eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~----~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV  599 (888)
                      .+|...+.||+|+||.||+|.+.  +    ..||+|++..... .....+.+|+.+++.++||||++++|+| .+..++|
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            46889999999999999999863  2    2489999875432 2345788999999999999999999988 4467899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||+++|+|.+++...  ...+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.+..
T Consensus        87 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          87 TQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             eecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence            9999999999998533  3458889999999999999999999   8999999999999999999999999999987653


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ......      .....++..|+|||++.+..++.++|||||||++|+|++ |.+||...............      ..
T Consensus       162 ~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~------~~  229 (316)
T cd05108         162 DEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG------ER  229 (316)
T ss_pred             CCccee------ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC------CC
Confidence            321110      112235678999999999999999999999999999998 99999765433221111000      01


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      ...+...+..+.+++.+||..+|.+||++ .+++..|..+..
T Consensus       230 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~l~~~l~~~~~  270 (316)
T cd05108         230 LPQPPICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMAR  270 (316)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHc
Confidence            11123345679999999999999999999 666666665543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.2e-36  Score=338.10  Aligned_cols=231  Identities=22%  Similarity=0.272  Sum_probs=187.0

Q ss_pred             ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      +.||+|+||.||++...  +..||+|++.....   .....+.+|+.+++.++||||++++++|  .+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36999999999999875  57899999875422   2234577899999999999999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++..   ...+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.........   
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---  151 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---  151 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc---
Confidence            99988843   3468999999999999999999999   89999999999999999999999999998753221110   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............  .     ....+|...+
T Consensus       152 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~--~-----~~~~~p~~~~  219 (323)
T cd05595         152 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--M-----EEIRFPRTLS  219 (323)
T ss_pred             -----cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh--c-----CCCCCCCCCC
Confidence                 123458999999999999999999999999999999999999997554332211110  0     0112344556


Q ss_pred             HHHHHHHHHHhhcCCCCCC
Q 002719          767 EQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RP  785 (888)
                      ..+.+|+.+||+.||.+||
T Consensus       220 ~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         220 PEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             HHHHHHHHHHccCCHHHhC
Confidence            7899999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=3.4e-36  Score=326.77  Aligned_cols=253  Identities=28%  Similarity=0.460  Sum_probs=200.4

Q ss_pred             CCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      +|.+.+.||+|+||.||+|...+       ..||+|.+...... ....|.+|+.++..++||||+++++++.  ...++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            67888899999999999998653       46999998754322 2356889999999999999999999884  46889


Q ss_pred             EEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          599 VYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      +|||+++|+|.+++.....             ...+++..++.++.|++.||.|||.   ++++||||||+|||++.++.
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence            9999999999999864321             1458889999999999999999999   89999999999999999999


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA  744 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~  744 (888)
                      +||+|||++..........      ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.........
T Consensus       163 ~~L~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~  236 (283)
T cd05048         163 VKISDFGLSRDIYSADYYR------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI  236 (283)
T ss_pred             EEECCCcceeecccccccc------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            9999999997654322111      1123346889999999998899999999999999999998 99998654432211


Q ss_pred             HhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          745 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       745 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ...      ........+...+..+.+|+.+||+.||.+||++ ++|.+.|+.
T Consensus       237 ~~i------~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-~~i~~~l~~  282 (283)
T cd05048         237 EMI------RSRQLLPCPEDCPARVYALMIECWNEIPARRPRF-KDIHTRLRS  282 (283)
T ss_pred             HHH------HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHhc
Confidence            110      0111112244556889999999999999999999 777777754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.2e-36  Score=327.06  Aligned_cols=245  Identities=40%  Similarity=0.649  Sum_probs=189.7

Q ss_pred             ccceeeecCceEEEEEEEC------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          532 PSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       532 ~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      ..+.||.|.||.||+|.+.      +..|+||.++..... ..+.|.+|++.+++++||||++++|+|.  +..++||||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3567999999999999988      578999999654322 2568999999999999999999999984  468999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.++|... ....+++..++.|+.||+.||.|||+   ++++|+||+++|||++.++.+||+|||++........
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            9999999999655 23568999999999999999999999   8899999999999999999999999999987632211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH--HhhcccccccCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLKNLLDPLAG  759 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~--~~~~~~~~~ld~~~~  759 (888)
                      .      .......+...|+|||.+.+..++.++||||||+++|||++ |+.||.........  +..+..        .
T Consensus       159 ~------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~--------~  224 (259)
T PF07714_consen  159 Y------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR--------L  224 (259)
T ss_dssp             E------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------T
T ss_pred             c------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------c
Confidence            1      11122346789999999999999999999999999999999 78998765433321  122111        1


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+...+..+.+++..||..+|.+||++ +++++.|
T Consensus       225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~-~~i~~~L  259 (259)
T PF07714_consen  225 PIPDNCPKDIYSLIQQCWSHDPEKRPSF-QEILQEL  259 (259)
T ss_dssp             TSBTTSBHHHHHHHHHHT-SSGGGS--H-HHHHHHH
T ss_pred             eeccchhHHHHHHHHHHcCCChhhCcCH-HHHHhcC
Confidence            1233445789999999999999999999 6666554

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.8e-36  Score=352.79  Aligned_cols=248  Identities=21%  Similarity=0.247  Sum_probs=199.1

Q ss_pred             CCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .|.+.+.||+|+||.||+|...   +..||+|.+..........+.+|+.+|+.++||||++++++|  .+..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            4888999999999999999764   457888977554433345678899999999999999999988  45789999999


Q ss_pred             CCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          604 PNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       604 ~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +||+|.++|... ....++++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+.....
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            999999988543 334578999999999999999999999   8999999999999999999999999999987643221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .      .......||+.|+|||++.+..++.++|||||||++|+|++|++||............  ......    ..|
T Consensus       225 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~--~~~~~~----~~~  292 (478)
T PTZ00267        225 L------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV--LYGKYD----PFP  292 (478)
T ss_pred             c------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhCCCC----CCC
Confidence            1      1123345999999999999999999999999999999999999999765443221111  111111    223


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...+..+.+|+.+||..+|.+||++.+.+
T Consensus       293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l  321 (478)
T PTZ00267        293 CPVSSGMKALLDPLLSKNPALRPTTQQLL  321 (478)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence            34557899999999999999999985544

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-36  Score=319.39  Aligned_cols=261  Identities=25%  Similarity=0.396  Sum_probs=207.2

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-------hhHHHHHHHHHHhcCCCCeeeeecc
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-------PSEFQQEIDILSKIRHPNLVTLVGA  591 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-------~~~~~~Ei~iL~~l~HpnIv~l~g~  591 (888)
                      .+-....++|-.+++||+|||+.||++.+-  .+.||+|+-..+....       .+...+|..|.+.|+||.||++|++
T Consensus       456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDy  535 (775)
T KOG1151|consen  456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDY  535 (775)
T ss_pred             ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeee
Confidence            334455668999999999999999999764  5789999865432111       2356789999999999999999999


Q ss_pred             c---CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc---CCCc
Q 002719          592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFV  665 (888)
Q Consensus       592 ~---~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~---~~~~  665 (888)
                      |   .+.+|-|+|||+|.+|+.+|.   ....+++.++..|+.||+.||.||...++ +|||-||||.||||-   .-|.
T Consensus       536 fslDtdsFCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNILLv~GtacGe  611 (775)
T KOG1151|consen  536 FSLDTDSFCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNILLVNGTACGE  611 (775)
T ss_pred             eeeccccceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEEEecCcccce
Confidence            8   468999999999999999994   44568999999999999999999999774 899999999999995   4478


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHH
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEV  741 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~  741 (888)
                      +||+|||+++.+.......... ........||.+|++||+|.-+    ..+.|+||||+|||+|+++.|+.||+.....
T Consensus       612 IKITDFGLSKIMdddSy~~vdG-meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  612 IKITDFGLSKIMDDDSYNSVDG-MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eEeeecchhhhccCCccCcccc-eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            9999999999987665442221 1234567899999999998644    4788999999999999999999999877666


Q ss_pred             HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          742 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       742 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +..+..+.+.....-..+.-| ..+.+..++|++||++.-++|.+.
T Consensus       691 QdILqeNTIlkAtEVqFP~KP-vVsseAkaFIRRCLaYRKeDR~DV  735 (775)
T KOG1151|consen  691 QDILQENTILKATEVQFPPKP-VVSSEAKAFIRRCLAYRKEDRIDV  735 (775)
T ss_pred             HHHHhhhchhcceeccCCCCC-ccCHHHHHHHHHHHHhhhhhhhhH
Confidence            655555544332222222222 345678999999999999999886

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.2e-36  Score=340.78  Aligned_cols=235  Identities=23%  Similarity=0.320  Sum_probs=192.9

Q ss_pred             cCCCCccceeeecCceEEEEEEECC---eEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~---~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      .++|.+.+.||+|+||.||+|.+.+   ..||+|.+....   ......+.+|+.+++.++||||+++++++.  +..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3468899999999999999998653   579999986432   223456889999999999999999999984  46899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++|+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++....
T Consensus       109 v~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            9999999999999853   3468999999999999999999999   899999999999999999999999999997653


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ...           ....||+.|+|||++.+..++.++|||||||++|+|++|.+||..............  .     .
T Consensus       183 ~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~--~-----~  244 (340)
T PTZ00426        183 TRT-----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILE--G-----I  244 (340)
T ss_pred             CCc-----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhc--C-----C
Confidence            211           123589999999999988899999999999999999999999976654322111110  0     1


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCC
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RP  785 (888)
                      ..+|...+..+.+++.+||+.+|.+|+
T Consensus       245 ~~~p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        245 IYFPKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHcC
Confidence            123344557789999999999999996

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2e-36  Score=337.17  Aligned_cols=230  Identities=23%  Similarity=0.268  Sum_probs=187.5

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||++...  +..||+|++.....   .....+.+|+.+|+.++||||+++++++  .+..++||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            5999999999999875  57899999975422   2235678899999999999999999887  457899999999999


Q ss_pred             hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      |.+++..   ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++........    
T Consensus        82 L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~----  151 (328)
T cd05593          82 LFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT----  151 (328)
T ss_pred             HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc----
Confidence            9988843   3468999999999999999999999   89999999999999999999999999998753221110    


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............       .....+|...+.
T Consensus       152 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~-------~~~~~~p~~~~~  220 (328)
T cd05593         152 ----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-------MEDIKFPRTLSA  220 (328)
T ss_pred             ----cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc-------cCCccCCCCCCH
Confidence                123458999999999999999999999999999999999999997654432211110       011123445567


Q ss_pred             HHHHHHHHHhhcCCCCCC
Q 002719          768 QLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RP  785 (888)
                      .+.+|+.+||..||.+||
T Consensus       221 ~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         221 DAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             HHHHHHHHHcCCCHHHcC
Confidence            899999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-37  Score=308.88  Aligned_cols=241  Identities=25%  Similarity=0.412  Sum_probs=201.0

Q ss_pred             cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      -++|++.+.||+|.||.||.|..+.  --||+|++.+...   ....++.+|++|-+.|+||||+++|++|.  ...||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            3478999999999999999998874  5699999876532   23467999999999999999999999994  478999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||.++|+|...|... ....+++.....++.|+|.||.|+|.   ++||||||||+|+|++..+.+||+|||-+...+.
T Consensus       101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~  176 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  176 (281)
T ss_pred             EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence            9999999999999533 34568999999999999999999999   8999999999999999999999999998765431


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                          ....      ...||..|.+||...+..++...|+|++|++.||++.|.+||........-.+..+       ...
T Consensus       177 ----~kR~------tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k-------~~~  239 (281)
T KOG0580|consen  177 ----NKRK------TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK-------VDL  239 (281)
T ss_pred             ----CCce------eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH-------ccc
Confidence                1222      33499999999999999999999999999999999999999976553322222211       122


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .+|...+....+||.+|+.++|.+|....
T Consensus       240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~  268 (281)
T KOG0580|consen  240 KFPSTISGGAADLISRLLVKNPIERLALT  268 (281)
T ss_pred             cCCcccChhHHHHHHHHhccCccccccHH
Confidence            34556678899999999999999999983

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.4e-37  Score=323.52  Aligned_cols=240  Identities=24%  Similarity=0.420  Sum_probs=202.3

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      ...+|++.+.||+|.||.|-++...  ++.||||.+++....+   .-++.+|++||+.|+||||+.+|.+|.  +...|
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            3457999999999999999999764  7899999998765443   446889999999999999999999995  57889


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||..+|.|.|++..   ...|++.+...++.||..|+.|+|.   ++++|||||.+|||||.|+.+||+|||++.++.
T Consensus       131 vMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  131 VMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             EEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhc
Confidence            9999999999999954   4569999999999999999999999   999999999999999999999999999998876


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLD  755 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~ld  755 (888)
                      .....         +.+.|++.|.+||++.+.+|. +..|-|||||+||-|+.|.-||++.+.....  +..|.+...  
T Consensus       205 ~~kfL---------qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP--  273 (668)
T KOG0611|consen  205 DKKFL---------QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP--  273 (668)
T ss_pred             cccHH---------HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC--
Confidence            54321         334599999999999998885 7899999999999999999999887654332  223332221  


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                              ..+....-||++||-.||.+|-++ ++|
T Consensus       274 --------~~PSdA~gLIRwmLmVNP~RRATi-eDi  300 (668)
T KOG0611|consen  274 --------ETPSDASGLIRWMLMVNPERRATI-EDI  300 (668)
T ss_pred             --------CCCchHHHHHHHHHhcCcccchhH-HHH
Confidence                    123457789999999999999998 555

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=6e-36  Score=333.65  Aligned_cols=247  Identities=23%  Similarity=0.345  Sum_probs=194.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .++|++.+.||+|+||.||++...  +..||+|++..... .....+.+|+++|++++||||+++++++  .+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            357999999999999999999886  57799999875422 1235689999999999999999999987  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|||+.  .+|+||||||+|||++.++.+||+|||++..+....
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  158 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence            9999999999853   34588999999999999999999982  359999999999999999999999999987653221


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-----------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-----------  750 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~-----------  750 (888)
                                .....||+.|+|||++.+..++.++|||||||++|+|+||+.||............+..           
T Consensus       159 ----------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
T cd06649         159 ----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS  228 (331)
T ss_pred             ----------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence                      12335899999999999889999999999999999999999999654332211110000           


Q ss_pred             -----------------------------ccccCCCCCCC-ChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          751 -----------------------------KNLLDPLAGDW-PFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       751 -----------------------------~~~ld~~~~~~-p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                                                   ..+........ ....+..+.+|+.+||..||++||++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~  296 (331)
T cd06649         229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLK  296 (331)
T ss_pred             cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHH
Confidence                                         00000000000 112456899999999999999999993

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=4.9e-36  Score=324.90  Aligned_cols=253  Identities=25%  Similarity=0.418  Sum_probs=198.6

Q ss_pred             hcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--Cc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~  595 (888)
                      .+++|++.+.||+|+||.||+|.+.+       ..||||.+..... .....+.+|+.+++.++||||+++++++.  ..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            45679999999999999999997643       5699998864322 22346889999999999999999999884  46


Q ss_pred             eEEEEEecCCCChhhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceee
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL  668 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL  668 (888)
                      .++||||+++|+|.+++.....       ...+++..++.++.|++.||.|||+   ++++||||||+|||++.++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            8899999999999999854321       2346788899999999999999999   89999999999999999999999


Q ss_pred             eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH--
Q 002719          669 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL--  745 (888)
Q Consensus       669 ~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~--  745 (888)
                      +|||++...........      .....+++.|+|||++.++.++.++|||||||++|+|++ |.+||..........  
T Consensus       161 ~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (277)
T cd05062         161 GDFGMTRDIYETDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV  234 (277)
T ss_pred             CCCCCccccCCcceeec------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999876543221111      112345788999999998899999999999999999999 788987554322111  


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ..+..        ...+...+..+.+++.+||+.+|.+||++ .++++.|+
T Consensus       235 ~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~~l~  276 (277)
T cd05062         235 MEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIK  276 (277)
T ss_pred             HcCCc--------CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHhh
Confidence            11111        11233445789999999999999999999 66666654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.3e-35  Score=317.60  Aligned_cols=248  Identities=25%  Similarity=0.456  Sum_probs=197.9

Q ss_pred             CCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP  604 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~  604 (888)
                      ++|.+.+.||+|+||.||++.+.. ..+|+|.+.... .....+.+|+.+|+.++||||++++++|.  +..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            357788899999999999998875 579999876432 33567899999999999999999999884  46899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|.+++....  ..+++..++.++.+++.||.|||+   +||+||||||+||+++.++.+||+|||+++.........
T Consensus        83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05114          83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS  157 (256)
T ss_pred             CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence            999999885332  358899999999999999999999   899999999999999999999999999987654322111


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             .....++..|+|||++.+..++.++||||||+++|+|++ |++||.................      ...|.
T Consensus       158 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~------~~~~~  224 (256)
T cd05114         158 -------SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR------LYRPK  224 (256)
T ss_pred             -------cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC------CCCCC
Confidence                   112235678999999988889999999999999999999 9999976554332222111111      11223


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+..+.+|+.+||..+|.+||++ +++++.|
T Consensus       225 ~~~~~~~~li~~c~~~~p~~Rps~-~~l~~~l  255 (256)
T cd05114         225 LASMTVYEVMYSCWHEKPEGRPTF-AELLRAI  255 (256)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCH-HHHHHhh
Confidence            345689999999999999999999 6666554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-36  Score=363.54  Aligned_cols=255  Identities=29%  Similarity=0.478  Sum_probs=208.4

Q ss_pred             CCCccceeeecCceEEEEEEECC-------eEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      +......||+|.||.||.|.+.+       ..||||.+.... .+...+|.+|..+|+.++|||||+++|+|-  ...+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            45567789999999999998763       249999988753 344678999999999999999999999993  46789


Q ss_pred             EEEecCCCChhhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          599 VYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ++|||.||+|..+|+...    ....++....+.++.|||+|+.||++   +++|||||...|+||+....+||+|||+|
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence            999999999999996542    14568999999999999999999999   88999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH---hhccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL---DTGKL  750 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~---~~~~~  750 (888)
                      +.+....+.....      ...-...|||||.|..+.++.|+|||||||+|||++| |..||...+..+...   ..+  
T Consensus       850 rDiy~~~yyr~~~------~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg--  921 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHG------EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG--  921 (1025)
T ss_pred             HhhhhchheeccC------ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--
Confidence            9554443322111      1234568999999999999999999999999999999 999998766554332   222  


Q ss_pred             ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccccC
Q 002719          751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC  802 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~~  802 (888)
                             .-+.|..++..+++|+..||+.+|++||++ ..+++.+..+....
T Consensus       922 -------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F-~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  922 -------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSF-RTIVEQDPAISNAA  965 (1025)
T ss_pred             -------ccCCCCCCChHHHHHHHHHccCChhhCccH-HHHHhhhhhhhhhh
Confidence                   223467788999999999999999999999 56666666655443

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.6e-36  Score=335.98  Aligned_cols=246  Identities=26%  Similarity=0.395  Sum_probs=207.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC--Cc-eEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EV-WTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~-~~LV~  600 (888)
                      ++|..++.+|+|+||.++....+  ++.+++|.+.......  +....+|+.+++++.|||||.+.+.|.  +. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            57889999999999999887665  5789999988765444  345789999999999999999999983  34 88999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      +||+||+|.+.+.+.. +..|++..+..|+.|++.|+.|||+   +.|+|||||+.|||++.++.|||+|||+|+.+...
T Consensus        84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            9999999999996554 5679999999999999999999998   88999999999999999999999999999988765


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...        .....||+.|+.||++.+.+|+.|+|||||||++|||++-+++|...+.........  .....|+   
T Consensus       160 ~~~--------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~--~~~~~Pl---  226 (426)
T KOG0589|consen  160 DSL--------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN--RGLYSPL---  226 (426)
T ss_pred             hhh--------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh--hccCCCC---
Confidence            411        123569999999999999999999999999999999999999998777655443332  2223443   


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                       |...+.++..|+..||..+|..||+..+.+
T Consensus       227 -p~~ys~el~~lv~~~l~~~P~~RPsa~~LL  256 (426)
T KOG0589|consen  227 -PSMYSSELRSLVKSMLRKNPEHRPSALELL  256 (426)
T ss_pred             -CccccHHHHHHHHHHhhcCCccCCCHHHHh
Confidence             445568899999999999999999995444

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3e-36  Score=333.95  Aligned_cols=237  Identities=25%  Similarity=0.297  Sum_probs=189.3

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|.+.  +..||||+++...   ......+..|..++..+ +||||+++++++  .+..++||||++||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            6999999999999886  4679999987542   12234556677777654 899999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++........    
T Consensus        82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~----  151 (316)
T cd05592          82 DLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG----  151 (316)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC----
Confidence            99998843   3468999999999999999999999   8999999999999999999999999999875432211    


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..............       ....+|...+
T Consensus       152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~-------~~~~~~~~~~  220 (316)
T cd05592         152 ----KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN-------DRPHFPRWIS  220 (316)
T ss_pred             ----ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-------CCCCCCCCCC
Confidence                11234589999999999988999999999999999999999999976654332211111       1122344456


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ..+.+|+.+||+.+|.+||++..++.
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            78999999999999999999855553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-36  Score=341.29  Aligned_cols=249  Identities=23%  Similarity=0.296  Sum_probs=193.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|...  ++.||||++....   ......+.+|+.+|..++||||++++++|  .+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            36889999999999999999875  6789999997532   12234578899999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++..+...
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  154 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS  154 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence            99999999999853   3468999999999999999999999   89999999999999999999999999998765322


Q ss_pred             cccCCCcc------------------------------ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh
Q 002719          681 EISSNNTT------------------------------LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT  730 (888)
Q Consensus       681 ~~~~~~~~------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt  730 (888)
                      ........                              ........||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~  234 (364)
T cd05599         155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV  234 (364)
T ss_pred             ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence            11000000                              000112469999999999999999999999999999999999


Q ss_pred             CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          731 GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       731 G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      |.+||..................+   ........+..+.+|+.+|+. +|.+|++
T Consensus       235 G~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~ll~-~p~~R~~  286 (364)
T cd05599         235 GYPPFCSDNPQETYRKIINWKETL---QFPDEVPLSPEAKDLIKRLCC-EAERRLG  286 (364)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCcc---CCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence            999997665433222211111111   000111235678999999996 9999998

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=353.77  Aligned_cols=262  Identities=22%  Similarity=0.327  Sum_probs=204.9

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeeeeeccc-----C-
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC-----P-  593 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~-----~-  593 (888)
                      +.....++.+.+.|.+|||+.||.+.+.+  ..||+|++...+....+.+.+|+++|++|. |||||.+++.+     . 
T Consensus        32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence            34456678889999999999999998863  789999988777777788999999999996 99999999943     1 


Q ss_pred             ---CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeec
Q 002719          594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD  670 (888)
Q Consensus       594 ---~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~D  670 (888)
                         -.+.|.||||.||.|-|++..+.... |++.++++|+.|+++|+.+||.+.+ +|||||||-+||||+.+|..||||
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvLls~~g~~KLCD  189 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVLLSADGNYKLCD  189 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheEEcCCCCEEeCc
Confidence               14678999999999999997664444 9999999999999999999999874 899999999999999999999999


Q ss_pred             cccccccccccccCCCc-cccccCCCCCCcccCChhhh---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh
Q 002719          671 FGISRFLSQNEISSNNT-TLCCRTDPKGTFAYMDPEFL---ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD  746 (888)
Q Consensus       671 FGla~~~~~~~~~~~~~-~~~~~~~~~Gt~~Y~APE~l---~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~  746 (888)
                      ||.+............. .....-...-|+.|+|||++   .+..++.|+|||+|||+||-|+....||+.....  ++.
T Consensus       190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aIl  267 (738)
T KOG1989|consen  190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AIL  267 (738)
T ss_pred             ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eEE
Confidence            99987543322111100 00000011258999999987   4568999999999999999999999999765322  222


Q ss_pred             hcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          747 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       747 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .+++..      +.+ ..++..+.+||..||+.||.+||++.+++..+.
T Consensus       268 ng~Y~~------P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  268 NGNYSF------PPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             eccccC------CCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence            222211      111 356788999999999999999999965554443

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.7e-36  Score=333.11  Aligned_cols=249  Identities=25%  Similarity=0.398  Sum_probs=189.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC-------CceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-------~~~~  597 (888)
                      +|.+.+.||+|+||.||+|...  +..||||.+....  ......+.+|+.+|+.++||||+++++++.       ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4788899999999999999875  5789999987532  223446889999999999999999999762       1478


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||+. ++|.+++.   ....+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 68988884   33468999999999999999999999   89999999999999999999999999999764


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh---------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD---------  746 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~---------  746 (888)
                      .......     .......||+.|+|||++.+  ..++.++|||||||++|+|+||++||...........         
T Consensus       154 ~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  228 (338)
T cd07859         154 FNDTPTA-----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPS  228 (338)
T ss_pred             ccccCcc-----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            3322111     11133468999999999876  6789999999999999999999999965443211100         


Q ss_pred             --------hcccc----cccC----CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          747 --------TGKLK----NLLD----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       747 --------~~~~~----~~ld----~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                              .....    .+..    +....++ ..+..+.+|+.+||+.||.+||++ +++
T Consensus       229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~-~e~  287 (338)
T cd07859         229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTA-EEA  287 (338)
T ss_pred             HHHHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCH-HHH
Confidence                    00000    0000    0000111 234568999999999999999999 444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.8e-36  Score=325.41  Aligned_cols=249  Identities=26%  Similarity=0.341  Sum_probs=191.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      .+|.+.++||.|+||.||+|...  +..||+|.+..... .....+.+|+.+++.++||||+++++++.  +..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46889999999999999999876  57899999875432 23456889999999999999999999874  468899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++ +|.+++...  ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.......
T Consensus        85 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          85 LDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             CCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            975 898888532  3457889999999999999999999   8999999999999999999999999999875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc------------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------  749 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~------------  749 (888)
                      .        .....|++.|+|||++.+ ..++.++|||||||++|+|+||++||..............            
T Consensus       159 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07871         159 T--------YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG  230 (288)
T ss_pred             c--------ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence            1        123358999999999875 4689999999999999999999999976543221111000            


Q ss_pred             ------cccccCCCC-C----CCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          750 ------LKNLLDPLA-G----DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       750 ------~~~~ld~~~-~----~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                            +.....+.. .    ......+..+.+|+.+||..||.+||++ +++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~-~~~  282 (288)
T cd07871         231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISA-EAA  282 (288)
T ss_pred             cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH-HHH
Confidence                  000000000 0    0011234678999999999999999998 444

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-36  Score=338.62  Aligned_cols=254  Identities=25%  Similarity=0.307  Sum_probs=199.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|...  +..||||++.....   .....+..|+.+|..++||||+++++++.  +..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            36889999999999999999987  68899999875421   23456889999999999999999999883  5789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...   ..+++..+..++.||+.||.|||.   +||+||||||+||||+.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            999999999999533   568999999999999999999999   89999999999999999999999999999866543


Q ss_pred             cccC---------------------CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch
Q 002719          681 EISS---------------------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK  739 (888)
Q Consensus       681 ~~~~---------------------~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~  739 (888)
                      ....                     ............||+.|+|||++.+..++.++|||||||+||+|++|++||....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence            2000                     0000011234569999999999999999999999999999999999999997665


Q ss_pred             HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC-hHHHHH
Q 002719          740 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE-LGKDVW  792 (888)
Q Consensus       740 ~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs-~~~~v~  792 (888)
                      ..............+.   .......+..+.+|+.+||. +|.+||+ + ++++
T Consensus       235 ~~~~~~~i~~~~~~~~---~p~~~~~~~~~~~li~~ll~-dp~~R~~s~-~~ll  283 (350)
T cd05573         235 LQETYNKIINWKESLR---FPPDPPVSPEAIDLICRLLC-DPEDRLGSF-EEIK  283 (350)
T ss_pred             HHHHHHHHhccCCccc---CCCCCCCCHHHHHHHHHHcc-ChhhcCCCH-HHHh
Confidence            4332222111111110   00011146789999999997 9999999 7 5553

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=7.4e-36  Score=323.34  Aligned_cols=253  Identities=24%  Similarity=0.426  Sum_probs=200.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT  597 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~  597 (888)
                      .+|.+.+.||+|+||.||+|.+.       +..||||.+...... ....+.+|+++|+.++||||+++++++  ....+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            46888889999999999999764       257999998765433 346799999999999999999999988  35789


Q ss_pred             EEEEecCCCChhhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          598 LVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      +||||+++++|.+++....           ....+++..+..++.|++.||.|||+   +|++||||||+|||++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence            9999999999999996432           13458899999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL  745 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~  745 (888)
                      ||+|||++..........      ......+++.|+|||++.++.++.++|||||||++|+|++ |..||..........
T Consensus       162 kl~d~g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~  235 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE  235 (280)
T ss_pred             EECCcccceecccCccee------cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999987543322111      0122346789999999999999999999999999999998 999986544322111


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ...  ...    ....+...+..+.+++.+||..||.+||++ +++++.|+
T Consensus       236 ~~~--~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~eil~~l~  279 (280)
T cd05049         236 CIT--QGR----LLQRPRTCPSEVYDIMLGCWKRDPQQRINI-KDIHERLQ  279 (280)
T ss_pred             HHH--cCC----cCCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHhh
Confidence            111  111    111223345789999999999999999999 77777664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=3.5e-36  Score=322.47  Aligned_cols=253  Identities=26%  Similarity=0.490  Sum_probs=206.1

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ...+|.+.++||.|+||.||+|.+. +..|++|.+..........+..|+.+++.++||||+++++++  .+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            3456888999999999999999886 477999999876655567899999999999999999999987  4568899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.+++.... ...+++..++.++.+++.||.|||+   +||+|+||||+|||++.++.+||+|||++........
T Consensus        84 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          84 MEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             cccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence            99999999996432 3568999999999999999999999   8999999999999999999999999999976543221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      .        .....++..|+|||.+....++.++||||||+++|+|++ |+.||.............      .......
T Consensus       160 ~--------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~------~~~~~~~  225 (261)
T cd05148         160 L--------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT------AGYRMPC  225 (261)
T ss_pred             c--------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH------hCCcCCC
Confidence            1        112346778999999988899999999999999999998 899997554322211111      1111122


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      +...+..+.+++.+||..+|.+||++ .++.+.|+.
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~-~~l~~~L~~  260 (261)
T cd05148         226 PAKCPQEIYKIMLECWAAEPEDRPSF-KALREELDN  260 (261)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHhc
Confidence            34556789999999999999999999 788887764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.4e-35  Score=326.14  Aligned_cols=248  Identities=26%  Similarity=0.363  Sum_probs=189.8

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .++|.+.+.||.|+||.||+|...  ++.||||++...... ....+.+|+.+++.++||||+++++++  .+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999885  678999998754322 234678999999999999999999988  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+. ++|.+++...  ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++.......
T Consensus        84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          84 YVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS  157 (303)
T ss_pred             CCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence            995 6787777432  3458889999999999999999999   899999999999999999999999999987543221


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc--cc-------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--LK-------  751 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~--~~-------  751 (888)
                      ..        .....||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.........+....  +.       
T Consensus       158 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  229 (303)
T cd07869         158 HT--------YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTW  229 (303)
T ss_pred             cc--------CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhc
Confidence            11        123458999999999875 4588999999999999999999999976543222111100  00       


Q ss_pred             ----c--ccCCC--CCCCC---------hhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          752 ----N--LLDPL--AGDWP---------FVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       752 ----~--~ld~~--~~~~p---------~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                          .  ...+.  ....+         ...+..+.+|+.+||+.||.+||++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~  283 (303)
T cd07869         230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ  283 (303)
T ss_pred             cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH
Confidence                0  00000  00000         01235688999999999999999983

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=8.5e-36  Score=319.73  Aligned_cols=251  Identities=25%  Similarity=0.446  Sum_probs=201.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      ++|.+.++||+|+||.||+|... +..||+|.+.... ...+.+.+|+.+++.++||||+++++++  .+..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            46888999999999999999876 4679999886543 2356789999999999999999999887  346889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|.+++... ....+++..++.++.+++.||.|||+   ++++||||||+||+++.++.+||+|||++......... 
T Consensus        85 ~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-  159 (261)
T cd05072          85 KGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-  159 (261)
T ss_pred             CCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence            99999998543 23468889999999999999999999   89999999999999999999999999999876432211 


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                            ......++..|+|||++..+.++.++|||||||++|+|+| |..||...............  ...+    .+.
T Consensus       160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--~~~~----~~~  227 (261)
T cd05072         160 ------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG--YRMP----RME  227 (261)
T ss_pred             ------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC--CCCC----CCC
Confidence                  1122346778999999998899999999999999999998 99999754432221111110  0111    112


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+..+.+++.+||..+|++||++ +++.+.|+.
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~  260 (261)
T cd05072         228 NCPDELYDIMKTCWKEKAEERPTF-DYLQSVLDD  260 (261)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCH-HHHHHHHhc
Confidence            345789999999999999999999 888888875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-36  Score=342.92  Aligned_cols=259  Identities=28%  Similarity=0.433  Sum_probs=206.5

Q ss_pred             hhhcCCCCccceeeecCceEEEEEEECC-----eE-EEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQ-VAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--  592 (888)
Q Consensus       524 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~-VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--  592 (888)
                      +-..++-...++||+|+||.||+|.+.-     .. ||||..+...   .....+|.+|+++|++++|||||++||++  
T Consensus       153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~  232 (474)
T KOG0194|consen  153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL  232 (474)
T ss_pred             EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence            3344455666899999999999998752     23 8999988532   23356799999999999999999999987  


Q ss_pred             CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccc
Q 002719          593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       593 ~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFG  672 (888)
                      ...++||||+|+||+|.++|.+..  ..++..+++.++.++|.||.|||+   +++|||||-..|+|++.++.+||+|||
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFG  307 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFG  307 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccc
Confidence            457899999999999999996443  259999999999999999999999   899999999999999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccc
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      +++.-.......        ..-.-...|+|||.+..+.|+.++|||||||++||+++ |..||.+....+......   
T Consensus       308 Ls~~~~~~~~~~--------~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~---  376 (474)
T KOG0194|consen  308 LSRAGSQYVMKK--------FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV---  376 (474)
T ss_pred             cccCCcceeecc--------ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH---
Confidence            987543211111        01124678999999999999999999999999999999 888997766543222210   


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccccc
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~  801 (888)
                        ........|...+..+..++.+||..+|++||+| ..+.+.|+.+...
T Consensus       377 --~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm-~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  377 --KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTM-STIKKKLEALEKK  423 (474)
T ss_pred             --hcCccCCCCCCCHHHHHHHHHHhccCChhhccCH-HHHHHHHHHHHhc
Confidence              1111223344667889999999999999999999 7888888777544

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.1e-36  Score=333.83  Aligned_cols=232  Identities=27%  Similarity=0.353  Sum_probs=187.2

Q ss_pred             ceeeecCceEEEEEEE-----CCeEEEEEEecCCC----CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          534 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~-----~~~~VAIK~l~~~~----~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +.||+|+||.||++..     .++.||||++....    ......+.+|+.+|+.++||||++++++|  .+..|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999875     35789999987532    12234578899999999999999999988  3468999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.......
T Consensus        82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (323)
T cd05584          82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT  155 (323)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence            999999998843   3457888999999999999999999   8999999999999999999999999999874322211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....||+.|+|||++.+..++.++|||||||+||+|++|++||..............      . ....|
T Consensus       156 ~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~------~-~~~~~  220 (323)
T cd05584         156 V--------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK------G-KLNLP  220 (323)
T ss_pred             c--------ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc------C-CCCCC
Confidence            1        1234589999999999988899999999999999999999999976654332211111      0 11234


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ...+..+.+|+.+||+.+|.+||+
T Consensus       221 ~~~~~~~~~li~~~l~~~p~~R~~  244 (323)
T cd05584         221 PYLTPEARDLLKKLLKRNPSSRLG  244 (323)
T ss_pred             CCCCHHHHHHHHHHcccCHhHcCC
Confidence            445678999999999999999993

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=7.8e-36  Score=349.86  Aligned_cols=255  Identities=21%  Similarity=0.277  Sum_probs=203.1

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccCC--
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE--  594 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--  594 (888)
                      .++....++|.+.+.||+|+||+||+|...  +..||||++......  ....+.+|+.+|..++|+||+++++.+..  
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            344556789999999999999999999764  688999998764332  23468899999999999999999876521  


Q ss_pred             --------ceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          595 --------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       595 --------~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                              ..++||||+++|+|.++|... .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~  181 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGL  181 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCC
Confidence                    257999999999999998643 234578999999999999999999999   89999999999999999999


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL  745 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~  745 (888)
                      +||+|||+++.+........      .....||+.|+|||++.+..++.++|||||||+||+|++|+.||..........
T Consensus       182 vkL~DFGls~~~~~~~~~~~------~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~  255 (496)
T PTZ00283        182 VKLGDFGFSKMYAATVSDDV------GRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH  255 (496)
T ss_pred             EEEEecccCeeccccccccc------cccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            99999999986543221111      123459999999999999999999999999999999999999997655432211


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      ..  ......    ..|...+..+.+|+.+||..+|.+||++.+.
T Consensus       256 ~~--~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~el  294 (496)
T PTZ00283        256 KT--LAGRYD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKL  294 (496)
T ss_pred             HH--hcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            11  111111    2234456789999999999999999999443

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.1e-35  Score=319.55  Aligned_cols=252  Identities=26%  Similarity=0.471  Sum_probs=201.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .+|.+.+.||+|+||.||+|.+.  ++.||+|.+.... .....+.+|+.+++.++||||++++++|  .+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            35778889999999999999876  5789999987532 3356789999999999999999999988  45688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++.... ...+++..++.++.|++.||.|||+   ++++||||||+|||++.++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999999985432 3458999999999999999999999   89999999999999999999999999999865433211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .       .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||.............      .......+
T Consensus       161 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~------~~~~~~~~  227 (263)
T cd05052         161 A-------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------KGYRMERP  227 (263)
T ss_pred             c-------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH------CCCCCCCC
Confidence            1       111234678999999998999999999999999999998 999997644322211110      01112234


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ...+..+.+++.+||..+|.+||++ .++.+.|+.+
T Consensus       228 ~~~~~~~~~li~~cl~~~p~~Rp~~-~~l~~~l~~~  262 (263)
T cd05052         228 EGCPPKVYELMRACWQWNPSDRPSF-AEIHQAFETM  262 (263)
T ss_pred             CCCCHHHHHHHHHHccCCcccCCCH-HHHHHHHHhh
Confidence            4456789999999999999999999 7787777653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.3e-35  Score=317.96  Aligned_cols=243  Identities=25%  Similarity=0.446  Sum_probs=194.0

Q ss_pred             eeeecCceEEEEEEEC----CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||+|.+.    +..||+|++......  ..+.+.+|+.+++.++||||++++|++. +.+++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            5899999999999763    477999998754322  2457889999999999999999999884 56789999999999


Q ss_pred             hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      |.+++..   ...+++..+..++.|++.||.|||+   +||+||||||.|||++.++.+||+|||++............ 
T Consensus        82 L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~-  154 (257)
T cd05116          82 LNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA-  154 (257)
T ss_pred             HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee-
Confidence            9999843   3468999999999999999999999   89999999999999999999999999999866433211100 


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChh
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                          .....++..|+|||.+....++.++|||||||++|||++ |.+||.......  ..+..+.        ....|..
T Consensus       155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~--------~~~~~~~  222 (257)
T cd05116         155 ----KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE--------RMECPQR  222 (257)
T ss_pred             ----cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC--------CCCCCCC
Confidence                112235679999999988889999999999999999998 999997544322  1122111        1123444


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .+..+.+|+.+||+.||.+||++ ..|...|+.
T Consensus       223 ~~~~l~~li~~~~~~~p~~Rp~~-~~i~~~l~~  254 (257)
T cd05116         223 CPPEMYDLMKLCWTYGVDERPGF-AVVELRLRN  254 (257)
T ss_pred             CCHHHHHHHHHHhccCchhCcCH-HHHHHHHhc
Confidence            56789999999999999999999 677666653

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.1e-35  Score=324.15  Aligned_cols=247  Identities=27%  Similarity=0.385  Sum_probs=189.7

Q ss_pred             CCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCC--ChhHHHHHHHHHHhc---CCCCeeeeecccC-------
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACP-------  593 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l---~HpnIv~l~g~~~-------  593 (888)
                      +|.+.+.||+|+||.||+|...   +..||+|.+......  ....+.+|+.+++.+   +||||++++++|.       
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            6888999999999999999873   467999998754322  234567788887776   6999999999872       


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...++||||+. ++|.+++.... ...+++..++.++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence            35789999996 68988885432 3458999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      +.......         ......||+.|+|||.+.+..++.++|||||||++|+|++|++||..................
T Consensus       157 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~  227 (290)
T cd07862         157 ARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  227 (290)
T ss_pred             eEeccCCc---------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence            97654321         112345899999999999889999999999999999999999999865543322111100000


Q ss_pred             ----------------cCCCCC----CCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          754 ----------------LDPLAG----DWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       754 ----------------ld~~~~----~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                      +.+...    .+....+..+.+|+.+||+.||++||++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~  283 (290)
T cd07862         228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  283 (290)
T ss_pred             CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence                            000000    001123467889999999999999999943

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8e-36  Score=325.44  Aligned_cols=255  Identities=24%  Similarity=0.469  Sum_probs=203.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      ++|.+.+.||+|+||.||++...       +..+|+|.+..........+.+|+.++++++||||++++++|.  +..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            46888899999999999999752       2458999887654444567899999999999999999999883  57899


Q ss_pred             EEEecCCCChhhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceee
Q 002719          599 VYEYLPNGSLEDRLSCKD----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL  668 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL  668 (888)
                      ||||+++++|.+++....          ....+++..++.++.|++.||.|||+   +|++||||||+|||++.++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence            999999999999985322          22358999999999999999999999   89999999999999999999999


Q ss_pred             eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHH--HH
Q 002719          669 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--AL  745 (888)
Q Consensus       669 ~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~--~~  745 (888)
                      +|||++.........      .......++..|+|||++.+..++.++|||||||++|+|++ |.+||........  .+
T Consensus       162 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i  235 (288)
T cd05093         162 GDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI  235 (288)
T ss_pred             ccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999998865432211      11122346788999999998899999999999999999998 9999975543221  11


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      ..+..    .    ..+...+..+.+|+.+||+.+|.+||++ +++...|+.+..
T Consensus       236 ~~~~~----~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~v~~~l~~~~~  281 (288)
T cd05093         236 TQGRV----L----QRPRTCPKEVYDLMLGCWQREPHMRLNI-KEIHSLLQNLAK  281 (288)
T ss_pred             HcCCc----C----CCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHHHHH
Confidence            12111    1    1122345679999999999999999999 788888887754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=8.4e-36  Score=340.53  Aligned_cols=260  Identities=23%  Similarity=0.366  Sum_probs=202.4

Q ss_pred             hhhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcC-CCCeeeeecccC-
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP-  593 (888)
Q Consensus       524 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~-  593 (888)
                      ....++|.+.++||+|+||.||+|.+.+       ..||||++...... ....+.+|+.+|+++. ||||++++++|. 
T Consensus        33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~  112 (400)
T cd05105          33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK  112 (400)
T ss_pred             eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence            3445688899999999999999998642       36999999754332 2457899999999996 999999999984 


Q ss_pred             -CceEEEEEecCCCChhhhhhccC--------------------------------------------------------
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKD--------------------------------------------------------  616 (888)
Q Consensus       594 -~~~~LV~Ey~~ggsL~~~L~~~~--------------------------------------------------------  616 (888)
                       +..+||||||++|+|.++|....                                                        
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (400)
T cd05105         113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML  192 (400)
T ss_pred             CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence             46899999999999999885421                                                        


Q ss_pred             -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEE
Q 002719          617 -------------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL  659 (888)
Q Consensus       617 -------------------------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NIL  659 (888)
                                                           ....+++..++.++.|++.||.|||+   ++|+||||||+|||
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nil  269 (400)
T cd05105         193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVL  269 (400)
T ss_pred             hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEE
Confidence                                                 01347888999999999999999999   89999999999999


Q ss_pred             EcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCc
Q 002719          660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT  738 (888)
Q Consensus       660 l~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~  738 (888)
                      ++.++.+||+|||+++.........      ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus       270 l~~~~~~kL~DfGla~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~  343 (400)
T cd05105         270 LAQGKIVKICDFGLARDIMHDSNYV------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM  343 (400)
T ss_pred             EeCCCEEEEEeCCcceecccccccc------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence            9999999999999998654322110      1122346788999999998899999999999999999997 99998653


Q ss_pred             hHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          739 KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       739 ~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..........  ..   ......+...+..+.+++.+||+.+|.+||++ ..|.++|+.+
T Consensus       344 ~~~~~~~~~~--~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-~~l~~~l~~l  397 (400)
T cd05105         344 IVDSTFYNKI--KS---GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSF-LHLSDIVESL  397 (400)
T ss_pred             chhHHHHHHH--hc---CCCCCCCccCCHHHHHHHHHHCccCHhHCcCH-HHHHHHHHHH
Confidence            2211111110  00   01111233445789999999999999999999 7788888765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.2e-36  Score=334.80  Aligned_cols=239  Identities=23%  Similarity=0.294  Sum_probs=192.0

Q ss_pred             CCCccceeeecCceEEEEEEECC--eEEEEEEecCCC---CCChhHHHHHHHHHHhcCCC-Ceeeeeccc--CCceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHP-NLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~Hp-nIv~l~g~~--~~~~~LV~  600 (888)
                      +|.+.+.||+|+||.||+|...+  ..||||++....   ......+..|+.++..+.|+ +|+++++++  .+..|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            47888999999999999998864  689999987542   22345678899999999765 577888876  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++......
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            99999999998843   3458899999999999999999999   89999999999999999999999999998643211


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...        .....||+.|+|||++.+..++.++|||||||++|+|+||++||..............       ....
T Consensus       155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~-------~~~~  219 (324)
T cd05587         155 GKT--------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME-------HNVS  219 (324)
T ss_pred             CCc--------eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc-------CCCC
Confidence            110        1223589999999999999999999999999999999999999976554332211111       1122


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      +|...+..+.+|+.+||..||.+||+..
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (324)
T cd05587         220 YPKSLSKEAVSICKGLLTKHPAKRLGCG  247 (324)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            3445567899999999999999999863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=4.1e-36  Score=333.86  Aligned_cols=236  Identities=22%  Similarity=0.268  Sum_probs=188.8

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHH---HhcCCCCeeeeeccc--CCceEEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDIL---SKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL---~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      |.+.+.||+|+||.||+|.+.  ++.||||++....   ......+.+|+.++   +.++||||+++++++  .+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            567889999999999999876  5789999997542   12234567777665   456799999999988  4578999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|..++.    ...+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.....
T Consensus        81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence            99999999998873    2458999999999999999999999   8999999999999999999999999999864322


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ...        ......|++.|+|||++.+..++.++|||||||++|+|++|++||...............       ..
T Consensus       154 ~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-------~~  218 (324)
T cd05589         154 FGD--------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND-------EV  218 (324)
T ss_pred             CCC--------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------CC
Confidence            111        112345899999999999999999999999999999999999999765543322111110       11


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .+|...+..+.+++.+||..||.+||+.
T Consensus       219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         219 RYPRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence            2334456789999999999999999964

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-35  Score=316.65  Aligned_cols=252  Identities=27%  Similarity=0.464  Sum_probs=202.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      ..+|.+.+.||+|+||.||+|.+. ++.||+|.+.... .....+.+|+.++++++||||+++++++.  ...++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            456888999999999999999875 4679999987543 33567999999999999999999999883  4689999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++.... ...+++..+..++.+++.||.|||+   +||+||||||+||+++.++.+||+|||++.........
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence            9999999985433 3468999999999999999999999   89999999999999999999999999999876532111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .       .....++..|+|||++.+..++.++||||||+++|+|+| |+.||.................      ...+
T Consensus       160 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------~~~~  226 (261)
T cd05068         160 A-------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR------MPCP  226 (261)
T ss_pred             c-------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------CCCC
Confidence            0       011223468999999998899999999999999999999 9999976543322211111100      1122


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ...+..+.+++.+||+.+|.+||++ +.+...|+.
T Consensus       227 ~~~~~~~~~li~~~l~~~P~~Rp~~-~~l~~~l~~  260 (261)
T cd05068         227 PGCPKELYDIMLDCWKEDPDDRPTF-ETLQWKLED  260 (261)
T ss_pred             CcCCHHHHHHHHHHhhcCcccCCCH-HHHHHHHhc
Confidence            3345789999999999999999999 777777764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-36  Score=323.20  Aligned_cols=247  Identities=26%  Similarity=0.382  Sum_probs=194.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc----CC---ceEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PE---VWTL  598 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~----~~---~~~L  598 (888)
                      -.|...+++|.|+||.||+|...  +..||||..-...    +--.+|+.+|+.++|||||+|+.+|    +.   ...|
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            35778889999999999999886  4789999876433    2345799999999999999998877    12   3458


Q ss_pred             EEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeeccccccc
Q 002719          599 VYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRF  676 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~  676 (888)
                      ||||+|. +|...++.. ..+..++.-.+.-+..||++||.|||.   .||+||||||.|||+|.+ |.+||||||.|+.
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            9999975 888888542 335668888899999999999999999   899999999999999976 9999999999998


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      +..+....  ..       ..|..|.|||.+.+. .|+.+.||||.||++.||+-|+|.|.+.+..+.....-++.....
T Consensus       176 L~~~epni--SY-------icSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt  246 (364)
T KOG0658|consen  176 LVKGEPNI--SY-------ICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT  246 (364)
T ss_pred             eccCCCce--eE-------EEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence            87654331  11       248899999999875 799999999999999999999999988766555443222111100


Q ss_pred             ----------------C--CCCC----CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 ----------------P--LAGD----WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ----------------~--~~~~----~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                      +  ....    +....+.++.+|+.++|.++|.+|.+..+.+
T Consensus       247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l  304 (364)
T KOG0658|consen  247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL  304 (364)
T ss_pred             HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence                            0  0111    2334567899999999999999999985544

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.4e-35  Score=317.80  Aligned_cols=247  Identities=26%  Similarity=0.463  Sum_probs=197.1

Q ss_pred             CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN  605 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~g  605 (888)
                      +|.+...||+|+||.||.|.+.+ ..||||.+.... .....+.+|+.++++++||||++++++|.  +..++||||+.+
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            57788899999999999998875 469999887543 33567999999999999999999999884  467899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.+++...  ...+++..++.++.|++.||.|||+   +|++|+||||.|||++.++.+||+|||+++......... 
T Consensus        84 ~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~-  157 (256)
T cd05113          84 GCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS-  157 (256)
T ss_pred             CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceee-
Confidence            9999998543  2368999999999999999999999   899999999999999999999999999987654322110 


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            .....++..|+|||.+.+..++.++|||||||++|+|++ |..||..............  ..    ....+..
T Consensus       158 ------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~----~~~~~~~  225 (256)
T cd05113         158 ------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GL----RLYRPHL  225 (256)
T ss_pred             ------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CC----CCCCCCC
Confidence                  112236678999999988889999999999999999998 9999975543322111111  00    1112223


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .+..+.+++.+||+.+|.+||++ .+++..|
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rp~~-~~ll~~~  255 (256)
T cd05113         226 ASEKVYAIMYSCWHEKAEERPTF-QQLLSSI  255 (256)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCH-HHHHHhh
Confidence            45789999999999999999999 6665544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.1e-35  Score=317.58  Aligned_cols=257  Identities=26%  Similarity=0.403  Sum_probs=202.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|...  +..||||.+.......   ...+.+|+.+++.++||||+++++++  .+..++||
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            47889999999999999999874  6889999886533222   34688999999999999999999987  45788999


Q ss_pred             EecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          601 EYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ||+++|+|.+++.... ....+++..++.++.|++.||.|||+   ++++|+||||+|||++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999998885332 23458899999999999999999999   8999999999999999999999999999886643


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....        .....|++.|+|||.+.+..++.++|+||||+++|+|++|+.||............ .+.....+  .
T Consensus       159 ~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~  227 (267)
T cd08228         159 KTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ-KIEQCDYP--P  227 (267)
T ss_pred             hhHH--------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHH-HHhcCCCC--C
Confidence            2211        12235889999999998888999999999999999999999998543221111110 01110011  1


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      ..+...+..+.+++.+||..+|.+||++ .++++.|+.++
T Consensus       228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~vl~~~~~~~  266 (267)
T cd08228         228 LPTEHYSEKLRELVSMCIYPDPDQRPDI-GYVHQIAKQMH  266 (267)
T ss_pred             CChhhcCHHHHHHHHHHCCCCcccCcCH-HHHHHHHHHhc
Confidence            1122345779999999999999999999 88888887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.5e-35  Score=322.13  Aligned_cols=250  Identities=27%  Similarity=0.435  Sum_probs=196.9

Q ss_pred             CCCccceeeecCceEEEEEEE------CCeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~------~~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      +|++.+.||+|+||.||+|.+      .+..|++|.+...... ....+.+|+.+++.++||||+++++++  .+..++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   85 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML   85 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence            577888999999999999975      2367999998754322 235688999999999999999999987  3578999


Q ss_pred             EEecCCCChhhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          600 YEYLPNGSLEDRLSCKD--------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~--------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      |||+++++|.+++....              ....+++..++.++.|++.||.|||+   ++++||||||+|||++.++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCc
Confidence            99999999999985321              12357888999999999999999999   89999999999999999999


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--  742 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--  742 (888)
                      +||+|||++...........      .....++..|+|||++.++.++.++|||||||++|+|++ |.+||.......  
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~  236 (283)
T cd05090         163 VKISDLGLSREIYSADYYRV------QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI  236 (283)
T ss_pred             EEeccccccccccCCcceec------ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            99999999986543321111      122335778999999988899999999999999999998 999996544321  


Q ss_pred             HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          743 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       743 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      .......   .     ...+...+..+.+++.+||+.+|.+||++ ..+.+.|.
T Consensus       237 ~~~~~~~---~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~  281 (283)
T cd05090         237 EMVRKRQ---L-----LPCSEDCPPRMYSLMTECWQEGPSRRPRF-KDIHTRLR  281 (283)
T ss_pred             HHHHcCC---c-----CCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHhh
Confidence            1111111   1     11233445789999999999999999999 66766664

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.1e-35  Score=324.77  Aligned_cols=255  Identities=25%  Similarity=0.504  Sum_probs=203.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      .+|.+...||+|+||.||+|...       ...|++|.+..........+.+|+.++++++||||+++++++.  +..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            35777889999999999999753       2458999987655444567999999999999999999999984  46899


Q ss_pred             EEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          599 VYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      ||||+++++|.+++....             ....+++..++.++.||+.||.|||+   +||+||||||+|||++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            999999999999985432             12358999999999999999999999   89999999999999999999


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHH-
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY-  743 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~-  743 (888)
                      ++|+|||++..........      ......++..|+|||++.+..++.++|||||||++|+|+| |.+||........ 
T Consensus       162 ~~l~dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  235 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI  235 (291)
T ss_pred             EEECCCCcccccCCCceee------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999987654322111      1123346889999999999999999999999999999999 9999865443221 


Q ss_pred             -HHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          744 -ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       744 -~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                       ....+.        ....+...+..+.+++.+||+.+|.+||++ .+|++.|+.+..
T Consensus       236 ~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~v~~~l~~~~~  284 (291)
T cd05094         236 ECITQGR--------VLERPRVCPKEVYDIMLGCWQREPQQRLNI-KEIYKILHALGK  284 (291)
T ss_pred             HHHhCCC--------CCCCCccCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHh
Confidence             111111        111233345789999999999999999999 888888887743

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=6.3e-36  Score=332.22  Aligned_cols=238  Identities=21%  Similarity=0.296  Sum_probs=191.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      +|.+.+.||+|+||.||+|...  +..||||++.....   .....+..|..++..+ +||+|+++++++  .+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4788899999999999999886  46899999876432   2234567788888877 589999999887  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.....
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            99999999998843   3458899999999999999999999   89999999999999999999999999998754321


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...        .....||+.|+|||++.+..++.++|||||||++|+|+||++||..............       ....
T Consensus       155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~-------~~~~  219 (323)
T cd05616         155 GVT--------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-------HNVA  219 (323)
T ss_pred             CCc--------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCCC
Confidence            111        1234589999999999999999999999999999999999999976654332211111       1112


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +|...+..+.+|+.+||+.+|.+|++.
T Consensus       220 ~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         220 YPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            344556789999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=318.09  Aligned_cols=253  Identities=27%  Similarity=0.431  Sum_probs=200.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      ++|.+...||+|+||.||+|.+.     ...||||.+...... ....|.+|+.+++.++||||+++++++  .+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            46888999999999999999875     247999998754322 235688999999999999999999987  3468899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++++|.+++...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.++|+|||++..+..
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          84 TEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            9999999999998543  2468999999999999999999999   8999999999999999999999999999987752


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ......      .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...............  ...   
T Consensus       159 ~~~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~--~~~---  227 (266)
T cd05033         159 SEATYT------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG--YRL---  227 (266)
T ss_pred             ccccee------ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC--CCC---
Confidence            111100      112235678999999998899999999999999999998 99999654433221111110  011   


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                       ..+...+..+.+|+.+||+.+|.+||++ .++++.|+.+
T Consensus       228 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~-~ei~~~l~~~  265 (266)
T cd05033         228 -PPPMDCPSALYQLMLDCWQKDRNERPTF-SQIVSTLDKM  265 (266)
T ss_pred             -CCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence             1233445789999999999999999999 7888877654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=4.5e-35  Score=314.46  Aligned_cols=256  Identities=29%  Similarity=0.442  Sum_probs=203.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||+|...  +..||+|.++....   .....+.+|+.++++++|+||+++++++  .+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57889999999999999999886  68899998864322   2245789999999999999999999988  34688999


Q ss_pred             EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ||+++|+|..++... .....+++..++.++.+++.||.|||+   .||+||||+|+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            999999999988543 234568999999999999999999999   8999999999999999999999999999876543


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....        .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||....................+   
T Consensus       159 ~~~~--------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---  227 (267)
T cd08224         159 KTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP---  227 (267)
T ss_pred             CCcc--------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC---
Confidence            2211        11234789999999999888999999999999999999999999543321111111000111111   


Q ss_pred             CCCh-hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          760 DWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       760 ~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                       .|. ..+..+.+++.+||..+|.+||++ ..|+++|+.+.
T Consensus       228 -~~~~~~~~~~~~~i~~cl~~~p~~Rp~~-~~il~~~~~~~  266 (267)
T cd08224         228 -LPADHYSEELRDLVSRCINPDPEKRPDI-SYVLQVAKEMH  266 (267)
T ss_pred             -CChhhcCHHHHHHHHHHcCCCcccCCCH-HHHHHHHHHhc
Confidence             122 345689999999999999999999 77888887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1e-35  Score=338.45  Aligned_cols=254  Identities=24%  Similarity=0.311  Sum_probs=192.8

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .|...+.||+|+||+||+|...  +..||||++......   ....+.+|+.+|+.++||||+++++++  .+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5888999999999999999875  578999999764322   234688999999999999999999998  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |++||+|.+++..   ...+++..+..++.||+.||.|||.   +||+||||||+||||+.++.+||+|||++..+....
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~  155 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH  155 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence            9999999999853   3458899999999999999999999   899999999999999999999999999986442111


Q ss_pred             ccCC---------------------------------------CccccccCCCCCCcccCChhhhccCCCCchhhHHHHH
Q 002719          682 ISSN---------------------------------------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG  722 (888)
Q Consensus       682 ~~~~---------------------------------------~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlG  722 (888)
                      ....                                       ....+......||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (381)
T cd05626         156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG  235 (381)
T ss_pred             ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence            0000                                       0000011234699999999999988999999999999


Q ss_pred             HHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH--HhhcCCCCCCChHHHHH
Q 002719          723 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR--CCEMSRKSRPELGKDVW  792 (888)
Q Consensus       723 viL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~--Cl~~dP~~RPs~~~~v~  792 (888)
                      |++|||+||.+||..................+   ........+..+.+|+.+  |+..+|..||++ .+++
T Consensus       236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~-~~~l  303 (381)
T cd05626         236 VILFEMLVGQPPFLAPTPTETQLKVINWENTL---HIPPQVKLSPEAVDLITKLCCSAEERLGRNGA-DDIK  303 (381)
T ss_pred             hHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---CCCCCCCCCHHHHHHHHHHccCcccccCCCCH-HHHh
Confidence            99999999999997655433222211111110   001111245678899988  445666679998 4443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=9e-36  Score=330.18  Aligned_cols=236  Identities=25%  Similarity=0.338  Sum_probs=188.2

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|.+.  +..||||++....   ......+..|..++..+ +||||+++++++  .+..++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            6999999999999886  4689999987642   22334567788888764 899999999988  45788999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++.........   
T Consensus        82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---  152 (316)
T cd05619          82 DLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK---  152 (316)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc---
Confidence            99999843   3468899999999999999999999   89999999999999999999999999998743221110   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|++|..||............. ..      ...+|...+
T Consensus       153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~-~~------~~~~~~~~~  220 (316)
T cd05619         153 -----TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR-MD------NPCYPRWLT  220 (316)
T ss_pred             -----eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hC------CCCCCccCC
Confidence                 122358999999999999899999999999999999999999997654332211111 11      111233455


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..+.+|+.+||+.||.+||++..++
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l  245 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDI  245 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHH
Confidence            7899999999999999999995444

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=6.6e-36  Score=331.19  Aligned_cols=238  Identities=23%  Similarity=0.280  Sum_probs=189.3

Q ss_pred             ceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      +.||+|+||.||+|.+.  +..||+|++....   ......+..|..++..+ +||||+++++++  .+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            36999999999999886  5789999987542   22344567788888764 899999999988  4578999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|..++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++.......   
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---  151 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN---  151 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC---
Confidence            999998843   3468899999999999999999999   8999999999999999999999999999864321110   


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                           ......||+.|+|||++.+..++.++|||||||++|+|++|+.||............ ..      .....|...
T Consensus       152 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~-~~------~~~~~~~~~  219 (316)
T cd05620         152 -----RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI-RV------DTPHYPRWI  219 (316)
T ss_pred             -----ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH-Hh------CCCCCCCCC
Confidence                 112345899999999999999999999999999999999999999765543221111 00      111233345


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      +..+.+|+.+||+.||.+||++.+++.
T Consensus       220 ~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         220 TKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            678999999999999999999854543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.8e-36  Score=320.25  Aligned_cols=250  Identities=26%  Similarity=0.289  Sum_probs=201.4

Q ss_pred             CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      +|...+.||.|.-|+||++..++  ..+|+|++.+.....   ..+.+.|-+||+.++||.++.||..|  ++..|||||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            56777889999999999999986  679999998765443   34577899999999999999999999  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      ||+||+|..+++ ++....|++..++.++.+++.||+|||.   .|||+|||||+||||-++|++-|+||.|+.......
T Consensus       158 yCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  158 YCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             cCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            999999998774 4556779999999999999999999999   899999999999999999999999999986432100


Q ss_pred             cc-----------------------------C-C------------------CccccccCCCCCCcccCChhhhccCCCC
Q 002719          682 IS-----------------------------S-N------------------NTTLCCRTDPKGTFAYMDPEFLASGELT  713 (888)
Q Consensus       682 ~~-----------------------------~-~------------------~~~~~~~~~~~Gt~~Y~APE~l~~~~~s  713 (888)
                      ..                             . .                  ..........+||-.|+|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence            00                             0 0                  0011223456899999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          714 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       714 ~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .++|+|+|||+||||+.|..||.+.+......+.-...    ...+..| ..+..+.+||.++|.+||.+|-..
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~----l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~  382 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQP----LKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGS  382 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCC----CcCCCCC-cchhHHHHHHHHHhccChhhhhcc
Confidence            99999999999999999999998776554433221111    1111222 445789999999999999999984

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.4e-35  Score=315.11  Aligned_cols=251  Identities=29%  Similarity=0.488  Sum_probs=201.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN  605 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~g  605 (888)
                      ++|++.++||+|+||.||+|... +..||+|.+..... ....+.+|+.++++++||||+++++++. ...++||||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~   84 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK   84 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence            46888999999999999999876 46799999876443 4567999999999999999999999874 467899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|.+++... ....+++..++.++.+++.||.|||+   ++++||||||+||+++.++.++|+|||++..+....... 
T Consensus        85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~-  159 (260)
T cd05070          85 GSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA-  159 (260)
T ss_pred             CcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc-
Confidence            9999998543 23458999999999999999999999   899999999999999999999999999998654322111 


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            .....++..|+|||++.+..++.++||||||+++|+|++ |.+||.............      .......+..
T Consensus       160 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~  227 (260)
T cd05070         160 ------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE------RGYRMPCPQD  227 (260)
T ss_pred             ------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH------cCCCCCCCCc
Confidence                  112235678999999988899999999999999999999 899997654332221111      0111123344


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .+..+.+|+.+||..+|.+||++ ..+.+.|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~~  259 (260)
T cd05070         228 CPISLHELMLQCWKKDPEERPTF-EYLQSFLED  259 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCH-HHHHHHHhc
Confidence            56789999999999999999999 677676653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.2e-35  Score=317.65  Aligned_cols=250  Identities=26%  Similarity=0.340  Sum_probs=195.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ..+|.+.+.||+|+||.||+|...  +..||+|++..........+.+|+.++++++||||+++++++  .+..++||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            347999999999999999999874  578999999765544556788999999999999999999987  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++..   ..++++..+..++.|++.||.|||+   +||+||||+|+||+++.++.+||+|||++..+.....
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence            999999998843   3468999999999999999999999   8999999999999999999999999999986542211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      .        .....|++.|+|||.+.   ...++.++|||||||++|+|++|++||..............  ..+.+...
T Consensus       162 ~--------~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~  231 (267)
T cd06646         162 K--------RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--SNFQPPKL  231 (267)
T ss_pred             c--------cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec--CCCCCCCC
Confidence            0        12235889999999884   34578899999999999999999999854332221111100  00111111


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                      ..+...+..+.+|+.+||..+|.+||++ +++++
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~-~~il~  264 (267)
T cd06646         232 KDKTKWSSTFHNFVKISLTKNPKKRPTA-ERLLT  264 (267)
T ss_pred             ccccccCHHHHHHHHHHhhCChhhCcCH-HHHhc
Confidence            1112235789999999999999999999 45543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=9.3e-36  Score=335.11  Aligned_cols=242  Identities=25%  Similarity=0.393  Sum_probs=185.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      +|...++||+|+||.||+|.+.  ++.||||++...... ....+.+|+.+|+.++|+||+++++++.  +..++||||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            3455678999999999999876  688999998654322 2356889999999999999999999884  4688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|....       .+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++..+......
T Consensus       155 ~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        155 DGGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             CCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            999986543       35567888999999999999999   89999999999999999999999999999865432111


Q ss_pred             CCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                              .....||..|+|||++..     ...+.++|||||||++|+|++|+.||................   ....
T Consensus       225 --------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~---~~~~  293 (353)
T PLN00034        225 --------CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC---MSQP  293 (353)
T ss_pred             --------ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh---ccCC
Confidence                    123458999999998843     234568999999999999999999997432211111000000   0011


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ...+...+..+.+|+.+||..||.+||++ .+++
T Consensus       294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~-~ell  326 (353)
T PLN00034        294 PEAPATASREFRHFISCCLQREPAKRWSA-MQLL  326 (353)
T ss_pred             CCCCCccCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence            12233455789999999999999999999 4443

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.3e-35  Score=318.35  Aligned_cols=252  Identities=23%  Similarity=0.413  Sum_probs=197.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC--Ce----EEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~----~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV  599 (888)
                      .+|.+.+.||+|+||.||+|.+.  +.    .|++|.+...... ....+..|+.++..++||||+++++++. ...+++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            35777889999999999999874  33    4788887543222 2346778888999999999999999884 457899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||+++|+|.+++...  ...+++..++.++.||+.||.|||+   ++++||||||+|||++.++.+||+|||+++.+..
T Consensus        87 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          87 TQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             EEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            9999999999999533  3468999999999999999999999   8999999999999999999999999999986543


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDP  756 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~  756 (888)
                      .....      ......++..|+|||.+.++.++.++|||||||++|||++ |..||.......  ..+..+..  .   
T Consensus       162 ~~~~~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~---  230 (279)
T cd05111         162 DDKKY------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER--L---  230 (279)
T ss_pred             CCccc------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc--C---
Confidence            22111      1123447789999999998999999999999999999998 999997654322  11221111  0   


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                         ..+...+..+..++.+||..+|.+||++ .++.+.|..+.
T Consensus       231 ---~~~~~~~~~~~~li~~c~~~~p~~Rps~-~el~~~l~~~~  269 (279)
T cd05111         231 ---AQPQICTIDVYMVMVKCWMIDENVRPTF-KELANEFTRMA  269 (279)
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHH
Confidence               1122334678999999999999999999 67777776654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=3.4e-35  Score=315.24  Aligned_cols=246  Identities=24%  Similarity=0.428  Sum_probs=194.4

Q ss_pred             eeeecCceEEEEEEEC----CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCCCCh
Q 002719          535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGSL  608 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~ggsL  608 (888)
                      .||+|+||.||+|.+.    +..||+|++...... ....+.+|+.++++++||||++++++|. +..++||||+++|+|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            3899999999999775    346999998765322 2356899999999999999999999984 467899999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++...  ...+++..++.++.|++.||.|||+   +|++||||||+|||++.++.+||+|||++...........   
T Consensus        82 ~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---  153 (257)
T cd05115          82 NKFLSGK--KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK---  153 (257)
T ss_pred             HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcccee---
Confidence            9998532  3468999999999999999999999   8999999999999999999999999999986543321111   


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                        ..+...+++.|+|||++.+..++.++|||||||++|+|++ |.+||...............      .....+...+.
T Consensus       154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~  225 (257)
T cd05115         154 --ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG------KRLDCPAECPP  225 (257)
T ss_pred             --ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC------CCCCCCCCCCH
Confidence              1122234678999999988889999999999999999996 99999755433221111110      11223445568


Q ss_pred             HHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          768 QLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .+.+++.+||..+|++||++ ..|.+.|+.
T Consensus       226 ~l~~li~~c~~~~~~~Rp~~-~~i~~~l~~  254 (257)
T cd05115         226 EMYALMKDCWIYKWEDRPNF-AKVEERMRT  254 (257)
T ss_pred             HHHHHHHHHcCCChhhCcCH-HHHHHHHhh
Confidence            89999999999999999999 777776654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=7e-36  Score=331.58  Aligned_cols=232  Identities=25%  Similarity=0.300  Sum_probs=187.8

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|...  ++.||||++....   ......+..|..++..+ +||||+++++++  .+..++||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            6999999999999876  5789999987532   22345677888888876 699999999988  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++.........   
T Consensus        82 ~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~---  152 (320)
T cd05590          82 DLMFHIQK---SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT---  152 (320)
T ss_pred             hHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc---
Confidence            99998843   3468999999999999999999999   89999999999999999999999999998753221111   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|++|++||.............  .     .....|...+
T Consensus       153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~--~-----~~~~~~~~~~  220 (320)
T cd05590         153 -----TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--N-----DEVVYPTWLS  220 (320)
T ss_pred             -----ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--c-----CCCCCCCCCC
Confidence                 123458999999999998899999999999999999999999997665433211110  0     0112233456


Q ss_pred             HHHHHHHHHHhhcCCCCCCCh
Q 002719          767 EQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..+.+|+.+||+.||.+||+.
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCC
Confidence            789999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.4e-35  Score=320.44  Aligned_cols=260  Identities=27%  Similarity=0.409  Sum_probs=198.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC----CceE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT  597 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~  597 (888)
                      .+|.+.+.||+|+||.||++.+.      +..||+|.+..........+.+|+.+|+.++||||+++++++.    ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            47888899999999999999752      5689999987655444567899999999999999999999762    3578


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||+++|+|.+++...  ...+++..++.++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++...
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            999999999999998532  3458999999999999999999999   89999999999999999999999999999876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH-HHhhcc-------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-ALDTGK-------  749 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~-------  749 (888)
                      .......     .......++..|+|||++.+..++.++|||||||++|||++|..++........ ......       
T Consensus       159 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05081         159 PQDKEYY-----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY  233 (284)
T ss_pred             cCCCcce-----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence            4322110     011122345679999999988999999999999999999998877643321110 000000       


Q ss_pred             -cccccC-CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          750 -LKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       750 -~~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                       +...+. ......+...+..+.+|+.+||..+|.+||++ ++|...|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~~  283 (284)
T cd05081         234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSF-SELALQVEAI  283 (284)
T ss_pred             HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHhc
Confidence             000000 00111123345789999999999999999999 7888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4e-36  Score=334.15  Aligned_cols=231  Identities=23%  Similarity=0.269  Sum_probs=185.9

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||++...  +..||+|++.....   .....+.+|+.++..++||||+++++++  .+..++||||+++|+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            5999999999999875  57899999976422   2234677899999999999999999887  457899999999999


Q ss_pred             hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      |..++.   ....+++..+..++.||+.||.|||+.  +||+||||||+|||++.++.+||+|||+++........    
T Consensus        82 L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~----  152 (325)
T cd05594          82 LFFHLS---RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----  152 (325)
T ss_pred             HHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc----
Confidence            998884   234689999999999999999999962  58999999999999999999999999998753221111    


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                          .....||+.|+|||++.+..++.++|||||||+||+|+||+.||.............       .....+|...+.
T Consensus       153 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~-------~~~~~~p~~~~~  221 (325)
T cd05594         153 ----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-------MEEIRFPRTLSP  221 (325)
T ss_pred             ----cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh-------cCCCCCCCCCCH
Confidence                122358999999999999999999999999999999999999997654322211110       011123444567


Q ss_pred             HHHHHHHHHhhcCCCCCC
Q 002719          768 QLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RP  785 (888)
                      .+.+|+.+||+.||.+|+
T Consensus       222 ~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         222 EAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             HHHHHHHHHhhcCHHHhC
Confidence            899999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.5e-35  Score=317.78  Aligned_cols=250  Identities=26%  Similarity=0.403  Sum_probs=195.1

Q ss_pred             CCccceeeecCceEEEEEEECC----eEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--------Cc
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------EV  595 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------~~  595 (888)
                      |.+.+.||+|+||.||+|.+..    ..||+|.+.....  .....+.+|+.+++.++||||++++++|.        ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3466789999999999998763    2599998875422  22456889999999999999999998762        13


Q ss_pred             eEEEEEecCCCChhhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFG  672 (888)
                      .++||||+++|+|.+++...   .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence            57999999999999887422   223458999999999999999999999   899999999999999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH--Hhhcc
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGK  749 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~--~~~~~  749 (888)
                      +++.+........      .....+++.|++||++.+..++.++|||||||++|+|++ |++||.........  +..+.
T Consensus       158 ~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  231 (272)
T cd05075         158 LSKKIYNGDYYRQ------GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN  231 (272)
T ss_pred             cccccCcccceec------CCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            9987643321110      112235778999999999899999999999999999999 89999754432211  11111


Q ss_pred             cccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       750 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .        ...+...+..+.+++.+||+.+|.+||++ .++++.|+.
T Consensus       232 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l~~  270 (272)
T cd05075         232 R--------LKQPPDCLDGLYSLMSSCWLLNPKDRPSF-ETLRCELEK  270 (272)
T ss_pred             C--------CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHh
Confidence            1        01122345679999999999999999999 777777765

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-35  Score=332.56  Aligned_cols=254  Identities=26%  Similarity=0.425  Sum_probs=199.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC---C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~---~  594 (888)
                      .++|.+.+.||+|+||.||+|...       ++.||+|++...... ....+.+|+.++.++ +||||++++++|.   .
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            347889999999999999999643       257999998754322 234577899999999 8999999999873   3


Q ss_pred             ceEEEEEecCCCChhhhhhccCC---------------------------------------------------------
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------  617 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~---------------------------------------------------------  617 (888)
                      ..+++|||+++|+|.+++.....                                                         
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            57899999999999998853211                                                         


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCC
Q 002719          618 -SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK  696 (888)
Q Consensus       618 -~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~  696 (888)
                       ..++++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++..+.......      ......
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~------~~~~~~  236 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RKGDAR  236 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh------hccCCC
Confidence             1268999999999999999999999   899999999999999999999999999998764322111      012234


Q ss_pred             CCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH---HHHhhcccccccCCCCCCCChhhHHHHHHH
Q 002719          697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ---YALDTGKLKNLLDPLAGDWPFVQAEQLANL  772 (888)
Q Consensus       697 Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~---~~~~~~~~~~~ld~~~~~~p~~~~~~l~~L  772 (888)
                      ++..|+|||++.+..++.++|||||||+||+|++ |.+||.......   ..+..+.        ....+...+..+.++
T Consensus       237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l  308 (337)
T cd05054         237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT--------RMRAPEYATPEIYSI  308 (337)
T ss_pred             CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC--------CCCCCccCCHHHHHH
Confidence            6788999999999999999999999999999998 999996532211   1111111        111123345789999


Q ss_pred             HHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          773 AMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       773 i~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      +.+||+.+|.+||++ .+|++.|+.+
T Consensus       309 ~~~cl~~~p~~RPs~-~ell~~l~~~  333 (337)
T cd05054         309 MLDCWHNNPEDRPTF-SELVEILGDL  333 (337)
T ss_pred             HHHHccCChhhCcCH-HHHHHHHHHH
Confidence            999999999999999 7888888765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=5.8e-36  Score=333.57  Aligned_cols=239  Identities=22%  Similarity=0.274  Sum_probs=185.8

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||++.+.  +..||||+++....   .....+..|..++..+ +||||++++++|  ....++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            6999999999999876  57899999976422   2234578899999998 799999999988  35689999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++........   
T Consensus        82 ~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~---  152 (329)
T cd05588          82 DLMFHMQR---QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT---  152 (329)
T ss_pred             CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCc---
Confidence            99988843   3469999999999999999999999   89999999999999999999999999998743211110   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChh
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.......  ...........+.......|..
T Consensus       153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (329)
T cd05588         153 -----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS  227 (329)
T ss_pred             -----cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC
Confidence                 123458999999999999999999999999999999999999996321100  0000000000000111123444


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCCh
Q 002719          765 QAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .+..+.+|+.+||+.||.+||+.
T Consensus       228 ~~~~~~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         228 LSVKASSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             CCHHHHHHHHHHhccCHHHcCCC
Confidence            56789999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.4e-35  Score=322.53  Aligned_cols=236  Identities=23%  Similarity=0.326  Sum_probs=188.2

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL  608 (888)
                      ||+|+||+||++...  +..||+|.+......   ....+..|+.+|+.++||||+++++++.  ...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999875  578999998654222   2345778999999999999999998873  468899999999999


Q ss_pred             hhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          609 EDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       609 ~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      .+++... .....+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..+......    
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----  153 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK----  153 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc----
Confidence            9887432 234579999999999999999999999   89999999999999999999999999998765432211    


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChhh
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......  ......    .+.. ...++...
T Consensus       154 ----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~~-~~~~~~~~  224 (280)
T cd05608         154 ----TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILND-SVTYPDKF  224 (280)
T ss_pred             ----ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hccc-CCCCcccC
Confidence                123458999999999999999999999999999999999999997543211  111111    1111 11234445


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCh
Q 002719          766 AEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +..+.+|+.+||+.||.+||++
T Consensus       225 ~~~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         225 SPASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             CHHHHHHHHHHhcCCHHHhcCC
Confidence            6789999999999999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.7e-35  Score=313.28  Aligned_cols=246  Identities=26%  Similarity=0.443  Sum_probs=198.9

Q ss_pred             CCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc---CCceEEEEEecC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLP  604 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~---~~~~~LV~Ey~~  604 (888)
                      .+|.+.+.||+|+||.||+|...+..||+|.+....  ....+.+|+.++++++|||++++++++   ....++||||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            368888999999999999999999999999986432  345789999999999999999999875   246889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.... ...+++..++.++.|++.||.|||+   +|++||||||+||+++.++.+||+|||++.......   
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---  156 (256)
T cd05082          84 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---  156 (256)
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence            999999985432 2458899999999999999999999   899999999999999999999999999987543221   


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              ....++..|+|||++.+..++.++|||||||++|+|++ |++||..............      ......+.
T Consensus       157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~  222 (256)
T cd05082         157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK------GYKMDAPD  222 (256)
T ss_pred             --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc------CCCCCCCC
Confidence                    11234678999999998899999999999999999997 9999965443221111100      01112233


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+..+.+++.+||..+|.+||++ .++.+.|+.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~~  255 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRPSF-LQLREQLEH  255 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCH-HHHHHHHhc
Confidence            456789999999999999999999 777777764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-35  Score=317.23  Aligned_cols=253  Identities=23%  Similarity=0.370  Sum_probs=198.2

Q ss_pred             CCccceeeecCceEEEEEEECC-----eEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC--C------
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--E------  594 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~------  594 (888)
                      |.+.+.||+|+||.||+|....     ..||+|.+......  ....+.+|+.+++.++||||+++++++.  +      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            5667889999999999998642     56999998754322  2356889999999999999999999762  1      


Q ss_pred             ceEEEEEecCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKD---NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                      ..++||||+++|+|..++....   ....+++..++.++.|++.||.|||+   ++++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence            3689999999999999885432   23468999999999999999999999   89999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL  750 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~  750 (888)
                      |+++.+........      .....++..|+|||.+.+..++.++|||||||++|||++ |.+||.............  
T Consensus       158 g~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~--  229 (273)
T cd05035         158 GLSKKIYSGDYYRQ------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR--  229 (273)
T ss_pred             cceeeccccccccc------cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--
Confidence            99986643321110      111235678999999988899999999999999999999 899997554332211111  


Q ss_pred             ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                          .......+...+..+.+++.+||+.||.+||++ .++.+.|+.+
T Consensus       230 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~e~~~~l~~~  272 (273)
T cd05035         230 ----HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTF-TKLREVLENI  272 (273)
T ss_pred             ----cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence                111112233456789999999999999999999 7777777654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-36  Score=337.99  Aligned_cols=251  Identities=22%  Similarity=0.273  Sum_probs=190.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||++...  +..||||++.....   .....+.+|+++|+.++||||++++++|.  +..|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            36888999999999999999875  57899999865321   22356888999999999999999999984  4789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~  154 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ  154 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence            99999999999853   3468899999999999999999999   89999999999999999999999999999643221


Q ss_pred             cccC--------CCcc-------------------------------ccccCCCCCCcccCChhhhccCCCCchhhHHHH
Q 002719          681 EISS--------NNTT-------------------------------LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSF  721 (888)
Q Consensus       681 ~~~~--------~~~~-------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSl  721 (888)
                      ....        ....                               ........||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  234 (377)
T cd05629         155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL  234 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence            1000        0000                               000012469999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCC---CChH
Q 002719          722 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR---PELG  788 (888)
Q Consensus       722 GviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~R---Ps~~  788 (888)
                      ||+||||+||.+||..................+.  .. .....+..+.+|+.+||. +|.+|   |++.
T Consensus       235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~  300 (377)
T cd05629         235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLY--FP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAH  300 (377)
T ss_pred             chhhhhhhcCCCCCCCCCHHHHHHHHHccCCccC--CC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence            9999999999999976554332211111111110  00 111245679999999997 77776   4773

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.1e-35  Score=330.07  Aligned_cols=231  Identities=26%  Similarity=0.348  Sum_probs=186.5

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|...  +..||||++....   ......+..|..++..+ +||||+++++++  .+..++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            5999999999999886  4689999987542   22234577899999876 799999999988  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.........   
T Consensus        82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---  152 (321)
T cd05591          82 DLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT---  152 (321)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc---
Confidence            99988843   3458899999999999999999999   89999999999999999999999999998753322111   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|++|++||.............. .      ...+|...+
T Consensus       153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~-~------~~~~p~~~~  220 (321)
T cd05591         153 -----TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH-D------DVLYPVWLS  220 (321)
T ss_pred             -----ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc-C------CCCCCCCCC
Confidence                 1234589999999999988999999999999999999999999986654332211111 0      111233455


Q ss_pred             HHHHHHHHHHhhcCCCCCCC
Q 002719          767 EQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ..+.+|+.+||+.||.+||+
T Consensus       221 ~~~~~ll~~~L~~dp~~R~~  240 (321)
T cd05591         221 KEAVSILKAFMTKNPNKRLG  240 (321)
T ss_pred             HHHHHHHHHHhccCHHHcCC
Confidence            78999999999999999994

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-36  Score=330.86  Aligned_cols=251  Identities=27%  Similarity=0.469  Sum_probs=206.3

Q ss_pred             CCccceeeecCceEEEEEEECC------eEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccCC-ceEEEEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYE  601 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-~~~LV~E  601 (888)
                      ....++||.|-||.||+|++..      -.||||..+.+. ..+.+.|..|.-+|++++|||||+|+|+|.+ ..+||||
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE  470 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME  470 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence            3456679999999999998863      249999988754 3446789999999999999999999999965 6789999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      .++-|.|..+|..+  ...|+......++.||+.||.|||+   ..+|||||...|||+.....+||+|||+++.+....
T Consensus       471 L~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  471 LAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA  545 (974)
T ss_pred             cccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence            99999999999644  4468889999999999999999999   889999999999999999999999999999987665


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ....       +...-.+-|||||.+.-..++.++|||.|||++||++. |..||.+....+-      +..+-......
T Consensus       546 yYka-------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV------I~~iEnGeRlP  612 (974)
T KOG4257|consen  546 YYKA-------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV------IGHIENGERLP  612 (974)
T ss_pred             hhhc-------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce------EEEecCCCCCC
Confidence            4322       22235678999999999999999999999999999976 9999965432221      11222233445


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      .|..+++.|+.|+.+||+++|.+||.+ .++...|..+.
T Consensus       613 ~P~nCPp~LYslmskcWayeP~kRPrf-tei~~~lsdv~  650 (974)
T KOG4257|consen  613 CPPNCPPALYSLMSKCWAYEPSKRPRF-TEIKAILSDVL  650 (974)
T ss_pred             CCCCCChHHHHHHHHHhccCcccCCcH-HHHHHHHHHHH
Confidence            677888999999999999999999999 66666665443

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.9e-35  Score=312.87  Aligned_cols=244  Identities=28%  Similarity=0.433  Sum_probs=191.5

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCChh
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLE  609 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL~  609 (888)
                      .||+|+||.||+|.+.  ++.||+|.+..... .....+.+|+++++.++||||++++++|  ....++||||+++++|.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL   81 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence            5999999999999874  68899998764322 2235689999999999999999999988  34688999999999999


Q ss_pred             hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccc
Q 002719          610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL  689 (888)
Q Consensus       610 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~  689 (888)
                      +++...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++...........    
T Consensus        82 ~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~----  152 (252)
T cd05084          82 TFLRTE--GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST----  152 (252)
T ss_pred             HHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCccccccccccc----
Confidence            998532  3468899999999999999999999   8999999999999999999999999999875432211100    


Q ss_pred             cccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 002719          690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ  768 (888)
Q Consensus       690 ~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~  768 (888)
                        .....++..|+|||.+.++.++.++|||||||++|+|++ |.+||..............      ......+...+..
T Consensus       153 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  224 (252)
T cd05084         153 --GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ------GVRLPCPELCPDA  224 (252)
T ss_pred             --CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc------CCCCCCcccCCHH
Confidence              011123567999999999999999999999999999998 8999864433221111111      0111233445678


Q ss_pred             HHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          769 LANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       769 l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      +.+|+.+||+.+|.+||++ .++.+.|+
T Consensus       225 ~~~li~~~l~~~p~~Rps~-~~~~~~l~  251 (252)
T cd05084         225 VYRLMERCWEYDPGQRPSF-STVHQELQ  251 (252)
T ss_pred             HHHHHHHHcCCChhhCcCH-HHHHHHHh
Confidence            9999999999999999999 77776664

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.9e-35  Score=334.00  Aligned_cols=254  Identities=22%  Similarity=0.318  Sum_probs=190.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|+..+.||+|+||+||++...  ++.||||++.....   .....+..|+.++..++||||+++++.+.  ...|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            36888999999999999999875  57899999975322   22346788999999999999999999884  4689999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            99999999999853   3568999999999999999999999   89999999999999999999999999999765321


Q ss_pred             cccCCC---------------------------ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Q 002719          681 EISSNN---------------------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP  733 (888)
Q Consensus       681 ~~~~~~---------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~  733 (888)
                      ......                           ..........||+.|+|||++.+..++.++|||||||+||+|++|++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~  234 (363)
T cd05628         155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (363)
T ss_pred             ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence            100000                           00000123469999999999999999999999999999999999999


Q ss_pred             CCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhh--cCCCCCCChHHHH
Q 002719          734 ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE--MSRKSRPELGKDV  791 (888)
Q Consensus       734 Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~--~dP~~RPs~~~~v  791 (888)
                      ||..................+. ....  ...+..+.+|+.+++.  .++..||++ +++
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~-~p~~--~~~s~~~~~li~~l~~~~~~r~~r~~~-~ei  290 (363)
T cd05628         235 PFCSETPQETYKKVMNWKETLI-FPPE--VPISEKAKDLILRFCCEWEHRIGAPGV-EEI  290 (363)
T ss_pred             CCCCCCHHHHHHHHHcCcCccc-CCCc--CCCCHHHHHHHHHHcCChhhcCCCCCH-HHH
Confidence            9976554332222111111000 0111  1234678888888654  233346787 444

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=3.4e-35  Score=320.71  Aligned_cols=254  Identities=27%  Similarity=0.399  Sum_probs=199.4

Q ss_pred             CCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      +|.+...||+|+||.||+|....       ..|++|.+...... ....+.+|+.+++.++||||+++++.|  .+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            46778899999999999998642       46899988754322 235688999999999999999999987  356889


Q ss_pred             EEEecCCCChhhhhhccC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCc
Q 002719          599 VYEYLPNGSLEDRLSCKD---------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN  657 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~N  657 (888)
                      ||||+.+|+|.+++....                     ...++++..++.++.|++.||.|||+   ++|+||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            999999999999885321                     12358899999999999999999999   899999999999


Q ss_pred             EEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 002719          658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG  736 (888)
Q Consensus       658 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~  736 (888)
                      ||+++++.+||+|||+++..........      .....++..|+|||.+.+..++.++||||||+++|+|+| |.+||.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  231 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVK------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  231 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhc------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999876543221110      112235778999999988889999999999999999998 999997


Q ss_pred             CchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          737 ITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       737 ~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .............      ......+...+..+.+++.+||+.+|.+||++ .++.+.|+.+
T Consensus       232 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~-~~i~~~l~~~  286 (290)
T cd05045         232 GIAPERLFNLLKT------GYRMERPENCSEEMYNLMLTCWKQEPDKRPTF-ADISKELEKM  286 (290)
T ss_pred             CCCHHHHHHHHhC------CCCCCCCCCCCHHHHHHHHHHccCCcccCCCH-HHHHHHHHHH
Confidence            5543321111110      01111233445789999999999999999999 7788888765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7e-36  Score=332.97  Aligned_cols=241  Identities=25%  Similarity=0.329  Sum_probs=189.2

Q ss_pred             CCCccceeeecCceEEEEEEE-----CCeEEEEEEecCCC----CCChhHHHHHHHHHHhc-CCCCeeeeecccC--Cce
Q 002719          529 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW  596 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~-----~~~~VAIK~l~~~~----~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~  596 (888)
                      +|.+.+.||+|+||.||++..     .+..||+|++....    ......+..|+.+|..+ +||||+++++++.  +..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478889999999999999875     35789999986532    12235678899999999 5999999998873  468


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||+++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            899999999999999853   3458999999999999999999999   8999999999999999999999999999876


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccc
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNL  753 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~  753 (888)
                      +.......       .....||+.|+|||++.+. .++.++|||||||+||+|+||..||......  ...+... +.. 
T Consensus       155 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~-~~~-  225 (332)
T cd05614         155 FLSEEKER-------TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR-ILK-  225 (332)
T ss_pred             ccccCCCc-------cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH-Hhc-
Confidence            53322111       1234589999999999865 4788999999999999999999999643211  1111110 011 


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                         ....++...+..+.+|+.+||+.||.+||+.
T Consensus       226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  256 (332)
T cd05614         226 ---CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGA  256 (332)
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence               1112334456789999999999999999953

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2e-35  Score=320.97  Aligned_cols=252  Identities=24%  Similarity=0.381  Sum_probs=197.6

Q ss_pred             CCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      +|.+.+.||+|+||.||+|.+.       +..||||++....... ...+.+|+.++..++||||+++++++.  +..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4677788999999999999864       3679999987543221 356889999999999999999999884  46889


Q ss_pred             EEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          599 VYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      ++||+++++|.+++....             ....+++..++.++.|++.||.|||+   +||+||||||.|||++.++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence            999999999999984221             12358888999999999999999999   89999999999999999999


Q ss_pred             eeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA  744 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~  744 (888)
                      +||+|||+++.........      ......+++.|+|||.+.++.++.++|||||||++|||++ |.+||.........
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~  236 (283)
T cd05091         163 VKISDLGLFREVYAADYYK------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI  236 (283)
T ss_pred             eEecccccccccccchhee------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            9999999988654322111      1122346789999999988899999999999999999998 88898654432221


Q ss_pred             HhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          745 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       745 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ...      ........+...+..+.+|+..||+.+|.+||++ ++|+..|+
T Consensus       237 ~~i------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-~~i~~~l~  281 (283)
T cd05091         237 EMI------RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-KDIHSRLR  281 (283)
T ss_pred             HHH------HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHhh
Confidence            111      1111112334456789999999999999999999 77766665

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-35  Score=321.64  Aligned_cols=243  Identities=23%  Similarity=0.312  Sum_probs=193.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      +|+..+.||+|+||.||++...  ++.||+|++......   ....+.+|+.+++.++||||+++++++.  +..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4778899999999999999875  678999998754322   2345778999999999999999999873  57899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++... ....+++..+..++.|++.||.|||+   ++|+||||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            99999999888533 23468999999999999999999999   899999999999999999999999999987653221


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      .         .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...........   +...+......+
T Consensus       157 ~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~  224 (285)
T cd05605         157 T---------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE---VERRVKEDQEEY  224 (285)
T ss_pred             c---------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH---HHHHhhhccccc
Confidence            1         1223589999999999988999999999999999999999999976443211100   000111112223


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +...+..+.+|+.+||..||.+||+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05605         225 SEKFSEAARSICRQLLTKDPGFRLGC  250 (285)
T ss_pred             CcccCHHHHHHHHHHccCCHHHhcCC
Confidence            44456789999999999999999943

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=8.7e-36  Score=331.11  Aligned_cols=240  Identities=23%  Similarity=0.295  Sum_probs=187.6

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHH-HHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~-iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||+||+|...  +..||||++.....   .....+..|.. +++.++||||+++++++  .+..++||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            6999999999999885  68899999875321   12234555555 56789999999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++........    
T Consensus        82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~----  151 (323)
T cd05575          82 ELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK----  151 (323)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC----
Confidence            99998843   3468899999999999999999999   8999999999999999999999999999875322111    


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.............  ...     ...+...+
T Consensus       152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~-----~~~~~~~~  220 (323)
T cd05575         152 ----TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL--NKP-----LRLKPNIS  220 (323)
T ss_pred             ----ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCC-----CCCCCCCC
Confidence                1123458999999999999999999999999999999999999997654332211110  000     11222345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+.+|+.+||+.||.+||+....+.+++
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~il  249 (323)
T cd05575         221 VSARHLLEGLLQKDRTKRLGAKDDFLEIK  249 (323)
T ss_pred             HHHHHHHHHHhhcCHHhCCCCCCCHHHHH
Confidence            78999999999999999999853443433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-36  Score=318.30  Aligned_cols=253  Identities=24%  Similarity=0.336  Sum_probs=199.1

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecC--CCCCChhHHHHHHHHHHhcCCCCeeeeecccC-------
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-------  593 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~--~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-------  593 (888)
                      .....|...+.||+|+||.|..+.++  +..||||.+..  ......++..+|+.+|+.++|+||+.+++.+.       
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            34456777889999999999999876  68899999873  33344567889999999999999999999872       


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...|+|+|+| +.+|...+.   .+..|+...+..+++|+++||+|+|+   .+|+||||||.|+|++.+..+||+|||+
T Consensus        99 ~DvYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGL  171 (359)
T KOG0660|consen   99 NDVYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGL  171 (359)
T ss_pred             ceeEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccc
Confidence            2579999999 568999884   44559999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---  749 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~---  749 (888)
                      |+......      .....|..+.|.+|.|||++.. ..|+.+.||||.||||.||++|++.|.+.+.+........   
T Consensus       172 AR~~~~~~------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG  245 (359)
T KOG0660|consen  172 ARYLDKFF------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG  245 (359)
T ss_pred             eeeccccC------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence            99876541      1122356678999999998865 5799999999999999999999999987655432221100   


Q ss_pred             --------------cccccCC--------CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          750 --------------LKNLLDP--------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       750 --------------~~~~ld~--------~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                    ....+..        ....+| ...+...+|+.+||..||.+|+|..+.+
T Consensus       246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL  308 (359)
T KOG0660|consen  246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEAL  308 (359)
T ss_pred             CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHh
Confidence                          0001100        011122 3345789999999999999999995444

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.6e-35  Score=320.13  Aligned_cols=253  Identities=24%  Similarity=0.418  Sum_probs=198.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      .+|....+||+|+||.||++...       +..+|+|.+..........+.+|+++++.++||||+++++++.  +..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            36777889999999999999642       3579999887655444567999999999999999999999884  56889


Q ss_pred             EEEecCCCChhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          599 VYEYLPNGSLEDRLSCKDN------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      ||||+++|+|.+++.....            ...+++..++.++.|++.||.|||+   +|++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            9999999999999854321            1358899999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL  745 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~  745 (888)
                      ||+|||++..........      ......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..........
T Consensus       162 kL~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  235 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYR------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE  235 (280)
T ss_pred             EECCCCceeEcCCCceee------cCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence            999999987554321110      0122335788999999999999999999999999999998 999996543322211


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      .....      .....+...+..+.+|+.+||..||.+||++ ++|...|+
T Consensus       236 ~~~~~------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-~~l~~~l~  279 (280)
T cd05092         236 CITQG------RELERPRTCPPEVYAIMQGCWQREPQQRMVI-KDIHSRLQ  279 (280)
T ss_pred             HHHcC------ccCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHh
Confidence            11111      1111223345779999999999999999999 77776664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=4e-35  Score=315.38  Aligned_cols=256  Identities=27%  Similarity=0.410  Sum_probs=202.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      .+|.+.+.||.|+||.||+|...  +..|+||.+.......   ...+.+|+.+++.++||||+++++++  .+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            36788889999999999999864  6889999876543222   34688999999999999999999987  45788999


Q ss_pred             EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ||+++++|.+++... .....+++..++.++.+++.||.|||+   +|++|+||||+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            999999999988542 234568999999999999999999999   8999999999999999999999999999876543


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....        .....|+..|+|||++.+..++.++||||||+++|+|++|..||............. +.....+  .
T Consensus       159 ~~~~--------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~--~  227 (267)
T cd08229         159 KTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK-IEQCDYP--P  227 (267)
T ss_pred             CCcc--------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh-hhcCCCC--C
Confidence            2211        112348899999999998899999999999999999999999996443211111110 1111001  0


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..+...+..+.+++.+||..+|.+||++ +.|++++.++
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~i~~~~~~~  265 (267)
T cd08229         228 LPSDHYSEELRQLVNMCINPDPEKRPDI-TYVYDVAKRM  265 (267)
T ss_pred             CCcccccHHHHHHHHHhcCCCcccCCCH-HHHHHHHhhh
Confidence            1122355789999999999999999999 7888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.7e-35  Score=314.94  Aligned_cols=252  Identities=31%  Similarity=0.484  Sum_probs=201.4

Q ss_pred             cCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEEEEecC
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLVYEYLP  604 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV~Ey~~  604 (888)
                      .++|.+.++||+|+||.||+|.+.+ ..||+|.+.... .....+.+|+.+++.++||||+++++.+ .+..++||||++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            3568999999999999999998764 579999987533 2456789999999999999999999977 456789999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|.+++... ....+++..+..++.|++.||.|||+   ++++||||||.||+++.++.+||+|||++..+.......
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            99999999543 23457899999999999999999999   899999999999999999999999999997664332111


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             .....++..|+|||++.+..++.++|||||||++|+|+| |.+||..............  ..    ....+.
T Consensus       160 -------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~--~~----~~~~~~  226 (262)
T cd05071         160 -------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER--GY----RMPCPP  226 (262)
T ss_pred             -------ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc--CC----CCCCcc
Confidence                   112346778999999988899999999999999999999 8889975543221111100  00    011123


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+..+.+|+.+||+.+|.+||++ ..+...|+.
T Consensus       227 ~~~~~l~~li~~~l~~~p~~Rp~~-~~~~~~l~~  259 (262)
T cd05071         227 ECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED  259 (262)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCH-HHHHHHHHH
Confidence            445789999999999999999999 777777764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-35  Score=313.30  Aligned_cols=247  Identities=25%  Similarity=0.467  Sum_probs=196.7

Q ss_pred             CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN  605 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~g  605 (888)
                      +|.+.+.||+|+||.||+|.+.+ ..+|+|++.... .....+.+|+.+++.++||||+++++++.  +..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            57788899999999999998764 579999986443 23457889999999999999999999874  468899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|.+++....  ..+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||+++......... 
T Consensus        84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~-  157 (256)
T cd05059          84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS-  157 (256)
T ss_pred             CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccc-
Confidence            99999985332  368999999999999999999999   899999999999999999999999999987654321111 


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            .....++..|+|||.+.+..++.++||||||+++|+|++ |.+||..............   .   .....+..
T Consensus       158 ------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~---~~~~~~~~  225 (256)
T cd05059         158 ------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA---G---YRLYRPKL  225 (256)
T ss_pred             ------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc---C---CcCCCCCC
Confidence                  111224568999999998999999999999999999999 8999975543332211111   1   11122334


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .+..+.+|+.+||..+|.+||++ .++++.|
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rpt~-~~~l~~l  255 (256)
T cd05059         226 APTEVYTIMYSCWHEKPEDRPAF-KKLLSQL  255 (256)
T ss_pred             CCHHHHHHHHHHhcCChhhCcCH-HHHHHHh
Confidence            56789999999999999999999 6666554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3e-35  Score=313.26  Aligned_cols=247  Identities=28%  Similarity=0.382  Sum_probs=198.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCC-eeeeecccC--C------c
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPN-LVTLVGACP--E------V  595 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~Hpn-Iv~l~g~~~--~------~  595 (888)
                      .|....+||+|.||+||+|...  +..||+|.+.....  ..+....+|+.+|+.|+|+| |+.|++++.  +      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            4667778999999999999875  67899999987644  24567899999999999999 999999882  2      6


Q ss_pred             eEEEEEecCCCChhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~-~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      +++||||+. -+|..++...... ..++...+..++.||+.||.|||+   ++|+||||||.||||+++|.+||+|||+|
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence            789999995 5899998644321 357778999999999999999999   99999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      +.+.-+..        ..+..++|.+|.|||++.+. .|+...||||+|||++||+++++.|.+..+.+.......+...
T Consensus       168 ra~~ip~~--------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt  239 (323)
T KOG0594|consen  168 RAFSIPMR--------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT  239 (323)
T ss_pred             HHhcCCcc--------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence            96543221        13455689999999999887 7999999999999999999999999988876655543322221


Q ss_pred             cCCCCCCCCh------------------hh-------HHHHHHHHHHHhhcCCCCCCChHH
Q 002719          754 LDPLAGDWPF------------------VQ-------AEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       754 ld~~~~~~p~------------------~~-------~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .  ....||.                  ..       .....+++.+||+++|.+|.+...
T Consensus       240 P--~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~  298 (323)
T KOG0594|consen  240 P--NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKG  298 (323)
T ss_pred             C--CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence            1  1111211                  01       136889999999999999999843

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.9e-35  Score=322.78  Aligned_cols=258  Identities=25%  Similarity=0.402  Sum_probs=202.7

Q ss_pred             hhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeecccC--
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--  593 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--  593 (888)
                      ...++|...+.||+|+||.||+|...+       ..||+|.+..... .....+.+|+.++.++ +||||++++++|.  
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            344578889999999999999998642       5699999875422 2234688999999999 8999999999883  


Q ss_pred             CceEEEEEecCCCChhhhhhcc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL  660 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~-------------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl  660 (888)
                      ...++||||+++|+|.+++...             .....+++..++.++.|++.||.|||+   ++|+||||||+|||+
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~  165 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLV  165 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEE
Confidence            4689999999999999998542             223568999999999999999999999   899999999999999


Q ss_pred             cCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCch
Q 002719          661 DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITK  739 (888)
Q Consensus       661 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~  739 (888)
                      +.++.+||+|||+++.+........      .....++..|+|||.+.+..++.++|||||||++|+|++ |..||....
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  239 (293)
T cd05053         166 TEDHVMKIADFGLARDIHHIDYYRK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP  239 (293)
T ss_pred             cCCCeEEeCccccccccccccceec------cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence            9999999999999986654321111      112235678999999988899999999999999999997 999997554


Q ss_pred             HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          740 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       740 ~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .........      .......+...+..+.+|+.+||..+|.+||++ .++++.|+.+
T Consensus       240 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~eil~~l~~~  291 (293)
T cd05053         240 VEELFKLLK------EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTF-KQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHH------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHHHHh
Confidence            322111110      011112334456789999999999999999999 7777777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.5e-35  Score=320.39  Aligned_cols=256  Identities=28%  Similarity=0.439  Sum_probs=196.9

Q ss_pred             CCccceeeecCceEEEEEEE------CCeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC----CceEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL  598 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~------~~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~L  598 (888)
                      |...+.||+|+||+||++.+      .+..||+|.+..... .....+.+|+.+|+.++||||++++++|.    ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37788999999999988754      246799999876432 23457889999999999999999999873    24789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++|+|.+++..    ..+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++....
T Consensus        86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccC
Confidence            9999999999999842    348999999999999999999999   899999999999999999999999999998664


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhh-------ccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDT-------GKL  750 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~-------~~~  750 (888)
                      .......     ......++..|+|||++.+..++.++|||||||++|+|+||..||...... ......       ..+
T Consensus       159 ~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd05080         159 EGHEYYR-----VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL  233 (283)
T ss_pred             Ccchhhc-----cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence            3221100     011223567899999998889999999999999999999999998543211 111100       000


Q ss_pred             ccccC-CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          751 KNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       751 ~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ....+ ......+...+..+.+++.+||+.+|.+||++ +.++..|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~i~~~l~~~  281 (283)
T cd05080         234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF-RSLIPILKEM  281 (283)
T ss_pred             hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCH-HHHHHHHHHh
Confidence            00000 01111233456789999999999999999999 7888888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.1e-35  Score=338.05  Aligned_cols=248  Identities=22%  Similarity=0.299  Sum_probs=190.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      +|...++||+|+||.||+|...  +..||+|++.....   .....+.+|+.+|+.++||||++++++|  .+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5888999999999999999875  57899999875422   1234688999999999999999999998  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++..   ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..+....
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~  155 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  155 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence            9999999999853   2458899999999999999999999   899999999999999999999999999986432110


Q ss_pred             ccCC---------------------------------------CccccccCCCCCCcccCChhhhccCCCCchhhHHHHH
Q 002719          682 ISSN---------------------------------------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG  722 (888)
Q Consensus       682 ~~~~---------------------------------------~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlG  722 (888)
                      ....                                       ...........||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (382)
T cd05625         156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  235 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence            0000                                       0000011234699999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          723 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       723 viL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      |+||||++|++||..................+   ........+..+.+++.+|+ .+|.+|++
T Consensus       236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~p~~~~~s~~~~~li~~l~-~~p~~R~~  295 (382)
T cd05625         236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSL---HIPPQAKLSPEASDLIIKLC-RGPEDRLG  295 (382)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc---CCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence            99999999999998765443332221111111   00111233567888888876 59999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-35  Score=317.96  Aligned_cols=254  Identities=24%  Similarity=0.393  Sum_probs=200.4

Q ss_pred             cCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCce
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVW  596 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~  596 (888)
                      .++|.+...||+|+||.||+|...+       ..||+|.+..... .....+.+|+.+|+.++||||+++++++  ....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            3478889999999999999998753       5699999865432 2234688999999999999999999987  4578


Q ss_pred             EEEEEecCCCChhhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeee
Q 002719          597 TLVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS  669 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~  669 (888)
                      ++||||+++|+|.+++.....       ...+++..++.++.|++.||.|||+   ++++||||||+|||++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence            999999999999999864321       2347889999999999999999999   899999999999999999999999


Q ss_pred             ccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhc
Q 002719          670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTG  748 (888)
Q Consensus       670 DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~  748 (888)
                      |||+++.+........      .....++..|+|||.+.++.++.++|||||||++|+|+| |.+||.............
T Consensus       162 dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  235 (277)
T cd05032         162 DFGMTRDIYETDYYRK------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI  235 (277)
T ss_pred             CcccchhhccCccccc------CCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence            9999886544321111      122346789999999988889999999999999999998 999996544332211111


Q ss_pred             ccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       749 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                            .......|...+..+.+++.+||+.+|.+||++ .+++..|+
T Consensus       236 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~  276 (277)
T cd05032         236 ------DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF-LEIVSSLK  276 (277)
T ss_pred             ------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHhc
Confidence                  111112233346789999999999999999999 77766664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-36  Score=333.88  Aligned_cols=234  Identities=28%  Similarity=0.337  Sum_probs=189.7

Q ss_pred             ceeeecCceEEEEEEE-----CCeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          534 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~-----~~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      +.||+|+||.||++..     .+..||+|++.....  .....+.+|+.+|++++||||+++++++  .+..|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4699999999999865     357899999975432  2234577899999999999999999988  457899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|.+++..   ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++......... 
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-  154 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-  154 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc-
Confidence            9999999843   3468999999999999999999999   89999999999999999999999999998764332111 


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                             .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..............       .....|..
T Consensus       155 -------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~-------~~~~~p~~  220 (318)
T cd05582         155 -------AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK-------AKLGMPQF  220 (318)
T ss_pred             -------eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc-------CCCCCCCC
Confidence                   1234589999999999988899999999999999999999999976554332211110       01123444


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .+..+.+|+.+||+.||.+||++.
T Consensus       221 ~~~~~~~li~~~l~~~P~~R~~a~  244 (318)
T cd05582         221 LSPEAQSLLRALFKRNPANRLGAG  244 (318)
T ss_pred             CCHHHHHHHHHHhhcCHhHcCCCC
Confidence            567899999999999999999963

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.2e-35  Score=313.07  Aligned_cols=247  Identities=26%  Similarity=0.444  Sum_probs=196.4

Q ss_pred             ceeeecCceEEEEEEECC-----eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCCC
Q 002719          534 LKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG  606 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~gg  606 (888)
                      ++||+|+||.||+|.+..     ..||+|.+...... ....+.+|+.+++.++||||+++++++. +..++||||+++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            369999999999997642     57999998765442 3457889999999999999999999884 4678999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++...   ..+++..++.++.|++.||.|||.   ++++||||||+|||++.++.+||+|||+++.........  
T Consensus        81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~--  152 (257)
T cd05060          81 PLLKYLKKR---REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY--  152 (257)
T ss_pred             cHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccc--
Confidence            999999533   368999999999999999999999   899999999999999999999999999998664332111  


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                         .......++..|+|||.+.+..++.++|||||||++|+|++ |.+||................      ....+...
T Consensus       153 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~  223 (257)
T cd05060         153 ---RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE------RLPRPEEC  223 (257)
T ss_pred             ---ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC------cCCCCCCC
Confidence               11112234578999999998899999999999999999998 999997554332211111111      11223345


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      +..+.+++.+||..+|.+||++ .++.+.|+.+
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp~~-~~l~~~l~~~  255 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRPTF-SELESTFRRD  255 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCcCH-HHHHHHHHhc
Confidence            5789999999999999999999 7888887754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.1e-35  Score=327.64  Aligned_cols=241  Identities=24%  Similarity=0.317  Sum_probs=188.4

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHH-HHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~-iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|...  +..||+|++.....   .....+..|.. +++.++||||+++++++  .+..++||||+++|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            6999999999999885  57899999875321   12234555554 67889999999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|...+..   ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++........    
T Consensus        82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----  151 (321)
T cd05603          82 ELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE----  151 (321)
T ss_pred             CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC----
Confidence            99988842   3458889999999999999999999   8999999999999999999999999999875322111    


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|.+||...+........  ...     ....|...+
T Consensus       152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~-----~~~~~~~~~  220 (321)
T cd05603         152 ----TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI--LHK-----PLQLPGGKT  220 (321)
T ss_pred             ----ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH--hcC-----CCCCCCCCC
Confidence                012345899999999999889999999999999999999999999765433221111  111     112333455


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ..+.+++.+||+.+|.+||+....+.++++
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~  250 (321)
T cd05603         221 VAACDLLVGLLHKDQRRRLGAKADFLEIKN  250 (321)
T ss_pred             HHHHHHHHHHccCCHhhcCCCCCCHHHHhC
Confidence            789999999999999999987544544443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.4e-35  Score=311.49  Aligned_cols=248  Identities=28%  Similarity=0.464  Sum_probs=203.0

Q ss_pred             cCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .++|.+...||.|+||.||+|...++.||+|.+..... ....+.+|+.+++.++|+||+++++++  .+..++||||++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            34788889999999999999999999999999976543 456799999999999999999999987  457899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++..... ..+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++........  
T Consensus        84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~--  157 (256)
T cd05039          84 KGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD--  157 (256)
T ss_pred             CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence            9999999854332 368999999999999999999999   8999999999999999999999999999986632211  


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                               ...++..|+|||++.++.++.++||||||+++|+|++ |..||...............      .....+.
T Consensus       158 ---------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~  222 (256)
T cd05039         158 ---------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG------YRMEAPE  222 (256)
T ss_pred             ---------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC------CCCCCcc
Confidence                     1224678999999988899999999999999999997 99999765433221111110      0111233


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+..+.+++.+||..+|.+||++ .+++..|+.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~~  255 (256)
T cd05039         223 GCPPEVYKVMKDCWELDPAKRPTF-KQLREQLAL  255 (256)
T ss_pred             CCCHHHHHHHHHHhccChhhCcCH-HHHHHHHhc
Confidence            345789999999999999999999 777777754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.7e-35  Score=329.00  Aligned_cols=239  Identities=21%  Similarity=0.305  Sum_probs=191.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~LV~  600 (888)
                      +|+..+.||+|+||.||++...  +..||+|++....   ......+..|..++..+. |++|+++++++  .+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4778889999999999999875  5789999987542   222345778999998886 57777888877  35789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++.....
T Consensus        81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            99999999998843   3458999999999999999999999   89999999999999999999999999998754322


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...        .....||+.|+|||++.+..++.++|||||||++|+|++|++||..............       ....
T Consensus       155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~-------~~~~  219 (323)
T cd05615         155 GVT--------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME-------HNVS  219 (323)
T ss_pred             Ccc--------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCCC
Confidence            111        1233589999999999998999999999999999999999999976554322111110       1112


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      +|...+..+.+|+.+||+.+|.+|++..
T Consensus       220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         220 YPKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             CCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            3444567899999999999999999863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.5e-35  Score=327.02  Aligned_cols=198  Identities=26%  Similarity=0.409  Sum_probs=169.2

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .++|++.++||.|+||.||++.+.  +..+|+|.+..... .....+.+|+++|+.++||||++++++|  .+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            367999999999999999999886  57799998875422 1235688999999999999999999998  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++..   ...+++..+..++.+++.||.|||+.  ++|+||||||+|||++.++.+||+|||++..+....
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~  158 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence            9999999999853   34588999999999999999999972  369999999999999999999999999987553221


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK  739 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~  739 (888)
                                .....|+..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       159 ----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~  206 (333)
T cd06650         159 ----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPD  206 (333)
T ss_pred             ----------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcc
Confidence                      122358999999999998899999999999999999999999997543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.1e-35  Score=337.21  Aligned_cols=250  Identities=23%  Similarity=0.300  Sum_probs=192.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||++...  ++.||||++....   ......+.+|+.+|+.++||||+++++.+  .+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36889999999999999999876  5789999986532   12245688999999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+|..+...
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~  154 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence            99999999999953   3458889999999999999999999   89999999999999999999999999998543210


Q ss_pred             cccC-----------------------------------CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHH
Q 002719          681 EISS-----------------------------------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL  725 (888)
Q Consensus       681 ~~~~-----------------------------------~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL  725 (888)
                      ....                                   .....+......||+.|+|||++.+..++.++|||||||+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  234 (376)
T cd05598         155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  234 (376)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence            0000                                   00000111234699999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCC---Ch
Q 002719          726 LRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP---EL  787 (888)
Q Consensus       726 ~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RP---s~  787 (888)
                      |+|++|++||..................+.   .......+..+.+++.+|+ .+|.+|+   ++
T Consensus       235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~  295 (376)
T cd05598         235 YEMLVGQPPFLADTPAETQLKVINWETTLH---IPSQAKLSREASDLILRLC-CGAEDRLGKNGA  295 (376)
T ss_pred             eehhhCCCCCCCCCHHHHHHHHhccCcccc---CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCH
Confidence            999999999986654433222211111111   0111234567888999877 5999999   66

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.4e-35  Score=341.33  Aligned_cols=247  Identities=23%  Similarity=0.362  Sum_probs=188.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC----------C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----------E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----------~  594 (888)
                      ..+|.+.+.||+|+||.||+|...  +..||||.+...    .....+|+.+|+.++||||+++++++.          .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            457999999999999999999875  578999988543    234568999999999999999988651          1


Q ss_pred             ceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-ceeeeccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFG  672 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-~vKL~DFG  672 (888)
                      ..++||||+++ +|.+++... .....+++..++.++.||+.||.|||+   ++|+||||||+||||+.++ .+||+|||
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFG  216 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFG  216 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence            35689999975 676666432 344578999999999999999999999   8999999999999998654 79999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-  750 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~-  750 (888)
                      +|+.+.....         .....||+.|+|||++.+. .++.++|||||||+||+|++|.+||............... 
T Consensus       217 la~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~  287 (440)
T PTZ00036        217 SAKNLLAGQR---------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVL  287 (440)
T ss_pred             cchhccCCCC---------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            9986543221         1123589999999998764 6899999999999999999999999765433222111000 


Q ss_pred             ---------------ccc-cCC-----CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          751 ---------------KNL-LDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       751 ---------------~~~-ld~-----~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                                     ..+ ++.     +...+|...+..+.+|+.+||.+||.+||++.+.
T Consensus       288 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~  348 (440)
T PTZ00036        288 GTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA  348 (440)
T ss_pred             CCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence                           000 000     0011233345789999999999999999999443

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=7.5e-36  Score=332.70  Aligned_cols=234  Identities=22%  Similarity=0.300  Sum_probs=185.8

Q ss_pred             ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      +.||+|+||.||++...  +..||+|++.....   .....+..|+.++.++ +||||+++++++  .+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            36999999999999876  57899999976432   2234577899988877 799999999987  4578999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|..++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++........  
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~--  152 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--  152 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc--
Confidence            999988843   3468999999999999999999999   89999999999999999999999999998753221111  


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHhhcccccccCCC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--------VQYALDTGKLKNLLDPL  757 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--------~~~~~~~~~~~~~ld~~  757 (888)
                            .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....        .......      +...
T Consensus       153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~------i~~~  220 (329)
T cd05618         153 ------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV------ILEK  220 (329)
T ss_pred             ------cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH------HhcC
Confidence                  1234589999999999999999999999999999999999999952110        0111100      0011


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ....|...+..+.+|+.+||+.||.+||+.
T Consensus       221 ~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         221 QIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            112344556789999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-36  Score=334.49  Aligned_cols=242  Identities=29%  Similarity=0.446  Sum_probs=200.4

Q ss_pred             eeeecCceEEEEEEECCe--EEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEEEecCCCChhh
Q 002719          535 KIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED  610 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~~--~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~Ey~~ggsL~~  610 (888)
                      .||+|.||+||.|.+..+  .+|||-+.........-+..|+.+.++|+|.|||+++|+|.+  .+-|.||-++||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            699999999999988764  579998887666666779999999999999999999999954  4568999999999999


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc-CCCceeeeccccccccccccccCCCccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTL  689 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~  689 (888)
                      +|..+-+.-.-++.++-.+..||++||.|||.   +.|||||||-+|+|++ -.|.+||+|||.++.+..-.        
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--------  730 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--------  730 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCC--------
Confidence            99654332223788999999999999999999   8899999999999996 67999999999998765322        


Q ss_pred             cccCCCCCCcccCChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 002719          690 CCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       690 ~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                      .+...+.||..|||||++..+  .|+.++|||||||++.||.||+|||......+.++-...+...    .+..|...+.
T Consensus       731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKv----HP~iPeelsa  806 (1226)
T KOG4279|consen  731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKV----HPPIPEELSA  806 (1226)
T ss_pred             ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceec----CCCCcHHHHH
Confidence            123445699999999999876  5899999999999999999999999765555544433333332    3456778889


Q ss_pred             HHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          768 QLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      +..++|.+|+.++|.+||++ ++++
T Consensus       807 eak~FilrcFepd~~~R~sA-~~LL  830 (1226)
T KOG4279|consen  807 EAKNFILRCFEPDPCDRPSA-KDLL  830 (1226)
T ss_pred             HHHHHHHHHcCCCcccCccH-HHhc
Confidence            99999999999999999998 5543

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6.2e-35  Score=313.04  Aligned_cols=252  Identities=30%  Similarity=0.492  Sum_probs=202.6

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEEEEecC
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLVYEYLP  604 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV~Ey~~  604 (888)
                      .++|.+.++||+|+||.||+|... ++.||+|.+.... .....+.+|+.+++.++||||+++++++ .+..++||||++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME   83 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence            346888999999999999999875 5789999987544 3456799999999999999999999987 456899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.... ...+++..++.++.|++.||.|||+   .|++||||||+||+++.++.++|+|||++..........
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05067          84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence            999999885433 3568999999999999999999999   899999999999999999999999999987654322111


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             .....++..|+|||++.+..++.++||||||+++|+|++ |++||................      ....+.
T Consensus       160 -------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~  226 (260)
T cd05067         160 -------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY------RMPRPD  226 (260)
T ss_pred             -------ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC------CCCCCC
Confidence                   122346788999999998899999999999999999999 999997554332211111110      011223


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+..+.+++.+||..+|.+||++ +.+...|+.
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~~  259 (260)
T cd05067         227 NCPEELYELMRLCWKEKPEERPTF-EYLRSVLED  259 (260)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCH-HHHHHHhhc
Confidence            345789999999999999999999 778777764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.2e-35  Score=327.26  Aligned_cols=232  Identities=22%  Similarity=0.294  Sum_probs=188.0

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|.+.  +..||||++....   ......+..|..++..+ +||||+++++++  .+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            6999999999999886  4689999987542   22345677899999888 699999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++........   
T Consensus        82 ~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---  152 (318)
T cd05570          82 DLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---  152 (318)
T ss_pred             CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc---
Confidence            99988843   3468999999999999999999999   89999999999999999999999999998643221111   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..............       ....+|...+
T Consensus       153 -----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~-------~~~~~~~~~~  220 (318)
T cd05570         153 -----TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE-------DEVRYPRWLS  220 (318)
T ss_pred             -----ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-------CCCCCCCcCC
Confidence                 1223589999999999999999999999999999999999999976554332211110       0112334456


Q ss_pred             HHHHHHHHHHhhcCCCCCCCh
Q 002719          767 EQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..+.+|+.+||..||.+||++
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCC
Confidence            789999999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=5.5e-35  Score=317.01  Aligned_cols=253  Identities=23%  Similarity=0.405  Sum_probs=199.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--Ce----EEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~----~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV  599 (888)
                      .+|...++||+|+||+||+|.+.  +.    .||+|++...... ....+.+|+.++..+.||||++++++|. ...+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            46888899999999999999864  32    5899998754322 2456889999999999999999999884 467899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|.+++...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        87 ~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          87 TQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             EEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            9999999999998532  3468999999999999999999999   8999999999999999999999999999987643


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDP  756 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~--~~~~~~~~~~ld~  756 (888)
                      ......      .....+++.|+|||.+.+..++.++|||||||++|||++ |.+||........  .+..+.       
T Consensus       162 ~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------  228 (279)
T cd05109         162 DETEYH------ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-------  228 (279)
T ss_pred             ccceee------cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------
Confidence            221100      112235778999999998899999999999999999998 9999975433221  111111       


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                       ....+...+..+.+++.+||..||.+||++ .++++.|+.+..
T Consensus       229 -~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-~~l~~~l~~~~~  270 (279)
T cd05109         229 -RLPQPPICTIDVYMIMVKCWMIDSECRPRF-RELVDEFSRMAR  270 (279)
T ss_pred             -cCCCCccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHhhc
Confidence             011123345789999999999999999999 667677766543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=6.8e-35  Score=352.04  Aligned_cols=266  Identities=23%  Similarity=0.323  Sum_probs=204.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|.+.++||+|+||.||+|.+.  ++.||||++.......   ...+.+|+.+++.++||||+++++++.  +..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            47899999999999999999875  5789999997543222   346889999999999999999999884  4789999


Q ss_pred             EecCCCChhhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccc
Q 002719          601 EYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFG  672 (888)
                      ||++||+|.+++....        ....+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            9999999999885321        12345677889999999999999999   899999999999999999999999999


Q ss_pred             cccccccccccCC----------CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 002719          673 ISRFLSQNEISSN----------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ  742 (888)
Q Consensus       673 la~~~~~~~~~~~----------~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~  742 (888)
                      ++...........          ...........||+.|+|||++.+..++.++|||||||++|+|+||++||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9987622110000          000011123469999999999999999999999999999999999999997543322


Q ss_pred             HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          743 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       743 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      .... .   ....+.........+..+.+++.+||..||++||+..+++.+.|+....
T Consensus       239 i~~~-~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        239 ISYR-D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hhhh-h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            1111 1   1111111000123456799999999999999999888888888877643

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=330.63  Aligned_cols=246  Identities=26%  Similarity=0.396  Sum_probs=206.2

Q ss_pred             CCccceeeecCceEEEEEEECC-----eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEe
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEY  602 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey  602 (888)
                      ....++||+|.||.|++|.|+.     -.||||.+...... ....|.+|+.+|.+|+|||+++|||+.- ....+|||+
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~EL  191 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFEL  191 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhh
Confidence            4456789999999999999973     45999999887655 4678999999999999999999999985 567799999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      ++.|+|.+.|++ .....|.......++.|||.|+.||..   +++|||||...|+||-....|||+||||.+-+.....
T Consensus       192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            999999999976 556778889999999999999999999   8999999999999999999999999999998775542


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..     .......-.+.|+|||.+....++.++|||+|||+||||+| |..||.+....+......      +...-..
T Consensus       268 ~Y-----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD------~~erLpR  336 (1039)
T KOG0199|consen  268 MY-----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID------AGERLPR  336 (1039)
T ss_pred             ce-----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc------ccccCCC
Confidence            21     11223345789999999999999999999999999999998 889998766554432221      1122234


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      |..+++.+++++..||..+|.+||+|..+
T Consensus       337 Pk~csedIY~imk~cWah~paDRptFsai  365 (1039)
T KOG0199|consen  337 PKYCSEDIYQIMKNCWAHNPADRPTFSAI  365 (1039)
T ss_pred             CCCChHHHHHHHHHhccCCccccccHHHH
Confidence            67788999999999999999999999544

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=6e-35  Score=316.69  Aligned_cols=258  Identities=22%  Similarity=0.340  Sum_probs=204.2

Q ss_pred             hcCCCCccceeeecCceEEEEEEECC------eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc---CCc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC---PEV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~---~~~  595 (888)
                      ..++|.+...||+|+||.||+|.+..      ..|++|.+..... .....+.+|+.+++.++||||+++++++   ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34578889999999999999998754      6799998864422 2245688999999999999999999986   246


Q ss_pred             eEEEEEecCCCChhhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeec
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNS-----PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD  670 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~-----~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~D  670 (888)
                      .+++++|+++|+|.+++......     ..+++..++.++.+++.||.|||+   ++++||||||+|||++.++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence            88999999999999998643222     568999999999999999999999   8999999999999999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcc
Q 002719          671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGK  749 (888)
Q Consensus       671 FGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~  749 (888)
                      ||+++.+........      .....++..|+|||++.+..++.++|||||||++|++++ |++||..............
T Consensus       161 ~g~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  234 (280)
T cd05043         161 NALSRDLFPMDYHCL------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD  234 (280)
T ss_pred             CCCcccccCCceEEe------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc
Confidence            999986543321110      112236778999999988889999999999999999999 9999976544332211111


Q ss_pred             cccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       750 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      .      .....+...+..+.+++.+||..+|++||++ .+++..|+.+.
T Consensus       235 ~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~~~~~l~~~~  277 (280)
T cd05043         235 G------YRLAQPINCPDELFAVMACCWALDPEERPSF-SQLVQCLTDFH  277 (280)
T ss_pred             C------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHH
Confidence            0      1111223345789999999999999999999 78888887654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5.6e-35  Score=311.72  Aligned_cols=243  Identities=26%  Similarity=0.400  Sum_probs=197.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|.+.+.||+|+||.||+|...  +..|++|.+....  ......+.+|+.+++.++||||+++++++.  ...++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4777889999999999999875  5889999986542  223457889999999999999999999884  468999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++... ....+++..++.++.+++.||.|||+   +|++|+||||+||+++.++.++|+|||++..+.....
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            9999999998643 23568999999999999999999999   8999999999999999999999999999886654321


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||++.+..++.++|||||||++|+|++|+.||............  .....    ...+
T Consensus       157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~----~~~~  222 (256)
T cd08529         157 F--------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI--IRGVF----PPVS  222 (256)
T ss_pred             h--------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HcCCC----CCCc
Confidence            1        12234789999999999999999999999999999999999999766543221111  11111    1222


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...+..+.+++.+||+.+|++||++.+
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~  249 (256)
T cd08529         223 QMYSQQLAQLIDQCLTKDYRQRPDTFQ  249 (256)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHH
Confidence            244578999999999999999999943

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.2e-35  Score=317.02  Aligned_cols=254  Identities=23%  Similarity=0.365  Sum_probs=197.3

Q ss_pred             cCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--Cce
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVW  596 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~  596 (888)
                      +++|.+.+.||+|+||.||+|.+.+       ..|++|.+...... ....|.+|+.+++.++||||+++++++.  +..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4578899999999999999998854       56899987654322 2346899999999999999999999873  468


Q ss_pred             EEEEEecCCCChhhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC---ceeee
Q 002719          597 TLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLS  669 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~---~vKL~  669 (888)
                      ++||||+++++|.+++.....    ...+++..++.++.||+.||.|||+   ++++||||||+|||++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEec
Confidence            899999999999999864321    2358999999999999999999999   8999999999999998654   69999


Q ss_pred             ccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhc
Q 002719          670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTG  748 (888)
Q Consensus       670 DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~  748 (888)
                      |||+++.+........      .....++..|+|||++.+..++.++|||||||++|+|++ |..||.............
T Consensus       162 dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~  235 (277)
T cd05036         162 DFGMARDIYRASYYRK------GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT  235 (277)
T ss_pred             cCccccccCCccceec------CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999987633221110      112234578999999998999999999999999999997 999997544322111110


Q ss_pred             ccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       749 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                            ......+|...+..+.+++.+||+.+|.+||++ .+|++.|+
T Consensus       236 ------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-~~vl~~l~  276 (277)
T cd05036         236 ------GGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-ATILERIQ  276 (277)
T ss_pred             ------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHhh
Confidence                  011122344456789999999999999999999 66666553

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-35  Score=320.47  Aligned_cols=259  Identities=27%  Similarity=0.461  Sum_probs=197.1

Q ss_pred             CCCCccceeeecCceEEEEEEECC----------------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH----------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVG  590 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~----------------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g  590 (888)
                      ++|.+.+.||+|+||.||++...+                ..||+|.+...... ....|.+|+++|++++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            478889999999999999987542                24899998764322 2346889999999999999999999


Q ss_pred             cc--CCceEEEEEecCCCChhhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEE
Q 002719          591 AC--PEVWTLVYEYLPNGSLEDRLSCKD---------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL  659 (888)
Q Consensus       591 ~~--~~~~~LV~Ey~~ggsL~~~L~~~~---------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NIL  659 (888)
                      ++  ....++||||+++++|.+++....         ....+++..++.++.|++.||.|||+   ++++||||||+|||
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence            88  457889999999999999885432         11347889999999999999999999   89999999999999


Q ss_pred             EcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 002719          660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI  737 (888)
Q Consensus       660 l~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~  737 (888)
                      ++.++.+||+|||++.........      .......++..|+|||++.++.++.++|||||||++|+|++  |..||..
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~  235 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL  235 (295)
T ss_pred             EcCCCcEEecccccccccccCcce------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            999999999999998765432111      11122345789999999998899999999999999999998  6678865


Q ss_pred             chHHHHHHhhccc-ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          738 TKEVQYALDTGKL-KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       738 ~~~~~~~~~~~~~-~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ............. ...........+...+..+.+|+.+||+.+|.+||++ ++|.+.|+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~-~~i~~~l~  294 (295)
T cd05097         236 LSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF-NKIHHFLR  294 (295)
T ss_pred             cChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHh
Confidence            4332211111110 0000111111222345789999999999999999999 77777664

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.1e-35  Score=334.41  Aligned_cols=246  Identities=25%  Similarity=0.306  Sum_probs=193.9

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      ..++|.+.+.||+|+||.||++...  +..||+|++....   ......+.+|+.+++.++||||+++++++.  ...++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            3457899999999999999999876  5789999986432   122345788999999999999999999874  46899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||++||+|.+++..    ..+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++....
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999998842    347888999999999999999999   899999999999999999999999999997654


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      .....       ......||+.|+|||++.+.    .++.++|||||||+||+|++|++||.................  
T Consensus       194 ~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--  264 (370)
T cd05596         194 ANGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN--  264 (370)
T ss_pred             CCCcc-------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--
Confidence            32211       11234599999999998653    478899999999999999999999976654322211110000  


Q ss_pred             CCCCCCCCh--hhHHHHHHHHHHHhhcCCCC--CCChHHHH
Q 002719          755 DPLAGDWPF--VQAEQLANLAMRCCEMSRKS--RPELGKDV  791 (888)
Q Consensus       755 d~~~~~~p~--~~~~~l~~Li~~Cl~~dP~~--RPs~~~~v  791 (888)
                       .  ..+|.  ..+..+.+|+.+||..+|.+  ||++ +++
T Consensus       265 -~--~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~-~el  301 (370)
T cd05596         265 -S--LTFPDDIEISKQAKDLICAFLTDREVRLGRNGV-DEI  301 (370)
T ss_pred             -c--CCCCCcCCCCHHHHHHHHHHccChhhccCCCCH-HHH
Confidence             0  11121  34678999999999999987  9998 444

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=5e-35  Score=319.20  Aligned_cols=257  Identities=24%  Similarity=0.399  Sum_probs=199.4

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~  595 (888)
                      ..++|.+.+.||+|+||.||+|..+       +..||+|.+...... ....+.+|+.+++.++||||+++++++  .+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567999999999999999999754       247999987644321 234578899999999999999999987  346


Q ss_pred             eEEEEEecCCCChhhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceee
Q 002719          596 WTLVYEYLPNGSLEDRLSCKD-------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL  668 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL  668 (888)
                      .++||||+++|+|.+++....       ....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence            899999999999999996432       12456778899999999999999999   89999999999999999999999


Q ss_pred             eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhh
Q 002719          669 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDT  747 (888)
Q Consensus       669 ~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~  747 (888)
                      +|||+++..........      .....++..|+|||.+.++.++.++|||||||++|+|++ |.+||........... 
T Consensus       161 ~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~-  233 (288)
T cd05061         161 GDFGMTRDIYETDYYRK------GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-  233 (288)
T ss_pred             CcCCccccccccccccc------cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-
Confidence            99999886543221111      112235778999999999999999999999999999998 7889975443321111 


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                           +........+...+..+.+++.+||+.+|.+||++ .++++.|+..
T Consensus       234 -----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~ll~~l~~~  278 (288)
T cd05061         234 -----VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-LEIVNLLKDD  278 (288)
T ss_pred             -----HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHhh
Confidence                 01111111233345789999999999999999999 6776666653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.1e-34  Score=319.00  Aligned_cols=284  Identities=25%  Similarity=0.445  Sum_probs=216.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--C----eEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~----~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV  599 (888)
                      .+|...+.||+|+||.||+|.+.  +    ..||+|.+....... ...+.+|+.+++.++||||++++|+| ....+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            46778889999999999999874  3    257999887543222 23688999999999999999999987 3457799


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +||+++|+|.+++...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus        87 ~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          87 TQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             ehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence            9999999999998533  3358899999999999999999999   8999999999999999999999999999986643


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccccCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDP  756 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~ld~  756 (888)
                      ......      .....++..|+|||.+.+..++.++|||||||++|+|++ |..||......  ......+..   + +
T Consensus       162 ~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~-~  231 (303)
T cd05110         162 DEKEYN------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER---L-P  231 (303)
T ss_pred             cccccc------cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC---C-C
Confidence            221110      112345778999999998899999999999999999997 89999654322  111111110   0 1


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccccCCCCCCcCCCCCCCCCCCCCCcchhhhhhhcC
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQD  833 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~~~~~~~~~~~~~~~~~~P~~f~cPi~~evm~d  833 (888)
                          .+...+..+.+++..||..+|.+||++ .+++..|..+.....  .........+...|.....|+|++.|.+
T Consensus       232 ----~~~~~~~~~~~li~~c~~~~p~~Rp~~-~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (303)
T cd05110         232 ----QPPICTIDVYMVMVKCWMIDADSRPKF-KELAAEFSRMARDPQ--RYLVIQGDDRMKLPSPNDSKFFQNLLDE  301 (303)
T ss_pred             ----CCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHhchh--hheeeccCCcCCCCCCchhhHHhccccc
Confidence                122334679999999999999999999 677777777643321  1222334555667888889999887754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1e-34  Score=318.45  Aligned_cols=246  Identities=24%  Similarity=0.383  Sum_probs=198.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ..+|...+.||+|+||.||+|...  +..|++|.+..........+.+|+.+++.++||||+++++.|  ....++||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            347888999999999999999864  578999998876555567789999999999999999999987  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++.    ...+++..+..++.|++.||.|||+   .||+||||||+|||++.++.+||+|||++........
T Consensus        99 ~~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          99 LAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             cCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            99999999884    2357899999999999999999999   8999999999999999999999999999876433211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||.+.+..++.++|||||||++|+|++|++||...............  ...+  ...+
T Consensus       172 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~--~~~~  239 (296)
T cd06654         172 K--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN--GTPE--LQNP  239 (296)
T ss_pred             c--------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC--CCCC--CCCc
Confidence            1        12235889999999999888999999999999999999999999765432222111110  0001  1123


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ...+..+.+|+.+||..+|.+||++ .+++
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~-~eil  268 (296)
T cd06654         240 EKLSAIFRDFLNRCLDMDVEKRGSA-KELL  268 (296)
T ss_pred             cccCHHHHHHHHHHCcCCcccCcCH-HHHh
Confidence            3345779999999999999999999 4443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.1e-35  Score=331.19  Aligned_cols=246  Identities=25%  Similarity=0.309  Sum_probs=194.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|.+...||+|+||.||++...  +..||||++.....   .....+.+|+.+++.++||||+++++++.  +..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            36888999999999999999875  57899999976432   23456889999999999999999999873  4689999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++..+...
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            999999999998543  2468999999999999999999999   89999999999999999999999999999866433


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLA------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~------~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      ...       ......||+.|+|||++.      ...++.++|||||||+||+|++|+.||..................+
T Consensus       156 ~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~  228 (330)
T cd05601         156 KMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL  228 (330)
T ss_pred             Cce-------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc
Confidence            211       112345899999999987      4567899999999999999999999997654433222111111111


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .   .......+..+.+|+..||. +|.+||++.+
T Consensus       229 ~---~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~  259 (330)
T cd05601         229 K---FPEDPKVSSDFLDLIQSLLC-GQKERLGYEG  259 (330)
T ss_pred             C---CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHH
Confidence            0   00112345779999999998 9999999943

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.1e-35  Score=331.10  Aligned_cols=234  Identities=24%  Similarity=0.321  Sum_probs=186.2

Q ss_pred             ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      +.||+|+||.||+|...  +..||+|++.....   .....+.+|+.++.++ +||||+++++++  .+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999876  47899999976432   2234578999999888 699999999987  4578999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|..++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.........  
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--  152 (327)
T cd05617          81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--  152 (327)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc--
Confidence            999988842   3469999999999999999999999   89999999999999999999999999998743221110  


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHhhcccccccCCCCC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK------EVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~------~~~~~~~~~~~~~~ld~~~~  759 (888)
                            .....||+.|+|||++.+..++.++|||||||+||+|++|++||....      .........     . ....
T Consensus       153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-----~-~~~~  220 (327)
T cd05617         153 ------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-----L-EKPI  220 (327)
T ss_pred             ------eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-----H-hCCC
Confidence                  123458999999999999999999999999999999999999995321      111111110     0 0111


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..|...+..+.+++.+||..||.+||+.
T Consensus       221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         221 RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            2344456789999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-34  Score=308.64  Aligned_cols=246  Identities=31%  Similarity=0.512  Sum_probs=199.5

Q ss_pred             ceeeecCceEEEEEEEC-----CeEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~g  605 (888)
                      +.||+|+||.||+|...     +..|++|.+....... ...+.+|+.++..++|+||+++++++.  ...++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            36999999999999886     6689999998654433 567899999999999999999999874  478899999999


Q ss_pred             CChhhhhhccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          606 GSLEDRLSCKDN------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       606 gsL~~~L~~~~~------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ++|.+++.....      ...+++..++.++.|++.||.|||+   ++++||||+|+||+++.++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999965421      3679999999999999999999999   8999999999999999999999999999987654


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....      ......+++.|+|||.+....++.++|||||||++|+|++ |.+||..............      ...
T Consensus       158 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~------~~~  225 (262)
T cd00192         158 DDYYR------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK------GYR  225 (262)
T ss_pred             ccccc------cccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc------CCC
Confidence            33110      1123457889999999988899999999999999999999 6999976644332211111      111


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ...+...+..+.+++.+||..+|.+||++ .++++.|
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l  261 (262)
T cd00192         226 LPKPEYCPDELYELMLSCWQLDPEDRPTF-SELVERL  261 (262)
T ss_pred             CCCCccCChHHHHHHHHHccCCcccCcCH-HHHHHhh
Confidence            22334446789999999999999999999 6666655

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=9e-35  Score=317.68  Aligned_cols=260  Identities=27%  Similarity=0.457  Sum_probs=200.1

Q ss_pred             cCCCCccceeeecCceEEEEEEECC------------------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeee
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH------------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVT  587 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~------------------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~  587 (888)
                      ..+|.+.+.||+|+||.||++....                  ..||+|.+...... ....+.+|+.++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3478899999999999999987643                  45899998765322 3457889999999999999999


Q ss_pred             eecccC--CceEEEEEecCCCChhhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCc
Q 002719          588 LVGACP--EVWTLVYEYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN  657 (888)
Q Consensus       588 l~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~N  657 (888)
                      ++++|.  +..++||||+++++|.+++....        ....+++..++.++.|++.||.|||+   ++|+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence            999884  57899999999999999985432        12368999999999999999999999   899999999999


Q ss_pred             EEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCC
Q 002719          658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPAL  735 (888)
Q Consensus       658 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt--G~~Pf  735 (888)
                      |+++.++.++|+|||++..........      ......+++.|+|||++.++.++.++|||||||++|+|++  |..||
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~  234 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYR------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY  234 (296)
T ss_pred             eeecCCCceEEccccceeecccCccee------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence            999999999999999987654322111      1123346789999999988899999999999999999998  67888


Q ss_pred             CCchHHHHHHhhccc-ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          736 GITKEVQYALDTGKL-KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       736 ~~~~~~~~~~~~~~~-~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ............... ...........+...+..+.+|+.+||+.+|.+||++ .+|.+.|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~-~el~~~L~  295 (296)
T cd05051         235 EHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF-REIHLFLQ  295 (296)
T ss_pred             CCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH-HHHHHHhc
Confidence            654332221111111 0000111111233445789999999999999999999 67776664

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=9.6e-35  Score=313.29  Aligned_cols=248  Identities=28%  Similarity=0.388  Sum_probs=195.7

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccC--------
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--------  593 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--------  593 (888)
                      .+++.|...+.||+|+||.||+|...  +..||+|.+.... .....+.+|+.++.++ +||||++++++|.        
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            45678999999999999999999875  5789999987543 3456788999999998 7999999999873        


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...++||||+++|+|.+++... ....+++..+..++.|++.||.|||+   ++|+|+||||+||+++.++.+||+|||+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence            3478999999999999998543 23468899999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG  748 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~  748 (888)
                      +........        ......|++.|+|||++.     +..++.++|||||||++|+|++|.+||.............
T Consensus       158 ~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~  229 (272)
T cd06637         158 SAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP  229 (272)
T ss_pred             ceecccccc--------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh
Confidence            876533211        112345899999999986     3358889999999999999999999996544332222111


Q ss_pred             ccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       749 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .     .+.....+...+..+.+|+.+||..+|.+||++ .++
T Consensus       230 ~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~i  266 (272)
T cd06637         230 R-----NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTT-EQL  266 (272)
T ss_pred             c-----CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCH-HHH
Confidence            1     000111112334679999999999999999999 444

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=8.7e-35  Score=315.75  Aligned_cols=239  Identities=24%  Similarity=0.325  Sum_probs=187.0

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL  608 (888)
                      ||+|+||.||++...  +..||+|.+......   ....+..|++++++++||||+++++++.  ...++||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999875  688999998653221   2334567999999999999999998873  468899999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++.... ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.++|+|||++........      
T Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~------  150 (277)
T cd05607          81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT------  150 (277)
T ss_pred             HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce------
Confidence            98885332 3458899999999999999999999   8999999999999999999999999999876543211      


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                         .....|+..|+|||++.+..++.++|||||||++|+|++|+.||......  ...+........+..    .....+
T Consensus       151 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  223 (277)
T cd05607         151 ---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----EHQNFT  223 (277)
T ss_pred             ---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----ccccCC
Confidence               12235899999999999889999999999999999999999999653221  111111111111110    011345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..+.+|+.+||+.||.+||++.+.+
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccch
Confidence            7799999999999999999994433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.4e-34  Score=310.60  Aligned_cols=251  Identities=31%  Similarity=0.484  Sum_probs=200.5

Q ss_pred             CCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN  605 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~g  605 (888)
                      .+|.+...||+|+||.||+|.+.+ ..||+|.+.... .....+.+|+.+++.++|||++++++++. +..++||||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            458888899999999999998765 579999886543 23467899999999999999999999874 467899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.+++.... ...+++..+..++.+++.||.|||+   .|++|+||||+||+++.++.++|+|||++.......... 
T Consensus        85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~-  159 (260)
T cd05069          85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA-  159 (260)
T ss_pred             CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc-
Confidence            99999985432 3458899999999999999999999   899999999999999999999999999997654322111 


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            .....++..|+|||.+.+..++.++|||||||++|+|+| |.+||..............  . .   ....+..
T Consensus       160 ------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~--~-~---~~~~~~~  227 (260)
T cd05069         160 ------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER--G-Y---RMPCPQG  227 (260)
T ss_pred             ------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--C-C---CCCCCcc
Confidence                  112236778999999988899999999999999999999 9999976543322111110  0 0   1112334


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .+..+.+++.+||..+|.+||++ +.+.+.|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~  259 (260)
T cd05069         228 CPESLHELMKLCWKKDPDERPTF-EYIQSFLED  259 (260)
T ss_pred             cCHHHHHHHHHHccCCcccCcCH-HHHHHHHhc
Confidence            55789999999999999999999 777777754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-36  Score=328.54  Aligned_cols=257  Identities=27%  Similarity=0.481  Sum_probs=212.6

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCce
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVW  596 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~  596 (888)
                      ++++-...+....++||.|.||.||.|.|+.  ..||||.++... ...++|..|+.+|+.++|||+|+|+|+|  ...+
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            4455555566778899999999999999985  679999998654 3467899999999999999999999999  4579


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      |||.|||..|+|.++|+..+. ..++.-..+.++.||..|+.||..   +++|||||...|+|+.++..+|++|||++++
T Consensus       339 YIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRl  414 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRL  414 (1157)
T ss_pred             EEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhh
Confidence            999999999999999975543 456667788999999999999999   8999999999999999999999999999999


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccc
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNL  753 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~  753 (888)
                      +..+.+...-       ...-.+-|.|||-|....++.|+|||+|||+|||+.| |-.||.+.+..  ...++.+     
T Consensus       415 MtgDTYTAHA-------GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-----  482 (1157)
T KOG4278|consen  415 MTGDTYTAHA-------GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-----  482 (1157)
T ss_pred             hcCCceeccc-------CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-----
Confidence            8765543322       2223678999999999999999999999999999988 88999765432  2222332     


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                         ...+-|..+++.+++|++.||+.+|.+||++ .++.+.++.+
T Consensus       483 ---yRM~~PeGCPpkVYeLMraCW~WsPsDRPsF-aeiHqafEtm  523 (1157)
T KOG4278|consen  483 ---YRMDGPEGCPPKVYELMRACWNWSPSDRPSF-AEIHQAFETM  523 (1157)
T ss_pred             ---ccccCCCCCCHHHHHHHHHHhcCCcccCccH-HHHHHHHHHH
Confidence               2233466778999999999999999999999 5666666554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.4e-34  Score=311.83  Aligned_cols=253  Identities=26%  Similarity=0.391  Sum_probs=197.1

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ++.+++++.....||+|+||.||+|.+.  +..|++|.+..........+.+|+.+++.++||||+++++++  .+..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            4556777777889999999999999876  467999998766555556799999999999999999999988  457889


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeecccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFL  677 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~  677 (888)
                      ||||+++++|.+++.........++..+..++.||+.||.|||+   ++|+||||||+||+++. ++.++|+|||++...
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            99999999999998643221122788899999999999999999   89999999999999976 679999999998765


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ......        .....|++.|+|||++.+..  ++.++||||||+++|+|++|++||................    
T Consensus       160 ~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~----  227 (268)
T cd06624         160 AGINPC--------TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF----  227 (268)
T ss_pred             ccCCCc--------cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh----
Confidence            432111        11234789999999987653  7889999999999999999999996433221111111011    


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ......|...+..+.+|+.+||+.+|.+||++ .++
T Consensus       228 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~l  262 (268)
T cd06624         228 KIHPEIPESLSAEAKNFILRCFEPDPDKRASA-HDL  262 (268)
T ss_pred             ccCCCCCcccCHHHHHHHHHHcCCCchhCCCH-HHH
Confidence            11122344556789999999999999999999 444

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=6.4e-35  Score=333.24  Aligned_cols=261  Identities=25%  Similarity=0.408  Sum_probs=202.9

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCCC-hhHHHHHHHHHHhcC-CCCeeeeecccC
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKIR-HPNLVTLVGACP  593 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~-HpnIv~l~g~~~  593 (888)
                      +....++|.+.++||+|+||.||+|.+.+       ..||+|++....... ...+.+|+.+|.++. ||||++++|+|.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            34445678889999999999999998643       579999997643222 346889999999997 999999999984


Q ss_pred             --CceEEEEEecCCCChhhhhhccC-------------------------------------------------------
Q 002719          594 --EVWTLVYEYLPNGSLEDRLSCKD-------------------------------------------------------  616 (888)
Q Consensus       594 --~~~~LV~Ey~~ggsL~~~L~~~~-------------------------------------------------------  616 (888)
                        ...++||||+++|+|.+++....                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence              46899999999999999985431                                                       


Q ss_pred             ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCC
Q 002719          617 ----------------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA  656 (888)
Q Consensus       617 ----------------------------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~  656 (888)
                                                              ....+++..++.|+.||+.||.|||+   ++|+||||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcc
Confidence                                                    11346788889999999999999999   89999999999


Q ss_pred             cEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 002719          657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPAL  735 (888)
Q Consensus       657 NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf  735 (888)
                      |||++.++.+||+|||+++..........      .....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~  342 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYIS------KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY  342 (401)
T ss_pred             eEEEeCCCEEEEEecCcceeccccccccc------CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999986533221110      112346789999999998889999999999999999998 89998


Q ss_pred             CCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          736 GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ............  +..   ......|...+..+.+|+.+||..+|.+||++ .+|+..|+.+
T Consensus       343 ~~~~~~~~~~~~--~~~---~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-~ell~~L~~~  399 (401)
T cd05107         343 PELPMNEQFYNA--IKR---GYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF-SQLVHLVGDL  399 (401)
T ss_pred             CCCCchHHHHHH--HHc---CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHH
Confidence            654322211111  000   00111233456789999999999999999999 7888888764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.2e-34  Score=309.95  Aligned_cols=246  Identities=28%  Similarity=0.409  Sum_probs=196.1

Q ss_pred             eeeecCceEEEEEEECC-----eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||+|.+..     ..||||.+..... .....+.+|+.++++++||||+++++.+. ...++||||+++|+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~   81 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS   81 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence            58999999999998743     3699999987655 34567899999999999999999999874 46789999999999


Q ss_pred             hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCc
Q 002719          608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT  687 (888)
Q Consensus       608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~  687 (888)
                      |.+++..... ..+++..++.++.|++.||.|||.   ++++|+||||+||+++.++.+||+|||++..+.......   
T Consensus        82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~---  154 (257)
T cd05040          82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY---  154 (257)
T ss_pred             HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccce---
Confidence            9999965432 568999999999999999999999   899999999999999999999999999998765432111   


Q ss_pred             cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       688 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                        .......++..|+|||++.+..++.++|||||||++|+|++ |.+||................     .....+...+
T Consensus       155 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  227 (257)
T cd05040         155 --VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-----ERLERPEACP  227 (257)
T ss_pred             --ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-----CcCCCCccCC
Confidence              11123457889999999998899999999999999999998 999996544333221111111     1111223345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+.+++.+||..+|.+||++ .++++.|
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~-~~~~~~l  255 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTF-AALREFL  255 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCH-HHHHHHh
Confidence            789999999999999999999 6666554

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.4e-35  Score=327.93  Aligned_cols=241  Identities=24%  Similarity=0.298  Sum_probs=187.6

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHH-HHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~-iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|.+.  +..||+|++.....   .....+..|.. +++.++||||+++++++  .+..++||||+++|
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            5999999999999886  46799999875321   12233444444 56788999999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+++.......    
T Consensus        82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~----  151 (325)
T cd05602          82 ELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG----  151 (325)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC----
Confidence            99998853   3457888999999999999999999   8999999999999999999999999999875322111    


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.............  ..     ....+...+
T Consensus       152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~-----~~~~~~~~~  220 (325)
T cd05602         152 ----TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--NK-----PLQLKPNIT  220 (325)
T ss_pred             ----CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH--hC-----CcCCCCCCC
Confidence                0123458999999999999999999999999999999999999997655433211110  00     011223345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ..+.+++.+||+.+|.+||+..+.+.++++
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i~~  250 (325)
T cd05602         221 NSARHLLEGLLQKDRTKRLGAKDDFMEIKN  250 (325)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCHHHHhc
Confidence            789999999999999999998555544443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.1e-35  Score=328.35  Aligned_cols=240  Identities=24%  Similarity=0.279  Sum_probs=187.5

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHH-HHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~-iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|...  +..||+|++.....   .....+..|.. +++.++||||+++++++  .+..++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG   81 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence            5999999999999875  67899999875422   22234555655 46778999999999887  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|..++.   ....+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++........    
T Consensus        82 ~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~----  151 (325)
T cd05604          82 ELFFHLQ---RERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD----  151 (325)
T ss_pred             CHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC----
Confidence            9998884   33568999999999999999999999   8999999999999999999999999999874322111    


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                          ......||+.|+|||++.+..++.++|||||||++|+|++|.+||..............  ..     ...+...+
T Consensus       152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~--~~-----~~~~~~~~  220 (325)
T cd05604         152 ----TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH--KP-----LVLRPGAS  220 (325)
T ss_pred             ----CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc--CC-----ccCCCCCC
Confidence                01234589999999999999999999999999999999999999976543322111110  00     01122345


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+.+++.+||+.+|.+||++...+.+++
T Consensus       221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~i~  249 (325)
T cd05604         221 LTAWSILEELLEKDRQRRLGAKEDFLEIQ  249 (325)
T ss_pred             HHHHHHHHHHhccCHHhcCCCCCCHHHHh
Confidence            67899999999999999999854444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.7e-34  Score=327.13  Aligned_cols=247  Identities=23%  Similarity=0.303  Sum_probs=189.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccCC-------ceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-------~~~  597 (888)
                      +|++.+.||+|+||.||++...  ++.||||.+.....  .....+.+|+.+|+.++||||+++++++..       ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            4788899999999999999864  68899999865322  224568899999999999999999998732       578


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||+. ++|.+.+.   ....+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++...
T Consensus        81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999996 57877773   33568999999999999999999999   89999999999999999999999999999865


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------  750 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~------  750 (888)
                      ......       ......+++.|+|||++.+. .++.++|||||||++|+|++|++||...............      
T Consensus       154 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~  226 (372)
T cd07853         154 EPDESK-------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL  226 (372)
T ss_pred             ccCccc-------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            432111       11234578999999999774 5789999999999999999999999765433211110000      


Q ss_pred             ---------------ccccCC-C---CCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          751 ---------------KNLLDP-L---AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       751 ---------------~~~ld~-~---~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                     .....+ .   ........+..+.+|+.+||+.||.+||++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e  284 (372)
T cd07853         227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAAD  284 (372)
T ss_pred             HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHH
Confidence                           000000 0   00111223567899999999999999999943

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=5.6e-35  Score=321.91  Aligned_cols=259  Identities=24%  Similarity=0.385  Sum_probs=202.8

Q ss_pred             cCCCCccceeeecCceEEEEEEECC---------eEEEEEEecCCC-CCChhHHHHHHHHHHhc-CCCCeeeeecccC--
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--  593 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~---------~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--  593 (888)
                      .++|.+.+.||+|+||.||++...+         ..||+|.+.... ......+.+|+.+++.+ +||||++++++|.  
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3579999999999999999997532         469999987542 22245688899999999 7999999999883  


Q ss_pred             CceEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL  660 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl  660 (888)
                      +..++||||+++|+|.+++.....             ...+++..++.++.|++.||.|||+   +|++||||||+|||+
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEE
Confidence            468899999999999999964321             1358899999999999999999999   899999999999999


Q ss_pred             cCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCch
Q 002719          661 DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITK  739 (888)
Q Consensus       661 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~  739 (888)
                      +.++.+||+|||++...........      .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||....
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~  247 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKK------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  247 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhc------cccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence            9999999999999876543211110      011234578999999998899999999999999999998 889987654


Q ss_pred             HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccccc
Q 002719          740 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       740 ~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~  801 (888)
                      .......... .     .....+...+..+.+|+.+||..+|.+||++ .++++.|+.+.+.
T Consensus       248 ~~~~~~~~~~-~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~evl~~l~~~~~~  302 (307)
T cd05098         248 VEELFKLLKE-G-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRILAL  302 (307)
T ss_pred             HHHHHHHHHc-C-----CCCCCCCcCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHHH
Confidence            3221111110 0     1112233455789999999999999999999 7888888877554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.5e-35  Score=319.38  Aligned_cols=253  Identities=26%  Similarity=0.429  Sum_probs=196.1

Q ss_pred             CCCCccceeeecCceEEEEEEECC----eEEEEEEecCCC-CCChhHHHHHHHHHHhc-CCCCeeeeecccC--CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~~LV  599 (888)
                      ++|.+...||+|+||.||+|....    ..+++|.++... ......+.+|+.++.++ +||||+++++++.  ...++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            468888999999999999998753    347888877432 22245688999999999 7999999999884  468899


Q ss_pred             EEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          600 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      |||+++|+|.+++....             ....+++..++.++.|++.||.|||+   +||+||||||+|||++.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            99999999999985432             12358899999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL  745 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~  745 (888)
                      ||+|||++........         ......+..|+|||++.+..++.++|||||||++|+|++ |.+||..........
T Consensus       159 kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~  229 (297)
T cd05089         159 KIADFGLSRGEEVYVK---------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE  229 (297)
T ss_pred             EECCcCCCccccceec---------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            9999999864221100         011123567999999988899999999999999999997 999996554332211


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      ..      ........+...+..+.+|+.+||+.+|.+||++ .++++.|+.+.
T Consensus       230 ~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~~  276 (297)
T cd05089         230 KL------PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPF-AQISVQLSRML  276 (297)
T ss_pred             HH------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHH
Confidence            11      1111112233455789999999999999999999 66666666554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1e-34  Score=315.39  Aligned_cols=243  Identities=25%  Similarity=0.375  Sum_probs=193.1

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      |++.+.||.|+||.||+|...  +..+++|.+..........+.+|+.+++.++||||++++++|  ....++||||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            567788999999999999886  467899988765444456788999999999999999999987  4578899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|..++..  ...++++..+..++.|++.||.|||+   .|++||||||+|||++.++.+||+|||++........   
T Consensus        87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---  158 (282)
T cd06643          87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ---  158 (282)
T ss_pred             CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccccc---
Confidence            999988753  23468999999999999999999999   8999999999999999999999999999875432211   


Q ss_pred             CccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                           ......|++.|+|||++.     +..++.++|||||||++|+|++|++||.................   + ...
T Consensus       159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~-~~~  229 (282)
T cd06643         159 -----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---P-TLA  229 (282)
T ss_pred             -----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC---C-CCC
Confidence                 112345899999999984     34578899999999999999999999976554333222211111   0 011


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .+...+..+.+|+.+||+.+|.+||++.+
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  258 (282)
T cd06643         230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQ  258 (282)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence            22334578999999999999999999943

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=309.60  Aligned_cols=248  Identities=25%  Similarity=0.385  Sum_probs=197.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ++|...+.||.|+||.||.+...  +..||+|.+......     ....+.+|+.++++++||||+++++++  .+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            47889999999999999999864  688999998754321     124688899999999999999999988  457899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++++|.+++..   ...+++..+..++.|++.||.|||+   .||+||||+|+||+++.++.++|+|||++....
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999998853   3458899999999999999999999   899999999999999999999999999987654


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .......     ......|+..|+|||++.+..++.++||||||+++|+|++|++||..............     ....
T Consensus       156 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----~~~~  225 (263)
T cd06625         156 TICSSGT-----GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-----QPTN  225 (263)
T ss_pred             ccccccc-----cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-----cCCC
Confidence            3211110     01233578899999999998899999999999999999999999965443322221111     1111


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ...+...+..+.+++.+||..+|.+||++ .+++
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~ll  258 (263)
T cd06625         226 PQLPSHVSPDARNFLRRTFVENAKKRPSA-EELL  258 (263)
T ss_pred             CCCCccCCHHHHHHHHHHhhcCcccCCCH-HHHh
Confidence            22344456789999999999999999999 4443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-36  Score=301.58  Aligned_cols=265  Identities=23%  Similarity=0.307  Sum_probs=206.2

Q ss_pred             hhcCCCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc-------CCc
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-------PEV  595 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~--~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-------~~~  595 (888)
                      ...++|.+.+.||+|||+.||++..  ++..+|+|++......+.+...+|++..++++||||+++++++       ...
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            4567899999999999999999864  4678999999888777788899999999999999999999986       235


Q ss_pred             eEEEEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      .||+++|...|+|.+.+.... .+..+++.+++.|+.+|++||.+||...+ +++||||||.|||+++.+.++|.|||.+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCc
Confidence            899999999999999997653 34479999999999999999999999553 6999999999999999999999999998


Q ss_pred             cccccccccCCC-ccccccCCCCCCcccCChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCchH----HHHHHh
Q 002719          675 RFLSQNEISSNN-TTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITKE----VQYALD  746 (888)
Q Consensus       675 ~~~~~~~~~~~~-~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~----~~~~~~  746 (888)
                      ....-....... ......+....|..|.|||.+.-   ...+.++|||||||+||.|+.|..||+..-.    +..++.
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~  256 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ  256 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee
Confidence            765432211110 11112233457999999999964   3578899999999999999999999952111    111111


Q ss_pred             hcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          747 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       747 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .+.+..   |.    ....++.+.+|+..|++.||.+||++ .+++..++.+
T Consensus       257 n~q~s~---P~----~~~yse~l~~lik~mlqvdP~qRP~i-~~ll~~~d~L  300 (302)
T KOG2345|consen  257 NAQISI---PN----SSRYSEALHQLIKSMLQVDPNQRPTI-PELLSKLDDL  300 (302)
T ss_pred             cccccc---CC----CCCccHHHHHHHHHHhcCCcccCCCH-HHHHHHHHhh
Confidence            111111   11    12257899999999999999999999 6666665543

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2e-34  Score=316.22  Aligned_cols=246  Identities=24%  Similarity=0.378  Sum_probs=199.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ..+|...+.||.|+||.||+|...  +..|+||.+..........+.+|+.+++.++||||+++++++  .+..++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            357899999999999999999864  688999998766555567789999999999999999999988  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|..++.    ...+++..+..++.+++.||.|||+   +|++||||||+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          98 LAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             cCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            99999999884    2358999999999999999999999   8999999999999999999999999999876543221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||.+.+..++.++|||||||++|+|++|++||...............  ....  ...+
T Consensus       171 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~~~~--~~~~  238 (296)
T cd06655         171 K--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--GTPE--LQNP  238 (296)
T ss_pred             c--------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCcc--cCCc
Confidence            1        12235889999999999888999999999999999999999999766543322211110  0001  1122


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...+..+.+|+.+||..+|.+||++.+.+
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il  267 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKELL  267 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence            33456799999999999999999994433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.2e-34  Score=309.57  Aligned_cols=248  Identities=26%  Similarity=0.459  Sum_probs=197.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCh---------hHHHHHHHHHHhcCCCCeeeeeccc--CCc
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---------SEFQQEIDILSKIRHPNLVTLVGAC--PEV  595 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~---------~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~  595 (888)
                      +|.+...||.|+||.||+|...  +..||+|.+........         +.+.+|+.++++++||||+++++++  .+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            3667788999999999999874  57899998876543322         4578899999999999999999987  457


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .++||||+++++|.+++..   ...+++..+..++.|++.||.|||+   +|++||||+|+||+++.++.+||+|||+++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence            8899999999999999943   3468899999999999999999999   899999999999999999999999999998


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ............  .......|+..|+|||.+.+..++.++|||||||++|+|++|+.||..............      
T Consensus       155 ~~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------  226 (267)
T cd06628         155 KLEANSLSTKTN--GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------  226 (267)
T ss_pred             ccccccccCCcc--ccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------
Confidence            765322111111  111234588999999999988899999999999999999999999976544332222111      


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ......+...+..+.+++.+||+.+|.+||++ .++
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i  261 (267)
T cd06628         227 NASPEIPSNISSEAIDFLEKTFEIDHNKRPTA-AEL  261 (267)
T ss_pred             cCCCcCCcccCHHHHHHHHHHccCCchhCcCH-HHH
Confidence            11122334456789999999999999999999 444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.7e-34  Score=313.52  Aligned_cols=250  Identities=26%  Similarity=0.356  Sum_probs=193.0

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|.+.+.||.|+||.||+|...  +..||||.+......  ....+.+|+.+++.++||||+++++++  ....++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4778889999999999999875  678999998754322  235688999999999999999999998  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +. ++|.+++........+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++........
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence            97 6888888654444679999999999999999999999   8999999999999999999999999999875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc------------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------  749 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~------------  749 (888)
                              ......+++.|+|||++.+. .++.++|||||||++|+|+||++||..............            
T Consensus       157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
T cd07861         157 --------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG  228 (285)
T ss_pred             --------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence                    11233578999999998754 578999999999999999999999976544322211100            


Q ss_pred             ------cccccC----CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          750 ------LKNLLD----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       750 ------~~~~ld----~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                            .....+    ..........+..+.+|+.+||+.||.+||++ +++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~~l  279 (285)
T cd07861         229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISA-KKA  279 (285)
T ss_pred             chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCH-HHH
Confidence                  000000    00000111235678899999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1e-34  Score=312.58  Aligned_cols=255  Identities=25%  Similarity=0.443  Sum_probs=199.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--C---eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~---~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      .++|+..+.||+|+||.||+|...  +   ..+|+|.+..... .....+.+|+.+++.++||||+++++++.  +..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            347888899999999999999875  2   3699998865422 22456889999999999999999999884  46889


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++++|.+++...  ...+++..+..++.|++.||.|||+   .|++||||||+||+++.++.+||+|||++....
T Consensus        84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          84 ITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            99999999999998532  3568999999999999999999999   899999999999999999999999999987654


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      .......     .......++.|+|||++.+..++.++|||||||++|+|++ |+.||...............      .
T Consensus       159 ~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~------~  227 (268)
T cd05063         159 DDPEGTY-----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG------F  227 (268)
T ss_pred             cccccce-----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC------C
Confidence            3221110     0111224567999999988889999999999999999997 99999654432221111111      1


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ....+...+..+.+++.+||..+|.+||++ .+|.+.|+.+
T Consensus       228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~-~~i~~~l~~~  267 (268)
T cd05063         228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRF-VDIVNLLDKL  267 (268)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence            111223345789999999999999999999 7787777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=8.7e-35  Score=313.71  Aligned_cols=253  Identities=26%  Similarity=0.404  Sum_probs=201.7

Q ss_pred             CCCCccceeeecCceEEEEEEECC-----eEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~  600 (888)
                      .+|.+.+.||+|+||.||+|.+..     ..|+||...... ....+.+.+|+.+++.++||||++++++|. +..++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            467888999999999999998653     369999887554 223457899999999999999999999874 4678999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...  ...+++..++.++.+++.||.|||+   ++++||||||+|||++.++.+||+|||++......
T Consensus        86 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          86 ELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            999999999999533  2358999999999999999999999   89999999999999999999999999998765433


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....       .+...++..|+|||.+....++.++|||||||++|+|++ |.+||..................      
T Consensus       161 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------  227 (270)
T cd05056         161 SYYK-------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL------  227 (270)
T ss_pred             ccee-------cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC------
Confidence            2111       112235678999999988889999999999999999986 99999765543322221111111      


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      ..+...+..+.+++.+||..+|.+||++ .+++..|+.+.
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~~~~~l~~~~  266 (270)
T cd05056         228 PMPPNCPPTLYSLMTKCWAYDPSKRPRF-TELKAQLSDIL  266 (270)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHH
Confidence            1233445789999999999999999999 77878877654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=8.6e-35  Score=319.84  Aligned_cols=260  Identities=23%  Similarity=0.385  Sum_probs=203.1

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCC-CCChhHHHHHHHHHHhc-CCCCeeeeecccC-
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP-  593 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~---------~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~-  593 (888)
                      ...+|.+...||+|+||.||+|.+.         +..||+|.+.... ......+.+|+.+++.+ +||||+++++++. 
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            3457888899999999999999752         2469999987542 22345788999999999 8999999999884 


Q ss_pred             -CceEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEE
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL  659 (888)
Q Consensus       594 -~~~~LV~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NIL  659 (888)
                       ...++||||+++|+|.+++.....             ...+++..++.++.||+.||.|||+   +||+||||||+|||
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEE
Confidence             468899999999999999864321             2357888999999999999999999   89999999999999


Q ss_pred             EcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCc
Q 002719          660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT  738 (888)
Q Consensus       660 l~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~  738 (888)
                      ++.++.+||+|||+++..........      .....+++.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  243 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  243 (304)
T ss_pred             EcCCCcEEECCCccceeccccccccc------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999986643321110      112346778999999988889999999999999999998 88888654


Q ss_pred             hHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccccc
Q 002719          739 KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       739 ~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~  801 (888)
                      ..........      .......+...+..+.+|+.+||..+|.+||++ .++++.|+.+...
T Consensus       244 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~e~l~~l~~~~~~  299 (304)
T cd05101         244 PVEELFKLLK------EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTF-KQLVEDLDRILTL  299 (304)
T ss_pred             CHHHHHHHHH------cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHHHHh
Confidence            4332211110      001111233455789999999999999999999 7888888876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.3e-34  Score=326.54  Aligned_cols=245  Identities=21%  Similarity=0.285  Sum_probs=188.6

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--------C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------~  594 (888)
                      .++|.+.+.||+|+||.||++...  +..||||++....  ......+.+|+.+++.++||||+++++++.        .
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            468999999999999999999875  5789999986542  223456889999999999999999999873        2


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..|+||||+.+ +|...+.     ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a  170 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  170 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence            46899999975 5666552     247888999999999999999999   89999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc------
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG------  748 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~------  748 (888)
                      +.......         .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.........      
T Consensus       171 ~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  241 (359)
T cd07876         171 RTACTNFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP  241 (359)
T ss_pred             cccccCcc---------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            75432211         123458999999999999999999999999999999999999997554321100000      


Q ss_pred             ----------ccccc-------------------cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          749 ----------KLKNL-------------------LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       749 ----------~~~~~-------------------ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                .....                   ..+.....+...+..+.+|+.+||..||.+||++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e  311 (359)
T cd07876         242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE  311 (359)
T ss_pred             cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence                      00000                   000000111123467899999999999999999943

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=330.87  Aligned_cols=189  Identities=24%  Similarity=0.313  Sum_probs=161.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .+|.+.+.||+|+||.||++...  +..||||...      ...+.+|+.+|+.|+||||++++++|  ....++||||+
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            46999999999999999999876  5789999753      23578999999999999999999987  45688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      . ++|..++..   ...+++..++.|+.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.........
T Consensus       166 ~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        166 K-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             C-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            5 688888743   3458899999999999999999999   89999999999999999999999999998753321111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG  736 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~  736 (888)
                             ......||+.|+|||++.+..++.++|||||||+||+|+||..||.
T Consensus       239 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        239 -------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             -------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence                   1123469999999999999999999999999999999999997763

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2e-34  Score=313.43  Aligned_cols=257  Identities=26%  Similarity=0.404  Sum_probs=201.3

Q ss_pred             ChhhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeeccc---
Q 002719          519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC---  592 (888)
Q Consensus       519 ~~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~---  592 (888)
                      .++.+..+.++|.+...||+|+||.||++...  ++.+|+|++.... .....+.+|+.+++.+ +||||++++++|   
T Consensus         9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            45667778899999999999999999999875  5789999886532 2245688999999999 699999999986   


Q ss_pred             ----CCceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCcee
Q 002719          593 ----PEVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK  667 (888)
Q Consensus       593 ----~~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vK  667 (888)
                          .+..++||||+++++|.+++... .....+++..+..++.|++.||.|||+   ++|+||||||+||+++.++.+|
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEE
Confidence                13579999999999999987532 234568899999999999999999999   8999999999999999999999


Q ss_pred             eeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 002719          668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQ  742 (888)
Q Consensus       668 L~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~  742 (888)
                      |+|||++.........        .....|++.|+|||++..     ..++.++|||||||++|+|++|++||.......
T Consensus       165 l~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~  236 (286)
T cd06638         165 LVDFGVSAQLTSTRLR--------RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR  236 (286)
T ss_pred             EccCCceeecccCCCc--------cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH
Confidence            9999998765432111        123358999999999853     457889999999999999999999997654433


Q ss_pred             HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          743 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       743 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ........   ..+ ....+...+..+.+|+.+||+.+|.+||++ .+++
T Consensus       237 ~~~~~~~~---~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~ell  281 (286)
T cd06638         237 ALFKIPRN---PPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTV-SDLL  281 (286)
T ss_pred             HHhhcccc---CCC-cccCCCCcCHHHHHHHHHHccCCcccCCCH-HHHh
Confidence            22221111   000 011122334679999999999999999999 4443

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=7.7e-35  Score=320.48  Aligned_cols=252  Identities=26%  Similarity=0.435  Sum_probs=194.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--Ce--EEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeecccC--CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HM--QVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~--~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~~LV  599 (888)
                      ++|.+.+.||+|+||.||+|.+.  +.  .+++|.+..... .....+.+|+.++.++ +||||+++++++.  +..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            46888899999999999999875  33  467887764322 2235688999999999 8999999999884  468999


Q ss_pred             EEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          600 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                      |||+++|+|.+++....             ....+++..++.++.|++.||.|||+   +|++||||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence            99999999999986432             12368899999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL  745 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~  745 (888)
                      ||+|||++.......  .       .....++..|+|||++.+..++.++|||||||++|+|+| |.+||..........
T Consensus       164 kl~dfg~~~~~~~~~--~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  234 (303)
T cd05088         164 KIADFGLSRGQEVYV--K-------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE  234 (303)
T ss_pred             EeCccccCcccchhh--h-------cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence            999999986322110  0       111234678999999988889999999999999999998 999996544332211


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..      ........+...+..+.+|+.+||+.+|.+||++ ++++..|+.+
T Consensus       235 ~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~il~~l~~~  280 (303)
T cd05088         235 KL------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRM  280 (303)
T ss_pred             HH------hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHH
Confidence            11      0111111233345679999999999999999999 5566666554

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=5.3e-35  Score=331.12  Aligned_cols=246  Identities=24%  Similarity=0.328  Sum_probs=191.1

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      ..++|.+.+.||+|+||.||++...  +..||+|++....   ......+.+|+.+++.++||||+++++++.  +..++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            3457899999999999999999886  5789999986422   122345889999999999999999999883  46899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++|+|.+++..    ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..+.
T Consensus       121 v~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         121 VMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence            9999999999999842    247889999999999999999999   899999999999999999999999999998654


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      .....       ......||+.|+|||++.+.    .++.++|||||||+||+|++|++||.................  
T Consensus       194 ~~~~~-------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~--  264 (370)
T cd05621         194 ETGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN--  264 (370)
T ss_pred             cCCce-------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--
Confidence            32211       11234699999999999754    378899999999999999999999976554322211110000  


Q ss_pred             CCCCCCCC--hhhHHHHHHHHHHHhhcCCCC--CCChHHHH
Q 002719          755 DPLAGDWP--FVQAEQLANLAMRCCEMSRKS--RPELGKDV  791 (888)
Q Consensus       755 d~~~~~~p--~~~~~~l~~Li~~Cl~~dP~~--RPs~~~~v  791 (888)
                         ...+|  ...+..+.+++..||..++..  ||++ .++
T Consensus       265 ---~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~-~e~  301 (370)
T cd05621         265 ---SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGV-EEI  301 (370)
T ss_pred             ---ccCCCCcccCCHHHHHHHHHHccCchhccCCCCH-HHH
Confidence               01112  123567899999999855543  7888 444

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.3e-34  Score=315.58  Aligned_cols=252  Identities=27%  Similarity=0.485  Sum_probs=198.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--Cce
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW  596 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~  596 (888)
                      .++|.+...||+|+||.||++...       +..||+|++..... .....+.+|+.+++.++||||++++++|.  +..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            457889999999999999999863       46799999875432 22356889999999999999999999884  468


Q ss_pred             EEEEEecCCCChhhhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCc
Q 002719          597 TLVYEYLPNGSLEDRLSCKD-------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN  657 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~-------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~N  657 (888)
                      ++||||+++|+|.+++....                   ....+++..++.++.|++.||.|||.   ++++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence            99999999999999985321                   12357889999999999999999999   899999999999


Q ss_pred             EEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 002719          658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG  736 (888)
Q Consensus       658 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~  736 (888)
                      ||++.++.+||+|||++...........      .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~  234 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKA------SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY  234 (288)
T ss_pred             eEecCCCceEECccccceecccCccccc------cCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999875533221110      111234678999999988899999999999999999997 888885


Q ss_pred             CchHHHH--HHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          737 ITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       737 ~~~~~~~--~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      .......  .+..+..        ...+...+..+.+|+.+||+.+|.+||++ .++.+.|+
T Consensus       235 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~el~~~l~  287 (288)
T cd05050         235 GMAHEEVIYYVRDGNV--------LSCPDNCPLELYNLMRLCWSKLPSDRPSF-ASINRILQ  287 (288)
T ss_pred             CCCHHHHHHHHhcCCC--------CCCCCCCCHHHHHHHHHHcccCcccCCCH-HHHHHHhh
Confidence            4433221  1111111        11233345789999999999999999999 67777775

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=8.8e-35  Score=312.93  Aligned_cols=247  Identities=27%  Similarity=0.357  Sum_probs=194.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      ++|.+.+.||+|+||.||+|...  +..||+|.+..........+.+|+.+++.++||||+++++++  .+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            47888889999999999999875  578999998766544455688999999999999999999987  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++..   ...+++..++.++.|++.||.|||+   +|++|+||||+||+++.++.+||+|||++........ 
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~-  161 (267)
T cd06645          89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA-  161 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc-
Confidence            99999998843   3468999999999999999999999   8999999999999999999999999999876542211 


Q ss_pred             CCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                             ......|++.|+|||++.   .+.++.++|||||||++|+|++|.+||.............. .....+.. .
T Consensus       162 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~-~  232 (267)
T cd06645         162 -------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK-SNFQPPKL-K  232 (267)
T ss_pred             -------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc-cCCCCCcc-c
Confidence                   112345899999999985   45688999999999999999999999854432221111100 01101100 0


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .....+..+.+++.+||..+|.+||++ ++|
T Consensus       233 ~~~~~~~~~~~li~~~l~~~P~~R~~~-~~l  262 (267)
T cd06645         233 DKMKWSNSFHHFVKMALTKNPKKRPTA-EKL  262 (267)
T ss_pred             ccCCCCHHHHHHHHHHccCCchhCcCH-HHH
Confidence            111234678999999999999999999 444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.5e-34  Score=310.01  Aligned_cols=248  Identities=27%  Similarity=0.436  Sum_probs=190.3

Q ss_pred             eeeecCceEEEEEEEC-----CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeeccc---CCceEEEEEecCC
Q 002719          535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPN  605 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~---~~~~~LV~Ey~~g  605 (888)
                      .||+|+||.||+|.+.     ...||||.+.... ......+.+|+.+++.++||||++++++|   ....++||||+.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            5899999999999863     2569999886432 22345788999999999999999999976   2357899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.+++...  ...+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..........
T Consensus        82 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          82 GDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            9999998533  2346778889999999999999999   8999999999999999999999999999876543221110


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                      .    ......++..|+|||.+.+..++.++|||||||++|+|++ |.+||.............      .......+..
T Consensus       157 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  226 (262)
T cd05058         157 H----NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL------QGRRLLQPEY  226 (262)
T ss_pred             c----ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh------cCCCCCCCCc
Confidence            0    0112346778999999988899999999999999999999 567776544332211111      1111112233


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .+..+.+++.+||..+|.+||++ .+++..|+.+
T Consensus       227 ~~~~~~~li~~cl~~~p~~Rp~~-~~il~~l~~~  259 (262)
T cd05058         227 CPDPLYEVMLSCWHPKPEMRPTF-SELVSRIEQI  259 (262)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHH
Confidence            45789999999999999999999 7777777765

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.1e-34  Score=313.49  Aligned_cols=247  Identities=28%  Similarity=0.374  Sum_probs=188.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhc---CCCCeeeeecccC-------C
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACP-------E  594 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l---~HpnIv~l~g~~~-------~  594 (888)
                      +|.+.+.||+|+||.||+|...  ++.||+|.+......  ....+.+|+.+++.+   +||||+++++++.       .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4788899999999999999876  578999998764322  233567788887766   6999999999873       2


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcc
Confidence            4789999997 48888875432 3458999999999999999999999   89999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc---
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK---  751 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~---  751 (888)
                      ........         .....||+.|+|||++.+..++.++|||||||++|+|++|++||................   
T Consensus       156 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~  226 (288)
T cd07863         156 RIYSCQMA---------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP  226 (288)
T ss_pred             ccccCccc---------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCC
Confidence            76543211         122358999999999998899999999999999999999999997654332211110000   


Q ss_pred             ------c-------ccCCCC----CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          752 ------N-------LLDPLA----GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       752 ------~-------~ld~~~----~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                            .       .+.+..    .......+..+.+|+.+||+.||.+||++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~  281 (288)
T cd07863         227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFR  281 (288)
T ss_pred             ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHH
Confidence                  0       000000    0011123467899999999999999999843

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.6e-34  Score=326.29  Aligned_cols=247  Identities=20%  Similarity=0.265  Sum_probs=190.8

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--------
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------  593 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------  593 (888)
                      ..++|.+.+.||+|+||.||++...  +..||||++....  ......+.+|+.+++.++||||+++++++.        
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3568999999999999999999875  5789999987542  223456889999999999999999998762        


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...|+||||+++ +|.+.+.     ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence            246899999965 6777663     247888999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---  750 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---  750 (888)
                      ++.......         .....||..|+|||++.+..++.++|||||||+||+|++|+.||...+...........   
T Consensus       173 a~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  243 (364)
T cd07875         173 ARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  243 (364)
T ss_pred             ccccCCCCc---------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            976533211         12345899999999999999999999999999999999999999765432211110000   


Q ss_pred             --------------------------------ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          751 --------------------------------KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       751 --------------------------------~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                                      .....+.....+......+.+|+.+||..||.+||++ +++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~-~e~  315 (364)
T cd07875         244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-DEA  315 (364)
T ss_pred             CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH-HHH
Confidence                                            0000000011111224578999999999999999999 444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.4e-34  Score=311.73  Aligned_cols=254  Identities=26%  Similarity=0.431  Sum_probs=199.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      .+|.+.+.||+|+||.||+|.+.     ...+|+|.+...... ....+.+|+.+++.++||||+++++++  .+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            46888899999999999999864     236999998754322 235789999999999999999999987  4578899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++++|.+++...  ...+++..++.++.|++.||.|||+   ++++||||||+|||++.++.++|+|||++..+..
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            9999999999999533  2468999999999999999999999   8999999999999999999999999999987653


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ......     ......++..|+|||.+.+..++.++|||||||++|++++ |..||................      .
T Consensus       159 ~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------~  227 (267)
T cd05066         159 DPEAAY-----TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------R  227 (267)
T ss_pred             ccceee-----ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC------c
Confidence            321110     0112234678999999998899999999999999999886 999996543322111111000      1


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ...+...+..+.+++.+||+.+|.+||++ .++++.|+.+
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~  266 (267)
T cd05066         228 LPAPMDCPAALHQLMLDCWQKDRNERPKF-EQIVSILDKL  266 (267)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCchhCCCH-HHHHHHHHhh
Confidence            11223345789999999999999999999 7777777653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=321.71  Aligned_cols=249  Identities=24%  Similarity=0.295  Sum_probs=189.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||++...  ++.||+|++....   ......+.+|+.++..++||||++++++|  .+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            36889999999999999999876  5789999987522   12234588999999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++...  ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..+...
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            999999999998532  3458899999999999999999999   89999999999999999999999999998765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ....       .....||+.|+|||++..     +.++.++|||||||++|+|++|+.||..................+.
T Consensus       156 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~  228 (331)
T cd05597         156 GTVQ-------SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ  228 (331)
T ss_pred             CCcc-------ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence            2111       112358999999999963     4578899999999999999999999976543322111111111111


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCC--CCCChHHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRK--SRPELGKDV  791 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~--~RPs~~~~v  791 (888)
                       .... ....+..+.+|+.+|+..++.  .||++ +++
T Consensus       229 -~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~-~~~  263 (331)
T cd05597         229 -FPPD-VTDVSEEAKDLIRRLICSPETRLGRNGL-QDF  263 (331)
T ss_pred             -CCCc-cCCCCHHHHHHHHHHccCcccccCCCCH-HHH
Confidence             1111 112457789999998865333  36777 444

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=4e-34  Score=307.49  Aligned_cols=248  Identities=25%  Similarity=0.447  Sum_probs=195.4

Q ss_pred             CCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC------hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG------PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~------~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      +|...+.||.|+||.||+|... +..+|+|.+.......      ...+.+|+.+|+.++|+||++++++|.  +..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4677889999999999999874 5779999887543211      245889999999999999999999984  468899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++++|.+++...   .++++..+..++.|++.||.|||+   .+|+|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            9999999999998432   458899999999999999999999   8999999999999999999999999999886532


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ........  .......|+..|+|||++.+..++.++|||||||++|+|++|.+||....................    
T Consensus       155 ~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----  228 (265)
T cd06631         155 VGLHGTHS--NMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP----  228 (265)
T ss_pred             cccccccc--ccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC----
Confidence            21111100  011234589999999999988899999999999999999999999976544332222211111111    


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      ..+...+..+.+++.+||..+|.+||++.
T Consensus       229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  257 (265)
T cd06631         229 RLPDSFSAAAIDFVTSCLTRDQHERPSAL  257 (265)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCcccCCCHH
Confidence            12334557899999999999999999994

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.7e-34  Score=317.69  Aligned_cols=256  Identities=23%  Similarity=0.396  Sum_probs=199.9

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC--C
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP--E  594 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~  594 (888)
                      ..++|.+.+.||+|+||.||+|...       +..||+|.+...... ....+.+|+.+++++ +||||++++++|.  +
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            3457899999999999999999752       246999998754322 235688999999999 7999999999883  5


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..++||||+++|+|.+++.... ...+++..+..++.+++.||.|||+   ++|+|+||||+|||++.++.+||+|||++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence            6899999999999999985432 2348999999999999999999999   89999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      ..+......      .......++..|+|||.+.+..++.++|||||||++|+|++ |.+||............  ... 
T Consensus       189 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~--~~~-  259 (302)
T cd05055         189 RDIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL--IKE-  259 (302)
T ss_pred             ccccCCCce------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH--HHc-
Confidence            865432211      01122346788999999999999999999999999999998 99998654322211110  000 


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                        ......+...+..+.+|+.+||..+|.+||++ .++++.|+.
T Consensus       260 --~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ell~~l~~  300 (302)
T cd05055         260 --GYRMAQPEHAPAEIYDIMKTCWDADPLKRPTF-KQIVQLIGK  300 (302)
T ss_pred             --CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHh
Confidence              00111222345789999999999999999999 777777765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.8e-34  Score=316.02  Aligned_cols=259  Identities=27%  Similarity=0.446  Sum_probs=196.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC------------------CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeee
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTL  588 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~------------------~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l  588 (888)
                      ++|++.++||+|+||.||++.+.                  ...||+|++..... .....+.+|+.+|+.++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            46889999999999999998543                  23589999875432 224578999999999999999999


Q ss_pred             eccc--CCceEEEEEecCCCChhhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcE
Q 002719          589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDN--------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI  658 (888)
Q Consensus       589 ~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NI  658 (888)
                      ++++  .+..++||||+++|+|.+++.....        ...+++..++.++.|++.||.|||+   +|++||||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence            9987  4578999999999999999864321        1347788999999999999999999   8999999999999


Q ss_pred             EEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 002719          659 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALG  736 (888)
Q Consensus       659 Ll~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt--G~~Pf~  736 (888)
                      |++.++.++|+|||++..+.......      ......+++.|++||...++.++.++|||||||++|||++  |..||.
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~  235 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYR------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS  235 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCccee------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence            99999999999999987654322110      0112235678999999988899999999999999999998  778886


Q ss_pred             CchHHHHHHhhcccc-cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          737 ITKEVQYALDTGKLK-NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       737 ~~~~~~~~~~~~~~~-~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ...........+... ..........+...+..+.+|+.+||+.||.+||++ .+|.+.|+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~  295 (296)
T cd05095         236 QLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF-QEIHATLL  295 (296)
T ss_pred             ccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence            543322211111100 000000011122345789999999999999999999 67766664

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-35  Score=317.37  Aligned_cols=242  Identities=23%  Similarity=0.360  Sum_probs=202.8

Q ss_pred             cCCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~--~~~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      .+-|++.+.||+|.|..|-++.  ++|..||||++.+.....  ..++.+|+..|+.++|||||+||.+.+  ..+|||+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            3458888999999999998884  568999999998865543  457899999999999999999999974  5799999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc-CCCceeeecccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~  679 (888)
                      |+-++|+|.++|-+.+  ..+++....+++.||+.|+.|+|+   ..+|||||||+|+.+- .-|.+||.|||++..+..
T Consensus        97 ELGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            9999999999996554  458999999999999999999999   6699999999998774 668999999999987655


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ...         .+...|+..|-|||++.+..|+ ++.||||||||||-|++|++||...+..+..      ..++|- .
T Consensus       172 G~k---------L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL------TmImDC-K  235 (864)
T KOG4717|consen  172 GKK---------LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL------TMIMDC-K  235 (864)
T ss_pred             cch---------hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh------hhhhcc-c
Confidence            431         1334599999999999999997 6789999999999999999999765544332      222222 2


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...|...+.+..+||..||..||++|.++.+
T Consensus       236 YtvPshvS~eCrdLI~sMLvRdPkkRAslEe  266 (864)
T KOG4717|consen  236 YTVPSHVSKECRDLIQSMLVRDPKKRASLEE  266 (864)
T ss_pred             ccCchhhhHHHHHHHHHHHhcCchhhccHHH
Confidence            2457788899999999999999999999843

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.2e-34  Score=314.57  Aligned_cols=246  Identities=24%  Similarity=0.361  Sum_probs=194.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +.|.+.++||.|+||.||+|...  +..|++|.+..........+.+|+.+++.++||||+++++++  ....++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56889999999999999999875  578999998765544456788999999999999999999987  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|..++...  ...+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++.........
T Consensus        92 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          92 PGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             CCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            999998887432  3458999999999999999999999   89999999999999999999999999988654322111


Q ss_pred             CCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                              .....+++.|+|||++.     ...++.++|||||||++|+|++|.+||...............   ..+. 
T Consensus       167 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~-  234 (292)
T cd06644         167 --------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPT-  234 (292)
T ss_pred             --------cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCcc-
Confidence                    12334789999999985     345788999999999999999999999765433222211111   1110 


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...+...+..+.+|+.+||..+|.+||++ +++
T Consensus       235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i  266 (292)
T cd06644         235 LSQPSKWSMEFRDFLKTALDKHPETRPSA-AQL  266 (292)
T ss_pred             CCCCcccCHHHHHHHHHHhcCCcccCcCH-HHH
Confidence            01122345679999999999999999999 444

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=4e-35  Score=330.85  Aligned_cols=250  Identities=23%  Similarity=0.309  Sum_probs=192.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|+..+.||+|+||.||++...  +..||||++....   ......+..|+.++..++||||+++++.+.  +..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            36888999999999999999875  5789999987532   223456888999999999999999999884  4689999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++..   ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++..+...
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            99999999999843   3468999999999999999999999   89999999999999999999999999998755321


Q ss_pred             cccCCC---------------------------ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Q 002719          681 EISSNN---------------------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP  733 (888)
Q Consensus       681 ~~~~~~---------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~  733 (888)
                      ......                           ..........||+.|+|||++.+..++.++|||||||++|+|+||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~  234 (360)
T cd05627         155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (360)
T ss_pred             cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence            100000                           00000123469999999999999999999999999999999999999


Q ss_pred             CCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          734 ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       734 Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ||..................+. ...  ....+..+.+|+.+|+. +|.+|++.
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~-~p~--~~~~s~~~~~li~~l~~-~p~~R~~~  284 (360)
T cd05627         235 PFCSETPQETYRKVMNWKETLV-FPP--EVPISEKAKDLILRFCT-DSENRIGS  284 (360)
T ss_pred             CCCCCCHHHHHHHHHcCCCcee-cCC--CCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence            9976554332221111111110 000  11235678899998774 99999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.3e-34  Score=324.65  Aligned_cols=254  Identities=25%  Similarity=0.382  Sum_probs=197.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC---Cc
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---EV  595 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~---~~  595 (888)
                      ++|.+.+.||+|+||.||+|.+.       ++.||||++...... ....+.+|+.+|.++ +||||++++++|.   ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            47899999999999999999742       467999999754322 234688999999999 6899999999873   35


Q ss_pred             eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDN----------------------------------------------------------  617 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~----------------------------------------------------------  617 (888)
                      .++||||+++|+|.+++.....                                                          
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            7899999999999998854210                                                          


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccc
Q 002719          618 ------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC  691 (888)
Q Consensus       618 ------~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~  691 (888)
                            ...+++..+..++.|++.||.|||+   ++|+||||||.|||++.++.+||+|||++..+.......      .
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------~  237 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------R  237 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchh------h
Confidence                  1247888899999999999999999   899999999999999999999999999987653321110      0


Q ss_pred             cCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHhhcccccccCCCCCCCChhhHH
Q 002719          692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV---QYALDTGKLKNLLDPLAGDWPFVQAE  767 (888)
Q Consensus       692 ~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~---~~~~~~~~~~~~ld~~~~~~p~~~~~  767 (888)
                      .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||......   ......+.        ....|...+.
T Consensus       238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  309 (343)
T cd05103         238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--------RMRAPDYTTP  309 (343)
T ss_pred             cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC--------CCCCCCCCCH
Confidence            112335678999999998899999999999999999997 99998653321   11111111        1111223346


Q ss_pred             HHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          768 QLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       768 ~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      .+.+++..||+.+|.+||++ .+|++.|+.+.
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~-~eil~~l~~~~  340 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTF-SELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHHHccCChhhCcCH-HHHHHHHHHHH
Confidence            79999999999999999999 77777777653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.9e-34  Score=306.17  Aligned_cols=245  Identities=27%  Similarity=0.395  Sum_probs=198.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      ++|...+.||.|+||.||+|...  +..|++|.+.....  ...+.+|+++++.++||||+++++++  ....++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            57889999999999999999886  47899999875432  56899999999999999999999988  45788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++...  ...+++..++.++.|++.||.|||+   .+++||||+|.||+++.++.+||+|||++.........
T Consensus        81 ~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          81 GAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            999999998532  3568999999999999999999999   89999999999999999999999999998866433211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              .....|+..|+|||++.+..++.++|||||||++|+|++|++||...............   . ......+.
T Consensus       156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~-~~~~~~~~  223 (256)
T cd06612         156 --------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---P-PPTLSDPE  223 (256)
T ss_pred             --------cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---C-CCCCCchh
Confidence                    12234788999999999889999999999999999999999999765443322211110   0 00111223


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ..+..+.+++.+||+.+|.+||++ ++++
T Consensus       224 ~~~~~~~~~i~~~l~~~P~~Rps~-~~il  251 (256)
T cd06612         224 KWSPEFNDFVKKCLVKDPEERPSA-IQLL  251 (256)
T ss_pred             hcCHHHHHHHHHHHhcChhhCcCH-HHHh
Confidence            345689999999999999999999 4443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=2e-34  Score=307.97  Aligned_cols=245  Identities=26%  Similarity=0.399  Sum_probs=197.6

Q ss_pred             CCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEEEEecCCC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLVYEYLPNG  606 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV~Ey~~gg  606 (888)
                      .+|.+.+.||+|+||.||+|...+..||+|.+....  ....+.+|+.+++.++||||+++++++ .+..++||||++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~   83 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG   83 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence            357888999999999999999989999999986532  345789999999999999999999987 45678999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++.... ...+++..++.++.|++.||.|||+   +|++||||||+||+++.++.+||+|||++.......     
T Consensus        84 ~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----  154 (254)
T cd05083          84 NLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-----  154 (254)
T ss_pred             CHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence            9999986432 3458899999999999999999999   899999999999999999999999999987543211     


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                            .....+..|+|||++.++.++.++|+|||||++|+|++ |++||...............      .....+...
T Consensus       155 ------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~  222 (254)
T cd05083         155 ------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG------YRMEPPEGC  222 (254)
T ss_pred             ------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC------CCCCCCCcC
Confidence                  11224678999999998899999999999999999997 99999755432221111110      011122334


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      +..+.+++.+||+.+|.+||++ +++...|+
T Consensus       223 ~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~  252 (254)
T cd05083         223 PADVYVLMTSCWETEPKKRPSF-HKLREKLE  252 (254)
T ss_pred             CHHHHHHHHHHcCCChhhCcCH-HHHHHHHc
Confidence            5789999999999999999999 66666554

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.9e-34  Score=308.11  Aligned_cols=244  Identities=23%  Similarity=0.337  Sum_probs=196.2

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|.+.+.||.|+||.||++...  +..||+|.+.... ....+.+.+|+.+++.++||||+++++++  .+..++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4778899999999999999875  5789999986432 23346788999999999999999999988  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++... ....+++..++.++.|++.||.|||+   +||+|+||||+||+++.++.++|+|||++.........
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence            999999988532 23458899999999999999999999   89999999999999999999999999998765432211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              .....|++.|+|||++.+..++.++|+||||+++|+|++|.+||.............  .....+    .+.
T Consensus       157 --------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~----~~~  222 (255)
T cd08219         157 --------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKP----LPS  222 (255)
T ss_pred             --------cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCC----CCc
Confidence                    123458899999999998889999999999999999999999997655433221111  111111    223


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      ..+..+.+|+.+||+.||.+||++.+.
T Consensus       223 ~~~~~~~~li~~~l~~~P~~Rp~~~~i  249 (255)
T cd08219         223 HYSYELRSLIKQMFKRNPRSRPSATTI  249 (255)
T ss_pred             ccCHHHHHHHHHHHhCCcccCCCHHHH
Confidence            345679999999999999999999433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-34  Score=306.96  Aligned_cols=248  Identities=28%  Similarity=0.372  Sum_probs=199.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      ++|.+.+.||.|+||.||+|...  +..+++|++..........+.+|+.+++.++||||+++++++  ....+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            57888999999999999999875  578999999876555567899999999999999999999987  45788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++...  ...+++..+..++.|++.||.|||+   ++|+|+||+|+||+++.++.+||+|||++..+......
T Consensus        83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          83 GGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence            999999988532  2568999999999999999999999   89999999999999999999999999998765432111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                              .....++..|+|||.+.+.   .++.++|||||||++|+|+||.+||..............  ..+.+....
T Consensus       158 --------~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~  227 (262)
T cd06613         158 --------RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK--SNFPPPKLK  227 (262)
T ss_pred             --------cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCCCcccc
Confidence                    1223578899999999776   789999999999999999999999976543332221111  101111111


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .+...+..+.+++.+||..+|.+||++ +++
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~i  257 (262)
T cd06613         228 DKEKWSPVFHDFIKKCLTKDPKKRPTA-TKL  257 (262)
T ss_pred             chhhhhHHHHHHHHHHcCCChhhCCCH-HHH
Confidence            233446789999999999999999999 444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.4e-34  Score=325.54  Aligned_cols=248  Identities=20%  Similarity=0.259  Sum_probs=190.7

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC--------
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--------  593 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------  593 (888)
                      ..++|...+.||+|+||.||++...  +..||||.+......  ....+.+|+.+++.++||||+++++++.        
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            3468999999999999999999865  678999998754322  2356788999999999999999999872        


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...++||||+++ +|.+.+.     ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence            246899999965 6666662     247888999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc-----
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-----  748 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~-----  748 (888)
                      ++.......         .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............     
T Consensus       166 ~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (355)
T cd07874         166 ARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_pred             cccCCCccc---------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            976433211         123458999999999999899999999999999999999999997654322111000     


Q ss_pred             -----------ccccc-------------------cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          749 -----------KLKNL-------------------LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       749 -----------~~~~~-------------------ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                                 .....                   .-+.....+...+..+.+|+.+||..||.+||++ .+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~-~ell  309 (355)
T cd07874         237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-DEAL  309 (355)
T ss_pred             CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH-HHHh
Confidence                       00000                   0000011122234678999999999999999999 4443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.8e-34  Score=304.71  Aligned_cols=242  Identities=28%  Similarity=0.437  Sum_probs=191.4

Q ss_pred             eeeecCceEEEEEEEC-CeEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCChhh
Q 002719          535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED  610 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~  610 (888)
                      +||+|+||.||+|... +..||+|.+....... ...+.+|+.+++.++||||++++++|.  ...++||||+++++|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            5899999999999865 4779999987543221 346889999999999999999999884  46889999999999999


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC  690 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~  690 (888)
                      ++...  ...+++..++.++.+++.||.|||.   +|++||||||+||+++.++.+||+|||++..........      
T Consensus        82 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------  150 (250)
T cd05085          82 FLRKK--KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS------  150 (250)
T ss_pred             HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccccc------
Confidence            88533  3458899999999999999999999   899999999999999999999999999987543322111      


Q ss_pred             ccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 002719          691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL  769 (888)
Q Consensus       691 ~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l  769 (888)
                       .....+++.|+|||++.++.++.++||||||+++|+|++ |..||...............      .....+...+..+
T Consensus       151 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  223 (250)
T cd05085         151 -SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG------YRMSCPQKCPDDV  223 (250)
T ss_pred             -CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCCHHH
Confidence             011234678999999998899999999999999999998 99999755433222111111      1112233455789


Q ss_pred             HHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          770 ANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       770 ~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .+++.+||..+|.+||++ .++.+.|
T Consensus       224 ~~li~~~l~~~p~~Rp~~-~~l~~~l  248 (250)
T cd05085         224 YKVMQRCWDYKPENRPKF-SELQKEL  248 (250)
T ss_pred             HHHHHHHcccCcccCCCH-HHHHHHh
Confidence            999999999999999999 6666655

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.8e-34  Score=349.51  Aligned_cols=253  Identities=22%  Similarity=0.353  Sum_probs=196.2

Q ss_pred             hhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc----CCc
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC----PEV  595 (888)
Q Consensus       524 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~----~~~  595 (888)
                      ....++|.+..+||.|+||+||++.+.  +..||+|++......  ....|..|+.+|..|+|||||+++++|    ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            344568999999999999999999886  467999998754322  245688999999999999999999987    235


Q ss_pred             eEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----CceeeccccCCcEEEcC--------
Q 002719          596 WTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKP----HSIVHGDLKPANILLDA--------  662 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~----~giiHrDLKp~NILl~~--------  662 (888)
                      +||||||+++|+|.++|... .....+++..++.|+.||+.||.|||...+    ++||||||||+||||+.        
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            88999999999999998643 223569999999999999999999998431    45999999999999964        


Q ss_pred             ---------CCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhC
Q 002719          663 ---------NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTG  731 (888)
Q Consensus       663 ---------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG  731 (888)
                               .+.+||+|||++..+.....         .....||+.|+|||++.+  ..++.++||||||||||+|+||
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG  239 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESM---------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG  239 (1021)
T ss_pred             cccccccCCCCceEEccCCcccccccccc---------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence                     34589999999986543211         123358999999999864  4588999999999999999999


Q ss_pred             CCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          732 RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       732 ~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .+||.........+......  ....    ....+..+.+||..||..+|.+||++.+.+
T Consensus       240 k~PF~~~~~~~qli~~lk~~--p~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL  293 (1021)
T PTZ00266        240 KTPFHKANNFSQLISELKRG--PDLP----IKGKSKELNILIKNLLNLSAKERPSALQCL  293 (1021)
T ss_pred             CCCCCcCCcHHHHHHHHhcC--CCCC----cCCCCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence            99997554433322221111  0100    112347799999999999999999995543

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=3.6e-34  Score=308.94  Aligned_cols=248  Identities=23%  Similarity=0.364  Sum_probs=186.9

Q ss_pred             eeeecCceEEEEEEECC----eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||+|.+.+    ..+|+|.+...... ....+.+|+.+++.++||||+++++++.  ...++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999997643    46999988765422 2346889999999999999999999884  46789999999999


Q ss_pred             hhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          608 LEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       608 L~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |.+++....  ....+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.+||+|||++.......... 
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~-  157 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV-  157 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee-
Confidence            999986432  22356777888999999999999999   899999999999999999999999999987543222111 


Q ss_pred             CccccccCCCCCCcccCChhhhccC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHh--hcccccccC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASG-------ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD--TGKLKNLLD  755 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~--~~~~~~~ld  755 (888)
                           ......|+..|+|||++.+.       .++.++|||||||++|+|++ |.+||...........  .+.......
T Consensus       158 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd05087         158 -----TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK  232 (269)
T ss_pred             -----cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC
Confidence                 11233478899999998642       35789999999999999996 9999975443322111  111111111


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                         +......+..+.+++..|| .+|.+||++ ++|+..|.
T Consensus       233 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~-~~l~~~l~  268 (269)
T cd05087         233 ---PRLKLPLSDRWYEVMQFCW-LQPEQRPSA-EEVHLLLS  268 (269)
T ss_pred             ---CccCCCCChHHHHHHHHHh-cCcccCCCH-HHHHHHhc
Confidence               1122234567899999999 689999999 67766553

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.9e-34  Score=318.86  Aligned_cols=257  Identities=24%  Similarity=0.397  Sum_probs=200.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeecccC--C
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E  594 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~---------~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~  594 (888)
                      .+|.+.+.||+|+||.||++...         ...||+|.+..... .....+.+|+.+++.+ +||||++++++|.  .
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            47888999999999999999752         24699999875432 2235688999999999 6999999999884  4


Q ss_pred             ceEEEEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD  661 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~  661 (888)
                      ..++||||+++|+|.+++....             ....+++..+..++.|++.||.|||+   +|++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence            6889999999999999996432             12458899999999999999999999   8999999999999999


Q ss_pred             CCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH
Q 002719          662 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE  740 (888)
Q Consensus       662 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~  740 (888)
                      .++.+||+|||+++..........      .....++..|+|||++.++.++.++|||||||++|+|++ |..||.....
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKK------TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             CCCcEEEccccccccccccccccc------cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999986543221110      011234568999999998899999999999999999999 8999965543


Q ss_pred             HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          741 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       741 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      ........      .......+...+..+.+|+.+||..+|.+||++ .+++..|+.+..
T Consensus       243 ~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~~ll~~l~~~~~  295 (314)
T cd05099         243 EELFKLLR------EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTF-KQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHHH------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHHH
Confidence            22111110      011112233445789999999999999999999 788888887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2e-34  Score=321.51  Aligned_cols=249  Identities=24%  Similarity=0.278  Sum_probs=189.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.++||+|+||.||++...  +..||+|++....   ......+..|+.++..++||||+++++++  .+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            36888999999999999999886  4679999986421   12234578899999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...  ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++..+...
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            999999999999532  3458999999999999999999999   89999999999999999999999999998754332


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ...       ......||+.|+|||++.     ...++.++|||||||+||+|++|+.||................... 
T Consensus       156 ~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-  227 (332)
T cd05623         156 GTV-------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-  227 (332)
T ss_pred             Ccc-------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc-
Confidence            211       112345999999999986     3468899999999999999999999997655433221111000000 


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCC--CCChHHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKS--RPELGKDV  791 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~--RPs~~~~v  791 (888)
                      + ........+..+.+|+.+|+..++..  ||++ +++
T Consensus       228 ~-~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~-~~~  263 (332)
T cd05623         228 Q-FPAQVTDVSEDAKDLIRRLICSREHRLGQNGI-EDF  263 (332)
T ss_pred             c-CCCccccCCHHHHHHHHHHccChhhhcCCCCH-HHH
Confidence            0 01111234578999999988654443  5777 444

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=9.2e-35  Score=329.35  Aligned_cols=251  Identities=24%  Similarity=0.289  Sum_probs=192.7

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC--Cc
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EV  595 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~  595 (888)
                      +....++|.+.+.||+|+||.||++...  +..||+|++....   ......+.+|+.+++.++||||+++++++.  ..
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            3344568999999999999999999886  5789999986432   122345788999999999999999999884  46


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .++||||++||+|.+++..    ..+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            8899999999999998842    347888999999999999999999   899999999999999999999999999998


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      .........       .....||+.|+|||++...    .++.++|||||||+||+|++|.+||................
T Consensus       191 ~~~~~~~~~-------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~  263 (371)
T cd05622         191 KMNKEGMVR-------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK  263 (371)
T ss_pred             EcCcCCccc-------ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence            654322111       1234599999999999754    37889999999999999999999998665432221111111


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCC---CCChHHHHH
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS---RPELGKDVW  792 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~---RPs~~~~v~  792 (888)
                      ..+.   ...+...+..+.+|+..||. +|..   ||++ ++++
T Consensus       264 ~~~~---~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~-~ei~  302 (371)
T cd05622         264 NSLT---FPDDNDISKEAKNLICAFLT-DREVRLGRNGV-EEIK  302 (371)
T ss_pred             Cccc---CCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCH-HHHh
Confidence            1010   01112345789999999998 4444   6676 4443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.4e-34  Score=309.65  Aligned_cols=235  Identities=25%  Similarity=0.383  Sum_probs=183.1

Q ss_pred             eeeecCceEEEEEEEC--------------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          535 KIGEGGYGSIYKGLLR--------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--------------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      .||+|+||.||+|+..              ...|++|.+..........+.+|+.++..++||||+++++++.  ...++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            5899999999999753              1358999887654444557889999999999999999999883  46789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc-------eeeecc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-------SKLSDF  671 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~-------vKL~DF  671 (888)
                      ||||+++|+|..++...  ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.       +|++||
T Consensus        82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          82 VEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             EEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            99999999999887432  3458999999999999999999999   89999999999999986654       899999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhc-cCCCCchhhHHHHHHHHHHHH-hCCCCCCCchHHHHHHhhcc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLL-TGRPALGITKEVQYALDTGK  749 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~~~~~~~~  749 (888)
                      |++......            ....++..|+|||++. +..++.++|||||||++|+|+ +|..||..............
T Consensus       157 g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  224 (262)
T cd05077         157 GIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEG  224 (262)
T ss_pred             CCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhc
Confidence            988654321            1224788999999987 457899999999999999997 58888865432221110000


Q ss_pred             cccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       750 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..    .    .....+..+.+|+.+||+.||.+||++ .++++.+
T Consensus       225 ~~----~----~~~~~~~~~~~li~~cl~~dp~~Rp~~-~~il~~~  261 (262)
T cd05077         225 QC----M----LVTPSCKELADLMTHCMNYDPNQRPFF-RAIMRDI  261 (262)
T ss_pred             Cc----c----CCCCChHHHHHHHHHHcCCChhhCcCH-HHHHHhc
Confidence            00    0    111224678999999999999999999 6665544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-34  Score=323.83  Aligned_cols=245  Identities=29%  Similarity=0.450  Sum_probs=205.5

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcC-CCCeeeeecccC--CceE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIR-HPNLVTLVGACP--EVWT  597 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~  597 (888)
                      ....|.+.+.||+|.||.||++..+  ++.+|+|++.+.....   ...+.+|+.+|+++. |||||.++++|.  +..+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            3457899999999999999999876  5789999998765543   358999999999998 999999999994  4689


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC----CCceeeecccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDFGI  673 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~----~~~vKL~DFGl  673 (888)
                      +|||+|.||.|.+.+...    .+++..+..++.|++.++.|||+   .||+||||||+|+|+..    ++.+|++|||+
T Consensus       113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999999999999655    29999999999999999999999   89999999999999953    35899999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLK  751 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--~~~~~~  751 (888)
                      +.......         .....+||+.|+|||++....|+..+||||+||++|.|++|.+||..........  ..+.+ 
T Consensus       186 a~~~~~~~---------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-  255 (382)
T KOG0032|consen  186 AKFIKPGE---------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-  255 (382)
T ss_pred             ceEccCCc---------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC-
Confidence            99876521         1234569999999999999999999999999999999999999998776544333  22222 


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                         +.....|+. .+..+.+++..|+..||..|+++ ..++
T Consensus       256 ---~f~~~~w~~-is~~akd~i~~ll~~dp~~R~ta-~~~L  291 (382)
T KOG0032|consen  256 ---DFTSEPWDD-ISESAKDFIRKLLEFDPRKRLTA-AQAL  291 (382)
T ss_pred             ---CCCCCCccc-cCHHHHHHHHHhcccCcccCCCH-HHHh
Confidence               233444554 47889999999999999999999 4443

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.3e-34  Score=315.72  Aligned_cols=244  Identities=25%  Similarity=0.381  Sum_probs=197.5

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ..+|.+.+.||.|+||.||+|...  +..||+|.+........+.+.+|+.+++.++||||++++++|  .+..++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            357889999999999999999864  688999999766555566789999999999999999999988  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++.    ...+++..+..++.+++.||.|||+   .|++||||||+|||++.++.++|+|||++........
T Consensus        98 ~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          98 LAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             cCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            99999999884    2357889999999999999999999   8999999999999999999999999999876533221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||.+.+..++.++|||||||++|+|++|.+||...............    .......+
T Consensus       171 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~----~~~~~~~~  238 (297)
T cd06656         171 K--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPELQNP  238 (297)
T ss_pred             C--------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC----CCCCCCCc
Confidence            1        12234889999999999888999999999999999999999999755432221111100    00011123


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...+..+.+|+.+||..+|.+||++.+
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~  265 (297)
T cd06656         239 ERLSAVFRDFLNRCLEMDVDRRGSAKE  265 (297)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHH
Confidence            344567899999999999999999943

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.7e-34  Score=316.79  Aligned_cols=249  Identities=23%  Similarity=0.346  Sum_probs=190.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      .+|...++||+|+||.||+|...  +..||+|.+...... ....+.+|+.+++.++||||+++++++  .+..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            46889999999999999999875  577999998754322 234678999999999999999999988  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++ +|.+++...  ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++........
T Consensus        86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            975 788877432  3458889999999999999999999   8999999999999999999999999999875433211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---------cc
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---------KN  752 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---------~~  752 (888)
                      .        .....+|+.|+|||++.+ ..++.++|||||||++|+|+||++||...............         ..
T Consensus       160 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (309)
T cd07872         160 T--------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG  231 (309)
T ss_pred             c--------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence            1        122357899999999865 46889999999999999999999999755432211110000         00


Q ss_pred             c--------c-CCCC-C----CCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 L--------L-DPLA-G----DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~--------l-d~~~-~----~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      +        . .+.. .    ......+..+.+|+.+||..||.+||++ .++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-~e~  283 (309)
T cd07872         232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA-EEA  283 (309)
T ss_pred             hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH-HHH
Confidence            0        0 0000 0    0011234678999999999999999998 444

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-34  Score=306.36  Aligned_cols=252  Identities=30%  Similarity=0.516  Sum_probs=201.8

Q ss_pred             cCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      .++|.+.+.||.|+||.||+|.+.+ ..||||.+.... .....+.+|+.+++.++||||+++++++.  ...++||||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            4578999999999999999998764 679999987543 34567999999999999999999999884  4789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++.... ...+++..+..++.+++.||.|||+   ++++|+||||+||+++.++.+||+|||++..+......
T Consensus        84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            9999999995432 2468999999999999999999999   89999999999999999999999999998766432111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                             ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..............  .    .....+
T Consensus       160 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~--~----~~~~~~  226 (261)
T cd05034         160 -------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER--G----YRMPRP  226 (261)
T ss_pred             -------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--C----CCCCCC
Confidence                   1112235678999999998899999999999999999998 9999965443221111111  0    011112


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ...+..+.+++.+||..+|.+||++ +++...|+.
T Consensus       227 ~~~~~~~~~~i~~~l~~~p~~Rp~~-~~l~~~l~~  260 (261)
T cd05034         227 PNCPEELYDLMLQCWDKDPEERPTF-EYLQSFLED  260 (261)
T ss_pred             CCCCHHHHHHHHHHcccCcccCCCH-HHHHHHHhc
Confidence            2335789999999999999999999 777777664

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-36  Score=299.89  Aligned_cols=245  Identities=24%  Similarity=0.401  Sum_probs=196.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      +.|++...||+|.|+.||+....  ++.+|+|+++..  ...+.+.+.+|+.|.+.|+||||++|.....  ...|||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            46788888999999999998765  677898887654  3335678999999999999999999999874  46789999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc---CCCceeeeccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFGISRFLS  678 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~---~~~~vKL~DFGla~~~~  678 (888)
                      ++.|++|..-+-.+   ..+++..+-.++.||+.+|.|+|.   ++|||||+||+|+||-   ..-.+||+|||+|..+.
T Consensus        91 ~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             cccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence            99999997666433   457888899999999999999999   9999999999999994   34578999999999876


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ....         ....+|||.|||||++...+|+..+|||+.|||||-|+.|++||.+.+.....  ++....-.+-..
T Consensus       165 ~g~~---------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly--e~I~~g~yd~~~  233 (355)
T KOG0033|consen  165 DGEA---------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY--EQIKAGAYDYPS  233 (355)
T ss_pred             Cccc---------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH--HHHhccccCCCC
Confidence            3221         13457999999999999999999999999999999999999999873332211  111222222233


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      ..|+ ..+++..+|+++||..||.+|.+..+.
T Consensus       234 ~~w~-~is~~Ak~LvrrML~~dP~kRIta~EA  264 (355)
T KOG0033|consen  234 PEWD-TVTPEAKSLIRRMLTVNPKKRITADEA  264 (355)
T ss_pred             cccC-cCCHHHHHHHHHHhccChhhhccHHHH
Confidence            3455 345779999999999999999998543

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.6e-34  Score=311.37  Aligned_cols=254  Identities=25%  Similarity=0.417  Sum_probs=197.3

Q ss_pred             CCCccceeeecCceEEEEEEECC-----eEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      +|.+.+.||+|+||.||+|.+..     ..||||.+.... ......|..|+.+++.++||||+++++++.  ...++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            47788899999999999998752     359999987542 222457899999999999999999999873  4678999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...  ...+++..++.++.|++.||.|||+   +|++|+||||+||+++.++.+||+|||++......
T Consensus        85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  159 (269)
T cd05065          85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  159 (269)
T ss_pred             ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence            999999999998543  3468999999999999999999999   89999999999999999999999999998765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      .......   .......+..|+|||++.+..++.++|||||||++|||++ |.+||................      ..
T Consensus       160 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~------~~  230 (269)
T cd05065         160 TSDPTYT---SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY------RL  230 (269)
T ss_pred             ccccccc---cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC------cC
Confidence            2111100   0011122467999999998999999999999999999886 999997554332211111110      11


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ..+...+..+.+++.+||..+|.+||++ +.+...|+.
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~  267 (269)
T cd05065         231 PPPMDCPTALHQLMLDCWQKDRNARPKF-GQIVSTLDK  267 (269)
T ss_pred             CCcccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHh
Confidence            1223345779999999999999999999 677777664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2e-34  Score=336.52  Aligned_cols=251  Identities=21%  Similarity=0.277  Sum_probs=186.9

Q ss_pred             hhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCC------CCeeeeecccC
Q 002719          522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH------PNLVTLVGACP  593 (888)
Q Consensus       522 ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H------pnIv~l~g~~~  593 (888)
                      ++...+++|.+.++||+|+||+||+|.+.  +..||||+++... .....+..|+.++..++|      +++++++++|.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            34455678999999999999999999875  5789999986432 223456778888888755      45888888773


Q ss_pred             ---CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC------
Q 002719          594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF------  664 (888)
Q Consensus       594 ---~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~------  664 (888)
                         ...++|||++ |++|.+++..   ...+++..+..|+.||+.||.|||+.  .|||||||||+||||+.++      
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccc
Confidence               3678999988 7788888843   34689999999999999999999971  3899999999999998665      


Q ss_pred             ----------ceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Q 002719          665 ----------VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA  734 (888)
Q Consensus       665 ----------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~P  734 (888)
                                .+||+|||++......           .+...||+.|+|||++.+..|+.++|||||||+||||++|++|
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~~~~-----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p  344 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDERHS-----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL  344 (467)
T ss_pred             cccccCCCCceEEECCCCccccCccc-----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                      4999999987532211           1234689999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHhhcccc-----------------cccCC---CCCC---------------CChhhHHHHHHHHHHHhhc
Q 002719          735 LGITKEVQYALDTGKLK-----------------NLLDP---LAGD---------------WPFVQAEQLANLAMRCCEM  779 (888)
Q Consensus       735 f~~~~~~~~~~~~~~~~-----------------~~ld~---~~~~---------------~p~~~~~~l~~Li~~Cl~~  779 (888)
                      |................                 .+...   ....               ........+.+||.+||.+
T Consensus       345 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~  424 (467)
T PTZ00284        345 YDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY  424 (467)
T ss_pred             CCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc
Confidence            97655432211100000                 00000   0000               0001234678999999999


Q ss_pred             CCCCCCChHHHH
Q 002719          780 SRKSRPELGKDV  791 (888)
Q Consensus       780 dP~~RPs~~~~v  791 (888)
                      ||.+||++ +++
T Consensus       425 dP~~R~ta-~e~  435 (467)
T PTZ00284        425 DRQKRLNA-RQM  435 (467)
T ss_pred             ChhhCCCH-HHH
Confidence            99999999 444

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=4.3e-34  Score=308.12  Aligned_cols=249  Identities=22%  Similarity=0.366  Sum_probs=185.0

Q ss_pred             eeeecCceEEEEEEEC----CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||+|...    ...+++|.+...... ....+.+|+.+++.++||||+++++.|.  ...++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            5999999999999653    246888887644322 2346889999999999999999999874  46899999999999


Q ss_pred             hhhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          608 LEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       608 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |.+++.....  ...+++.....++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++...........
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            9999965432  2335677889999999999999999   8999999999999999999999999999865432211100


Q ss_pred             CccccccCCCCCCcccCChhhhcc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCC
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLAS-------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                            .....+++.|+|||++..       ..++.++|||||||++|+|++ |.+||............. ........
T Consensus       159 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~  231 (269)
T cd05042         159 ------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV-REQDIKLP  231 (269)
T ss_pred             ------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-hccCccCC
Confidence                  122346778999999753       356789999999999999999 788886554322111110 01111111


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ....+...+..+.+++..|| .||.+||++ ++|.+.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~-~~v~~~l  267 (269)
T cd05042         232 KPQLDLKYSDRWYEVMQFCW-LDPETRPTA-EEVHELL  267 (269)
T ss_pred             CCcccccCCHHHHHHHHHHh-cCcccccCH-HHHHHHh
Confidence            12233345577888999999 599999998 7776665

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=313.07  Aligned_cols=245  Identities=28%  Similarity=0.387  Sum_probs=195.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      .++|.+.+.||.|+||.||+|.+.  +..||+|.+..........+..|+.++++++||||+++++++  ....++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            356889999999999999999875  578999998765444456788999999999999999999987  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++...  ...+++..+..++.|++.||.|||+   ++|+|+||||+||+++.++.++|+|||++........
T Consensus        84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence            9999999998533  3468999999999999999999999   8999999999999999999999999998875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                              ......|++.|+|||.+.     +..++.++|||||||++|+|++|++||...............   ..+ 
T Consensus       159 --------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~-  226 (280)
T cd06611         159 --------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS---EPP-  226 (280)
T ss_pred             --------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC---CCC-
Confidence                    112335899999999985     345778999999999999999999999765543322221111   001 


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      ....+...+..+.+++.+||+.+|.+||++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  257 (280)
T cd06611         227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAA  257 (280)
T ss_pred             CcCCcccCCHHHHHHHHHHhccChhhCcCHH
Confidence            0111233457899999999999999999994

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.3e-34  Score=313.76  Aligned_cols=241  Identities=24%  Similarity=0.315  Sum_probs=192.1

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      |...+.||.|+||+||+|.+.  ++.||+|.+......   ....+.+|+.+|+.++|+||+.+++++  .+..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            667788999999999999886  578999998754322   234578899999999999999998877  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++... ....+++..+..++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||++........
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05632          82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES  157 (285)
T ss_pred             ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence            9999999888533 23469999999999999999999999   8999999999999999999999999999875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-hcccccccCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~-~~~~~~~ld~~~~~~  761 (888)
                               .....|+..|+|||++.+..++.++|||||||++|+|++|.+||........... .......    ...+
T Consensus       158 ---------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~----~~~~  224 (285)
T cd05632         158 ---------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET----EEVY  224 (285)
T ss_pred             ---------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc----cccc
Confidence                     1223589999999999988999999999999999999999999976543221111 1111111    1122


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +...+..+.+|+..||+.||.+||+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05632         225 SAKFSEEAKSICKMLLTKDPKQRLGC  250 (285)
T ss_pred             CccCCHHHHHHHHHHccCCHhHcCCC
Confidence            33345678999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.8e-34  Score=314.63  Aligned_cols=242  Identities=24%  Similarity=0.324  Sum_probs=191.1

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      |...+.||+|+||.||++...  ++.||+|.+.......   ...+.+|+.+++.++|+||+.+++.+  .+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667788999999999999886  5789999987543222   24577899999999999999999987  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++.... ...+++..+..++.|++.||.|||+   ++|+||||||+||+++.++.++|+|||++........
T Consensus        82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            99999999885432 2458999999999999999999999   8999999999999999999999999999875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                               .....|+..|+|||++.+..++.++|||||||++|+|++|++||..........   .............+
T Consensus       158 ---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~  225 (285)
T cd05630         158 ---------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE---EVERLVKEVQEEYS  225 (285)
T ss_pred             ---------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH---HHHhhhhhhhhhcC
Confidence                     112358999999999999999999999999999999999999997542210000   00001111111223


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ...+..+.+|+.+||+.||.+||++
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~R~s~  250 (285)
T cd05630         226 EKFSPDARSLCKMLLCKDPKERLGC  250 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHccCC
Confidence            3445679999999999999999994

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-34  Score=309.72  Aligned_cols=245  Identities=27%  Similarity=0.456  Sum_probs=189.5

Q ss_pred             eeeecCceEEEEEEECC----eEEEEEEecCCC-CCChhHHHHHHHHHHhc-CCCCeeeeecccC--CceEEEEEecCCC
Q 002719          535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~~LV~Ey~~gg  606 (888)
                      .||+|+||.||+|.+.+    ..+++|.+.... ......+.+|+.++.++ +||||++++++|.  ...++||||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            58999999999998753    357888887432 22345788999999999 7999999999884  4688999999999


Q ss_pred             ChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          607 SLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       607 sL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      +|.+++....             ....+++..++.++.|++.||.|||+   +|++||||||+|||++.++.+||+|||+
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence            9999985432             12358899999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKN  752 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~  752 (888)
                      +.......  .       ......++.|+|||++....++.++|||||||++|+|++ |..||............     
T Consensus       159 ~~~~~~~~--~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-----  224 (270)
T cd05047         159 SRGQEVYV--K-------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----  224 (270)
T ss_pred             ccccchhh--h-------ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-----
Confidence            85322110  0       011224667999999988899999999999999999997 99999654332211111     


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                       ........+...+..+.+|+.+||..+|.+||++ .+++..|+.+
T Consensus       225 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il~~l~~~  268 (270)
T cd05047         225 -PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRM  268 (270)
T ss_pred             -hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHh
Confidence             0001111223345679999999999999999999 6777776654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4.8e-34  Score=306.38  Aligned_cols=250  Identities=29%  Similarity=0.507  Sum_probs=200.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEecC
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLP  604 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey~~  604 (888)
                      ..+|.+.++||+|+||.||+|.+. +..|++|.+.... .....+.+|+.+++.++|+||+++++++. ...+++|||++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA   83 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence            357889999999999999999865 4679999887542 23457889999999999999999998874 46789999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.... ...+++..+..++.+++.||.|||+   .|++|+||||+||+++.++.+||+|||++..+.......
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  159 (260)
T cd05073          84 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA  159 (260)
T ss_pred             CCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence            999999996432 3457888999999999999999999   899999999999999999999999999987654322111


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH--HhhcccccccCCCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~--~~~~~~~~~ld~~~~~~  761 (888)
                             .....++..|+|||++..+.++.++|+|||||++|+++| |.+||.........  +..+.    .    ...
T Consensus       160 -------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----~----~~~  224 (260)
T cd05073         160 -------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----R----MPR  224 (260)
T ss_pred             -------ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC----C----CCC
Confidence                   112346678999999998889999999999999999999 99999765432211  11110    0    011


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      +...+..+.+++.+||+.+|.+||++ ..+...|+.
T Consensus       225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~-~~l~~~L~~  259 (260)
T cd05073         225 PENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLDD  259 (260)
T ss_pred             cccCCHHHHHHHHHHcccCcccCcCH-HHHHHHHhc
Confidence            22345789999999999999999999 777777764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=4.2e-34  Score=319.05  Aligned_cols=259  Identities=24%  Similarity=0.381  Sum_probs=202.2

Q ss_pred             CCCCccceeeecCceEEEEEEECC---------eEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeecccC--C
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E  594 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~---------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~  594 (888)
                      .+|.+.+.||+|+||.||++...+         ..||+|.+..... .....+.+|+.+++++ +||||++++++|.  +
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            468899999999999999997531         3689998875422 2245788999999999 7999999999884  4


Q ss_pred             ceEEEEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD  661 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~  661 (888)
                      ..+++|||+++|+|.+++....             ....+++..+..++.|++.||.|||.   +||+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence            6889999999999999986432             12358889999999999999999999   8999999999999999


Q ss_pred             CCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH
Q 002719          662 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE  740 (888)
Q Consensus       662 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~  740 (888)
                      .++.+||+|||+++.........      ......++..|+|||.+.+..++.++|||||||++|+|++ |.+||.....
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  242 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV  242 (334)
T ss_pred             CCCcEEECCcccceecccccccc------cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence            99999999999987654322111      0112235678999999999999999999999999999998 8899875543


Q ss_pred             HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccccC
Q 002719          741 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC  802 (888)
Q Consensus       741 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~~  802 (888)
                      ........      .......+...+..+.+|+.+||+.+|.+||++ .+++..|+.+....
T Consensus       243 ~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~ell~~l~~~~~~~  297 (334)
T cd05100         243 EELFKLLK------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTF-KQLVEDLDRVLTVT  297 (334)
T ss_pred             HHHHHHHH------cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHhhhc
Confidence            32211110      111112233445789999999999999999999 77888888776543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.4e-34  Score=310.57  Aligned_cols=256  Identities=27%  Similarity=0.357  Sum_probs=201.4

Q ss_pred             CChhhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccC-
Q 002719          518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP-  593 (888)
Q Consensus       518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~-  593 (888)
                      +.+.++..++++|.+...||+|+||.||++...  ++.+|+|++.... .....+.+|+.++.++ +||||++++++|. 
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            456777888999999999999999999999875  5789999986542 2245688899999999 8999999999873 


Q ss_pred             ------CceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          594 ------EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       594 ------~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                            ...++||||+++|+|.+++... .....+++..++.++.|++.||.|||+   ++++||||||+||+++.++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence                  2478999999999999988532 234568999999999999999999999   899999999999999999999


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCchHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGITKEV  741 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~  741 (888)
                      ||+|||++.........        .....|+..|+|||.+...     .++.++|||||||++|+|++|++||......
T Consensus       168 kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~  239 (291)
T cd06639         168 KLVDFGVSAQLTSTRLR--------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV  239 (291)
T ss_pred             EEeecccchhccccccc--------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH
Confidence            99999998765432211        1223588999999998654     3688999999999999999999999765443


Q ss_pred             HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          742 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       742 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .........  .....  ..+......+.+|+.+||+.+|.+||++.+
T Consensus       240 ~~~~~~~~~--~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  283 (291)
T cd06639         240 KTLFKIPRN--PPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTH  283 (291)
T ss_pred             HHHHHHhcC--CCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHH
Confidence            322221110  00000  112223457999999999999999999943

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.9e-34  Score=316.37  Aligned_cols=194  Identities=25%  Similarity=0.398  Sum_probs=157.5

Q ss_pred             cceeeecCceEEEEEEEC----CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc----CCceEEEEEecC
Q 002719          533 SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLVYEYLP  604 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~----~~~~~LV~Ey~~  604 (888)
                      .++||+|+||.||+|...    +..||+|.+....  ....+.+|+.+|+.++||||+++++++    ....++||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            457999999999999864    3679999986543  234678999999999999999999987    235789999985


Q ss_pred             CCChhhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE----cCCCceeeeccccc
Q 002719          605 NGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFGIS  674 (888)
Q Consensus       605 ggsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl----~~~~~vKL~DFGla  674 (888)
                       ++|.+++...      .....+++..+..++.||+.||.|||+   +||+||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             5787776422      122358999999999999999999999   899999999999999    45679999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGI  737 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~  737 (888)
                      +.+.......     .......||+.|+|||++.+. .++.++|||||||++|+|++|++||..
T Consensus       160 ~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         160 RLFNSPLKPL-----ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             eccCCCCccc-----cccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            8764332111     111234689999999999774 589999999999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=8.7e-34  Score=303.00  Aligned_cols=248  Identities=26%  Similarity=0.490  Sum_probs=196.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecC
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP  604 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~  604 (888)
                      .+|++.+.||.|+||.||+|.+. +..+|+|.+.... .....+.+|++++++++||||+++++++.  ...++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            36778889999999999999876 6789999886543 23457999999999999999999999883  46889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++...  ...+++..++.++.+++.||.|||+   ++++||||||+||+++.++.+||+|||++..........
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~  157 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS  157 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence            99999998533  2458899999999999999999999   899999999999999999999999999987654321110


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             .....++..|+|||.+.++.++.++||||||+++|+|++ |.+||..................      ..+.
T Consensus       158 -------~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~  224 (256)
T cd05112         158 -------STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL------YKPR  224 (256)
T ss_pred             -------cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC------CCCC
Confidence                   112235678999999998899999999999999999998 99999755432221111110111      1122


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+..+.+|+.+||+.+|.+||++ .++++.|
T Consensus       225 ~~~~~~~~l~~~~l~~~p~~Rp~~-~~~l~~l  255 (256)
T cd05112         225 LASQSVYELMQHCWKERPEDRPSF-SLLLHQL  255 (256)
T ss_pred             CCCHHHHHHHHHHcccChhhCCCH-HHHHHhh
Confidence            345789999999999999999999 6666554

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.7e-34  Score=312.65  Aligned_cols=260  Identities=25%  Similarity=0.410  Sum_probs=196.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC----Cce
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVW  596 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~  596 (888)
                      ..|.+.+.||+|+||.||.+.+.      +..||+|.+..... .....+.+|+.+++.++||||+++++++.    ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            35788899999999999999752      56799999875532 23457899999999999999999999873    357


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||++|++|.+++...  ...+++..++.++.|++.||.|||+   +|++||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccc
Confidence            8999999999999998533  2358999999999999999999999   8999999999999999999999999999986


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-----h----
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-----T----  747 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~-----~----  747 (888)
                      +.......     .......++..|+|||.+.+..++.++|||||||++|+|+|++.|+...........     .    
T Consensus       159 ~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05079         159 IETDKEYY-----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVT  233 (284)
T ss_pred             cccCccce-----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHH
Confidence            64332110     011233477889999999888899999999999999999998776532111000000     0    


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .....+........+...+..+.+|+.+||+.+|.+||++ +++++.|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l~~~  283 (284)
T cd05079         234 RLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTF-QNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCH-HHHHHHHHhh
Confidence            0000000001111123345789999999999999999999 7777776653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=3.3e-34  Score=308.60  Aligned_cols=246  Identities=25%  Similarity=0.453  Sum_probs=193.9

Q ss_pred             eeeecCceEEEEEEECC--------eEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          535 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~--------~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .||+|+||.||+|....        ..||||.+.... ......+.+|+.+++.++||||++++++|  .+..++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            59999999999998753        569999886543 23356788999999999999999999987  45689999999


Q ss_pred             CCCChhhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-----ceeeeccccc
Q 002719          604 PNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-----VSKLSDFGIS  674 (888)
Q Consensus       604 ~ggsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-----~vKL~DFGla  674 (888)
                      ++++|.+++....    ....+++..++.++.|++.||.|||+   .+++|+||||+||+++.++     .++|+|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            9999999986431    23458899999999999999999999   8999999999999999877     8999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      ...........      .....++..|+|||++.++.++.++|||||||++|+|+| |..||..............    
T Consensus       159 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----  228 (269)
T cd05044         159 RDIYKSDYYRK------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA----  228 (269)
T ss_pred             ccccccccccc------CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc----
Confidence            76543221111      112346788999999999999999999999999999998 9999975543332211110    


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                        ......+...+..+.+|+.+||..+|.+||++ +++.+.|+
T Consensus       229 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~  268 (269)
T cd05044         229 --GGRLQKPENCPDKIYQLMTNCWAQDPSERPTF-DRIQEILQ  268 (269)
T ss_pred             --CCccCCcccchHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence              01112234456789999999999999999999 67776664

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.4e-34  Score=309.12  Aligned_cols=245  Identities=35%  Similarity=0.533  Sum_probs=192.2

Q ss_pred             CCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCChh--HHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~~~--~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      |+..+.||+|+||+||++...+  ..||+|++.........  ...+|+.+++.++||||+++++++  ....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5678899999999999999874  57999999876433222  235699999999999999999988  45788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++.   ....+++..++.++.|++.||.+||+   ++|+|+||||+||+++.++.++|+|||.+........ 
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~-  153 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE-  153 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS-
T ss_pred             cccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc-
Confidence            9999999995   34568999999999999999999999   8999999999999999999999999999875411110 


Q ss_pred             CCCccccccCCCCCCcccCChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHhhcccccccCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~ld~~~~~  760 (888)
                             ......++..|+|||++. +..++.++||||||+++|+|++|..||....  ...................  
T Consensus       154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  224 (260)
T PF00069_consen  154 -------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ--  224 (260)
T ss_dssp             -------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT--
T ss_pred             -------ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc--
Confidence                   113345899999999998 7889999999999999999999999998662  1111111111111110000  


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ........+.+++.+||+.||.+||++ .++
T Consensus       225 ~~~~~~~~l~~li~~~l~~~p~~R~~~-~~l  254 (260)
T PF00069_consen  225 QSREKSEELRDLIKKMLSKDPEQRPSA-EEL  254 (260)
T ss_dssp             SHTTSHHHHHHHHHHHSSSSGGGSTTH-HHH
T ss_pred             ccchhHHHHHHHHHHHccCChhHCcCH-HHH
Confidence            011123789999999999999999998 444

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3e-34  Score=311.18  Aligned_cols=235  Identities=26%  Similarity=0.413  Sum_probs=181.1

Q ss_pred             eeeecCceEEEEEEEC--------------------------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeee
Q 002719          535 KIGEGGYGSIYKGLLR--------------------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL  588 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--------------------------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l  588 (888)
                      .||+|+||.||+|.+.                          ...|++|++..........|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5999999999999742                          13589999875443334568889999999999999999


Q ss_pred             eccc--CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC--
Q 002719          589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF--  664 (888)
Q Consensus       589 ~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~--  664 (888)
                      +++|  ....++||||+++|+|..++...  ...+++..+..++.|++.||.|||+   ++|+||||||+|||++..+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcc
Confidence            9998  34678999999999999988532  3468899999999999999999999   8999999999999997543  


Q ss_pred             -----ceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHH-hCCCCCCC
Q 002719          665 -----VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLL-TGRPALGI  737 (888)
Q Consensus       665 -----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~ell-tG~~Pf~~  737 (888)
                           .+||+|||++......            ....++..|+|||.+.+ ..++.++|||||||++|+|+ +|.+||..
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~  224 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKE  224 (274)
T ss_pred             cCccceeeecCCccccccccc------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccc
Confidence                 4899999987543211            12247888999998875 56899999999999999994 79999965


Q ss_pred             chHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          738 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       738 ~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .............    .    ..+......+.+++.+||+.+|.+||++ .++++.|
T Consensus       225 ~~~~~~~~~~~~~----~----~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~il~~L  273 (274)
T cd05076         225 RTPSEKERFYEKK----H----RLPEPSCKELATLISQCLTYEPTQRPSF-RTILRDL  273 (274)
T ss_pred             cChHHHHHHHHhc----c----CCCCCCChHHHHHHHHHcccChhhCcCH-HHHHHhh
Confidence            4332211110000    0    1111223579999999999999999999 5555544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.3e-34  Score=319.73  Aligned_cols=246  Identities=23%  Similarity=0.289  Sum_probs=188.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||++...  +..||+|++....   ......+.+|+.++..++||||+++++++  .+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999999999876  4779999986532   12234578899999999999999999988  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++...  ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++..+...
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            999999999999542  3468899999999999999999999   89999999999999999999999999999765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ....       .....||+.|+|||++.+     +.++.++|||||||+||+|++|+.||..................+ 
T Consensus       156 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-  227 (331)
T cd05624         156 GTVQ-------SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-  227 (331)
T ss_pred             Ccee-------eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-
Confidence            2111       122458999999999875     568889999999999999999999997654433221111000000 


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCC--CCCh
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKS--RPEL  787 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~--RPs~  787 (888)
                      +... .....+..+.+|+.+|+..++.+  |+++
T Consensus       228 ~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~  260 (331)
T cd05624         228 QFPS-HITDVSEEAKDLIQRLICSRERRLGQNGI  260 (331)
T ss_pred             cCCC-ccccCCHHHHHHHHHHccCchhhcCCCCH
Confidence            0111 11123578999999999865543  3455

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-34  Score=308.74  Aligned_cols=241  Identities=28%  Similarity=0.380  Sum_probs=195.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|...+.||.|+||.||+|...  +..||+|.+.... ......+.+|+.+++.++||||+++++++  ....++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            6788889999999999999875  5789999987543 22345688999999999999999999987  34688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++..    .++++..++.++.|++.||.|||+   ++++||||+|+||+++.++.++|+|||++..+......
T Consensus        82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  154 (274)
T cd06609          82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK  154 (274)
T ss_pred             CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence            99999999842    278999999999999999999999   89999999999999999999999999999876543211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              .....|++.|+|||++.+..++.++|||||||++|+|+||.+||.............   ....+   ..+.
T Consensus       155 --------~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~---~~~~~---~~~~  220 (274)
T cd06609         155 --------RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP---KNNPP---SLEG  220 (274)
T ss_pred             --------cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh---hcCCC---CCcc
Confidence                    123458889999999998889999999999999999999999997554332211111   01111   1111


Q ss_pred             h-hHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          764 V-QAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       764 ~-~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      . .+..+.+++.+||..+|.+||++ +++
T Consensus       221 ~~~~~~~~~~l~~~l~~~p~~Rpt~-~~i  248 (274)
T cd06609         221 NKFSKPFKDFVSLCLNKDPKERPSA-KEL  248 (274)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcCH-HHH
Confidence            1 45679999999999999999999 444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.3e-34  Score=303.53  Aligned_cols=243  Identities=23%  Similarity=0.346  Sum_probs=195.2

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--C-ceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--E-VWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~-~~~LV~E  601 (888)
                      +|.+.+.||+|+||.||++...  +..||+|.+.....  .....+.+|+.++++++|||++++++.+.  + ..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4788899999999999999875  47899999865432  22456889999999999999999998763  2 4789999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++++|.+++... ....+++..++.++.+++.||.|||+   +|++||||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            99999999998543 23468999999999999999999999   899999999999999999999999999988664322


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..        .....|++.|+|||++.+..++.++|||||||++|+|++|+.||............  ....+    ...
T Consensus       157 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~--~~~~~----~~~  222 (257)
T cd08223         157 DM--------ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRI--IEGKL----PPM  222 (257)
T ss_pred             Cc--------cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HhcCC----CCC
Confidence            11        12345889999999999999999999999999999999999999765432221111  11111    112


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      +...+..+.+++.+||+.+|.+||++.+
T Consensus       223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~  250 (257)
T cd08223         223 PKDYSPELGELIATMLSKRPEKRPSVKS  250 (257)
T ss_pred             ccccCHHHHHHHHHHhccCcccCCCHHH
Confidence            3345578999999999999999999843

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.4e-34  Score=328.44  Aligned_cols=245  Identities=22%  Similarity=0.306  Sum_probs=188.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC----CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      .+|.+.+.||.|+||.||++...    +..||+|.+...     ..+.+|+.+|+.++||||+++++++.  ...++|||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            47999999999999999999764    367999987643     24678999999999999999999884  57899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+. ++|.+++.   ....+++..++.|+.||+.||.|||+   +||+||||||+|||++.++.+||+|||++..+....
T Consensus       167 ~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        167 KYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             hcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence            995 68888883   34569999999999999999999999   899999999999999999999999999997654432


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhhcc------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGK------  749 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~------~~~~~~~~~------  749 (888)
                      ....      .....||+.|+|||++.+..++.++|||||||+||+|++|+.||.....      .........      
T Consensus       240 ~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~  313 (392)
T PHA03207        240 DTPQ------CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF  313 (392)
T ss_pred             cccc------ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence            1111      1234699999999999999999999999999999999999999854321      000000000      


Q ss_pred             -----------cccccCCCCCCC--C-----hhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          750 -----------LKNLLDPLAGDW--P-----FVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       750 -----------~~~~ld~~~~~~--p-----~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                                 +..........+  +     ...+..+.++|.+||..||.+||++.+.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~  372 (392)
T PHA03207        314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI  372 (392)
T ss_pred             CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence                       000000000000  0     1234578899999999999999999443

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3e-34  Score=311.55  Aligned_cols=243  Identities=26%  Similarity=0.359  Sum_probs=188.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|.+.+.||+|+||.||+|.+.  +..||+|.+..... .....+.+|+.++++++||||++++++|  .+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            5778889999999999999874  57899999865422 2235688999999999999999999987  45788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|..+.       .+++..+..++.|++.||.|||+   +||+|+||||+|||++.++.+||+|||++..+....  
T Consensus        82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--  149 (279)
T cd06619          82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--  149 (279)
T ss_pred             CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence            999996543       36788999999999999999999   899999999999999999999999999987653221  


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-HhhcccccccCCCCCCC-
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-LDTGKLKNLLDPLAGDW-  761 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~~~~~ld~~~~~~-  761 (888)
                              .....||..|+|||++.+..++.++|||||||++|+|++|+.||......... ..........+...... 
T Consensus       150 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (279)
T cd06619         150 --------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP  221 (279)
T ss_pred             --------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC
Confidence                    12345899999999999889999999999999999999999999542211000 00000001111111111 


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ....+..+.+++.+||+.+|.+||++ ++++
T Consensus       222 ~~~~~~~~~~li~~~l~~~P~~Rp~~-~eil  251 (279)
T cd06619         222 VGQFSEKFVHFITQCMRKQPKERPAP-ENLM  251 (279)
T ss_pred             CCcCCHHHHHHHHHHhhCChhhCCCH-HHHh
Confidence            11234679999999999999999999 4443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.7e-34  Score=311.48  Aligned_cols=247  Identities=28%  Similarity=0.405  Sum_probs=194.1

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|++.+.||+|+||.||++.+.  +..||+|.+..... .....+.+|+.++++++||||+++++++  ....++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5788899999999999999886  68899998865422 2235688999999999999999999987  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|..++........+++..+..++.+++.||.|||+.  .+|+||||||+||+++.++.+||+|||++..+....  
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--  157 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL--  157 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--
Confidence            9999999885433344789999999999999999999962  489999999999999999999999999987653221  


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~------~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                              .....|++.|+|||.+.+.      .++.++|||||||++|+|++|+.||...........   +..+....
T Consensus       158 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~  226 (286)
T cd06622         158 --------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ---LSAIVDGD  226 (286)
T ss_pred             --------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH---HHHHhhcC
Confidence                    1223478899999998554      357899999999999999999999965432211111   11111111


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ....+...+..+.+|+.+||..+|.+||++ +++
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~l  259 (286)
T cd06622         227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTY-AQL  259 (286)
T ss_pred             CCCCCcccCHHHHHHHHHHcccCcccCCCH-HHH
Confidence            222344466889999999999999999999 444

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-35  Score=325.90  Aligned_cols=246  Identities=24%  Similarity=0.376  Sum_probs=201.2

Q ss_pred             CCCccceeeecCceEEEEEEECCeE--EEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~~~--VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .|.++..||.|+||.||++..+.+.  .|.|++........+.|.-||+||..++||+||+|++.|  ...++|+.|||.
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~  112 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG  112 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence            4667778999999999999887543  577888877777778899999999999999999999854  678999999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      ||-.+.++...  ..+|++.++..+++|++.||.|||+   ++|||||||..|||++-+|.++|+|||.+.....     
T Consensus       113 GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-----  182 (1187)
T KOG0579|consen  113 GGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-----  182 (1187)
T ss_pred             CchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh-----
Confidence            99998887533  4579999999999999999999999   8999999999999999999999999998754322     


Q ss_pred             CCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                         +...+..+.|||+|||||+..     ..+|+.++||||||++|.||..+.||....+.....+...+-.   +|.. 
T Consensus       183 ---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe---PPTL-  255 (1187)
T KOG0579|consen  183 ---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PPTL-  255 (1187)
T ss_pred             ---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC---CCcc-
Confidence               222345678999999999874     4589999999999999999999999987666554444332211   1111 


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      -.|...+..+.+++.+||.+||..||+.++.+
T Consensus       256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll  287 (1187)
T KOG0579|consen  256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLL  287 (1187)
T ss_pred             cCcchhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence            12445567899999999999999999985443

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.4e-34  Score=304.63  Aligned_cols=234  Identities=29%  Similarity=0.468  Sum_probs=184.9

Q ss_pred             eeeecCceEEEEEEECCe------------EEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEE
Q 002719          535 KIGEGGYGSIYKGLLRHM------------QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE  601 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~~------------~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~E  601 (888)
                      .||+|+||.||+|.+...            .|++|.+...... ...+.+|+.+|+.++||||+++++++. ...++|||
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            599999999999988643            3888887654433 568899999999999999999999873 56789999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-------ceeeeccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-------VSKLSDFGIS  674 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-------~vKL~DFGla  674 (888)
                      |+++|+|.+++....  ..+++..++.++.||+.||.|||+   +||+||||||+|||++.++       .+||+|||++
T Consensus        81 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          81 YVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             cCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            999999999985432  268999999999999999999999   8999999999999999887       7999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccC--CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      ......            ....++..|+|||++.+.  .++.++|||||||++|+|++ |..||.............   
T Consensus       156 ~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---  220 (259)
T cd05037         156 ITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---  220 (259)
T ss_pred             cccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---
Confidence            765431            122367789999999876  78999999999999999999 577885543221111100   


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                         ..  ...+......+.+++.+||..+|.+||++ .++++.|
T Consensus       221 ---~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l  258 (259)
T cd05037         221 ---DQ--HRLPMPDCAELANLINQCWTYDPTKRPSF-RAILRDL  258 (259)
T ss_pred             ---cC--CCCCCCCchHHHHHHHHHhccChhhCCCH-HHHHHhc
Confidence               00  01111122689999999999999999999 5665554

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-35  Score=320.71  Aligned_cols=258  Identities=28%  Similarity=0.479  Sum_probs=206.7

Q ss_pred             CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      ...+.++||+|-||.|.++...+ ..||+|+++.....+ ...|.+|+++|.+|+|||||.|+|+|  ++.+++|+||++
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE  618 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME  618 (807)
T ss_pred             heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence            45567889999999999998887 899999999876555 47899999999999999999999999  678999999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|..+|..... +.+......+|+.||+.|++||.+   .++|||||.+.|+|++.++++||+|||+++.+.......
T Consensus       619 nGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  619 NGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             cCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            9999999965532 224556677899999999999999   789999999999999999999999999999665544322


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCchHHHHHHhhcccccccC-CCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYALDTGKLKNLLD-PLAGDW  761 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~~~~~~~~~~~~~~~~ld-~~~~~~  761 (888)
                      .      ....+-.++|||||.+.-++++.++|||+||+++||+++  ...||......+..-+.+.+..-.. ......
T Consensus       695 v------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~  768 (807)
T KOG1094|consen  695 V------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR  768 (807)
T ss_pred             e------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence            1      123345789999999999999999999999999999865  7788865544333323322222111 112234


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      |..++..+.+|+.+||..+-.+||++ +.|...|+.
T Consensus       769 P~~cp~~lyelml~Cw~~es~~RPsF-e~lh~~lq~  803 (807)
T KOG1094|consen  769 PPACPQGLYELMLRCWRRESEQRPSF-EQLHLFLQE  803 (807)
T ss_pred             CCcCcHHHHHHHHHHhchhhhcCCCH-HHHHHHHHH
Confidence            66777899999999999999999999 666555543

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=6.3e-34  Score=312.43  Aligned_cols=243  Identities=25%  Similarity=0.360  Sum_probs=193.8

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      |.....||+|+||.||++...  +..||+|.+..........+.+|+.++..++||||++++++|  .+..++||||+++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            334457999999999999874  688999998765545566788999999999999999999987  4578999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|..++.    ...+++..++.++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++..+......  
T Consensus       103 ~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~--  173 (297)
T cd06659         103 GALTDIVS----QTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--  173 (297)
T ss_pred             CCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc--
Confidence            99999773    2458899999999999999999999   89999999999999999999999999998755432211  


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                            .....|+..|+|||++.+..++.++|||||||++|+|++|++||...............   ..+.. ..+...
T Consensus       174 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~-~~~~~~  243 (297)
T cd06659         174 ------RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPPKL-KNAHKI  243 (297)
T ss_pred             ------ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CCCCc-cccCCC
Confidence                  12235899999999999889999999999999999999999999755443322211110   01111 111233


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      +..+.+++.+||+.+|.+||++ ++++
T Consensus       244 ~~~l~~~i~~~l~~~P~~Rps~-~~ll  269 (297)
T cd06659         244 SPVLRDFLERMLTREPQERATA-QELL  269 (297)
T ss_pred             CHHHHHHHHHHhcCCcccCcCH-HHHh
Confidence            4679999999999999999999 4543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=4.1e-34  Score=309.87  Aligned_cols=242  Identities=27%  Similarity=0.389  Sum_probs=193.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .|...+.||.|+||.||+|.+.  +..||+|.+..... .....+.+|+.+++.++||||++++++|  ....++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3566778999999999999875  57899999875432 2235688999999999999999999988  44689999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++.    ...+++..+..++.+++.||.|||+   ++++|+||+|+||+++.++.++|+|||++..+..... 
T Consensus        85 ~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06642          85 GGGSALDLLK----PGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence            9999999884    2458899999999999999999999   8999999999999999999999999999876543221 


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             ......|+..|+|||++.+..++.++|||||||++|+|++|++||............      ........+.
T Consensus       157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------~~~~~~~~~~  223 (277)
T cd06642         157 -------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI------PKNSPPTLEG  223 (277)
T ss_pred             -------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh------hcCCCCCCCc
Confidence                   112235789999999999889999999999999999999999999644322211110      1111112233


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..+..+.+++.+||..+|.+||++.+.+
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il  251 (277)
T cd06642         224 QYSKPFKEFVEACLNKDPRFRPTAKELL  251 (277)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            4457899999999999999999994443

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.3e-34  Score=310.62  Aligned_cols=259  Identities=26%  Similarity=0.445  Sum_probs=200.0

Q ss_pred             CCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccCC----ceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE----VWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----~~~  597 (888)
                      .|...+.||+|+||.||+|.+.      +..||||.+...... ....|.+|+.+++.+.||||+++++++..    ..+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            5677789999999999999864      468999999865443 35679999999999999999999998743    688


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||+++++|.+++...  ...+++..++.++.|++.||.|||+   +|++|+||||+||+++.++.++|+|||++...
T Consensus        85 lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             EEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            999999999999999533  2358999999999999999999999   89999999999999999999999999999876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--------Hhhcc
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--------LDTGK  749 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--------~~~~~  749 (888)
                      .......     .......++..|++||.+.+..++.++||||||+++|+|+||..||.........        .....
T Consensus       160 ~~~~~~~-----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd05038         160 PEDKDYY-----YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR  234 (284)
T ss_pred             ccCCcce-----eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence            5322110     0111223566799999998889999999999999999999999988543211100        00000


Q ss_pred             ccccc-CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          750 LKNLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       750 ~~~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      +...+ .......+...+..+.+|+.+||..+|.+||++ .+|+++|+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~i  283 (284)
T cd05038         235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSF-ADLILIVDRL  283 (284)
T ss_pred             HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCH-HHHHHHHhhc
Confidence            00000 001111123345789999999999999999999 7888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=7.5e-34  Score=311.92  Aligned_cols=247  Identities=24%  Similarity=0.334  Sum_probs=189.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ++|...+.||.|+||.||+|...  +..||+|.+..... .....+.+|+.+++.++||||+++++++  ....++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            46888999999999999999875  57899999875432 2345678999999999999999999998  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      ++ ++|..++...  ...+++..+..++.|++.||.|||+   ++|+|+||||+|||++.++.+||+|||++........
T Consensus        86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            97 5888887533  3458899999999999999999999   8999999999999999999999999999875432211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------ccc
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKN  752 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~---------~~~  752 (888)
                      .        .....+++.|+|||.+.+. .++.++|||||||++|+|+||++||..............         +..
T Consensus       160 ~--------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (301)
T cd07873         160 T--------YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG  231 (301)
T ss_pred             c--------ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence            1        1223478999999998754 578899999999999999999999976543221111000         000


Q ss_pred             ccCC------CCC--------CCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          753 LLDP------LAG--------DWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       753 ~ld~------~~~--------~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .+..      ...        ......+..+.+|+.+||..||.+||++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~  281 (301)
T cd07873         232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE  281 (301)
T ss_pred             hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence            0000      000        01112356789999999999999999994

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-33  Score=310.44  Aligned_cols=259  Identities=23%  Similarity=0.261  Sum_probs=199.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      +|...+.||+|+||.||++...  +..||||.+......   ....+..|+++|..++||||+++++.+.  ...++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            6888899999999999999886  588999999765433   3456889999999999999999999873  46899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+.+++|.+++... ....+++..+..++.|++.||.|||+   .|++||||||+||+++.++.++|+|||++.......
T Consensus        82 ~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          82 YCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             ecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            99999999988533 33568999999999999999999999   899999999999999999999999999987653321


Q ss_pred             ccCCCc---------------------cccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH
Q 002719          682 ISSNNT---------------------TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE  740 (888)
Q Consensus       682 ~~~~~~---------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~  740 (888)
                      ......                     .........||..|+|||++.+..++.++||||||+++|+|++|..||.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            110000                     00011233689999999999988899999999999999999999999976554


Q ss_pred             HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          741 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       741 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ......... ...    ........+..+.+++.+||..+|.+||+....+.++|.
T Consensus       238 ~~~~~~~~~-~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         238 DETFSNILK-KEV----TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHHhc-CCc----cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            332221110 000    000111146789999999999999999995444444443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=8.5e-34  Score=312.91  Aligned_cols=246  Identities=25%  Similarity=0.365  Sum_probs=191.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ++|.+.+.||+|+||.||++.+.  +..+|+|.+...... ....+.+|++++++++||||++++++|  .+..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36889999999999999999876  567899988754221 234688999999999999999999988  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++...   ..+++..+..++.|++.||.|||+.  .+++||||||+|||++.++.+||+|||++....... 
T Consensus        81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  154 (308)
T cd06615          81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-  154 (308)
T ss_pred             cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence            9999999999533   5688999999999999999999972  479999999999999999999999999987543221 


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc-c--------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN-L--------  753 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~-~--------  753 (888)
                               .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||................. .        
T Consensus       155 ---------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (308)
T cd06615         155 ---------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRP  225 (308)
T ss_pred             ---------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccc
Confidence                     1223588999999999888899999999999999999999999964432211110000000 0        


Q ss_pred             ---------------------cCCCCCCCC-hhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          754 ---------------------LDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       754 ---------------------ld~~~~~~p-~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                                           ........| ...+..+.+|+.+||..+|.+||++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  282 (308)
T cd06615         226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK  282 (308)
T ss_pred             ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH
Confidence                                 000000001 12356799999999999999999993

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.4e-34  Score=305.01  Aligned_cols=251  Identities=30%  Similarity=0.407  Sum_probs=196.9

Q ss_pred             hhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccC-------
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP-------  593 (888)
Q Consensus       524 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~-------  593 (888)
                      ...+++|.+.+.||.|+||.||+|...  +..|++|++..... ....+.+|+.+++++ +||||++++++|.       
T Consensus         2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            356789999999999999999999985  47899999875543 346789999999999 7999999999872       


Q ss_pred             -CceEEEEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       594 -~~~~LV~Ey~~ggsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                       +..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+   ++++|+||+|+||+++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCC
Confidence             23789999999999999885422 24578999999999999999999999   89999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD  746 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~  746 (888)
                      |++.........        .....|+..|+|||++..     ..++.++|||||||+||+|++|.+||...........
T Consensus       158 ~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  229 (275)
T cd06608         158 GVSAQLDSTLGR--------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFK  229 (275)
T ss_pred             ccceecccchhh--------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHH
Confidence            998765432211        123458999999999854     3467899999999999999999999975433222211


Q ss_pred             hcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          747 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       747 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..  ... .+ ....+...+..+.+|+.+||..||.+||++ .++
T Consensus       230 ~~--~~~-~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-~~l  269 (275)
T cd06608         230 IP--RNP-PP-TLKSPENWSKKFNDFISECLIKNYEQRPFM-EEL  269 (275)
T ss_pred             hh--ccC-CC-CCCchhhcCHHHHHHHHHHhhcChhhCcCH-HHH
Confidence            11  000 00 111122245689999999999999999999 444

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.2e-34  Score=319.34  Aligned_cols=244  Identities=20%  Similarity=0.311  Sum_probs=188.3

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--------C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------~  594 (888)
                      .++|.+...||.|+||.||+|...  +..||||.+.....  .....+.+|+.+|+.++||||+++++++.        .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            457889999999999999999875  57899999875422  22346778999999999999999998773        2


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..+++++++ +++|.+++.    ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~  165 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLA  165 (343)
T ss_pred             cEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccc
Confidence            468999988 789988773    2458999999999999999999999   89999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---  750 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---  750 (888)
                      .......           ....||+.|+|||++.+ ..++.++|||||||++|+|++|++||...............   
T Consensus       166 ~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  234 (343)
T cd07878         166 RQADDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT  234 (343)
T ss_pred             eecCCCc-----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence            7653211           22358999999999977 46899999999999999999999999755432211110000   


Q ss_pred             --------------ccccCCCCCCCC--------hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          751 --------------KNLLDPLAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       751 --------------~~~ld~~~~~~p--------~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                    ...+... ...+        ...+..+.+|+.+||..||.+||++ .++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~-~el  295 (343)
T cd07878         235 PSPEVLKKISSEHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISA-SEA  295 (343)
T ss_pred             CCHHHHHhcchhhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCH-HHH
Confidence                          0000000 0000        0123457899999999999999998 444

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-33  Score=306.44  Aligned_cols=254  Identities=24%  Similarity=0.396  Sum_probs=200.7

Q ss_pred             CCCCccceeeecCceEEEEEEECC------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeeccc-CCceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~LV  599 (888)
                      .+|.+.+.||+|+||.||+|.+..      ..||+|.+...... ....+.+|+.+++.++||||++++++| ....++|
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            467888999999999999998642      35899988755432 235688999999999999999999988 4578899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|.+++...  ...+++..++.++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++....
T Consensus        87 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          87 TQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             EecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            9999999999998533  3458999999999999999999999   8999999999999999999999999999987653


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....      ......++..|+|||.+....++.++|||||||++|++++ |++||................      .
T Consensus       162 ~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~  229 (279)
T cd05057         162 DEKEY------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE------R  229 (279)
T ss_pred             cccce------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC------C
Confidence            22110      0112234678999999988899999999999999999998 999997654332211111110      1


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      ...|...+..+.+++.+||..+|..||++ ..+++.|..+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~-~~l~~~l~~~~  269 (279)
T cd05057         230 LPQPPICTIDVYMVLVKCWMIDAESRPTF-KELINEFSKMA  269 (279)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHH
Confidence            11233345679999999999999999999 77878777653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.2e-34  Score=308.76  Aligned_cols=235  Identities=26%  Similarity=0.396  Sum_probs=183.9

Q ss_pred             eeeecCceEEEEEEECC---------eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~---------~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .||.|+||.||+|....         ..|++|.+........+.+.+|+.+++.++||||+++++++  .+..++||||+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   81 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV   81 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence            59999999999997642         34888887654434456788999999999999999999988  35788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc--------eeeecccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--------SKLSDFGISR  675 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~--------vKL~DFGla~  675 (888)
                      ++|+|..++...  ...+++..++.++.||+.||.|||+   +||+||||||+|||++.++.        ++++|||++.
T Consensus        82 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          82 KFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             CCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            999999998543  2368899999999999999999999   89999999999999987654        6899999876


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccc
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      .....            ....+++.|+|||++.+. .++.++|||||||++|+|++| .+||..............    
T Consensus       157 ~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~----  220 (258)
T cd05078         157 TVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED----  220 (258)
T ss_pred             ccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc----
Confidence            54321            123478899999999864 589999999999999999998 466654433221111110    


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                          ....|......+.+|+.+||+.+|.+||++ +++++.|
T Consensus       221 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il~~l  257 (258)
T cd05078         221 ----RHQLPAPKWTELANLINQCMDYEPDFRPSF-RAIIRDL  257 (258)
T ss_pred             ----cccCCCCCcHHHHHHHHHHhccChhhCCCH-HHHHHhc
Confidence                111233334679999999999999999999 6666655

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1e-33  Score=312.61  Aligned_cols=193  Identities=25%  Similarity=0.401  Sum_probs=156.9

Q ss_pred             ceeeecCceEEEEEEEC----CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc----CCceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~----~~~~~LV~Ey~~g  605 (888)
                      .+||+|+||.||+|...    +..||+|.+....  ....+.+|+.+|+.++||||+++++++    ....++||||+. 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            57999999999999864    2679999887543  234688999999999999999999987    346789999986 


Q ss_pred             CChhhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE----cCCCceeeecccccc
Q 002719          606 GSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFGISR  675 (888)
Q Consensus       606 gsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl----~~~~~vKL~DFGla~  675 (888)
                      ++|.+++...      .....+++..+..++.||+.||.|||+   ++|+||||||+|||+    +.++.+||+|||+++
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            4777766421      122358899999999999999999999   899999999999999    566799999999998


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGI  737 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~  737 (888)
                      .+.......     .......||+.|+|||++.+. .++.++|||||||++|+|+||++||..
T Consensus       161 ~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         161 LFNSPLKPL-----ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             ccCCCcccc-----cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            764432111     111234589999999999764 589999999999999999999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-33  Score=305.48  Aligned_cols=253  Identities=25%  Similarity=0.396  Sum_probs=197.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT  597 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~  597 (888)
                      .+|.....||.|+||.||+|...       ...|++|.+...... ....+.+|+.++++++||||+++++++.  +..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            46888899999999999999864       356999988654433 2457899999999999999999999985  4689


Q ss_pred             EEEEecCCCChhhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNS------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~------~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                      +||||+++|+|.+++......      ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            999999999999999644321      268999999999999999999999   89999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL  750 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~  750 (888)
                      |++.........       ......++..|+|||.+.+..++.++||||||+++|+|++ |..||............. .
T Consensus       162 ~~~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~-~  233 (275)
T cd05046         162 SLSKDVYNSEYY-------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ-A  233 (275)
T ss_pred             ccccccCccccc-------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH-c
Confidence            998754322111       1122346788999999988889999999999999999998 888986443322211111 0


Q ss_pred             ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ....    ...+...+..+.+++.+||..+|.+||++ .+++..|.
T Consensus       234 ~~~~----~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-~~~l~~l~  274 (275)
T cd05046         234 GKLE----LPVPEGCPSRLYKLMTRCWAVNPKDRPSF-SELVSALG  274 (275)
T ss_pred             CCcC----CCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHhc
Confidence            0100    01122345789999999999999999999 66766653

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.3e-33  Score=301.68  Aligned_cols=246  Identities=23%  Similarity=0.327  Sum_probs=197.0

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|+..+.||.|+||.||.+...  +..|++|.+....  ......+.+|+.++++++|+||+++++++.  +..++||||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5888899999999988887664  6789999886543  233456889999999999999999999883  467899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.+++.... ...+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence            99999999986432 3568999999999999999999999   8999999999999999999999999999886643321


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                              ......|++.|+|||.+.+..++.++||||||+++|+|++|..||.............  .....    ..+
T Consensus       157 --------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~--~~~~~----~~~  222 (256)
T cd08221         157 --------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV--QGNYT----PVV  222 (256)
T ss_pred             --------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCC----CCc
Confidence                    1123458999999999988889999999999999999999999997654433221111  11111    112


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                      ...+..+.+++.+||..+|.+||++ +++++
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~R~s~-~~ll~  252 (256)
T cd08221         223 SVYSSELISLVHSLLQQDPEKRPTA-DEVLD  252 (256)
T ss_pred             cccCHHHHHHHHHHcccCcccCCCH-HHHhh
Confidence            3345779999999999999999999 55543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.9e-33  Score=302.71  Aligned_cols=246  Identities=26%  Similarity=0.407  Sum_probs=193.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhHHHHHHHHHHhcCCCCeeeeecccC----Cce
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP----EVW  596 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~  596 (888)
                      .+|...+.||+|+||.||+|...  +..|++|.+......     ....+.+|+.+++.++||||+++++++.    ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            47889999999999999999874  578999988654321     1245888999999999999999999873    357


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      +++|||+++++|.+++..   ...+++..++.++.|++.||.|||+   .+|+||||+|+||+++.++.+||+|||++..
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            899999999999999843   3458899999999999999999999   8999999999999999999999999999876


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      .........     ......++..|+|||++.+..++.++|||||||++|+|++|++||.............     ..+
T Consensus       156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~-----~~~  225 (266)
T cd06651         156 LQTICMSGT-----GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA-----TQP  225 (266)
T ss_pred             cccccccCC-----ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh-----cCC
Confidence            532211111     0122347899999999998889999999999999999999999997554332222111     111


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .....|...+..+..++ .||..+|.+||++ +++
T Consensus       226 ~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~-~ei  258 (266)
T cd06651         226 TNPQLPSHISEHARDFL-GCIFVEARHRPSA-EEL  258 (266)
T ss_pred             CCCCCchhcCHHHHHHH-HHhcCChhhCcCH-HHH
Confidence            12233444556788888 7888999999999 444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.5e-33  Score=305.60  Aligned_cols=241  Identities=27%  Similarity=0.395  Sum_probs=195.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      .|+..+.||.|+||.||+|.+.  +..||||++..... .....+.+|+.+++.++||||+++++++.  ...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            5777888999999999999875  57899999875432 23456889999999999999999999884  5789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++..    .++++..+..++.+++.||.|||+   ++++|+||+|+||+++.++.++|+|||++..+..... 
T Consensus        85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06640          85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence            99999998842    358889999999999999999999   8999999999999999999999999999876543221 


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                             ......++..|+|||++.+..++.++|||||||++|+|+||.+||............      ........+.
T Consensus       157 -------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------~~~~~~~~~~  223 (277)
T cd06640         157 -------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI------PKNNPPTLTG  223 (277)
T ss_pred             -------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh------hcCCCCCCch
Confidence                   112235788999999999888999999999999999999999999754432211111      0011122344


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..+..+.+++.+||+.+|.+||++ .++
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~-~~i  250 (277)
T cd06640         224 EFSKPFKEFIDACLNKDPSFRPTA-KEL  250 (277)
T ss_pred             hhhHHHHHHHHHHcccCcccCcCH-HHH
Confidence            566789999999999999999999 444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-34  Score=323.35  Aligned_cols=231  Identities=25%  Similarity=0.316  Sum_probs=180.5

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhc---CCCCeeeeeccc--CCceEEEEEecCC
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKI---RHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l---~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      ||+|+||+||+|...  +..||||++......   ....+..|..++..+   +||||+++++++  .+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999875  688999998653221   123455677777665   699999999987  4568999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.+++..   ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.........  
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--  152 (330)
T cd05586          81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--  152 (330)
T ss_pred             ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--
Confidence            999998843   3568999999999999999999999   89999999999999999999999999998753322111  


Q ss_pred             CccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC-h
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-F  763 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p-~  763 (888)
                            .....||+.|+|||++.+. .++.++|||||||+||+|+||+.||............. ....      .++ .
T Consensus       153 ------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~-~~~~------~~~~~  219 (330)
T cd05586         153 ------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA-FGKV------RFPKN  219 (330)
T ss_pred             ------ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH-cCCC------CCCCc
Confidence                  1234589999999999765 58999999999999999999999997654332211110 0000      011 1


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..+..+.+|+.+||..||.+||+.
T Consensus       220 ~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         220 VLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             cCCHHHHHHHHHHcCCCHHHCCCC
Confidence            235778999999999999999964

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-33  Score=300.40  Aligned_cols=244  Identities=29%  Similarity=0.460  Sum_probs=193.2

Q ss_pred             eeeecCceEEEEEEEC-CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCChhh
Q 002719          535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED  610 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~  610 (888)
                      +||.|+||.||++.+. ++.|++|.+...... ....+.+|++++++++||||+++++++.  ...++||||+++++|.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            6999999999999876 688999988765433 3457899999999999999999999884  46889999999999999


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC  690 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~  690 (888)
                      ++...  ...+++..+..++.+++.||.|||+   ++++||||||+|||++.++.+||+|||++...........     
T Consensus        82 ~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-----  151 (251)
T cd05041          82 FLRKK--KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS-----  151 (251)
T ss_pred             HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-----
Confidence            98543  2357889999999999999999999   8999999999999999999999999999876542211111     


Q ss_pred             ccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 002719          691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL  769 (888)
Q Consensus       691 ~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l  769 (888)
                       .....++..|+|||.+.++.++.++|||||||++|+|+| |..||...............      .....+...+..+
T Consensus       152 -~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  224 (251)
T cd05041         152 -DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG------YRMPAPQLCPEEI  224 (251)
T ss_pred             -cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC------CCCCCCccCCHHH
Confidence             011224667999999988899999999999999999999 88898655432221111100      0111233456789


Q ss_pred             HHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          770 ANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       770 ~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      .+++.+||..+|.+||++ .+|++.|+
T Consensus       225 ~~li~~~l~~~p~~Rp~~-~ell~~l~  250 (251)
T cd05041         225 YRLMLQCWAYDPENRPSF-SEIYNELQ  250 (251)
T ss_pred             HHHHHHHhccChhhCcCH-HHHHHHhh
Confidence            999999999999999999 77766654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.9e-34  Score=311.88  Aligned_cols=243  Identities=23%  Similarity=0.324  Sum_probs=193.1

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .|.....||.|+||.||++...  +..||||.+........+.+.+|+.+++.++||||+++++.+  .+..++||||++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~  102 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE  102 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence            3445567999999999999874  678999998765444456788999999999999999999987  457899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.    ...+++..++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||++......... 
T Consensus       103 ~~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-  174 (292)
T cd06658         103 GGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-  174 (292)
T ss_pred             CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-
Confidence            999999883    2358899999999999999999999   89999999999999999999999999998755332111 


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                             .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||............   ...+.+... ....
T Consensus       175 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~-~~~~  243 (292)
T cd06658         175 -------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI---RDNLPPRVK-DSHK  243 (292)
T ss_pred             -------CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhcCCCccc-cccc
Confidence                   12234889999999998888999999999999999999999999765443221111   111111111 1123


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      .+..+.+++.+||..+|.+||++.+.
T Consensus       244 ~~~~~~~li~~~l~~~P~~Rpt~~~i  269 (292)
T cd06658         244 VSSVLRGFLDLMLVREPSQRATAQEL  269 (292)
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHH
Confidence            45679999999999999999999433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1e-33  Score=307.37  Aligned_cols=254  Identities=27%  Similarity=0.379  Sum_probs=198.5

Q ss_pred             ChhhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeeccc---
Q 002719          519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC---  592 (888)
Q Consensus       519 ~~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~---  592 (888)
                      ++.++....+.|++...||.|+||.||+|.+.  +..||+|++.... .....+..|+.++.++ +||||+++++++   
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            45566667789999999999999999999885  5789999986543 2345688999999998 799999999987   


Q ss_pred             -----CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCcee
Q 002719          593 -----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK  667 (888)
Q Consensus       593 -----~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vK  667 (888)
                           .+..+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+   ++|+|+||+|+||+++.++.++
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~  161 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK  161 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence                 235789999999999999885432 3458888899999999999999999   8999999999999999999999


Q ss_pred             eeccccccccccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 002719          668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ  742 (888)
Q Consensus       668 L~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~  742 (888)
                      |+|||++.........        .....|++.|+|||.+.     ...++.++|||||||++|+|++|.+||.......
T Consensus       162 l~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~  233 (282)
T cd06636         162 LVDFGVSAQLDRTVGR--------RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR  233 (282)
T ss_pred             EeeCcchhhhhccccC--------CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh
Confidence            9999998765322110        12345899999999986     3467889999999999999999999996544322


Q ss_pred             HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          743 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       743 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .......   ...+  ...+...+..+.+|+.+||..||.+||++ .++
T Consensus       234 ~~~~~~~---~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~el  276 (282)
T cd06636         234 ALFLIPR---NPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPST-EQL  276 (282)
T ss_pred             hhhhHhh---CCCC--CCcccccCHHHHHHHHHHhCCChhhCcCH-HHH
Confidence            2211111   0000  01112345789999999999999999998 444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-35  Score=321.01  Aligned_cols=237  Identities=28%  Similarity=0.391  Sum_probs=193.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      -|..++.||.|+||.||.+.+.  ...||||.+.....+.   ...+.+|+..|.+++|||+|.+-|+|  ....+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            4777888999999999999875  4779999987655444   45789999999999999999999998  446789999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      ||- |+-.|+|.-  ..+++-+-++..|+.+.+.||.|||+   ++.||||||..||||++.|.|||+|||.|...... 
T Consensus       107 YCl-GSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-  179 (948)
T KOG0577|consen  107 YCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-  179 (948)
T ss_pred             HHh-ccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence            994 677777742  24678899999999999999999999   89999999999999999999999999988765432 


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                                 ..++|||+|||||++.   .|.|+-++|||||||+..||.-.+||+-..+.....+....-.   .|..
T Consensus       180 -----------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe---sPtL  245 (948)
T KOG0577|consen  180 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---SPTL  245 (948)
T ss_pred             -----------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC---CCCC
Confidence                       3467999999999885   4789999999999999999999999986655544333221111   1111


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .  ....+..+.+++..||++-|.+||+..
T Consensus       246 q--s~eWS~~F~~Fvd~CLqKipqeRptse  273 (948)
T KOG0577|consen  246 Q--SNEWSDYFRNFVDSCLQKIPQERPTSE  273 (948)
T ss_pred             C--CchhHHHHHHHHHHHHhhCcccCCcHH
Confidence            1  233457899999999999999999973

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.1e-34  Score=309.84  Aligned_cols=251  Identities=25%  Similarity=0.375  Sum_probs=195.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ++|.+.+.||+|+||+||++...  +..||+|++..... .....+.+|+++++.++||||+++++++  ....++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            46788889999999999999876  67899998865432 2346789999999999999999999998  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++..   ...+++..+..++.+++.||.|||+.  ++++||||+|+||+++.++.++|+|||++....... 
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-  158 (284)
T cd06620          85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-  158 (284)
T ss_pred             CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence            999999998843   34689999999999999999999973  479999999999999999999999999986543211 


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH----HH-hhcccccccCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY----AL-DTGKLKNLLDPL  757 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~----~~-~~~~~~~~ld~~  757 (888)
                               .....|+..|+|||++.+..++.++|||||||++|+|+||+.||........    .. ....+.......
T Consensus       159 ---------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd06620         159 ---------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP  229 (284)
T ss_pred             ---------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc
Confidence                     1123589999999999888999999999999999999999999975432100    00 000011111111


Q ss_pred             CCCCCh-hhHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q 002719          758 AGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRV  794 (888)
Q Consensus       758 ~~~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~  794 (888)
                      ....+. ..+..+.+|+.+||+.||.+||++ +++++.
T Consensus       230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-~e~~~~  266 (284)
T cd06620         230 PPRLPSSDFPEDLRDFVDACLLKDPTERPTP-QQLCAM  266 (284)
T ss_pred             CCCCCchhcCHHHHHHHHHHhcCCcccCcCH-HHHhcC
Confidence            111111 245679999999999999999999 666544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.8e-33  Score=305.50  Aligned_cols=247  Identities=28%  Similarity=0.362  Sum_probs=191.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      ++|+....||+|+||.||+|.+.  +..||+|++.....  .....+.+|+.+++.++||||+++++++  ....++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            36888899999999999999886  57899998865422  2235688999999999999999999988  346889999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++++|..++.   ....+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          81 YCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             ccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            999998888763   23458999999999999999999999   899999999999999999999999999998764432


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-cccc------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-LKNL------  753 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-~~~~------  753 (888)
                      ..        .....++..|+|||.+.+ ..++.++|||||||++|+|++|.+||.............. ....      
T Consensus       155 ~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (286)
T cd07847         155 DD--------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ  226 (286)
T ss_pred             cc--------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence            11        112347889999999876 4578999999999999999999999976544322211100 0000      


Q ss_pred             -----------cCCCCC-CC-----ChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          754 -----------LDPLAG-DW-----PFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       754 -----------ld~~~~-~~-----p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                                 ..+... ..     ....+..+.+|+.+||+.+|.+||++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  278 (286)
T cd07847         227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCE  278 (286)
T ss_pred             hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHH
Confidence                       000000 00     012346789999999999999999994

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-35  Score=332.81  Aligned_cols=253  Identities=28%  Similarity=0.458  Sum_probs=208.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--C---eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~---~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ...+.+.||.|.||.||+|.++  +   ..||||.++.... ....+|+.|+.||.+++||||++|-|+..  ...+||.
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            3456788999999999999876  3   5699999987543 33567999999999999999999999873  4678999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      |||++|+|+.+|+.++  ..|++.+...++..|+.|++||-+   .++|||||...|||++.|..+|++|||+++.+.++
T Consensus       710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence            9999999999997665  459999999999999999999999   89999999999999999999999999999977654


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHhhcccccccCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITK--EVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~ld~~  757 (888)
                      . .....    .....-..+|.|||.+...++|.+||||||||++||.++ |..||....  ++..+++.+.        
T Consensus       785 ~-~~~yt----t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy--------  851 (996)
T KOG0196|consen  785 P-EAAYT----TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY--------  851 (996)
T ss_pred             C-Ccccc----ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc--------
Confidence            3 11111    122334679999999999999999999999999999876 888876433  3344444432        


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      .-.-|..++..|.+|+..||++|...||.+ ..|+..|+++-.
T Consensus       852 RLPpPmDCP~aL~qLMldCWqkdR~~RP~F-~qiV~~lDklIr  893 (996)
T KOG0196|consen  852 RLPPPMDCPAALYQLMLDCWQKDRNRRPKF-AQIVSTLDKLIR  893 (996)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhhcCCCH-HHHHHHHHHHhc
Confidence            122366778999999999999999999999 677788877654

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.9e-33  Score=299.62  Aligned_cols=247  Identities=31%  Similarity=0.503  Sum_probs=196.3

Q ss_pred             CCccceeeecCceEEEEEEECC------eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      |.+...||.|+||.||++.+..      ..||+|.+...... ....+..|+.++..++||||+++++++.  ...+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            3456789999999999998875      77999999765433 4568999999999999999999999884  4788999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++++|.+++..... ..+++..++.++.|++.||.|||+   ++++|+||||+||+++.++.++|+|||++......
T Consensus        81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence            99999999999853321 128999999999999999999999   89999999999999999999999999999876543


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      .....       ....+++.|+|||.+.+..++.++||||||+++|+|++ |.+||.................      .
T Consensus       157 ~~~~~-------~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~------~  223 (258)
T smart00219      157 DYYKK-------KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR------L  223 (258)
T ss_pred             ccccc-------ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC------C
Confidence            21111       12237889999999988889999999999999999998 8899975443322211111111      1


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV  794 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~  794 (888)
                      ..+...+..+.+++.+||..+|.+||++ .++++.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~-~~ll~~  257 (258)
T smart00219      224 PKPENCPPEIYKLMLQCWAEDPEDRPTF-SELVEI  257 (258)
T ss_pred             CCCCcCCHHHHHHHHHHCcCChhhCcCH-HHHHhh
Confidence            1222356789999999999999999999 555543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-34  Score=294.32  Aligned_cols=245  Identities=27%  Similarity=0.443  Sum_probs=197.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC----Ch----hHHHHHHHHHHhc-CCCCeeeeecccC--
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ----GP----SEFQQEIDILSKI-RHPNLVTLVGACP--  593 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~----~~----~~~~~Ei~iL~~l-~HpnIv~l~g~~~--  593 (888)
                      ...|.....||+|+.+.|.++..+  +..+|+|++......    ..    +.-.+|+.||+++ .||||+++.+++.  
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            345777788999999999988765  578999988654221    12    2345799999998 5999999999985  


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ..+++|+|.|+.|.|.|+|.   ....+++....+|+.|+..|+.|||.   ++||||||||+|||++++..+||+|||+
T Consensus        96 sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             chhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccce
Confidence            36779999999999999994   44569999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--H
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--L  745 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~  745 (888)
                      ++.+......         ....|||+|+|||.+..      ..|+...|+|++|||+|.|+.|.|||.........  +
T Consensus       170 a~~l~~GekL---------relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~I  240 (411)
T KOG0599|consen  170 ACQLEPGEKL---------RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMI  240 (411)
T ss_pred             eeccCCchhH---------HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Confidence            9988765422         23459999999998853      36888999999999999999999999766554332  2


Q ss_pred             hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ..|++    .-..++|. ..+....+||.+||+.||.+|.+..+.+
T Consensus       241 meGky----qF~speWa-dis~~~KdLIsrlLqVdp~~Ritake~L  281 (411)
T KOG0599|consen  241 MEGKY----QFRSPEWA-DISATVKDLISRLLQVDPTKRITAKEAL  281 (411)
T ss_pred             Hhccc----ccCCcchh-hccccHHHHHHHHHeeCchhcccHHHHh
Confidence            23322    22233443 4456799999999999999999985443

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.1e-33  Score=302.11  Aligned_cols=246  Identities=24%  Similarity=0.369  Sum_probs=194.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhHHHHHHHHHHhcCCCCeeeeecccCC----ce
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACPE----VW  596 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----~~  596 (888)
                      .+|.+.+.||+|+||.||+|...  +..||||.+......     ....+.+|+.+++.++||||+++++++.+    .+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            47888999999999999999875  578999988643211     12467889999999999999999998743    47


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||+++++|.+++...   ..+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.++|+|||++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            7999999999999998532   457888999999999999999999   8999999999999999999999999999886


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      .........     ......|+..|+|||.+.+..++.++|||||||++|+|++|++||............ .    ..+
T Consensus       156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~----~~~  225 (265)
T cd06652         156 LQTICLSGT-----GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI-A----TQP  225 (265)
T ss_pred             ccccccccc-----ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH-h----cCC
Confidence            543211111     012234889999999998888999999999999999999999999755433222111 1    111


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .....|...+..+.+++.+||. +|.+||++ +++
T Consensus       226 ~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~-~~i  258 (265)
T cd06652         226 TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSA-DEL  258 (265)
T ss_pred             CCCCCchhhCHHHHHHHHHHhc-ChhhCCCH-HHH
Confidence            2223455556788999999995 99999998 444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-35  Score=303.98  Aligned_cols=242  Identities=26%  Similarity=0.374  Sum_probs=200.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      -|++..+||+|+||.||+++++  |..||||.+...  .+..++.+|+.+|++++.|++|++||.+  ...+++|||||-
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            4888999999999999999886  688999988654  4567899999999999999999999976  446899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      .|++.++++.  ++++|+++++..++...+.||.|||.   ..-||||||..||||+.+|++||+|||.|..+....   
T Consensus       112 AGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---  183 (502)
T KOG0574|consen  112 AGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---  183 (502)
T ss_pred             CCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH---
Confidence            9999999953  45789999999999999999999999   668999999999999999999999999998665432   


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                           ..++...||+.|||||++..-.|+.++||||||++..||..|+|||.........+-    ...-+|.--.-|..
T Consensus       184 -----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM----IPT~PPPTF~KPE~  254 (502)
T KOG0574|consen  184 -----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM----IPTKPPPTFKKPEE  254 (502)
T ss_pred             -----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe----ccCCCCCCCCChHh
Confidence                 223455799999999999999999999999999999999999999965443321100    00011111122455


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .+..+.++++.||-++|++|-++.+
T Consensus       255 WS~~F~DFi~~CLiK~PE~R~TA~~  279 (502)
T KOG0574|consen  255 WSSEFNDFIRSCLIKKPEERKTALR  279 (502)
T ss_pred             hhhHHHHHHHHHhcCCHHHHHHHHH
Confidence            6778999999999999999988743

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.4e-33  Score=299.92  Aligned_cols=249  Identities=25%  Similarity=0.379  Sum_probs=197.2

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC----CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~LV~  600 (888)
                      +|++.+.||.|+||.||++...  +..||+|.+......  ....+..|+.+++.++||||+++++++.    ...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4778889999999999999875  578999998754322  2346888999999999999999998762    3578999


Q ss_pred             EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      ||+++++|.+++... ....++++..++.++.+|+.||.|||...  ..+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998543 23457899999999999999999999221  188999999999999999999999999999876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      ......        .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||............      ....
T Consensus       161 ~~~~~~--------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~------~~~~  226 (265)
T cd08217         161 GHDSSF--------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI------KEGK  226 (265)
T ss_pred             cCCccc--------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH------hcCC
Confidence            543210        12235899999999999888999999999999999999999999765432211111      1111


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ....+...+..+.+++.+||..+|.+||++ ++|+
T Consensus       227 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~-~~il  260 (265)
T cd08217         227 FRRIPYRYSSELNEVIKSMLNVDPDKRPST-EELL  260 (265)
T ss_pred             CCCCccccCHHHHHHHHHHccCCcccCCCH-HHHh
Confidence            122344456789999999999999999999 4443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.9e-33  Score=312.84  Aligned_cols=254  Identities=18%  Similarity=0.238  Sum_probs=187.5

Q ss_pred             ccceeeec--CceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          532 PSLKIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       532 ~~~~LG~G--~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +..+||+|  +||+||++...  +..||+|.+.......  ...+.+|+.+++.++||||++++++|  .+..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            34679999  78999999876  5789999987643222  34577899999999999999999988  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++.... ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.++++|||.+.........
T Consensus        82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999985432 2358999999999999999999999   89999999999999999999999999876543221111


Q ss_pred             CCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCC---
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDP---  756 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~~~ld~---  756 (888)
                      ... .........++..|+|||++.+  ..++.++|||||||++|+|++|+.||...........  .+.....++.   
T Consensus       158 ~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (327)
T cd08227         158 LRV-VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI  236 (327)
T ss_pred             ccc-cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence            000 0001122347788999999976  4689999999999999999999999975433221111  1111100000   


Q ss_pred             ----------------------------------CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          757 ----------------------------------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       757 ----------------------------------~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                                        ....+....+..+.+|+.+||+.||.+||++ +++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~el  304 (327)
T cd08227         237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA-STL  304 (327)
T ss_pred             hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH-HHH
Confidence                                              0000111234678999999999999999999 444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.3e-33  Score=299.42  Aligned_cols=241  Identities=27%  Similarity=0.428  Sum_probs=195.2

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      +|...+.||+|+||.||+|...  +..|++|.+......     ....+.+|+.+++.++||||+++++++.  ...++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667788999999999999885  688999998654321     2356889999999999999999999884  468899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++++|.+++..   ...+++..+..++.|++.||.|||+   .|++|+||+|+||+++.++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            999999999999843   3458899999999999999999999   8999999999999999999999999999876543


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      ...         .....|+..|++||.+.... ++.++|+|||||++|+|++|++||.................     .
T Consensus       155 ~~~---------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~  220 (258)
T cd06632         155 FSF---------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----L  220 (258)
T ss_pred             ccc---------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----C
Confidence            220         12345889999999997776 89999999999999999999999976554333333222111     1


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...+...+..+.+++.+||..+|.+||++.+
T Consensus       221 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  251 (258)
T cd06632         221 PPIPDHLSDEAKDFILKCLQRDPSLRPTAAE  251 (258)
T ss_pred             CCcCCCcCHHHHHHHHHHhhcCcccCcCHHH
Confidence            1223344578999999999999999999943

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.4e-33  Score=302.65  Aligned_cols=249  Identities=25%  Similarity=0.407  Sum_probs=192.9

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC----------hhHHHHHHHHHHhcCCCCeeeeeccc--CC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG----------PSEFQQEIDILSKIRHPNLVTLVGAC--PE  594 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~----------~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~  594 (888)
                      +|...+.||.|+||.||+|...  +..||+|.+.......          .+.+.+|+.+++.++||||+++++++  .+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4667788999999999999764  6789999886421111          13578899999999999999999988  45


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..++||||+++++|.+++...   ..+++..+..++.|++.||.|||+   ++++||||+|+||+++.++.++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccc
Confidence            788999999999999998533   568999999999999999999999   89999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN  752 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~  752 (888)
                      ..........      ......|+..|+|||.+....  ++.++||||||+++|+|++|..||................ 
T Consensus       156 ~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-  228 (272)
T cd06629         156 KKSDDIYDND------QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR-  228 (272)
T ss_pred             cccccccccc------ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc-
Confidence            7653321111      112345889999999987654  8899999999999999999999997554433222211110 


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .............+..+.+++.+||..+|.+||++ +++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~i  266 (272)
T cd06629         229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTA-REL  266 (272)
T ss_pred             cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCH-HHH
Confidence            00111111222345789999999999999999998 444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.2e-33  Score=309.00  Aligned_cols=250  Identities=23%  Similarity=0.270  Sum_probs=192.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++|...+.||+|+||.||++...  +..|++|.+.....   .....+.+|+.+++.++||||+++++.+.  +..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36888999999999999999876  47899999876532   22346789999999999999999999883  4678999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++|++|.+++..   ...+++..+..++.|++.||.|||+   ++++||||||.||+++.++.+||+|||+++.....
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            99999999999943   3468999999999999999999999   89999999999999999999999999998742111


Q ss_pred             cccC-------CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 002719          681 EISS-------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       681 ~~~~-------~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      ....       ............|+..|+|||.+.+..++.++|||||||++|+|++|..||............ .....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~-~~~~~  233 (305)
T cd05609         155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV-ISDDI  233 (305)
T ss_pred             ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hhccc
Confidence            1000       000001112235788999999998889999999999999999999999999754432211111 11111


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..+.   .+...+..+.+++.+||+.+|.+||+.
T Consensus       234 ~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~  264 (305)
T cd05609         234 EWPE---GDEALPADAQDLISRLLRQNPLERLGT  264 (305)
T ss_pred             CCCC---ccccCCHHHHHHHHHHhccChhhccCc
Confidence            1111   111345779999999999999999996

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.8e-33  Score=300.21  Aligned_cols=254  Identities=25%  Similarity=0.338  Sum_probs=199.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ++|++.+.||.|+||+||+|...  +..+++|++..... .....+.+|+.+|+.++||||+++++.+  .+..++||||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            36889999999999999999874  57899999875432 2456789999999999999999999987  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++........+++..+..++.|++.||.|||+   +|++||||+|+||++++++.++|+|||++..+.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            9999999999654333568999999999999999999999   8999999999999999999999999999987654332


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ...    .......|+..|+|||++... .++.++|+|||||++|+|++|+.||.............  ...........
T Consensus       158 ~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~  231 (267)
T cd06610         158 RTR----KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL--QNDPPSLETGA  231 (267)
T ss_pred             ccc----cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh--cCCCCCcCCcc
Confidence            210    011233589999999999877 78999999999999999999999997554332211111  11000111100


Q ss_pred             -ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          762 -PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       762 -p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                       ....+..+.+++.+||..||.+||++ +++
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~l  261 (267)
T cd06610         232 DYKKYSKSFRKMISLCLQKDPSKRPTA-EEL  261 (267)
T ss_pred             ccccccHHHHHHHHHHcCCChhhCcCH-HHH
Confidence             12345789999999999999999998 444

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.2e-33  Score=307.12  Aligned_cols=248  Identities=26%  Similarity=0.357  Sum_probs=192.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      ++|...++||+|+||.||+|.+.  ++.||+|.+......  ..+.+.+|+++++.++||||++++++|.  ...++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            36888899999999999999985  578999988654322  2456889999999999999999999984  46899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++++|..+...   ...+++..++.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++..+....
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            9999999887632   2348999999999999999999999   899999999999999999999999999987654322


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc--------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN--------  752 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~--------  752 (888)
                      ..        .....++..|+|||++.+. .++.++|||||||++|+|++|++||.................        
T Consensus       155 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (286)
T cd07846         155 EV--------YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE  226 (286)
T ss_pred             cc--------cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence            11        1223578999999998753 578899999999999999999999975543321111110000        


Q ss_pred             ----------ccCCCCC------CCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          753 ----------LLDPLAG------DWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       753 ----------~ld~~~~------~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                ...+...      ......+..+.+|+.+||..+|.+||++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~  279 (286)
T cd07846         227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ  279 (286)
T ss_pred             HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHH
Confidence                      0000000      001123567999999999999999999943

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=2.7e-33  Score=302.22  Aligned_cols=247  Identities=23%  Similarity=0.392  Sum_probs=183.8

Q ss_pred             eeeecCceEEEEEEECC----eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCC
Q 002719          535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS  607 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggs  607 (888)
                      .||+|+||.||+|...+    ..+++|.+..... .....+.+|+.+++.++||||+++++.|.  ...++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            59999999999996532    3466777665432 23467999999999999999999999884  46799999999999


Q ss_pred             hhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          608 LEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       608 L~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      |.+++.... ....+++..+..++.||+.||.|||+   ++++||||||+|||++.++.+||+|||++..........  
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~--  156 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE--  156 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhh--
Confidence            999996432 23456777888999999999999999   899999999999999999999999999876432211100  


Q ss_pred             ccccccCCCCCCcccCChhhhcc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHh--hcccccccCC
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLAS-------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD--TGKLKNLLDP  756 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~--~~~~~~~ld~  756 (888)
                          ......|+..|+|||++..       ..++.++|||||||++|+|++ |.+||...........  .+......+ 
T Consensus       157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-  231 (268)
T cd05086         157 ----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK-  231 (268)
T ss_pred             ----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC-
Confidence                1123347889999998853       245789999999999999997 5778865443221111  111112222 


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                        ...+...+..+.+++..|| .+|.+||++ ++|++.|
T Consensus       232 --~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~-~~i~~~l  266 (268)
T cd05086         232 --PQLELPYSERWYEVLQFCW-LSPEKRATA-EEVHRLL  266 (268)
T ss_pred             --CccCCCCcHHHHHHHHHHh-hCcccCCCH-HHHHHHh
Confidence              2223335577899999999 689999999 6666655

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.8e-33  Score=302.06  Aligned_cols=253  Identities=24%  Similarity=0.397  Sum_probs=195.7

Q ss_pred             CCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccCC--------
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE--------  594 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--------  594 (888)
                      |.+.+.||+|+||.||+|.+.     +..||||++......  ..+.+.+|+.+++.++||||+++++++..        
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            556778999999999999864     467999998764322  24568899999999999999999997621        


Q ss_pred             ceEEEEEecCCCChhhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                      ..+++++|+.+|+|.+++...   .....+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            247899999999999887432   122357889999999999999999999   89999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL  750 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~  750 (888)
                      |+++..........      .....+++.|++||.+....++.++|||||||++|+|++ |++||...............
T Consensus       158 g~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05074         158 GLSKKIYSGDYYRQ------GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG  231 (273)
T ss_pred             cccccccCCcceec------CCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence            99886543221111      112235678999999998899999999999999999999 89999755443221111110


Q ss_pred             ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..      ...+...+..+.+++.+||+.+|.+||++ .+++..|+.+
T Consensus       232 ~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~-~~~~~~l~~~  272 (273)
T cd05074         232 NR------LKQPPDCLEDVYELMCQCWSPEPKCRPSF-QHLRDQLELI  272 (273)
T ss_pred             Cc------CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence            00      11122345789999999999999999999 7888877654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.3e-33  Score=307.22  Aligned_cols=246  Identities=26%  Similarity=0.388  Sum_probs=197.2

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      .++|.+.+.||.|+||.||+|...  +..|++|.+..........+.+|+.+++.++||||++++++|  .+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            357889999999999999999864  578999998755444456789999999999999999999988  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++..    ..+++..+..++.+++.||.|||+   +|++|+||+|+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            999999999842    347889999999999999999999   8999999999999999999999999998876543221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||.+..+.++.++|||||||++|+|++|++||................   .+. ...+
T Consensus       171 ~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~---~~~-~~~~  238 (293)
T cd06647         171 K--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG---TPE-LQNP  238 (293)
T ss_pred             c--------cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC---CCC-CCCc
Confidence            1        122358899999999988889999999999999999999999997654332211111000   000 0112


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...+..+.+++.+||..+|.+||++.+.+
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il  267 (293)
T cd06647         239 EKLSAIFRDFLNRCLEMDVEKRGSAKELL  267 (293)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            23456799999999999999999994433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.4e-33  Score=304.10  Aligned_cols=247  Identities=26%  Similarity=0.405  Sum_probs=200.0

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ..+++|.....||.|+||.||+|.+.  +..|++|++..... ....+.+|+++++.++||||+++++++  .+..++|+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            45567888899999999999999987  68899999976544 456788999999999999999999987  46789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++++|.+++....  ..+++..++.++.+++.||.|||+   +|++|+||+|+||+++.++.++|+|||++......
T Consensus        95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  169 (286)
T cd06614          95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE  169 (286)
T ss_pred             eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence            9999999999996432  379999999999999999999999   89999999999999999999999999988755432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...        .....++..|++||++.+..++.++|||||||++|+|++|..||..............  ......  .
T Consensus       170 ~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~--~  237 (286)
T cd06614         170 KSK--------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGIPPL--K  237 (286)
T ss_pred             hhh--------hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCCC--c
Confidence            211        1223478899999999888899999999999999999999999976554432222111  111111  1


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .+...+..+.+++.+||+.+|.+||++.+
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  266 (286)
T cd06614         238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEE  266 (286)
T ss_pred             chhhCCHHHHHHHHHHhccChhhCcCHHH
Confidence            11224578999999999999999999943

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.2e-33  Score=303.12  Aligned_cols=248  Identities=27%  Similarity=0.346  Sum_probs=193.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC----CceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~LV~  600 (888)
                      ++|...+.||.|++|.||++.+.  ++.||+|.+..... .....+.+|+++++.++||||++++++|.    ...++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36788899999999999999985  58899999875433 23456899999999999999999999873    2578999


Q ss_pred             EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ||+++++|.+++... .....+++..+..++.|++.||.|||+   .+++|+||+|.||+++.++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            999999999887532 234568899999999999999999999   8999999999999999999999999999875432


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHH--Hhhccccc
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQYA--LDTGKLKN  752 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-----~~~~--~~~~~~~~  752 (888)
                      ...          ....++..|+|||.+.+..++.++|||||||++|+|++|..||.....     ....  ........
T Consensus       158 ~~~----------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd06621         158 SLA----------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE  227 (287)
T ss_pred             ccc----------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchh
Confidence            211          123478899999999988999999999999999999999999975521     1111  01100000


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      +....  ......+..+.+++.+||..+|.+||++ .++
T Consensus       228 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~ei  263 (287)
T cd06621         228 LKDEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTP-WDM  263 (287)
T ss_pred             hccCC--CCCCchHHHHHHHHHHHcCCCcccCCCH-HHH
Confidence            00000  0001235789999999999999999999 444

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.9e-33  Score=302.18  Aligned_cols=246  Identities=23%  Similarity=0.407  Sum_probs=194.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC------ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~L  598 (888)
                      +|+....||+|+||.||+|...  +..||+|.+......      ....+.+|+.+|+.++||||+++++++.  +..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4778889999999999999864  578999998754321      1346889999999999999999999984  46889


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-ceeeecccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFL  677 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~  677 (888)
                      ||||+++++|.+++..   ..++++..+..++.|++.||.|||+   +|++|+||+|.||+++.++ .+||+|||++..+
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999999853   3468899999999999999999999   8999999999999998765 6999999998876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHHhhccccccc
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV---QYALDTGKLKNLL  754 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~---~~~~~~~~~~~~l  754 (888)
                      .........    ......|+..|+|||.+.+..++.++||||||+++|+|++|..||......   ........     
T Consensus       155 ~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----  225 (268)
T cd06630         155 AAKGTGAGE----FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-----  225 (268)
T ss_pred             ccccccCCc----cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-----
Confidence            543211111    112345889999999998888999999999999999999999999643321   11111100     


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .......+...+..+.+++.+||..+|.+||++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  260 (268)
T cd06630         226 ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRE  260 (268)
T ss_pred             cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHH
Confidence            01112344456678999999999999999999943

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.5e-33  Score=299.42  Aligned_cols=244  Identities=23%  Similarity=0.354  Sum_probs=195.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|+..+.||+|+||.||++...  +..||+|.+.....  .....+.+|+.++++++||||+++++++.  +..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4788899999999999999875  57899999875322  23457899999999999999999999884  478899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++.... ...+++..++.++.|++.||.|||+   ++++|+||+|+|||++.++.++|+|||++........
T Consensus        81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            99999999885322 2357899999999999999999999   8999999999999999999999999999876543221


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....|++.|+|||++.+..++.++|+|||||++|+|++|..||............  ....    ....+
T Consensus       157 ~--------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~--~~~~----~~~~~  222 (256)
T cd08218         157 L--------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI--IRGS----YPPVS  222 (256)
T ss_pred             h--------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH--hcCC----CCCCc
Confidence            1        11234788999999999889999999999999999999999999755433222111  1111    11123


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      ...+..+.+++.+||+.+|.+||++.+.
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~v  250 (256)
T cd08218         223 SHYSYDLRNLVSQLFKRNPRDRPSVNSI  250 (256)
T ss_pred             ccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence            3445789999999999999999999443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.9e-33  Score=323.90  Aligned_cols=191  Identities=23%  Similarity=0.339  Sum_probs=161.4

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      ...|.+...||+|+||.||++.+.  +..||||...      ...+.+|+.+|++|+|||||++++++  ....++||||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            447899999999999999999986  4779999632      23467899999999999999999987  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +. ++|.+++...  ...+++..++.|+.||+.||.|||+   +||+||||||+||||+.++.+||+|||+++.+.....
T Consensus       242 ~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~  315 (461)
T PHA03211        242 YR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS  315 (461)
T ss_pred             cC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence            95 6888887432  3469999999999999999999999   8999999999999999999999999999986543211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL  735 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf  735 (888)
                      ..      ......||+.|+|||++.+..++.++|||||||+||||++|..|+
T Consensus       316 ~~------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        316 TP------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             cc------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            11      112346999999999999999999999999999999999987654

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=5e-33  Score=296.67  Aligned_cols=243  Identities=24%  Similarity=0.378  Sum_probs=194.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|...+.||+|+||.||++...  +..+|+|.+.....  .....+.+|+.+|+.++||||+++++.+  .+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4788899999999999998775  57899999875432  2245788999999999999999999987  4568999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeecccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~  681 (888)
                      +++++|.+++.... ...+++..+..++.+++.||.|||+   +|++|+||+|+||+++.+ +.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            99999999995432 3458999999999999999999999   899999999999999854 568999999998764332


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..         ....|+..|+|||.+.+..++.++||||||+++|+|++|..||.............  ...    ....
T Consensus       157 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~--~~~----~~~~  221 (256)
T cd08220         157 KA---------YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM--SGT----FAPI  221 (256)
T ss_pred             cc---------cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH--hcC----CCCC
Confidence            11         12347899999999998889999999999999999999999997654332222111  111    1112


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      +...+..+.+++.+||..+|.+||++.+.
T Consensus       222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l  250 (256)
T cd08220         222 SDRYSPDLRQLILSMLNLDPSKRPQLSQI  250 (256)
T ss_pred             CCCcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            33345789999999999999999999443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-33  Score=303.82  Aligned_cols=250  Identities=27%  Similarity=0.365  Sum_probs=195.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      ++|++.+.||+|+||.||+|.+.  +..||+|.++...  ......+.+|+++++.++||||+++++++  .+..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36888999999999999999886  5789999987542  22346789999999999999999999998  456899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |++++.|..++.   ....+++..++.++.+++.||.|||.   ++++|+||+|+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            999877766553   23458999999999999999999999   899999999999999999999999999988765432


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc---------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK---------  751 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~---------  751 (888)
                      ..       ......++..|+|||++.+. .++.++||||||+++|+|++|++||................         
T Consensus       155 ~~-------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
T cd07833         155 AS-------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE  227 (288)
T ss_pred             cc-------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence            10       11234578899999999888 88999999999999999999999997654433222111000         


Q ss_pred             -----------cccCCC-----CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          752 -----------NLLDPL-----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       752 -----------~~ld~~-----~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                 ......     ...++...+..+.+|+.+||..+|.+||++ +++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~i  282 (288)
T cd07833         228 LFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC-DEL  282 (288)
T ss_pred             hcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccH-HHH
Confidence                       000000     001222346789999999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=5.4e-33  Score=299.35  Aligned_cols=251  Identities=23%  Similarity=0.410  Sum_probs=195.4

Q ss_pred             CCCccceeeecCceEEEEEEECC---eEEEEEEecCCCCC----------ChhHHHHHHHHHHh-cCCCCeeeeeccc--
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQ----------GPSEFQQEIDILSK-IRHPNLVTLVGAC--  592 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~---~~VAIK~l~~~~~~----------~~~~~~~Ei~iL~~-l~HpnIv~l~g~~--  592 (888)
                      +|.+...||+|+||.||+|.+.+   ..+|+|.+......          ....+.+|+.++.+ ++||||++++++|  
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778899999999999998864   77999987643211          12346778888865 7999999999987  


Q ss_pred             CCceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          593 PEVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       593 ~~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                      .+..++||||+++++|.+++... .....+++..++.++.|++.||.|||+.  .+++|+||+|.|||++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence            45788999999999999987542 3345689999999999999999999952  57999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      |++.......         ......|+..|+|||.+.+..++.++||||||+++|+|++|++||.............  .
T Consensus       159 g~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~--~  227 (269)
T cd08528         159 GLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV--E  227 (269)
T ss_pred             cceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh--h
Confidence            9998654332         0123458999999999998889999999999999999999999997654432221111  1


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      ....+..   ....+..+.+++.+||+.||.+||++ .++..++.
T Consensus       228 ~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~-~e~~~~~~  268 (269)
T cd08528         228 AVYEPLP---EGMYSEDVTDVITSCLTPDAEARPDI-IQVSAMIS  268 (269)
T ss_pred             ccCCcCC---cccCCHHHHHHHHHHCCCCCccCCCH-HHHHHHhc
Confidence            1111111   11234789999999999999999999 66665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=5.1e-33  Score=304.34  Aligned_cols=249  Identities=25%  Similarity=0.305  Sum_probs=191.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV  599 (888)
                      +|...+.||.|+||.||+|...  ++.||||.+......     ....+..|+.+++.++||||+++++++.  +..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4777889999999999999875  578999999765432     2345678999999999999999999984  478999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+ +|+|.+++....  ..+++..++.++.||+.||.|||+   +||+|+||+|+|||++.++.++|+|||++.....
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 899999985322  369999999999999999999999   8999999999999999999999999999986644


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-------
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-------  751 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~-------  751 (888)
                      ....        .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||................       
T Consensus       155 ~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (298)
T cd07841         155 PNRK--------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN  226 (298)
T ss_pred             CCcc--------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence            3211        122346889999999865 467899999999999999999998886544322111110000       


Q ss_pred             -----cccCC---------CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          752 -----NLLDP---------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 -----~~ld~---------~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                           .....         .........+..+.+++.+||..+|.+||++ .+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-~e~l  280 (298)
T cd07841         227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITA-RQAL  280 (298)
T ss_pred             hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCH-HHHh
Confidence                 00000         0000112235678999999999999999999 4443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-33  Score=302.12  Aligned_cols=248  Identities=27%  Similarity=0.397  Sum_probs=188.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      ++|.....||.|+||.||+|...  ++.||||.+...... ....+.+|+.+++.++||||+++++++.  +..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57889999999999999999875  588999998754322 2345778999999999999999999884  478999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +.+ +|.+++...  ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++........
T Consensus        85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            974 899888533  2368899999999999999999999   8999999999999999999999999999875432111


Q ss_pred             cCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-hcc---------cc
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGK---------LK  751 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~-~~~---------~~  751 (888)
                      .        .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.........+. ...         +.
T Consensus       159 ~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (291)
T cd07844         159 T--------YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP  230 (291)
T ss_pred             c--------ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence            0        112246889999999875 4588999999999999999999999965442111110 000         00


Q ss_pred             cc------cC---C------CCCCCC-hhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          752 NL------LD---P------LAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       752 ~~------ld---~------~~~~~p-~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..      ..   .      .....+ ......+.+++.+||+.+|.+||++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e  284 (291)
T cd07844         231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAE  284 (291)
T ss_pred             hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHH
Confidence            00      00   0      000000 011257889999999999999999943

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8.5e-33  Score=296.26  Aligned_cols=247  Identities=31%  Similarity=0.456  Sum_probs=195.2

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|...+.||+|+||.||+|...  +..|++|.+......  ....+.+|+.+++.++|+||+++++++  .+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4778899999999999999874  578999998766543  456789999999999999999999987  4578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++..   ...+++..+..++.+++.||.|||+   ++++|+||+|+||+++.++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            999999999853   3457889999999999999999999   8999999999999999999999999999987654332


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCC---CCchhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHhhcccccccCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGE---LTPKSDVYSFGIILLRLLTGRPALGITK-EVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~---~s~ksDVwSlGviL~elltG~~Pf~~~~-~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....    .....++..|+|||++.+..   ++.++||||||+++|+|++|+.||.... ..........   ...+..
T Consensus       155 ~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~  227 (264)
T cd06626         155 TMGEE----VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPI  227 (264)
T ss_pred             ccccc----ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCC
Confidence            21110    11245789999999998766   8899999999999999999999996542 2221111111   111111


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      +. ....+..+.+++.+||+.+|.+||++.+
T Consensus       228 ~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~  257 (264)
T cd06626         228 PD-SLQLSPEGKDFLDRCLESDPKKRPTASE  257 (264)
T ss_pred             Cc-ccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            11 1122577899999999999999999943

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=308.78  Aligned_cols=246  Identities=25%  Similarity=0.321  Sum_probs=201.5

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ..+.|..-+.||+||||.||-+..+  |+.+|.|.+.+...   .......+|-.+|.+++.+.||.+-.+|  .+.+||
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            3445788889999999999987654  67899988765432   2344578999999999999999998877  578999


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||..|+||+|.-+|....+ +.|++..+..++.+|+.||.+||.   .+||+|||||+|||||+.|+++|+|+|+|..+.
T Consensus       263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecC
Confidence            9999999999999975543 789999999999999999999999   899999999999999999999999999999877


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....         +..+||.+|||||++.++.|+...|+|||||+||||+.|+.||.....-...-   .+........
T Consensus       339 ~g~~~---------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e---Evdrr~~~~~  406 (591)
T KOG0986|consen  339 EGKPI---------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE---EVDRRTLEDP  406 (591)
T ss_pred             CCCcc---------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH---HHHHHHhcch
Confidence            65422         34479999999999999999999999999999999999999996543321110   0111111122


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..++...+++...|....|..||.+|---
T Consensus       407 ~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  407 EEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            34566677899999999999999999764

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3.8e-33  Score=304.70  Aligned_cols=236  Identities=26%  Similarity=0.351  Sum_probs=193.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.+.||+|+||.||++.+.  +..||+|++.....   .....+.+|+++|++++||||+++++++  ....++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            36888899999999999999875  58899999875422   2245688999999999999999999987  45688999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++++|.+++...   ..+++..+..++.|++.||.|||+   +|++|+||+|.|||++.++.+||+|||++......
T Consensus        81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            999999999998533   568999999999999999999999   89999999999999999999999999998765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .           ....|++.|+|||.+.+..++.++||||||+++|+|++|..||...............       ...
T Consensus       155 ~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------~~~  216 (290)
T cd05580         155 T-----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG-------KVR  216 (290)
T ss_pred             C-----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------Ccc
Confidence            1           1234889999999998888999999999999999999999999765532211111100       111


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .|...+..+.+++.+||..+|.+||+.
T Consensus       217 ~~~~~~~~l~~li~~~l~~~p~~R~~~  243 (290)
T cd05580         217 FPSFFSPDAKDLIRNLLQVDLTKRLGN  243 (290)
T ss_pred             CCccCCHHHHHHHHHHccCCHHHccCc
Confidence            233345789999999999999999943

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=4.8e-33  Score=302.18  Aligned_cols=249  Identities=26%  Similarity=0.347  Sum_probs=190.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|+..+.||.|+||.||+|...  +..||||.+......  ....+.+|++++++++||||+++++++  .+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            5788899999999999999875  678999988754322  235688999999999999999999998  3578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +. ++|..++.... ...+++..++.++.|++.||.|||.   ++++||||+|+||+++.++.+||+|||++........
T Consensus        81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            95 68888875432 3568999999999999999999999   8999999999999999999999999999876543211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc---------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN---------  752 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~---------  752 (888)
                      .        .....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||.................         
T Consensus       156 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07860         156 T--------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG  227 (284)
T ss_pred             c--------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence            1        12234688999999887654 68899999999999999999999976544322211110000         


Q ss_pred             -------------ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 -------------LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 -------------~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                   .............+..+.+++.+||+.||.+||++ +++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~~  278 (284)
T cd07860         228 VTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA-KAA  278 (284)
T ss_pred             hhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH-HHH
Confidence                         00000000011234568899999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.6e-33  Score=301.64  Aligned_cols=238  Identities=25%  Similarity=0.316  Sum_probs=195.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      +|.+.+.||.|+||.||+|...  +..||+|.+.....   ...+.+.+|+.++++++||||+++++++  .+..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5788899999999999999886  68899999975432   2346789999999999999999999988  457899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+.+++|.+++...   .++++..+..++.|++.||.|||+   ++++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  154 (258)
T cd05578          81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT  154 (258)
T ss_pred             CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence            99999999998432   578999999999999999999999   899999999999999999999999999987654332


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHhhcccccccCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~ld~~~~  759 (888)
                      .         .....|+..|+|||++.+..++.++|+||||+++|+|++|..||.....  ........  ..    ...
T Consensus       155 ~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~----~~~  219 (258)
T cd05578         155 L---------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ--ET----ADV  219 (258)
T ss_pred             c---------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh--cc----ccc
Confidence            1         1223488899999999888899999999999999999999999976542  11111111  10    112


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..|...+..+.+++.+||..+|.+||++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~  247 (258)
T cd05578         220 LYPATWSTEAIDAINKLLERDPQKRLGD  247 (258)
T ss_pred             cCcccCcHHHHHHHHHHccCChhHcCCc
Confidence            2333445889999999999999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=8.2e-33  Score=299.82  Aligned_cols=241  Identities=28%  Similarity=0.418  Sum_probs=193.5

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      |...+.||.|+||.||+|...  +..||||.+..... .....+.+|+.++..++||||+++++++  .+..++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            667788999999999999874  57899998864432 2235688999999999999999999988  457899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.    ...+++..+..++.+++.||.|||+   +|++|+||+|.||+++.++.++|+|||++..+.....  
T Consensus        86 ~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--  156 (277)
T cd06641          86 GGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--  156 (277)
T ss_pred             CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchh--
Confidence            999999884    2458899999999999999999999   8999999999999999999999999999876543211  


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                            ......|+..|+|||++.+..++.++|||||||++|+|++|.+||.............      .......+..
T Consensus       157 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~  224 (277)
T cd06641         157 ------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP------KNNPPTLEGN  224 (277)
T ss_pred             ------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh------cCCCCCCCcc
Confidence                  1122357889999999988889999999999999999999999997544322211110      0011122334


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      .+..+.+++.+||..+|.+||++ .+++
T Consensus       225 ~~~~~~~~i~~~l~~~p~~Rp~~-~~~l  251 (277)
T cd06641         225 YSKPLKEFVEACLNKEPSFRPTA-KELL  251 (277)
T ss_pred             cCHHHHHHHHHHccCChhhCcCH-HHHH
Confidence            45789999999999999999999 4443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-33  Score=300.00  Aligned_cols=241  Identities=26%  Similarity=0.403  Sum_probs=192.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCChhHHHHHHHHHHhcC---CCCeeeeecccC--CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIR---HPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~--~~~~LV~  600 (888)
                      .|+..+.||.|+||.||+|.+.  +..||+|.+.... ......+.+|+.+++.++   |||+++++++|.  ...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            4777888999999999999874  5789999987543 233457889999999997   999999999883  4688999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++++|.+++..    ..+++..++.++.+++.||.|||+   .||+|+||+|+||+++.++.++|+|||++..+...
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999998842    368999999999999999999999   89999999999999999999999999998876543


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ...        .....|+..|+|||.+.++ .++.++|||||||++|+|++|.+||.............   ....   .
T Consensus       155 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~---~~~~---~  220 (277)
T cd06917         155 SSK--------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP---KSKP---P  220 (277)
T ss_pred             ccc--------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---cCCC---C
Confidence            211        1233589999999998764 47889999999999999999999997654433221111   1111   1


Q ss_pred             CCCh-hhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          760 DWPF-VQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       760 ~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      .++. ..+..+.+++.+||+.||.+||++.+.
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~i  252 (277)
T cd06917         221 RLEDNGYSKLLREFVAACLDEEPKERLSAEEL  252 (277)
T ss_pred             CCCcccCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence            1111 145689999999999999999998433

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.6e-33  Score=302.22  Aligned_cols=248  Identities=26%  Similarity=0.365  Sum_probs=192.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|.+.+.||.|+||.||+|.+.  +..|++|++.....  .....+.+|+.+++.++||||+++++++  ....++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4778889999999999999875  68899999876542  2346789999999999999999999987  4568899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      + +++|.+++...  ..++++..++.++.||+.||.|||+   ++++|+||||+||+++.++.++|+|||++........
T Consensus        81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            9 99999988533  2569999999999999999999999   8999999999999999999999999999986654321


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-c----------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-L----------  750 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-~----------  750 (888)
                      .       ......|+..|+|||++.+. .++.++|||||||++|+|+||.+||.............. +          
T Consensus       155 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd07832         155 R-------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG  227 (286)
T ss_pred             C-------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence            0       11234589999999998654 468999999999999999999998865543221111000 0          


Q ss_pred             -------ccccCCCCC-----CCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          751 -------KNLLDPLAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       751 -------~~~ld~~~~-----~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                             ..+..+...     ......+..+.+|+.+||..+|.+||++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  278 (286)
T cd07832         228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE  278 (286)
T ss_pred             ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence                   000000000     001123478999999999999999999943

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.2e-34  Score=313.36  Aligned_cols=246  Identities=27%  Similarity=0.387  Sum_probs=192.8

Q ss_pred             hhcCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCC--CCChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHS--LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~L  598 (888)
                      .....|++.++||+||.+.||++...+ +.+|+|.+....  .....-|.+|+..|.+|+ |.+||+||+|-  +...|+
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            445579999999999999999998775 568888665432  233467999999999995 99999999985  668999


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||- ..+|..+|.++.... ..| .+..+..|++.|+.++|.   +||||.||||.|+|+-. |.+||+|||+|..+.
T Consensus       438 vmE~G-d~DL~kiL~k~~~~~-~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  438 VMECG-DIDLNKILKKKKSID-PDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ  510 (677)
T ss_pred             Eeecc-cccHHHHHHhccCCC-chH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence            99997 469999996554322 223 788899999999999999   99999999999999964 689999999999877


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT  747 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----------~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~  747 (888)
                      .+.+..      .+...+||+.||+||.+...           ..+.++||||||||||+|+.|++||+......     
T Consensus       511 ~DTTsI------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~-----  579 (677)
T KOG0596|consen  511 PDTTSI------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI-----  579 (677)
T ss_pred             ccccce------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-----
Confidence            654332      34556799999999998542           25678999999999999999999997544322     


Q ss_pred             cccccccCC-CCCCCChhhHH-HHHHHHHHHhhcCCCCCCChH
Q 002719          748 GKLKNLLDP-LAGDWPFVQAE-QLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       748 ~~~~~~ld~-~~~~~p~~~~~-~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .++..+.+| ....+|..... ++.+++..||..||++||++.
T Consensus       580 aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~  622 (677)
T KOG0596|consen  580 AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIP  622 (677)
T ss_pred             HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcH
Confidence            234445555 22234433333 399999999999999999994

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=4.2e-33  Score=302.69  Aligned_cols=248  Identities=26%  Similarity=0.327  Sum_probs=187.0

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|...+.||+|+||.||+|.+.  +..||+|.+......  ....+.+|+.+++.++||||+++++++.  ...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4778889999999999999885  678999998754222  2356788999999999999999999983  468999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +. ++|.+++...  ...+++..++.++.||+.||.|||+   ++|+||||||+||+++.++.+||+|||++........
T Consensus        81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence            97 5787777432  3468999999999999999999999   8999999999999999999999999999876533211


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-cc-----------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-GK-----------  749 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~-~~-----------  749 (888)
                      .        .....+++.|+|||++.+. .++.++|||||||++|+|+||..||............ ..           
T Consensus       155 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
T cd07839         155 C--------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP  226 (284)
T ss_pred             C--------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence            1        1233578999999998765 4789999999999999999988875322211111100 00           


Q ss_pred             -cccccC-----CCCC-----CCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          750 -LKNLLD-----PLAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       750 -~~~~ld-----~~~~-----~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                       .....+     ....     ......+..+.+|+.+||+.||.+||++ +++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-~~i  278 (284)
T cd07839         227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA-EEA  278 (284)
T ss_pred             HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH-HHH
Confidence             000000     0000     0011234678999999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=8.3e-33  Score=301.50  Aligned_cols=242  Identities=24%  Similarity=0.355  Sum_probs=193.4

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      |.....||.|++|.||++...  +..|++|.+........+.+.+|+.+++.++||||+++++++  .+..++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            444568999999999999865  578999998755444456788999999999999999999987  4678999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|.+++..    ..+++..+..++.|++.||.|||+   +|++||||+|+||+++.++.++|+|||++.........  
T Consensus       101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~--  171 (285)
T cd06648         101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR--  171 (285)
T ss_pred             CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc--
Confidence            999999853    458899999999999999999999   89999999999999999999999999988754332111  


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                            .....|++.|+|||.+.+..++.++|||||||++|+|++|++||............   .....+. ...+...
T Consensus       172 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~---~~~~~~~-~~~~~~~  241 (285)
T cd06648         172 ------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI---RDNLPPK-LKNLHKV  241 (285)
T ss_pred             ------cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH---HhcCCCC-CcccccC
Confidence                  12235899999999998888999999999999999999999999655433221111   1111111 1112224


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      +..+.+++.+||..+|.+||++ .++
T Consensus       242 ~~~l~~li~~~l~~~p~~Rpt~-~~i  266 (285)
T cd06648         242 SPRLRSFLDRMLVRDPAQRATA-AEL  266 (285)
T ss_pred             CHHHHHHHHHHcccChhhCcCH-HHH
Confidence            5789999999999999999999 444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-33  Score=315.84  Aligned_cols=188  Identities=21%  Similarity=0.319  Sum_probs=158.1

Q ss_pred             CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      .+|.+.+.||+|+||.||+|...+  ..||+|+....      ....|+.+|++++||||+++++++  ....++||||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            468999999999999999999864  67999975432      346799999999999999999988  45688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      . ++|.+++..  ....+++..++.|+.||+.||.|||.   +||+||||||+|||++.++.+||+|||+++....... 
T Consensus       140 ~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-  212 (357)
T PHA03209        140 S-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA-  212 (357)
T ss_pred             C-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCcc-
Confidence            5 688888743  33568999999999999999999999   8999999999999999999999999999874322110 


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCC-CCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALG  736 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~-~Pf~  736 (888)
                              .....||+.|+|||++.+..++.++|||||||++|+|+++. ++|.
T Consensus       213 --------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~  258 (357)
T PHA03209        213 --------FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE  258 (357)
T ss_pred             --------cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence                    12345899999999999999999999999999999999854 4443

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.1e-32  Score=300.78  Aligned_cols=250  Identities=27%  Similarity=0.400  Sum_probs=189.1

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ++.+|.+.+.||+|+||.||+|...  +..||+|.+....... ...+.+|+.+++.++|+||+++++++.  +..++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4578999999999999999999875  6889999987553322 346789999999999999999999873  4688999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+. ++|.+.+...  ...+++..+..++.|++.||.|||+   ++|+|+||||+|||++.++.+||+|||+++.....
T Consensus        83 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          83 EYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             eccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence            9996 6776666322  3457888899999999999999999   89999999999999999999999999998754322


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc-----------
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-----------  748 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~-----------  748 (888)
                      ...        .....+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.........+...           
T Consensus       157 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~  228 (291)
T cd07870         157 SQT--------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDT  228 (291)
T ss_pred             CCC--------CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhh
Confidence            111        1123478999999998764 57889999999999999999999997554322111110           


Q ss_pred             -----ccccccCCC-----CCC----C-ChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          749 -----KLKNLLDPL-----AGD----W-PFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       749 -----~~~~~ld~~-----~~~----~-p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                           .+.......     ...    + ....+..+.+++.+|+..||.+||++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~  284 (291)
T cd07870         229 WPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQD  284 (291)
T ss_pred             hhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHH
Confidence                 000000000     000    0 0012457889999999999999999943

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=5.4e-33  Score=301.40  Aligned_cols=244  Identities=26%  Similarity=0.387  Sum_probs=187.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHH-HHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDI-LSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~i-L~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      ++|.+...||+|+||.||+|.+.  +..||||.+...... ....+..|+.+ ++.++||||+++++++  ....++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            36888999999999999999886  688999998764322 23456666665 5667899999999988  457899999


Q ss_pred             ecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          602 YLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       602 y~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |++ |+|.+++... .....+++..++.++.|++.||.|||+   + +++||||||+|||++.++.+||+|||++..+..
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            996 6888877542 334579999999999999999999998   6 899999999999999999999999999876532


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHhhccccccc
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS----GELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTGKLKNLL  754 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-~~~~~~~~~~~~~l  754 (888)
                      ...         .+...|+..|+|||.+.+    ..++.++|+|||||++|+|++|+.||..... .......      .
T Consensus       157 ~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------~  221 (283)
T cd06617         157 SVA---------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV------V  221 (283)
T ss_pred             ccc---------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH------H
Confidence            211         122357899999998865    4578899999999999999999999964221 1111110      0


Q ss_pred             CCCCCCCC-hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          755 DPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       755 d~~~~~~p-~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .......+ ...+..+.+++.+||..+|.+||++ +++
T Consensus       222 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-~~i  258 (283)
T cd06617         222 EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNY-PEL  258 (283)
T ss_pred             hcCCCCCCccccCHHHHHHHHHHccCChhhCcCH-HHH
Confidence            11111111 1245789999999999999999999 444

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.5e-32  Score=290.55  Aligned_cols=244  Identities=30%  Similarity=0.470  Sum_probs=198.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      +|...+.||.|++|.||++...  +..|++|++..........+.+|+.+++.++||||+++++++  ....++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4777889999999999999986  678999999876554567899999999999999999999987  457889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++....  ..+++..+..++.+++.||.|||.   +|++||||+|+||+++.++.++|+|||++........  
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--  153 (253)
T cd05122          81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--  153 (253)
T ss_pred             CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence            999999985432  568999999999999999999999   8999999999999999999999999999876654321  


Q ss_pred             CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV  764 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~  764 (888)
                             .....|+..|+|||++.+..++.++||||||+++|+|++|++||..............  ....  ....+..
T Consensus       154 -------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~--~~~~~~~  222 (253)
T cd05122         154 -------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGPP--GLRNPEK  222 (253)
T ss_pred             -------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCCC--CcCcccc
Confidence                   1223478999999999888899999999999999999999999976533322222211  1111  1111222


Q ss_pred             hHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          765 QAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       765 ~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .+..+.+++.+||+.||.+||++ .++
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t~-~~~  248 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPTA-EQL  248 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCCH-HHH
Confidence            25789999999999999999999 444

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=9e-33  Score=299.83  Aligned_cols=249  Identities=26%  Similarity=0.368  Sum_probs=192.1

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      +|+..++||.|++|.||+|...  +..||||.+...... ....+.+|+.++++++||||+++++++.  +..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788899999999999999985  678999998765332 3456788999999999999999999984  4689999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++ +|.+++........+++..+..++.|++.||.|||+   ++++||||||+||+++.++.++|+|||++........ 
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-  155 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-  155 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence            85 888888654444579999999999999999999999   8999999999999999999999999999875543211 


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---------cc-
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---------KN-  752 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---------~~-  752 (888)
                             ......+++.|++||++.+. .++.++|||||||++|+|++|++||...............         .. 
T Consensus       156 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
T cd07836         156 -------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI  228 (284)
T ss_pred             -------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence                   11223478899999998664 5788999999999999999999999755432211110000         00 


Q ss_pred             -ccCCCCCC-----------CChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          753 -LLDPLAGD-----------WPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       753 -~ld~~~~~-----------~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                       ........           .....+..+.+++.+||+.||.+||++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  277 (284)
T cd07836         229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHD  277 (284)
T ss_pred             hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHH
Confidence             00000000           11123467889999999999999999943

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-33  Score=299.86  Aligned_cols=248  Identities=25%  Similarity=0.340  Sum_probs=190.3

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      |++.+.||.|++|.||+|.+.  +..||+|++......  ....+.+|+.+++.++||||+++++++.  +..++||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            567788999999999999875  688999998754322  2356889999999999999999999883  5788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      + ++|.+++.... ...+++..++.++.|++.||.|||+   ++++||||+|+||+++.++.++|+|||++.........
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~  155 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT  155 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence            5 68999885332 1368999999999999999999999   89999999999999999999999999998755322111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------  750 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~------------  750 (888)
                              .....+++.|+|||++.+. .++.++||||||+++|+|++|++||...............            
T Consensus       156 --------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (283)
T cd07835         156 --------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV  227 (283)
T ss_pred             --------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence                    1223468899999988664 5789999999999999999999999765443222111000            


Q ss_pred             ----------ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          751 ----------KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       751 ----------~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                ...............+..+.+++.+||+.+|.+||++ +++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~i  277 (283)
T cd07835         228 TSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA-KAA  277 (283)
T ss_pred             hhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH-HHH
Confidence                      0000000011122334678999999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=9e-33  Score=294.88  Aligned_cols=244  Identities=26%  Similarity=0.407  Sum_probs=194.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      +|...+.||.|+||.||+|..+  +..||+|.+.....  .....+.+|+.+++.++||||+++++.+.  ...++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4778889999999999999886  57899999865422  23457889999999999999999999884  468899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-ceeeecccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNE  681 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~  681 (888)
                      +++++|.+++.... ...+++..+..++.+++.||.|||+   ++++|+||||+||+++.++ .+||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence            99999999885432 3457999999999999999999999   8999999999999998875 56999999987654322


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..        .....|++.|+|||++.+..++.++||||||+++|+|++|..||............  ......+.    
T Consensus       157 ~~--------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~----  222 (257)
T cd08225         157 EL--------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI--CQGYFAPI----  222 (257)
T ss_pred             cc--------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH--hcccCCCC----
Confidence            11        11234899999999998888999999999999999999999999765433322211  11111111    


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      +...+..+.+++.+||..+|.+||++ +++
T Consensus       223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~-~~l  251 (257)
T cd08225         223 SPNFSRDLRSLISQLFKVSPRDRPSI-TSI  251 (257)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCcCH-HHH
Confidence            22334689999999999999999999 444

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=7.7e-33  Score=296.32  Aligned_cols=246  Identities=24%  Similarity=0.351  Sum_probs=198.8

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      ++|.+.+.||.|+||.||++...  +..|++|++..... .....+.+|+.++..++||||+++++++.  ...++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36888899999999999999886  67899999876543 33567999999999999999999999883  578999999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++...   ..+++..++.++.|++.||.|||+.  .+++||||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~  155 (264)
T cd06623          81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD  155 (264)
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence            9999999999533   5689999999999999999999983  5799999999999999999999999999886643321


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHhhcccccccCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ..        ....++..|+|||.+.+..++.++||||||+++|+|+||.+||....  ..........     ......
T Consensus       156 ~~--------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~  222 (264)
T cd06623         156 QC--------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-----DGPPPS  222 (264)
T ss_pred             cc--------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-----cCCCCC
Confidence            11        12347899999999999899999999999999999999999997653  2111111111     111112


Q ss_pred             CChh-hHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          761 WPFV-QAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       761 ~p~~-~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      .+.. .+..+.+++.+||..+|.+||++ .+++
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~R~~~-~~ll  254 (264)
T cd06623         223 LPAEEFSPEFRDFISACLQKDPKKRPSA-AELL  254 (264)
T ss_pred             CCcccCCHHHHHHHHHHccCChhhCCCH-HHHH
Confidence            2333 56789999999999999999999 4443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-34  Score=298.25  Aligned_cols=238  Identities=25%  Similarity=0.309  Sum_probs=197.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCh---hHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~---~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      -++|+.++.||+|.||.|.++.-+  ++.+|||++++......   .+-..|-.+|+..+||.+..|-..|  .+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            357899999999999999988765  67899999988654433   3456788999999999999998777  5789999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||..||.|.-+|.   ....+++.....+-.+|..||.|||+   ++||+||||.+|+|||.+|++||+|||+|+.--.
T Consensus       247 MeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~  320 (516)
T KOG0690|consen  247 MEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK  320 (516)
T ss_pred             EEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhccc
Confidence            99999999999994   34569999999999999999999999   8999999999999999999999999999985332


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      .+  ..      .....|||.|+|||++....|+.+.|+|.+||++|||++|+.||...+..       ++..++--..-
T Consensus       321 ~g--~t------~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-------kLFeLIl~ed~  385 (516)
T KOG0690|consen  321 YG--DT------TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-------KLFELILMEDL  385 (516)
T ss_pred             cc--ce------eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-------HHHHHHHhhhc
Confidence            22  11      23456999999999999999999999999999999999999999654432       22222222223


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCC
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RP  785 (888)
                      .+|...+++...|+..+|.+||++|-
T Consensus       386 kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  386 KFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             cCCccCCHHHHHHHHHHhhcChHhhc
Confidence            46777788999999999999999994

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-34  Score=335.02  Aligned_cols=242  Identities=27%  Similarity=0.323  Sum_probs=198.4

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~L  598 (888)
                      ...+|.+.+.||+|+||.|..+..+  ++.||+|++++..   .....-|..|-++|..-+.+.|++|+.+|.+  ++|+
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            3457999999999999999999886  4679999998732   2334568999999999999999999999954  7899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||++||+|..+|.+.+   ++++..+..++..|..||.-||+   .|+|||||||+|||||..|++||+|||.|-.+.
T Consensus       153 VMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             EEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            999999999999996443   69999999999999999999999   899999999999999999999999999998887


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      .++...       ....+|||.|++||++..     +.|++.+|+||+||++|||+.|..||....-+...-........
T Consensus       227 ~dG~V~-------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~  299 (1317)
T KOG0612|consen  227 ADGTVR-------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES  299 (1317)
T ss_pred             CCCcEE-------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence            655432       234579999999999953     56999999999999999999999999766655443332222222


Q ss_pred             cCCCCCCCC--hhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          754 LDPLAGDWP--FVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       754 ld~~~~~~p--~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      +     .+|  ...++...+||.+.+. +|..|-.
T Consensus       300 l-----~FP~~~~VSeeakdLI~~ll~-~~e~RLg  328 (1317)
T KOG0612|consen  300 L-----SFPDETDVSEEAKDLIEALLC-DREVRLG  328 (1317)
T ss_pred             c-----CCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence            2     223  3467889999988775 6677766

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.1e-32  Score=301.08  Aligned_cols=248  Identities=26%  Similarity=0.358  Sum_probs=191.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--C--CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--P--EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~--~~~~LV  599 (888)
                      ++|...+.||.|+||.||+|.+.  ++.|++|.+......  ....+.+|+.++.+++||||+++++++  .  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46888899999999999999986  578999998754322  223567899999999999999999987  3  578999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+. ++|.+++....  ..+++..++.++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||++.....
T Consensus        85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            99997 58988885432  368999999999999999999999   8999999999999999999999999999886654


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------  749 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~---------  749 (888)
                      ....        .....+++.|+|||.+.+. .++.++||||||+++|+|++|.+||..............         
T Consensus       159 ~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  230 (293)
T cd07843         159 PLKP--------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI  230 (293)
T ss_pred             Cccc--------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence            3211        1223478899999998764 468999999999999999999999975443221111000         


Q ss_pred             --------------cccc-cCCCCCCCChh-hHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          750 --------------LKNL-LDPLAGDWPFV-QAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       750 --------------~~~~-ld~~~~~~p~~-~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                    .... .......++.. .+..+.+|+.+||+.+|++||++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~e  286 (293)
T cd07843         231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAED  286 (293)
T ss_pred             HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHH
Confidence                          0000 00011122222 3677899999999999999999943

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.8e-32  Score=289.81  Aligned_cols=245  Identities=27%  Similarity=0.413  Sum_probs=198.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC----CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~LV~  600 (888)
                      +|...+.||+|++|.||+|...  +..|++|++.....  .....+.+|+.++++++||||+++++.+.    ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999987  68899999876543  23567899999999999999999999873    4588999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++++|.+++...   ..+++..++.++.+++.||.|||+   .+++|+||+|+||+++.++.++|+|||.+......
T Consensus        81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            999999999998533   379999999999999999999999   89999999999999999999999999998876554


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~~~~~~~ld~~~~  759 (888)
                      ...      .......++..|+|||.+.+..++.++||||||+++|+|++|..||...... ........     .....
T Consensus       155 ~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~  223 (260)
T cd06606         155 ETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-----SGEPP  223 (260)
T ss_pred             ccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-----cCCCc
Confidence            321      0012345889999999998888999999999999999999999999765421 11111110     01112


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      ..+...+..+.+++.+||..+|.+||++.+.
T Consensus       224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~l  254 (260)
T cd06606         224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADEL  254 (260)
T ss_pred             CCCcccCHHHHHHHHHhCcCChhhCCCHHHH
Confidence            2344446889999999999999999999433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.3e-32  Score=300.54  Aligned_cols=250  Identities=25%  Similarity=0.300  Sum_probs=189.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcC-CCCeeeeecccC--Cc-----
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EV-----  595 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~-----  595 (888)
                      ++|...+.||+|+||.||+|.+.  ++.||||.+.....  .....+.+|+.+++.+. ||||+++++++.  +.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            36888999999999999999875  57899998765432  22356889999999995 699999999873  22     


Q ss_pred             eEEEEEecCCCChhhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeeccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFG  672 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFG  672 (888)
                      .++||||+++ +|.+++.....  ...+++..++.++.||+.||.|||+   ++|+||||+|+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            6899999985 78888754322  3568999999999999999999999   89999999999999998 8999999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      ++..+......        .....+++.|+|||++.+ ..++.++||||||+++|+|++|.+||................
T Consensus       157 ~~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  228 (295)
T cd07837         157 LGRAFSIPVKS--------YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL  228 (295)
T ss_pred             cceecCCCccc--------cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            98765332111        112346889999998865 457899999999999999999999997655443222111000


Q ss_pred             c-----cc------------CC----CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          752 N-----LL------------DP----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       752 ~-----~l------------d~----~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .     ..            ..    .........+..+.++|.+||..||.+||++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e  287 (295)
T cd07837         229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA  287 (295)
T ss_pred             CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence            0     00            00    000000124567999999999999999999943

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.5e-33  Score=307.86  Aligned_cols=240  Identities=23%  Similarity=0.291  Sum_probs=184.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      -|..++.||-|+||.|.++...  ...+|.|.+.+.+..   ...+++.|-+||...+.+.||+||..|.  +.+|+||+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            4667788999999999998544  456999998775432   2346788999999999999999999994  58999999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |++||++..+|..   ...|.+..++.++.++.+|+.++|.   .|+|||||||+|||||.+|++||+|||||.-+....
T Consensus       710 YIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH  783 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  783 (1034)
T ss_pred             ccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceecc
Confidence            9999999999853   3568899999999999999999999   899999999999999999999999999997543211


Q ss_pred             ccCCC----------------------------------ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHH
Q 002719          682 ISSNN----------------------------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR  727 (888)
Q Consensus       682 ~~~~~----------------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~e  727 (888)
                      .....                                  ...+.....+||+.|+|||++....|+.-||+||.||||||
T Consensus       784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e  863 (1034)
T KOG0608|consen  784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE  863 (1034)
T ss_pred             ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence            10000                                  00011223479999999999999999999999999999999


Q ss_pred             HHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHh
Q 002719          728 LLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCC  777 (888)
Q Consensus       728 lltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl  777 (888)
                      |+.|++||-............++...++..   +....+.+..+||.+++
T Consensus       864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~---~~~~ls~e~~~li~kLc  910 (1034)
T KOG0608|consen  864 MLVGQPPFLADTPGETQYKVINWRNFLHIP---YQGNLSKEALDLIQKLC  910 (1034)
T ss_pred             HhhCCCCccCCCCCcceeeeeehhhccccc---cccccCHHHHHHHHHHh
Confidence            999999997655444444444444443321   12233455666665544

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.2e-32  Score=298.62  Aligned_cols=236  Identities=25%  Similarity=0.339  Sum_probs=187.6

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL  608 (888)
                      ||+|+||+||++...  +..||+|.+.....   .....+..|+.+|+.++||||+++++++  .+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999765  67899999865322   2234567899999999999999999987  4578999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++..... ..+++..++.++.|++.||.|||+   +|++||||+|+||+++.++.+||+|||++........      
T Consensus        81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------  150 (277)
T cd05577          81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK------  150 (277)
T ss_pred             HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc------
Confidence            999854332 468999999999999999999999   8999999999999999999999999999876543111      


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                         .....++..|+|||.+.++.++.++|||||||++|+|++|+.||......  ...+.....     ......+...+
T Consensus       151 ---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  222 (277)
T cd05577         151 ---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-----EMAVEYPDKFS  222 (277)
T ss_pred             ---cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-----cccccCCccCC
Confidence               11234788999999998888999999999999999999999999654321  111111111     11112333446


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHH
Q 002719          767 EQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..+.+++.+||+.+|.+||++.+
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCc
Confidence            78999999999999999996633

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=7e-33  Score=297.37  Aligned_cols=242  Identities=27%  Similarity=0.382  Sum_probs=193.6

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|+..+.||.|+||.||++.+.  +..|++|.+..... .....+.+|+++++.++||||+++++++  ....++|+||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            5777889999999999999887  67899999876533 2345688999999999999999999987  45788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++++|.+++....  ..+++..+..++.|++.||.|||+.  .+++|+||||+||+++.++.++|+|||++.........
T Consensus        82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  157 (265)
T cd06605          82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK  157 (265)
T ss_pred             CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence            9999999985332  5689999999999999999999982  57999999999999999999999999998765432111


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch----HHHHHHhhcccccccCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK----EVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~----~~~~~~~~~~~~~~ld~~~~  759 (888)
                                ...++..|+|||++.+..++.++||||||+++|+|++|..||....    ........     .......
T Consensus       158 ----------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~  222 (265)
T cd06605         158 ----------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY-----IVNEPPP  222 (265)
T ss_pred             ----------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH-----HhcCCCC
Confidence                      1347889999999998899999999999999999999999996542    11111111     1111111


Q ss_pred             CCChh-hHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          760 DWPFV-QAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       760 ~~p~~-~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..+.. .+..+.++|.+||..+|.+||++.+
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  253 (265)
T cd06605         223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKE  253 (265)
T ss_pred             CCChhhcCHHHHHHHHHHcCCCchhCcCHHH
Confidence            11222 4577999999999999999999943

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.1e-32  Score=302.27  Aligned_cols=258  Identities=16%  Similarity=0.195  Sum_probs=181.7

Q ss_pred             cCCCCccceeeecCceEEEEEEECCe-----EEEEEEecCCCCCCh-h----------HHHHHHHHHHhcCCCCeeeeec
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRHM-----QVAIKMLHPHSLQGP-S----------EFQQEIDILSKIRHPNLVTLVG  590 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~VAIK~l~~~~~~~~-~----------~~~~Ei~iL~~l~HpnIv~l~g  590 (888)
                      .+.|.+.+.||+|+||.||+|.+.+.     .+|+|+......... +          ....+...+..++|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            35799999999999999999987643     567776433221110 0          1122334456678999999998


Q ss_pred             ccCC------ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC
Q 002719          591 ACPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF  664 (888)
Q Consensus       591 ~~~~------~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~  664 (888)
                      ++..      ..+++++++. .++.+.+..   ....++..+..|+.|++.||.|||+   ++|+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCC
Confidence            7522      3467788774 466666632   2335788899999999999999999   8999999999999999999


Q ss_pred             ceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Q 002719          665 VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA  744 (888)
Q Consensus       665 ~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~  744 (888)
                      .++|+|||+|+.+.......... ........||+.|+|||++.+..++.++|||||||+||+|++|.+||.........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~-~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~  242 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYS-KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL  242 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccc-cccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence            99999999998764322111100 01112346999999999999999999999999999999999999999755221111


Q ss_pred             H---hhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          745 L---DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       745 ~---~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      .   .......+.....  .....+..+.+++..||..+|.+||++ +++.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~-~~l~~~~  293 (294)
T PHA02882        243 IHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDY-DALIKIF  293 (294)
T ss_pred             HHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCH-HHHHHhh
Confidence            1   1111111111100  012235789999999999999999999 6666654

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=4.3e-33  Score=315.62  Aligned_cols=200  Identities=30%  Similarity=0.384  Sum_probs=169.5

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcC-C-----CCeeeeeccc--CCc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-H-----PNLVTLVGAC--PEV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-H-----pnIv~l~g~~--~~~  595 (888)
                      ...+|.+...||+|.||.|.++.+.  +..||||++++... -..+...|+.+|..|+ |     -|+|+++++|  .++
T Consensus       184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            3347899999999999999999886  57899999986532 2345677999999997 3     4899999987  678


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC--Cceeeecccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN--FVSKLSDFGI  673 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~--~~vKL~DFGl  673 (888)
                      .|||+|.+ ..+|.++|..+. ..+|+...+..|+.||+.||.+||.   .+|||+||||+||||..-  ..+||+|||.
T Consensus       263 lciVfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  263 LCIVFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGS  337 (586)
T ss_pred             eeeeehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEeccc
Confidence            99999999 569999996554 4569999999999999999999999   899999999999999643  3899999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ  742 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~  742 (888)
                      |+.......           ...-+..|.|||++.+.+|+.+.|+||||||++||++|.|.|.+.++.+
T Consensus       338 Sc~~~q~vy-----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D  395 (586)
T KOG0667|consen  338 SCFESQRVY-----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD  395 (586)
T ss_pred             ccccCCcce-----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence            987655432           1235789999999999999999999999999999999999998776543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-32  Score=293.80  Aligned_cols=244  Identities=25%  Similarity=0.366  Sum_probs=194.2

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-----CChhHHHHHHHHHHhcCCCCeeeeecccC----Cce
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVW  596 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-----~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~  596 (888)
                      .+|.+.+.||+|+||.||+|...  +..||+|.+.....     .....+.+|+.++++++||||+++++++.    ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47889999999999999999875  57899998754311     12346889999999999999999999873    247


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||+++++|.+++..   ...+++..+..++.|++.||.|||+   ++++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999999843   2458889999999999999999999   8999999999999999999999999999986


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      .........     ......|+..|+|||++.+..++.++|||||||++|+|++|++||.............     ..+
T Consensus       156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~  225 (264)
T cd06653         156 IQTICMSGT-----GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-----TQP  225 (264)
T ss_pred             cccccccCc-----cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-----cCC
Confidence            532211100     0123458899999999998889999999999999999999999997654433222211     111


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .....|...+..+.+++.+||. +|..||+..
T Consensus       226 ~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~  256 (264)
T cd06653         226 TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAE  256 (264)
T ss_pred             CCCCCCcccCHHHHHHHHHHhc-CcccCccHH
Confidence            2233455566889999999999 579999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-32  Score=305.98  Aligned_cols=252  Identities=23%  Similarity=0.334  Sum_probs=189.6

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeecccC-------Cce
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVW  596 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-------~~~  596 (888)
                      +++|.+.+.||+|+||.||+|...  +..||||.+..... .....+.+|+.+++.++||||+++++++.       ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            468999999999999999999875  67899999865322 22456788999999999999999998762       246


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++|+||+. ++|..++.    ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||++..
T Consensus        84 ~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceee
Confidence            89999996 47877773    3468999999999999999999999   8999999999999999999999999999886


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--------
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--------  747 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~--------  747 (888)
                      .........     ......|++.|+|||.+.+ ..++.++|||||||++|+|++|++||............        
T Consensus       156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~  230 (336)
T cd07849         156 ADPEHDHTG-----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS  230 (336)
T ss_pred             ccccccccC-----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            543221111     1123458999999998755 46899999999999999999999999654322111000        


Q ss_pred             -cccccccC----------CCCCCCC-----hhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          748 -GKLKNLLD----------PLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       748 -~~~~~~ld----------~~~~~~p-----~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                       ..+..+..          +.....+     ...+..+.+++.+||+.+|.+||++ .+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~e~l  290 (336)
T cd07849         231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITV-EEAL  290 (336)
T ss_pred             HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCH-HHHh
Confidence             00000000          0000000     1124568999999999999999999 4443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.1e-32  Score=300.27  Aligned_cols=249  Identities=25%  Similarity=0.310  Sum_probs=187.5

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|.....||+|+||.||++...  +..||+|.+...... ....+.+|+.++.++. ||||+++++++  ....+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4556678999999999999886  578999998754322 2456889999999996 99999999987  4467899999


Q ss_pred             cCCCChhhhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          603 LPNGSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       603 ~~ggsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      +. ++|.++...  ......+++..+..++.+++.||.|||+.  .+++||||||+|||++.++.+||+|||++..+...
T Consensus        85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            85 455554321  12235689999999999999999999972  38999999999999999999999999998765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      ...         ....|++.|+|||.+.+.   .++.++|||||||++|+|++|++||.............. .......
T Consensus       162 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  231 (288)
T cd06616         162 IAK---------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVV-KGDPPIL  231 (288)
T ss_pred             Ccc---------ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhc-CCCCCcC
Confidence            111         223478999999999776   689999999999999999999999965442211111110 0001111


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ....+...+..+.+|+.+||+.+|.+||++ ++|
T Consensus       232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~i  264 (288)
T cd06616         232 SNSEEREFSPSFVNFINLCLIKDESKRPKY-KEL  264 (288)
T ss_pred             CCcCCCccCHHHHHHHHHHccCChhhCcCH-HHH
Confidence            111222356789999999999999999999 444

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2e-32  Score=299.78  Aligned_cols=240  Identities=23%  Similarity=0.347  Sum_probs=190.4

Q ss_pred             CccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      ....+||+|+||.||+|...  +..||||.+..........+.+|+.+++.++||||+++++++  .+..++||||++++
T Consensus        23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            33467999999999999875  578999998654444456788999999999999999999987  56789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++.    ...+++..+..++.|++.||.|||+   +|++||||+|+||+++.++.++|+|||++.........   
T Consensus       103 ~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~---  172 (292)
T cd06657         103 ALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---  172 (292)
T ss_pred             cHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccccc---
Confidence            9999873    2358899999999999999999999   89999999999999999999999999988755432111   


Q ss_pred             ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                           .....|++.|+|||++.+..++.++||||||+++|+|++|.+||............   ...+.+.... ....+
T Consensus       173 -----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~  243 (292)
T cd06657         173 -----RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPKLKN-LHKVS  243 (292)
T ss_pred             -----ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhhCCcccCC-cccCC
Confidence                 12234889999999998888999999999999999999999999765433221111   0011111101 12234


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHH
Q 002719          767 EQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..+.+++.+||..+|.+||++.+
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~  266 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAE  266 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHH
Confidence            67899999999999999999943

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-32  Score=302.25  Aligned_cols=201  Identities=25%  Similarity=0.359  Sum_probs=164.5

Q ss_pred             CCCccceeeecCceEEEEEEEC----CeEEEEEEecCCC---CCChhHHHHHHHHHHhcCCCCeeeeecccC----CceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~  597 (888)
                      .|.+...||+|+||.||+|...    +..||+|.+....   ......+.+|+.+++.++||||+++++++.    ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3778889999999999999884    5789999998743   233456889999999999999999999883    4589


Q ss_pred             EEEEecCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC----CCceeeecc
Q 002719          598 LVYEYLPNGSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDF  671 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~--~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~----~~~vKL~DF  671 (888)
                      +||||+++ +|.+++...  .....+++..++.++.|++.||.|||+   ++|+||||||+|||++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 676666422  222478999999999999999999999   89999999999999999    999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGIT  738 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~  738 (888)
                      |++..+.......     .......+++.|+|||.+.+. .++.++|||||||++|+|++|++||...
T Consensus       157 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         157 GLARLFNAPLKPL-----ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             ccccccCCCcccc-----cccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            9998664432110     111234578999999988764 5889999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2.1e-32  Score=301.94  Aligned_cols=255  Identities=21%  Similarity=0.238  Sum_probs=191.7

Q ss_pred             CccceeeecCceEEEEEEECCeEEEEEEecCC--CCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .+.+.+|.|+++.||++..+++.||||++...  .......+.+|+.+++.++||||+++++++  .+..+++|||+++|
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            34455677788888888888899999998764  223346799999999999999999999987  45789999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++.... ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||.+.......... .
T Consensus        85 ~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~-~  159 (314)
T cd08216          85 SCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ-R  159 (314)
T ss_pred             CHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccc-c
Confidence            9999986432 2458899999999999999999999   899999999999999999999999999887654322111 1


Q ss_pred             ccccccCCCCCCcccCChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc--ccccccC-------
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG--KLKNLLD-------  755 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~--~~~~~ld-------  755 (888)
                      ..........++..|+|||++...  .++.++|||||||++|+|++|..||.............  .....++       
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (314)
T cd08216         160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY  239 (314)
T ss_pred             ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence            111112334578899999999763  58899999999999999999999997554332222111  1000000       


Q ss_pred             ------------------CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 ------------------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ------------------~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                        ......+...+..+.+|+.+||..||.+||++ +++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~l  292 (314)
T cd08216         240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA-SQL  292 (314)
T ss_pred             cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH-HHH
Confidence                              00111122335678999999999999999999 444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.3e-32  Score=294.18  Aligned_cols=246  Identities=27%  Similarity=0.350  Sum_probs=191.9

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL  608 (888)
                      ||.|+||.||++.+.  +..|++|.+.....   .....+.+|++++++++||||+++++.+  ....++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999986  68899999876543   2345788999999999999999999887  3468999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++...   ..+++..+..++.|++.||.|||.   ++++|+||+|+||+++.++.++|+|||++..............
T Consensus        81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  154 (265)
T cd05579          81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD  154 (265)
T ss_pred             HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence            9998533   368999999999999999999999   8999999999999999999999999999876443211100000


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh--H
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ--A  766 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~--~  766 (888)
                      ........++..|++||.+....++.++||||||+++|+|++|..||..............  .     ...++...  +
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~  227 (265)
T cd05579         155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--G-----KIEWPEDVEVS  227 (265)
T ss_pred             cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C-----CcCCCccccCC
Confidence            0111234578899999999888899999999999999999999999976554332211111  0     01122222  5


Q ss_pred             HHHHHHHHHHhhcCCCCCCChHHHHHHHh
Q 002719          767 EQLANLAMRCCEMSRKSRPELGKDVWRVL  795 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~~~~v~~~L  795 (888)
                      ..+.+++.+||+.+|.+||++ ..+.+.|
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~-~~~~~~l  255 (265)
T cd05579         228 DEAIDLISKLLVPDPEKRLGA-KSIEEIK  255 (265)
T ss_pred             HHHHHHHHHHhcCCHhhcCCC-ccHHHHh
Confidence            789999999999999999998 4444433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2.4e-32  Score=293.18  Aligned_cols=232  Identities=25%  Similarity=0.332  Sum_probs=189.2

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL  608 (888)
                      ||.|+||.||++...  +..||+|++......   ....+.+|+.+++.++||||+++++++  ....++||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999987  688999998764322   245789999999999999999999987  3468999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++..   ...+++..+..++.|++.||.|||+   ++++|+||+|+||+++.++.++|+|||++........      
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~------  148 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK------  148 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc------
Confidence            999943   3458899999999999999999999   8999999999999999999999999999886643320      


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHhhcccccccCCCCCCCChhhH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGDWPFVQA  766 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~ld~~~~~~p~~~~  766 (888)
                         .....|++.|++||.+.+..++.++|+||||+++|+|++|..||....  ..........     ......+|...+
T Consensus       149 ---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  220 (262)
T cd05572         149 ---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK-----GNGKLEFPNYID  220 (262)
T ss_pred             ---cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc-----cCCCCCCCcccC
Confidence               112347889999999988889999999999999999999999997655  2221111100     011222344446


Q ss_pred             HHHHHHHHHHhhcCCCCCCCh
Q 002719          767 EQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       767 ~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..+.+++.+||..+|.+||++
T Consensus       221 ~~~~~~i~~~l~~~p~~R~~~  241 (262)
T cd05572         221 KAAKDLIKQLLRRNPEERLGN  241 (262)
T ss_pred             HHHHHHHHHHccCChhhCcCC
Confidence            789999999999999999995

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-32  Score=288.92  Aligned_cols=242  Identities=28%  Similarity=0.442  Sum_probs=197.7

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|.+.+.||+|++|.||++...  +..|++|.+.....  .....+.+|++++++++|||++++++++  ....++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4778889999999999999875  57899999987654  2345789999999999999999999987  3468899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++++|.+++...   ..+++..++.++.|++.||.|||+   +||+||||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            9999999998433   568999999999999999999999   8999999999999999999999999999987654322


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .        .....++..|+|||.+.+..++.++||||||+++|+|++|.+||..............      ......+
T Consensus       155 ~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~  220 (254)
T cd06627         155 D--------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------DDHPPLP  220 (254)
T ss_pred             c--------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------cCCCCCC
Confidence            1        1223578999999999888889999999999999999999999975543322222110      1111233


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...+..+.+++.+||..+|++||++ .++
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~~~-~~~  248 (254)
T cd06627         221 EGISPELKDFLMQCFQKDPNLRPTA-KQL  248 (254)
T ss_pred             CCCCHHHHHHHHHHHhCChhhCcCH-HHH
Confidence            3446789999999999999999999 444

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.6e-32  Score=299.57  Aligned_cols=240  Identities=28%  Similarity=0.387  Sum_probs=189.4

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ..|...+.||+|+||.||+|...  +..||+|.+.......   ...+.+|+.+++.++||||++++++|  .+..++||
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            46888899999999999999875  6889999986543322   24688999999999999999999988  45788999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+. |+|.+++...  ...+++..+..++.|++.||.|||+   .+|+||||+|+||+++.++.+||+|||++......
T Consensus        95 e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607          95 EYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             HhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence            9997 5777766422  3458999999999999999999999   89999999999999999999999999998754321


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                                  ....|++.|+|||++.   .+.++.++||||||+++|+|+||.+||............... .  .+.
T Consensus       169 ------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~--~~~  233 (307)
T cd06607         169 ------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D--SPT  233 (307)
T ss_pred             ------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-C--CCC
Confidence                        1234788999999874   356889999999999999999999999765543322211100 0  000


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                        ..+...+..+.+|+.+||..+|.+||++ .++
T Consensus       234 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i  264 (307)
T cd06607         234 --LSSNDWSDYFRNFVDSCLQKIPQDRPSS-EEL  264 (307)
T ss_pred             --CCchhhCHHHHHHHHHHhcCChhhCcCH-HHH
Confidence              0112245679999999999999999999 444

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.6e-32  Score=305.93  Aligned_cols=246  Identities=20%  Similarity=0.265  Sum_probs=189.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--------C
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--------~  594 (888)
                      .++|...+.||+|+||.||+|...  +..||||.+....  ......+.+|+.+++.++||||++++++|.        .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            467999999999999999999875  6889999986432  222346778999999999999999999873        2


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..|+||||+. ++|.+.+..     .++...+..++.|++.||.|||.   +||+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~  165 (353)
T cd07850          95 DVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  165 (353)
T ss_pred             cEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence            4689999996 588887731     28889999999999999999999   89999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-----
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-----  749 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-----  749 (888)
                      ........         .....|+..|+|||++.+..++.++|||||||++|+|++|+.||...+..........     
T Consensus       166 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  236 (353)
T cd07850         166 RTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTP  236 (353)
T ss_pred             eeCCCCCC---------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            76543211         1223478999999999999999999999999999999999999975442211100000     


Q ss_pred             --------------------------cccccCC-----CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          750 --------------------------LKNLLDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       750 --------------------------~~~~ld~-----~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                                                +......     .....+...+..+.+|+.+||+.||.+||++.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei  308 (353)
T cd07850         237 SDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA  308 (353)
T ss_pred             CHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH
Confidence                                      0000000     0000012345678999999999999999999443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=4.5e-32  Score=298.98  Aligned_cols=250  Identities=27%  Similarity=0.331  Sum_probs=191.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC----CceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~L  598 (888)
                      .++|.+.+.||.|+||.||+|.+.  +..||+|.+.......  ...+.+|+.++++++||||+++++++.    +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            357999999999999999999885  6789999987543221  335678999999999999999999873    35789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+. ++|.+++...  ...+++..++.++.|++.||.|||+   .|++||||||+||+++.++.+||+|||++....
T Consensus        86 v~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            999996 4888887532  2568999999999999999999999   899999999999999999999999999998764


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc-----
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN-----  752 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~-----  752 (888)
                      .....        .+...+++.|+|||.+.+ ..++.++|||||||++|+|++|++||.................     
T Consensus       160 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~  231 (309)
T cd07845         160 LPAKP--------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNES  231 (309)
T ss_pred             CccCC--------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence            32211        122235788999999875 4688999999999999999999999976554332211111000     


Q ss_pred             c---cC------C-CCCCCC--------hhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 L---LD------P-LAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~---ld------~-~~~~~p--------~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .   +.      . .....+        ...+..+.+||.+||+.||.+||++ +++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-~~i  287 (309)
T cd07845         232 IWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATA-EEA  287 (309)
T ss_pred             hchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCH-HHH
Confidence            0   00      0 000000        1135678899999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=5.3e-32  Score=287.94  Aligned_cols=244  Identities=27%  Similarity=0.452  Sum_probs=199.0

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|.+.+.||.|+||.||++.+.  +..|++|.+.....  .....+.+|+++++.++|||++++++.+  .+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4778889999999999999987  68899999876543  3456788999999999999999999877  4578899999


Q ss_pred             cCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          603 LPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       603 ~~ggsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      +++++|.+++.... ....+++..+..++.+++.||.|||+   +|++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999986432 23679999999999999999999999   899999999999999999999999999987654432


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      .        ......|++.|+|||.+.+..++.++||||||+++|+|++|..||............  ......+    .
T Consensus       158 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~----~  223 (258)
T cd08215         158 D--------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI--LKGQYPP----I  223 (258)
T ss_pred             c--------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH--hcCCCCC----C
Confidence            1        112235889999999998888999999999999999999999999765433222111  1111222    2


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      +...+..+.+++.+||..+|.+||++.+
T Consensus       224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  251 (258)
T cd08215         224 PSQYSSELRNLVSSLLQKDPEERPSIAQ  251 (258)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            3344578999999999999999999943

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=5.4e-32  Score=297.35  Aligned_cols=252  Identities=25%  Similarity=0.379  Sum_probs=188.5

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccC----------
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----------  593 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----------  593 (888)
                      ++|....+||+|+||.||+|...  +..||||.+......  ....+.+|+.++++++||||++++++|.          
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            47999999999999999999875  578999988654322  2335678999999999999999999872          


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      ...++||||+. ++|.+.+...  ...+++..++.++.|++.||.|||+   +|++|+||||+||+++.++.+||+|||+
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence            23589999996 5788877432  2468999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN  752 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~  752 (888)
                      +..+.........    ......++..|+|||++.+. .++.++||||||+++|+|+||++||..............+..
T Consensus       166 ~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T cd07865         166 ARAFSLSKNSKPN----RYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG  241 (310)
T ss_pred             cccccCCcccCCC----CccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            9876543221111    11234578899999998765 478899999999999999999999976543221110000000


Q ss_pred             cc--------------------CCCC-----CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          753 LL--------------------DPLA-----GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       753 ~l--------------------d~~~-----~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .+                    ....     ..++......+.+|+.+||..||.+||++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e  303 (310)
T cd07865         242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADT  303 (310)
T ss_pred             CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHH
Confidence            00                    0000     0001122356789999999999999999943

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3.9e-32  Score=293.47  Aligned_cols=241  Identities=20%  Similarity=0.279  Sum_probs=183.4

Q ss_pred             hhcCCCCcccee--eecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceE
Q 002719          525 GATHNFDPSLKI--GEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWT  597 (888)
Q Consensus       525 ~~~~~f~~~~~L--G~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~  597 (888)
                      ...++|.+.+.+  |.|+||.||++...  +..+|+|.+.......     .|+.+...+ +||||++++++|  .+..+
T Consensus        11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence            334456666665  99999999999875  5789999987543221     133333323 799999999987  45789


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-ceeeeccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRF  676 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~  676 (888)
                      +||||+++|+|.+++...   ..+++..++.++.|++.||.|||+   .|++||||||+||+++.++ .++|+|||++..
T Consensus        86 iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            999999999999998533   379999999999999999999999   8999999999999999988 999999999876


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      .....            ...|+..|+|||++.+..++.++|||||||++|+|++|..||............  +..... 
T Consensus       160 ~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~-  224 (267)
T PHA03390        160 IGTPS------------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLES--LLKRQQ-  224 (267)
T ss_pred             cCCCc------------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHH--HHHhhc-
Confidence            53221            224789999999999989999999999999999999999999744322111000  000011 


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .....+...+..+.+++.+||+.+|.+||+..+++
T Consensus       225 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  259 (267)
T PHA03390        225 KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEI  259 (267)
T ss_pred             ccCCcccccCHHHHHHHHHHhccChhhCCchHHHH
Confidence            11112234567899999999999999999642444

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=5.5e-32  Score=295.78  Aligned_cols=250  Identities=24%  Similarity=0.338  Sum_probs=188.1

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~E  601 (888)
                      ++|.....||.|++|.||+|...  ++.||+|.+.....  .....+.+|+.+++.++||||+++++++.  ...++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888999999999999999875  57899999865432  22356889999999999999999999983  57899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeeccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~  680 (888)
                      |++ ++|.+++.... ...+++..+..++.||+.||.|||+   ++++||||+|+||+++. ++.+||+|||++......
T Consensus        82 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         82 YLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             ccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            996 57877774332 2346788889999999999999999   89999999999999985 567999999999755332


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-----cccc
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-----KNLL  754 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~-----~~~l  754 (888)
                      ...        .+...+++.|+|||++.+. .++.++|||||||++|+|+||++||...............     ....
T Consensus       157 ~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  228 (294)
T PLN00009        157 VRT--------FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW  228 (294)
T ss_pred             ccc--------cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            110        1223478999999998764 5789999999999999999999999765443222111000     0000


Q ss_pred             -------C--CCCCC--------CChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          755 -------D--PLAGD--------WPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       755 -------d--~~~~~--------~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                             +  .....        .....+..+.+++.+||+.+|.+||++.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~  281 (294)
T PLN00009        229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA  281 (294)
T ss_pred             cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence                   0  00000        011234678999999999999999999433

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.4e-32  Score=304.89  Aligned_cols=251  Identities=22%  Similarity=0.318  Sum_probs=191.7

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccC------CceE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP------EVWT  597 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~------~~~~  597 (888)
                      .+|.+.+.||.|+||.||+|...  +..||+|.+.....  .....+.+|+.+|+.++||||+++++++.      ...+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            57899999999999999999875  68899999876432  23456788999999999999999998763      3578


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||+. |+|.+++.   ....+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++...
T Consensus        85 lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          85 VVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            9999995 68988884   33458999999999999999999999   89999999999999999999999999999765


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh----------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD----------  746 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----------  746 (888)
                      ........    .......|+..|+|||.+.+ ..++.++|||||||++|+|++|++||...........          
T Consensus       158 ~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         158 SSSPTEHK----YFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             cccCcCCC----cccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            43321111    11123468999999999866 4688999999999999999999999965432211100          


Q ss_pred             -------hcccccccC--CCCCCC-----ChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          747 -------TGKLKNLLD--PLAGDW-----PFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       747 -------~~~~~~~ld--~~~~~~-----p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                             .........  +.....     ....+..+.+++.+||+.+|.+||++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  290 (334)
T cd07855         234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQ  290 (334)
T ss_pred             HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                   000000000  000001     1123578999999999999999999944

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=4.5e-32  Score=294.89  Aligned_cols=231  Identities=27%  Similarity=0.338  Sum_probs=177.6

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHh---cCCCCeeeeeccc--CCceEEEEEecC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSK---IRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~---l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .||+|+||.||++...  ++.||+|.+.......   ...+.+|..++..   .+||||+.+++++  .+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            3899999999999875  5789999987543221   2234455544443   4799999999887  457899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +|+|.+++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.++|+|||++........  
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--  152 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--  152 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--
Confidence            9999998853   3469999999999999999999999   8999999999999999999999999999875432210  


Q ss_pred             CCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcccccccCCCCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~~~~~~~ld~~~~~~p  762 (888)
                              ....|++.|+|||.+.+ ..++.++|||||||++|+|++|..||...... .........     ......+
T Consensus       153 --------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~  219 (279)
T cd05633         153 --------HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TVNVELP  219 (279)
T ss_pred             --------cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-----cCCcCCc
Confidence                    12358999999999864 46899999999999999999999999643211 111111111     1111223


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ...+..+.+++.+||..||.+||+
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         220 DSFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             cccCHHHHHHHHHHhcCCHHHhcC
Confidence            345678999999999999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=4.5e-32  Score=292.96  Aligned_cols=247  Identities=27%  Similarity=0.402  Sum_probs=198.0

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CChhHHHHHHHHHHhcC-CCCeeeeecccC--CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~LV  599 (888)
                      ++|.+...||.|+||.||+|...  +..||+|++.....   .....+.+|+.++++++ ||||+++++++.  +..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            36888899999999999999885  68899999876422   22356889999999998 999999999883  478999


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++++|.+++..   ...+++..++.++.|++.||.|||+   +|++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999999953   3469999999999999999999999   8999999999999999999999999999987654


Q ss_pred             ccccCCC------------ccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 002719          680 NEISSNN------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT  747 (888)
Q Consensus       680 ~~~~~~~------------~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~  747 (888)
                      .......            ..........|+..|+|||.+....++.++||||||+++|++++|+.||............
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  234 (280)
T cd05581         155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI  234 (280)
T ss_pred             ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            3321000            0011123345789999999998888999999999999999999999999866543322111


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      .       .....++...+..+.+|+.+||+.+|.+||++
T Consensus       235 ~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  267 (280)
T cd05581         235 L-------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV  267 (280)
T ss_pred             H-------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence            1       11112333446789999999999999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-33  Score=315.80  Aligned_cols=196  Identities=34%  Similarity=0.541  Sum_probs=170.1

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccCC--------ceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--------VWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--------~~~  597 (888)
                      .|.....||+||||.||+|.++  |..||||.++... ....+...+|+++|++|+|||||+++++-++        ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            3455667999999999999876  6889999998754 3345678899999999999999999987532        357


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc--C--CCceeeecccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--A--NFVSKLSDFGI  673 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~--~--~~~vKL~DFGl  673 (888)
                      +|||||.||||+..|..-.+...|++.+.+.++.+++.||.|||.   +||+||||||.||++-  .  ....||+|||.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            999999999999999877778889999999999999999999999   9999999999999983  2  23679999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALG  736 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~  736 (888)
                      |+-++++..         .++.+||..|++||.+.. +.|+..+|.|||||++|+++||..||-
T Consensus       171 Arel~d~s~---------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  171 ARELDDNSL---------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             cccCCCCCe---------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            998776541         256679999999999984 789999999999999999999999995

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.2e-32  Score=303.36  Aligned_cols=250  Identities=25%  Similarity=0.309  Sum_probs=190.8

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccCC-------c
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------V  595 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-------~  595 (888)
                      .++|.+.+.||+|+||.||+|...  +..||||.+....  ......+.+|+.+++.++||||+++++++..       .
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            357899999999999999999875  6789999987532  2234567889999999999999999998732       3


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .++||||+. ++|.+++.   ....+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++.
T Consensus        84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            689999995 68888884   33569999999999999999999999   899999999999999999999999999998


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--------
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--------  746 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--------  746 (888)
                      ........        .....++..|+|||.+.. ..++.++|||||||++|+|++|++||...........        
T Consensus       157 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  228 (337)
T cd07858         157 TTSEKGDF--------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP  228 (337)
T ss_pred             ccCCCccc--------ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence            65432111        122347889999998865 4688999999999999999999999965432111000        


Q ss_pred             ---------hccccccc-------CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          747 ---------TGKLKNLL-------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       747 ---------~~~~~~~l-------d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                               .......+       .+.........+..+.+|+.+||+.+|.+||++ ++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~-~ell  289 (337)
T cd07858         229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV-EEAL  289 (337)
T ss_pred             ChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCH-HHHH
Confidence                     00000000       000000112345678999999999999999999 4544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-32  Score=292.23  Aligned_cols=248  Identities=27%  Similarity=0.380  Sum_probs=190.4

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC----CceEEEEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYE  601 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~LV~E  601 (888)
                      |.+.+.||.|+||.||+|...  +..||+|.+....  ......+.+|+.+++.++|||++++++++.    ...++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            567789999999999999886  4789999998753  223456889999999999999999999883    46899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++ +|.+++...  ...+++..++.++.|++.||.|||+   +|++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            9974 888887433  2468999999999999999999999   899999999999999999999999999998665432


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-----
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-----  755 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld-----  755 (888)
                      ..       ..+...++..|+|||.+.+ ..++.++||||||+++|+|+||++||....................     
T Consensus       155 ~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         155 SA-------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             cc-------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            10       0122346889999998765 4578999999999999999999999976543322111100000000     


Q ss_pred             ------------CC-------CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          756 ------------PL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       756 ------------~~-------~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                  +.       ...+....+..+.+++.+||..+|.+||++ .++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-~~~  281 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA-DQA  281 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH-HHH
Confidence                        00       000011125678999999999999999999 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=9.1e-32  Score=291.42  Aligned_cols=245  Identities=24%  Similarity=0.316  Sum_probs=185.0

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcC-CCCeeeeecccC----CceEEEEE
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP----EVWTLVYE  601 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~----~~~~LV~E  601 (888)
                      |.+.++||+|+||.||+|...  +..||+|.+...... ......+|+.++.++. ||||+++++++.    +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            567788999999999999875  578999998764322 2234557899999885 999999999873    56899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |++ |+|.+.+...  ...+++..++.++.|++.||.|||+   ++++||||+|+||+++. +.+||+|||++..+....
T Consensus        81 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          81 LMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             cCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            997 5787777432  2468999999999999999999999   89999999999999999 999999999998654322


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc--------c
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK--------N  752 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~--------~  752 (888)
                      ..         ....++..|+|||++.. +.++.++|||||||++|+|++|.+||...+............        .
T Consensus       154 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (282)
T cd07831         154 PY---------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLK  224 (282)
T ss_pred             Cc---------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            11         12347889999997754 557889999999999999999999997654322111100000        0


Q ss_pred             ccC---CCCCCC-----------ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 LLD---PLAGDW-----------PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~ld---~~~~~~-----------p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .+.   .....+           ....+..+.+|+.+||..+|.+||++ +++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~-~~~  276 (282)
T cd07831         225 KFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA-KQA  276 (282)
T ss_pred             hhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCH-HHH
Confidence            000   000001           11345789999999999999999999 444

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=8.9e-32  Score=294.92  Aligned_cols=250  Identities=27%  Similarity=0.364  Sum_probs=191.4

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccCC-------
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------  594 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-------  594 (888)
                      ..++|++...||.|+||.||+|...  +..||||.+.....  .....+.+|+.+++.++||||+++++++.+       
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4567899999999999999999985  57899999875432  223467889999999999999999998732       


Q ss_pred             -----ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeee
Q 002719          595 -----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS  669 (888)
Q Consensus       595 -----~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~  669 (888)
                           ..++|+||+++ +|...+...  ...+++..++.++.|++.||.|||+   +||+||||||+||++++++.+||+
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~  158 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLA  158 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeC
Confidence                 57899999976 676766432  3468999999999999999999999   899999999999999999999999


Q ss_pred             ccccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc
Q 002719          670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG  748 (888)
Q Consensus       670 DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~  748 (888)
                      |||++..........       .....++..|+|||.+.+. .++.++|||||||++|+|++|++||.............
T Consensus       159 dfg~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~  231 (302)
T cd07864         159 DFGLARLYNSEESRP-------YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELIS  231 (302)
T ss_pred             cccccccccCCcccc-------cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            999998665432111       1122467889999988654 57899999999999999999999997654433221111


Q ss_pred             cccc---------c--------cCC-------CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          749 KLKN---------L--------LDP-------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       749 ~~~~---------~--------ld~-------~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ....         +        .++       .... ....+..+.+++.+||..+|.+||++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~  295 (302)
T cd07864         232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEE  295 (302)
T ss_pred             HHhCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            1000         0        000       0001 1123578999999999999999999943

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-32  Score=291.32  Aligned_cols=246  Identities=26%  Similarity=0.335  Sum_probs=191.3

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      |...+.||.|++|.||+|...  +..+++|.+......  ....+.+|+.+|+.++||||+++++++  .+..++||||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            566778999999999999875  678999998764332  345788999999999999999999987  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++ +|.+++...  ...+++..++.++.+++.||.|||.   ++|+|+||||+||+++.++.+||+|||.+.........
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP  154 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence            75 888887543  2568999999999999999999999   89999999999999999999999999998776543210


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---------ccc
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---------KNL  753 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---------~~~  753 (888)
                              .....++..|+|||.+.+. .++.++||||||+++|+|+||++||...+...........         ...
T Consensus       155 --------~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd05118         155 --------YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF  226 (283)
T ss_pred             --------ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence                    1223478899999999876 7899999999999999999999999765543321111000         000


Q ss_pred             cC--------------CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          754 LD--------------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       754 ld--------------~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..              ..........+..+.+++.+||..||.+||++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~  276 (283)
T cd05118         227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ  276 (283)
T ss_pred             hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence            00              0000011124568999999999999999999943

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.2e-31  Score=296.96  Aligned_cols=241  Identities=28%  Similarity=0.380  Sum_probs=188.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .|...+.||+|+||.||+|...  +..||+|.+.......   ...+.+|+.+++.++|||+++++++|  .+..++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            3778889999999999999875  5789999987543222   24688899999999999999999988  346889999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |++ |+|.+++...  ..++++..+..++.+++.||.|||+   ++|+||||+|+||+++.++.+||+|||++...... 
T Consensus       106 ~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         106 YCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-  178 (317)
T ss_pred             CCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence            997 4777776432  3458999999999999999999999   89999999999999999999999999988654321 


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                                 ....|++.|+|||++.   .+.++.++|||||||++|+|++|.+||..............  .....  
T Consensus       179 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~~~--  243 (317)
T cd06635         179 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPT--  243 (317)
T ss_pred             -----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh--ccCCC--
Confidence                       1234788999999984   45688999999999999999999999865433222111110  00000  


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                       ..+...+..+.+|+.+||+.+|.+||++ .++++
T Consensus       244 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~il~  276 (317)
T cd06635         244 -LQSNEWSDYFRNFVDSCLQKIPQDRPTS-EELLK  276 (317)
T ss_pred             -CCCccccHHHHHHHHHHccCCcccCcCH-HHHHh
Confidence             0112334679999999999999999999 55544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-32  Score=289.81  Aligned_cols=233  Identities=24%  Similarity=0.277  Sum_probs=181.3

Q ss_pred             ceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHH-HhcCCCCeeeeecccC--CceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDIL-SKIRHPNLVTLVGACP--EVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL-~~l~HpnIv~l~g~~~--~~~~LV~Ey~~g  605 (888)
                      +.||.|+||.||+|...  ++.||+|++.......   ...+..|..++ ..++||||+++++++.  +..++||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46999999999999874  5789999987543221   12344555444 4458999999999984  578999999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ++|.+++..   ...+++..+..++.|++.||.|||+   .+++||||+|.||+++.++.+||+|||++......     
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----  150 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-----  150 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceecccc-----
Confidence            999999843   3468899999999999999999999   89999999999999999999999999988754321     


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                             ....|++.|+|||.+.+..++.++||||||+++|+|++|.+||...............  ... .....+...
T Consensus       151 -------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~  220 (260)
T cd05611         151 -------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR--RIN-WPEEVKEFC  220 (260)
T ss_pred             -------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--ccC-CCCcccccC
Confidence                   1234788999999998888999999999999999999999999765433221111100  000 011112234


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCh
Q 002719          766 AEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +..+.+++.+||..+|.+||+.
T Consensus       221 ~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         221 SPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             CHHHHHHHHHHccCCHHHccCC
Confidence            5789999999999999999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.5e-32  Score=302.49  Aligned_cols=257  Identities=21%  Similarity=0.292  Sum_probs=195.3

Q ss_pred             cCCCCChhhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeee
Q 002719          514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLV  589 (888)
Q Consensus       514 ~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~  589 (888)
                      +++.....++...+++|.+.+.||+|+||.||+|...  +..||+|.+.....  .....+.+|+.++++++||||++++
T Consensus         3 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~   82 (345)
T cd07877           3 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL   82 (345)
T ss_pred             cchhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence            3445556667778899999999999999999999864  67899999875322  2235678899999999999999999


Q ss_pred             cccC--------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc
Q 002719          590 GACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD  661 (888)
Q Consensus       590 g~~~--------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~  661 (888)
                      +++.        ...+++++++ +++|.+++..    ..+++..+..++.|++.||.|||+   ++|+||||||+||+++
T Consensus        83 ~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~  154 (345)
T cd07877          83 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN  154 (345)
T ss_pred             eeeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEc
Confidence            8762        2367788876 7899888742    358999999999999999999999   8999999999999999


Q ss_pred             CCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchH
Q 002719          662 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKE  740 (888)
Q Consensus       662 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~  740 (888)
                      .++.+||+|||++.......           ....|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.....
T Consensus       155 ~~~~~kl~dfg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~  223 (345)
T cd07877         155 EDCELKILDFGLARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH  223 (345)
T ss_pred             CCCCEEEecccccccccccc-----------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999987543211           12347899999999866 5688999999999999999999999965433


Q ss_pred             HHHHHhhcc--------------------c----ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          741 VQYALDTGK--------------------L----KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       741 ~~~~~~~~~--------------------~----~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .........                    +    .........+.....+..+.+|+.+||+.||.+||+..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e  296 (345)
T cd07877         224 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ  296 (345)
T ss_pred             HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence            221110000                    0    000000000001123467899999999999999999843

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-32  Score=309.00  Aligned_cols=242  Identities=26%  Similarity=0.385  Sum_probs=201.1

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ...+.|.+...||+|.|+.|.+|.+.  +..||||++.+.....  ...+.+|+++|+.|+|||||+++.+.  ...+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            45678999999999999999999775  6889999998875543  34588999999999999999999986  568999


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+.+|.++++|.+..   ...+..+..++.|+..|++|||+   ++|+|||||++||||+.+..+||+|||++..+.
T Consensus       133 V~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec
Confidence            999999999999996443   35568889999999999999999   899999999999999999999999999999876


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLD  755 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~~~~~~~~ld  755 (888)
                      .....         ....|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||++..-...  ....++      
T Consensus       207 ~~~~l---------qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk------  271 (596)
T KOG0586|consen  207 YGLML---------QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK------  271 (596)
T ss_pred             ccccc---------cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee------
Confidence            44321         23459999999999999876 4789999999999999999999986543221  111111      


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                         -..|...+.++.+||+++|-++|.+|+++.+.
T Consensus       272 ---~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi  303 (596)
T KOG0586|consen  272 ---YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI  303 (596)
T ss_pred             ---ecccceeechhHHHHHHhhccCccccCCHHHh
Confidence               12345556789999999999999999998433

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=1.3e-33  Score=335.60  Aligned_cols=247  Identities=26%  Similarity=0.331  Sum_probs=198.0

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~L  598 (888)
                      ..+-++....+||.|.||.||.|...  |.-.|+|-++....  .....+.+|+.+|..|+|||+|++||+-  .+..+|
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence            44557788889999999999999875  56688887765432  2345688999999999999999999975  567899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      .||||.+|+|.+.+.   .+...++.....+..|++.||.|||+   +|||||||||+||||+.+|.+|++|||.|..+.
T Consensus      1312 FMEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred             HHHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEec
Confidence            999999999999994   33446777888899999999999999   999999999999999999999999999999876


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHhhccccccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTGKLKNLL  754 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~-~~~~~~~~~~~~~l  754 (888)
                      .......    ..-...+||+.|||||++.+.   +...+.|||||||+..||+||+.||...+. .......+      
T Consensus      1386 ~~~~~~~----~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~------ 1455 (1509)
T KOG4645|consen 1386 NNAQTMP----GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA------ 1455 (1509)
T ss_pred             CchhcCC----HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh------
Confidence            6531111    122456799999999999753   466789999999999999999999964433 32222222      


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ..-.+..|...+..-.+++.+||+.||+.|.++
T Consensus      1456 ~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~ 1488 (1509)
T KOG4645|consen 1456 AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTA 1488 (1509)
T ss_pred             ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHH
Confidence            122344566678889999999999999999766

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.98  E-value=1e-31  Score=295.32  Aligned_cols=256  Identities=25%  Similarity=0.309  Sum_probs=189.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeecccC---------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP---------  593 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~~---------  593 (888)
                      .++|.+.++||.|+||.||+|.+.  +..||||.+.......  ...+.+|+++++.++||||+++++++.         
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            468999999999999999999875  5789999886543222  346789999999999999999998762         


Q ss_pred             -CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccc
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       594 -~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFG  672 (888)
                       ...++||||+.+ +|...+..  ....+++..+..++.|++.||.|||+   +||+|+||||+|||++.++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence             236899999964 67666642  23469999999999999999999999   899999999999999999999999999


Q ss_pred             cccccccccccCCCc---cccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc
Q 002719          673 ISRFLSQNEISSNNT---TLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG  748 (888)
Q Consensus       673 la~~~~~~~~~~~~~---~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~  748 (888)
                      ++.............   .....+...|++.|+|||.+.+. .++.++|||||||++|+|++|++||.............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~  240 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF  240 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            998654332211100   00112334578899999988654 58899999999999999999999997654432111100


Q ss_pred             ccc---------------cccC-CCCCCCC-------hhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          749 KLK---------------NLLD-PLAGDWP-------FVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       749 ~~~---------------~~ld-~~~~~~p-------~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      ...               ...+ ......+       ......+.+++.+||..+|.+||++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~  303 (311)
T cd07866         241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTAS  303 (311)
T ss_pred             HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHH
Confidence            000               0000 0000001       11225688999999999999999984

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.98  E-value=1.1e-31  Score=286.10  Aligned_cols=243  Identities=30%  Similarity=0.422  Sum_probs=196.4

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|++..+||.|+||.||++...  +..+++|.+......  ....+.+|+.+++.++||||+++++++  ....++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4778889999999999999775  578999998754322  234678899999999999999999887  4578899999


Q ss_pred             cCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          603 LPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       603 ~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      +++++|.+++... .....+++..++.++.+++.||.|||+   .|++|+||+|.||+++.++.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            9999999988542 223568999999999999999999999   899999999999999999999999999998765431


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                       .         ....|++.|++||.+.+..++.++|+||||+++|+|++|++||............  ......    ..
T Consensus       158 -~---------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~~~~~----~~  221 (256)
T cd08530         158 -A---------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV--QRGKYP----PI  221 (256)
T ss_pred             -c---------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--hcCCCC----CC
Confidence             1         1234788999999999888999999999999999999999999766543222111  111111    12


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      +...+..+.+++.+||..+|.+||++ .++
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~-~~~  250 (256)
T cd08530         222 PPIYSQDLQNFIRSMLQVKPKLRPNC-DKI  250 (256)
T ss_pred             chhhCHHHHHHHHHHcCCCcccCCCH-HHH
Confidence            23455789999999999999999999 444

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.98  E-value=9.1e-32  Score=288.33  Aligned_cols=243  Identities=24%  Similarity=0.351  Sum_probs=190.5

Q ss_pred             CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC-----CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV  599 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~-----~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV  599 (888)
                      +|.+.++||+|+||.||++.+..  ..+++|+++....     .....+..|+.+++.++||||+++++++  .+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            47788899999999999998764  3466666554221     1233577899999999999999999988  3468899


Q ss_pred             EEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          600 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      |||+++++|.+++... .....+++..++.++.|++.||.|||+   +|++|+||+|+||+++. +.+||+|||++....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999988542 334579999999999999999999999   89999999999999975 569999999987654


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....        .....|++.|+|||.+.+..++.++|+||||+++|+|++|..||............      .....
T Consensus       157 ~~~~~--------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~  222 (260)
T cd08222         157 GSCDL--------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI------VEGPT  222 (260)
T ss_pred             CCccc--------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH------HcCCC
Confidence            32211        12234788999999998888999999999999999999999999755443322211      11111


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ...+...+..+.+++.+||..+|.+||++.+
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  253 (260)
T cd08222         223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAE  253 (260)
T ss_pred             CCCcchhcHHHHHHHHHHhcCChhhCcCHHH
Confidence            2234455678999999999999999999943

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.98  E-value=4.3e-32  Score=296.06  Aligned_cols=241  Identities=26%  Similarity=0.361  Sum_probs=188.4

Q ss_pred             CCCccceeeecCceEEEEEEE-----CCeEEEEEEecCCCC----CChhHHHHHHHHHHhc-CCCCeeeeecccC--Cce
Q 002719          529 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL----QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW  596 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~-----~~~~VAIK~l~~~~~----~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~  596 (888)
                      +|++.+.||.|+||.||++..     ++..||+|++.....    ...+.+.+|+.+|..+ +||||+++++++.  ...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            477888999999999999876     467899999875322    2235688999999999 5999999998874  467


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||+++++|.+++..   ..++++..+..++.|++.||.|||+   +|++||||+|+|||++.++.+||+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            899999999999999853   3458899999999999999999999   8999999999999999999999999999876


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhccccc
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKN  752 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~  752 (888)
                      ........       .....|+..|+|||.+...  .++.++||||||+++|+|++|..||.......  ..+... ...
T Consensus       155 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~  226 (290)
T cd05613         155 FHEDEVER-------AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR-ILK  226 (290)
T ss_pred             cccccccc-------cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH-hhc
Confidence            54322111       1123588999999998753  47789999999999999999999996432110  111110 000


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                          ....++...+..+.+++.+||+.+|.+||+.
T Consensus       227 ----~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  257 (290)
T cd05613         227 ----SEPPYPQEMSALAKDIIQRLLMKDPKKRLGC  257 (290)
T ss_pred             ----cCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence                1112344456789999999999999999853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=3.2e-32  Score=320.08  Aligned_cols=200  Identities=21%  Similarity=0.267  Sum_probs=153.8

Q ss_pred             hcCCCCccceeeecCceEEEEEEECCe---EEEEEEe--------------cC---CCCCChhHHHHHHHHHHhcCCCCe
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRHM---QVAIKML--------------HP---HSLQGPSEFQQEIDILSKIRHPNL  585 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~---~VAIK~l--------------~~---~~~~~~~~~~~Ei~iL~~l~HpnI  585 (888)
                      ...+|.+...||+|+||+||++.++..   .+++|.+              .+   ........+.+|+.+|++++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            346899999999999999999865421   1222211              00   011123457899999999999999


Q ss_pred             eeeeccc--CCceEEEEEecCCCChhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc
Q 002719          586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD  661 (888)
Q Consensus       586 v~l~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~  661 (888)
                      +++++++  .+..|+|++++. ++|..++....  .........+..|+.||+.||.|||+   +|||||||||+||||+
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence            9999988  457889999985 56777664321  12223456778899999999999999   8999999999999999


Q ss_pred             CCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCC-CCC
Q 002719          662 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP-ALG  736 (888)
Q Consensus       662 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~-Pf~  736 (888)
                      .++.+||+|||+++.+.......       .....||+.|+|||++.+..++.++|||||||+||||++|.. ||.
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~  370 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAF-------DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIG  370 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccc-------cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence            99999999999998764332111       123468999999999999999999999999999999999874 443

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.98  E-value=1.4e-31  Score=293.09  Aligned_cols=247  Identities=25%  Similarity=0.356  Sum_probs=187.1

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcC-CCCeeeeecccC--CceEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~LV~  600 (888)
                      -++|.+...||.|+||.||+|.+.  +..||||.+...... ....+..|+.++.++. ||||++++++|.  ...++||
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            356888999999999999999987  788999998754322 2345667887777764 999999999983  4688999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+. ++|.+++...  ...+++..+..++.+++.||.|||+.  .||+||||+|+||+++.++.+||+|||++..+...
T Consensus        94 e~~~-~~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          94 ELMS-TCLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             eccC-cCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            9985 5777766432  23789999999999999999999972  48999999999999999999999999998765432


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCC----CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGE----LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      ...         ....++..|+|||.+.+..    ++.++||||||+++|+|++|+.||............ .+.... +
T Consensus       169 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~-~  237 (296)
T cd06618         169 KAK---------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK-ILQEEP-P  237 (296)
T ss_pred             Ccc---------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH-HhcCCC-C
Confidence            111         1234788999999987553    788999999999999999999999653221111111 011100 0


Q ss_pred             CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .. ......+..+.+|+.+||..+|.+||++ +++
T Consensus       238 ~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~-~~i  270 (296)
T cd06618         238 SL-PPNEGFSPDFCSFVDLCLTKDHRKRPKY-REL  270 (296)
T ss_pred             CC-CCCCCCCHHHHHHHHHHccCChhhCCCH-HHH
Confidence            00 1111245789999999999999999999 444

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.98  E-value=1.8e-31  Score=297.01  Aligned_cols=252  Identities=21%  Similarity=0.239  Sum_probs=185.5

Q ss_pred             eeeec--CceEEEEEEE--CCeEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          535 KIGEG--GYGSIYKGLL--RHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       535 ~LG~G--~fG~Vy~g~~--~~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .||+|  +||+||++.+  .++.||+|++.......  .+.+.+|+.+++.++||||++++++|  .+..++||||+.++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  9999999987  46899999987543222  35688999999999999999999998  45788999999999


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++.... ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.++++|||.+........... 
T Consensus        85 ~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~-  159 (328)
T cd08226          85 SANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK-  159 (328)
T ss_pred             CHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc-
Confidence            9999886432 2358899999999999999999999   8999999999999999999999999986654332211110 


Q ss_pred             ccccccCCCCCCcccCChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc------------
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN------------  752 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~------------  752 (888)
                      ..........++..|+|||++.+.  .++.++|||||||++|+|++|++||.................            
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd08226         160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE  239 (328)
T ss_pred             ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence            000001112356789999999764  578999999999999999999999975543222211100000            


Q ss_pred             ---------------------------cc-CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 ---------------------------LL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ---------------------------~l-d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                                 .. .......+...+..+.+|+.+||..||.+||++.+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l  306 (328)
T cd08226         240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL  306 (328)
T ss_pred             hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence                                       00 0001111223456899999999999999999994433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=6.2e-32  Score=294.47  Aligned_cols=249  Identities=25%  Similarity=0.335  Sum_probs=192.5

Q ss_pred             CCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCC----CChhHHHHHHHHHHhc-CCCCeeeeecccC--Cce
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL----QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW  596 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~----~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~  596 (888)
                      +|.+.+.||+|+||.||++...     +..||||++.....    .....+.+|+.++.++ +||||+++++.+.  ...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4777889999999999998753     47799999875321    2235688999999999 5999999998873  468


Q ss_pred             EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       597 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ++||||+++|+|.+++..   ...+++..+..++.|++.||.|||+   .+++||||+|.||+++.++.++|+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence            899999999999998843   3458899999999999999999999   8999999999999999999999999999876


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhccccc
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKN  752 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~  752 (888)
                      +......       ......|+..|+|||.+.+..  ++.++||||||+++|+|++|..||......  ...+.......
T Consensus       155 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~  227 (288)
T cd05583         155 FLAEEEE-------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS  227 (288)
T ss_pred             ccccccc-------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc
Confidence            5433211       012235889999999987664  788999999999999999999999643211  11111111111


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                           ....+...+..+.+++.+||+.+|.+||++ ..+...|+
T Consensus       228 -----~~~~~~~~~~~l~~li~~~l~~~p~~R~t~-~~~~~~l~  265 (288)
T cd05583         228 -----KPPFPKTMSAEARDFIQKLLEKDPKKRLGA-NGADEIKN  265 (288)
T ss_pred             -----CCCCCcccCHHHHHHHHHHhcCCHhhccCc-chHHHHhc
Confidence                 112233345779999999999999999998 55555544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.98  E-value=8.5e-32  Score=300.72  Aligned_cols=254  Identities=27%  Similarity=0.382  Sum_probs=191.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCChhHHHHHHHHHHhc-CCCCeeeeecccC----CceE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP----EVWT  597 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~----~~~~  597 (888)
                      .++|.+.+.||+|+||.||+|.+.  +..||+|.+...  .......+.+|+.+++++ +||||++++++|.    ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            457888899999999999999875  578999988643  222334677899999999 9999999999873    2478


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||++ ++|..++..    ..+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++...
T Consensus        86 lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          86 LVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             EEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence            9999997 589888842    268889999999999999999999   89999999999999999999999999999876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-------  749 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-------  749 (888)
                      .........   .......|+..|+|||.+.+ ..++.++|||||||++|+|+||++||..............       
T Consensus       158 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  234 (337)
T cd07852         158 SELEENPEN---PVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA  234 (337)
T ss_pred             ccccccccC---cchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            543321100   11123458999999998765 4678899999999999999999999965433221110000       


Q ss_pred             ----------cccccC----C---CCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          750 ----------LKNLLD----P---LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       750 ----------~~~~ld----~---~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                ...++.    .   .........+..+.+++.+||+.+|.+||++.+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il  293 (337)
T cd07852         235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL  293 (337)
T ss_pred             HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence                      000000    0   00001111457899999999999999999994443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=2e-31  Score=289.62  Aligned_cols=230  Identities=27%  Similarity=0.360  Sum_probs=177.7

Q ss_pred             eeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHH---HHhcCCCCeeeeeccc--CCceEEEEEecC
Q 002719          535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDI---LSKIRHPNLVTLVGAC--PEVWTLVYEYLP  604 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~i---L~~l~HpnIv~l~g~~--~~~~~LV~Ey~~  604 (888)
                      .||+|+||.||++...  ++.||+|.+.......   ...+..|..+   ++...||||+.+++++  .+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            3899999999999765  5789999987643221   1224445443   4445799999999987  457889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      ||+|..++.   ....+++..+..++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||++..+....   
T Consensus        81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---  151 (278)
T cd05606          81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---  151 (278)
T ss_pred             CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence            999999884   33569999999999999999999999   899999999999999999999999999987553221   


Q ss_pred             CCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHhhcccccccCCCCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~-~~~~~~~~~~~ld~~~~~~p  762 (888)
                             .....|+..|+|||.+.++ .++.++|||||||++|+|++|+.||....... ........     .....+|
T Consensus       152 -------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~  219 (278)
T cd05606         152 -------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TMAVELP  219 (278)
T ss_pred             -------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-----ccCCCCC
Confidence                   0123589999999999755 68999999999999999999999997542111 01111100     1112234


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCC
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRP  785 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RP  785 (888)
                      ...+..+.+++.+||..+|.+||
T Consensus       220 ~~~s~~~~~li~~~l~~~p~~R~  242 (278)
T cd05606         220 DSFSPELRSLLEGLLQRDVNRRL  242 (278)
T ss_pred             CcCCHHHHHHHHHHhhcCHHhcc
Confidence            44567899999999999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.98  E-value=1.4e-31  Score=299.91  Aligned_cols=245  Identities=23%  Similarity=0.338  Sum_probs=186.6

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeecccCC--------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE--------  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--------  594 (888)
                      ..+|.....||+|+||.||+|...  +..||||.+.....  .....+.+|+.+++.++||||++++++|..        
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            367889999999999999999864  68899999875322  123468899999999999999999998732        


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      .+++|+||+. ++|..++     ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~-~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQ-TDLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEecccc-cCHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            3589999996 4777655     2358899999999999999999999   89999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc---
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---  750 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~---  750 (888)
                      +......           ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...............   
T Consensus       165 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  233 (342)
T cd07879         165 RHADAEM-----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV  233 (342)
T ss_pred             cCCCCCC-----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            7543211           12347889999999876 46889999999999999999999999765432211110000   


Q ss_pred             --------------ccc---cCC-CCCCC---ChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          751 --------------KNL---LDP-LAGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       751 --------------~~~---ld~-~~~~~---p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                                    ...   ... ....+   ....+..+.+|+.+||+.||.+||++ ++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~-~e~l  295 (342)
T cd07879         234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTA-TEAL  295 (342)
T ss_pred             CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence                          000   000 00000   01234568899999999999999999 4443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.98  E-value=1e-31  Score=298.76  Aligned_cols=251  Identities=24%  Similarity=0.311  Sum_probs=193.8

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccCC-------ceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-------~~~  597 (888)
                      +|.+.+.||.|+||.||+|...  +..||||.+....  ......+.+|+.+++.++||||+++++++..       ..|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4788899999999999999876  5889999987653  2334678999999999999999999998732       578


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +||||++ ++|.+++..   ..++++..++.++.+++.||.|||+   +||+||||||.|||++.++.++|+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999997 588888842   3479999999999999999999999   89999999999999999999999999999876


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc----
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN----  752 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~----  752 (888)
                      .......     .......+++.|+|||++.+. .++.++||||||+++|+|++|++||.................    
T Consensus       154 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  228 (330)
T cd07834         154 DPDEDEK-----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE  228 (330)
T ss_pred             ccccccc-----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence            5432110     011234578999999999887 789999999999999999999999976543321111000000    


Q ss_pred             -------------ccC---C-CC---CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          753 -------------LLD---P-LA---GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       753 -------------~ld---~-~~---~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                                   .+.   . ..   .......+..+.+++.+||+.+|.+||++ ++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~ll  287 (330)
T cd07834         229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITA-DEAL  287 (330)
T ss_pred             hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCH-HHHH
Confidence                         000   0 00   00011235678999999999999999999 4443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.98  E-value=1.2e-31  Score=300.50  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=189.8

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccCC----------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----------  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----------  594 (888)
                      ..+|.+.+.||.|+||.||+|...  +..||+|.+........+.+.+|+.+++.++||||+++++++..          
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            368999999999999999999875  57899999877655556678999999999999999999987632          


Q ss_pred             ------ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc-CCCcee
Q 002719          595 ------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSK  667 (888)
Q Consensus       595 ------~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~-~~~~vK  667 (888)
                            ..++||||+. ++|.+++.    ...+++..++.++.||+.||.|||+   +||+||||||+||+++ .++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEE
Confidence                  3689999997 58888773    2358899999999999999999999   8999999999999997 556889


Q ss_pred             eeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh
Q 002719          668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD  746 (888)
Q Consensus       668 L~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~  746 (888)
                      |+|||++..+........     ......|+..|+|||.+.. ..++.++|||||||++|+|++|+.||...........
T Consensus       156 l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~  230 (342)
T cd07854         156 IGDFGLARIVDPHYSHKG-----YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL  230 (342)
T ss_pred             ECCcccceecCCcccccc-----ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999876533211110     0122357889999998755 4688899999999999999999999975543222111


Q ss_pred             hcccccc------------c------CCCCCCC-----ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          747 TGKLKNL------------L------DPLAGDW-----PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       747 ~~~~~~~------------l------d~~~~~~-----p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .......            .      .......     ....+..+.+|+.+||..||.+||++ .++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~el  297 (342)
T cd07854         231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA-EEA  297 (342)
T ss_pred             HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH-HHH
Confidence            0000000            0      0000000     11234678899999999999999999 444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.98  E-value=2e-31  Score=298.78  Aligned_cols=246  Identities=22%  Similarity=0.322  Sum_probs=189.8

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeecccCC-------
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------  594 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-------  594 (888)
                      ..++|.+.+.||+|+||.||+|...  +..||||.+......  ....+.+|+.+|+.++||||+++++++..       
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            4568999999999999999999875  678999998653222  23468899999999999999999998732       


Q ss_pred             -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       595 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                       .+++||||+ +++|.+++.    ...+++..+..++.|++.||.|||+   +||+||||||+||+++.++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~  164 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL  164 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence             358999999 779988873    2458999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-  751 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~-  751 (888)
                      +.......           ....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||................ 
T Consensus       165 ~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~  233 (343)
T cd07880         165 ARQTDSEM-----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG  233 (343)
T ss_pred             ccccccCc-----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            87543211           12347889999999876 458899999999999999999999997654322211110000 


Q ss_pred             ----------------cccC---CC----CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          752 ----------------NLLD---PL----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       752 ----------------~~ld---~~----~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                                      ....   ..    ........+..+.+++.+||+.||.+||++.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~  295 (343)
T cd07880         234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA  295 (343)
T ss_pred             CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence                            0000   00    000111234568999999999999999999443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.98  E-value=3.1e-31  Score=287.74  Aligned_cols=246  Identities=29%  Similarity=0.378  Sum_probs=187.4

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--hhHHHHHHHHHHhc---CCCCeeeeecccC--Cc-----
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI---RHPNLVTLVGACP--EV-----  595 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l---~HpnIv~l~g~~~--~~-----  595 (888)
                      |++...||.|+||.||+|.+.  +..||+|.+.......  ...+.+|+.++.++   +||||+++++++.  +.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            567789999999999999986  5889999997543221  34567788887766   5999999999883  33     


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .+++|||+. ++|.+++.... ...+++..++.++.|++.||.|||+   ++++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcce
Confidence            789999997 48988885432 2358999999999999999999999   899999999999999999999999999987


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc----
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK----  751 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~----  751 (888)
                      .+......         ....++..|+|||.+.+..++.++|||||||++|+|++|.+||................    
T Consensus       156 ~~~~~~~~---------~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (287)
T cd07838         156 IYSFEMAL---------TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPS  226 (287)
T ss_pred             eccCCccc---------ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCC
Confidence            76432211         12247889999999998899999999999999999999999997655432211110000    


Q ss_pred             ------------cccCCCC----CCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          752 ------------NLLDPLA----GDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       752 ------------~~ld~~~----~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                  .......    .......+..+.+++.+||+.||.+||++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~  280 (287)
T cd07838         227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE  280 (287)
T ss_pred             hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHH
Confidence                        0000000    0001123467889999999999999999943

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.98  E-value=2.4e-32  Score=306.68  Aligned_cols=236  Identities=21%  Similarity=0.378  Sum_probs=183.6

Q ss_pred             cceeeecCceEEEEEEECCeE--EE---EEEecC-CCCCChhHHHHHHHHHHhcCCCCeeeeecccC----CceEEEEEe
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQ--VA---IKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYEY  602 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~--VA---IK~l~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~LV~Ey  602 (888)
                      ...||+|+|-+||+|.+....  ||   +|+-.. ......++|..|+.+|+.|+|||||++|.++.    ....+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            346999999999999987544  33   222111 12223468999999999999999999999883    246789999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeecccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~  681 (888)
                      +..|+|+.|+.+.   ..++...+..|+.||+.||.|||+..| +|||||||.+||||+. -|.|||+|+|||.......
T Consensus       125 ~TSGtLr~Y~kk~---~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  125 FTSGTLREYRKKH---RRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             ccCCcHHHHHHHh---ccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            9999999999544   447788999999999999999999876 8999999999999975 5899999999999876543


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HH--HHHhhcccccccCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE-VQ--YALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-~~--~~~~~~~~~~~ld~~~  758 (888)
                      .          ....|||.|||||++. ..|+...||||||++++||+|+..||..-.. .+  ..+..|....-     
T Consensus       201 a----------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-----  264 (632)
T KOG0584|consen  201 A----------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-----  264 (632)
T ss_pred             c----------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH-----
Confidence            2          2346999999999986 8899999999999999999999999953222 21  11122221111     


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                        +.....+++.+||.+||.. ..+||++.+.|
T Consensus       265 --l~kV~dPevr~fIekCl~~-~~~R~sa~eLL  294 (632)
T KOG0584|consen  265 --LSKVKDPEVREFIEKCLAT-KSERLSAKELL  294 (632)
T ss_pred             --hhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence              1222346799999999999 99999994444

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=1.7e-31  Score=289.70  Aligned_cols=247  Identities=24%  Similarity=0.356  Sum_probs=188.8

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      |.+.+.||.|+||.||+|...  +..|+||.+...... ......+|+..+.+++ ||||+++++++  .+..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            567788999999999999985  578999998754322 2234567999999999 99999999988  45789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                       +|+|.+++.... ...+++..+..++.|++.+|.|||+   ++++|+||+|.||+++.++.++|+|||++........ 
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-  154 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-  154 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence             889998885433 3468999999999999999999999   8999999999999999999999999999876543211 


Q ss_pred             CCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------  750 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~------------  750 (888)
                              .....++..|+|||++.. ..++.++|+||||+++|+|++|++||...............            
T Consensus       155 --------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd07830         155 --------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG  226 (283)
T ss_pred             --------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhH
Confidence                    122347889999998854 45789999999999999999999999755433222111000            


Q ss_pred             -------ccccCCC----CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          751 -------KNLLDPL----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       751 -------~~~ld~~----~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                             ...+...    ........+..+.+++.+||..+|.+||++ +++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei  277 (283)
T cd07830         227 YKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTA-SQA  277 (283)
T ss_pred             hhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCH-HHH
Confidence                   0000000    000011124679999999999999999999 444

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.5e-31  Score=287.75  Aligned_cols=246  Identities=29%  Similarity=0.412  Sum_probs=191.4

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~  603 (888)
                      |+....||+|+||.||+|...  +..||+|++....  ......+..|+.+++.++||||+++++++.  +..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            456678999999999999886  5889999998753  223457889999999999999999999874  4789999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      + ++|.+++....  ..+++..++.++.+++.||.|||+   +||+||||+|+||+++.++.+||+|||++.........
T Consensus        81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT  154 (282)
T ss_pred             C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence            7 58999985332  468999999999999999999999   89999999999999999999999999998765432211


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------  750 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~------------  750 (888)
                              .....++..|+|||.+.+. .++.++|||||||++|+|++|++||...............            
T Consensus       155 --------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07829         155 --------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV  226 (282)
T ss_pred             --------cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence                    1122357889999999776 7899999999999999999999999765543222111000            


Q ss_pred             ------ccccCCC----C-CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          751 ------KNLLDPL----A-GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       751 ------~~~ld~~----~-~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                            .......    . ..++ ..+..+.+++.+||..+|.+||++ .++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~-~~~  276 (282)
T cd07829         227 TKLPDYKPTFPKFPPKDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISA-KEA  276 (282)
T ss_pred             cccccccccccccCccchHHhcc-cccHHHHHHHHHhhccCcccCCCH-HHH
Confidence                  0000000    0 0011 125679999999999999999998 444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=3.5e-32  Score=322.14  Aligned_cols=255  Identities=26%  Similarity=0.379  Sum_probs=188.5

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeeccc-----------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC-----------  592 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-----------  592 (888)
                      ..+|+....||+||||.||++.++  |+.||||++.... ......+.+|+.+|++|+|||||++|..+           
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e  557 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE  557 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence            346888899999999999999765  8999999987654 22235688999999999999999986321           


Q ss_pred             -------------------------------------------------C------------------------------
Q 002719          593 -------------------------------------------------P------------------------------  593 (888)
Q Consensus       593 -------------------------------------------------~------------------------------  593 (888)
                                                                       +                              
T Consensus       558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e  637 (1351)
T KOG1035|consen  558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE  637 (1351)
T ss_pred             ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence                                                             0                              


Q ss_pred             -------------------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 002719          594 -------------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS  642 (888)
Q Consensus       594 -------------------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~  642 (888)
                                                     -..||=||||+..+|.+++..+....  .....|+++.+|+.||.|+|+
T Consensus       638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~  715 (1351)
T KOG1035|consen  638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD  715 (1351)
T ss_pred             CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh
Confidence                                           01356688888877777774332111  356789999999999999999


Q ss_pred             cCCCceeeccccCCcEEEcCCCceeeeccccccccc---cc-------cccCCCccccccCCCCCCcccCChhhhccC--
Q 002719          643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS---QN-------EISSNNTTLCCRTDPKGTFAYMDPEFLASG--  710 (888)
Q Consensus       643 ~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~---~~-------~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--  710 (888)
                         .|||||||||.||||+.+..|||+|||+|....   ..       ............|..+||.-|+|||++.+.  
T Consensus       716 ---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~  792 (1351)
T KOG1035|consen  716 ---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS  792 (1351)
T ss_pred             ---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence               899999999999999999999999999998722   00       000111111234677899999999999765  


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          711 -ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       711 -~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                       .|+.|+|+|||||||+||+.   ||+..-+-...+..  +...--|...++.......-..+|.++++.||.+||++.+
T Consensus       793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~--LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e  867 (1351)
T KOG1035|consen  793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTN--LRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE  867 (1351)
T ss_pred             ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHh--cccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence             49999999999999999985   47654433322222  2222222223444445566789999999999999999955


Q ss_pred             HH
Q 002719          790 DV  791 (888)
Q Consensus       790 ~v  791 (888)
                      .+
T Consensus       868 LL  869 (1351)
T KOG1035|consen  868 LL  869 (1351)
T ss_pred             Hh
Confidence            44

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=2.7e-31  Score=293.02  Aligned_cols=240  Identities=28%  Similarity=0.384  Sum_probs=187.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      .|...+.||+|+||.||+|...  +..||+|.+......   ....+.+|+.+++.++|||++++++++  ....++|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            4777788999999999999875  578999988643222   234678899999999999999999987  456889999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+. |+|.+.+...  ..++++..+..++.+++.||.|||+   ++++||||+|+|||++.++.+||+|||++...... 
T Consensus        96 ~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          96 YCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             ccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence            996 5787776422  3458899999999999999999999   89999999999999999999999999998754321 


Q ss_pred             ccCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                                 ....|++.|+|||.+.   .+.++.++|||||||++|+|++|..||..............  ... +  
T Consensus       169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~-~--  232 (308)
T cd06634         169 -----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NES-P--  232 (308)
T ss_pred             -----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCC-C--
Confidence                       1234788999999985   35678899999999999999999999865443222111110  000 0  


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      ...+...+..+.+|+.+||..+|.+||++ ++++
T Consensus       233 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-~~ll  265 (308)
T cd06634         233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTS-EVLL  265 (308)
T ss_pred             CcCcccccHHHHHHHHHHhhCCcccCCCH-HHHh
Confidence            00122345779999999999999999999 5554

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=3.5e-31  Score=295.41  Aligned_cols=256  Identities=23%  Similarity=0.285  Sum_probs=188.6

Q ss_pred             CCCCc-cceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--------------hhHHHHHHHHHHhcCCCCeeeeec
Q 002719          528 HNFDP-SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--------------PSEFQQEIDILSKIRHPNLVTLVG  590 (888)
Q Consensus       528 ~~f~~-~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--------------~~~~~~Ei~iL~~l~HpnIv~l~g  590 (888)
                      ++|.. ...||.|+||.||+|.+.  ++.||||.+.......              ...+.+|+.+++.++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            35553 466999999999999865  5789999986543221              124778999999999999999999


Q ss_pred             cc--CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceee
Q 002719          591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL  668 (888)
Q Consensus       591 ~~--~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL  668 (888)
                      ++  .+..++||||+. |+|.+++.   ....+++.....++.|++.||.|||+   +||+||||+|+|||++.++.+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEE
Confidence            87  457899999996 68988884   33458999999999999999999999   89999999999999999999999


Q ss_pred             eccccccccccccccCCC------ccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHH
Q 002719          669 SDFGISRFLSQNEISSNN------TTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEV  741 (888)
Q Consensus       669 ~DFGla~~~~~~~~~~~~------~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~  741 (888)
                      +|||++............      ..........+++.|+|||.+.+. .++.++|||||||++|+|++|.+||......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999866522111000      000011223468899999998764 4789999999999999999999999766543


Q ss_pred             HHHHhhccc-cccc-------------CCCCC-------CCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          742 QYALDTGKL-KNLL-------------DPLAG-------DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       742 ~~~~~~~~~-~~~l-------------d~~~~-------~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ......... ....             .+...       ......+..+.+++.+||+.+|.+||++ +++
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-~~~  310 (335)
T PTZ00024        241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA-KEA  310 (335)
T ss_pred             HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH-HHH
Confidence            221110000 0000             00000       0011234678999999999999999999 444

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-32  Score=289.91  Aligned_cols=239  Identities=22%  Similarity=0.308  Sum_probs=194.6

Q ss_pred             cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC---ChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~L  598 (888)
                      ..+|..+..||+|+||.|.+|..++  ..+|||++++....   +.+--..|-.+|... +-|.+++|+.+|  .+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            3478999999999999999998876  45999999876322   223345677777766 468888888888  468999


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ||||+.||+|.-++.   .-+.+.+..+..++.+|+-||-|||+   +|||+||||.+|||||.+|++||+|||+++.--
T Consensus       428 VMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             EEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccc
Confidence            999999999998884   33458888999999999999999999   999999999999999999999999999997422


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      -...  .      .....|||.|+|||++..++|+..+|+|||||+||||+.|++||++.++.........       -.
T Consensus       502 ~~~~--T------TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e-------hn  566 (683)
T KOG0696|consen  502 FDGV--T------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME-------HN  566 (683)
T ss_pred             cCCc--c------eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH-------cc
Confidence            1111  1      1234699999999999999999999999999999999999999998776543322111       11


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      -.+|...+.+...++...|.+.|.+|-.
T Consensus       567 vsyPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  567 VSYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             CcCcccccHHHHHHHHHHhhcCCccccC
Confidence            2467778889999999999999999954

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-32  Score=281.47  Aligned_cols=242  Identities=23%  Similarity=0.402  Sum_probs=191.1

Q ss_pred             hcCCCCcc-ceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccCC------c
Q 002719          526 ATHNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE------V  595 (888)
Q Consensus       526 ~~~~f~~~-~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~------~  595 (888)
                      .+++|.+. .+||-|-.|.|..+..+  +..+|+|++..     .....+|+++.-.. .|||||.++++|.+      .
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            45567654 46999999999988776  56799999863     34678899887666 59999999998843      4


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc---CCCceeeeccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFG  672 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~---~~~~vKL~DFG  672 (888)
                      +.+|||.|+||.|...+..+. ...|++.++..|+.||+.|+.|||+   .+|.||||||+|+|..   .|-.+||+|||
T Consensus       134 LLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccc
Confidence            568999999999999996543 4679999999999999999999999   8999999999999996   45689999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchH------HHHHHh
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALD  746 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~------~~~~~~  746 (888)
                      +|+.-....   ..      ..+.-|+.|.|||++....|+..+|+||+||++|-|++|.|||.....      ....+.
T Consensus       210 FAK~t~~~~---~L------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~  280 (400)
T KOG0604|consen  210 FAKETQEPG---DL------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIR  280 (400)
T ss_pred             cccccCCCc---cc------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhh
Confidence            998654322   11      233469999999999999999999999999999999999999964432      111112


Q ss_pred             hcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          747 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       747 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .|.+    ....++|. ..++...++|+.+|..+|.+|-++ +++
T Consensus       281 ~gqy----~FP~pEWs-~VSe~aKdlIR~LLkt~PteRlTI-~~~  319 (400)
T KOG0604|consen  281 TGQY----EFPEPEWS-CVSEAAKDLIRKLLKTEPTERLTI-EEV  319 (400)
T ss_pred             ccCc----cCCChhHh-HHHHHHHHHHHHHhcCCchhheeH-HHh
Confidence            2211    11223343 457789999999999999999999 444

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=3.2e-31  Score=295.35  Aligned_cols=248  Identities=24%  Similarity=0.306  Sum_probs=190.3

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeeccc---CCc
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEV  595 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~---~~~  595 (888)
                      +-..+++|.+.+.||.|+||.||++...  +..||||.+....  ......+.+|+.+++.++||||++++++|   ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            3446788999999999999999999865  5789999886432  22345788999999999999999999987   246


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .++||||+ +++|..++.    ..++++..+..++.|++.||.|||+   ++|+||||+|.|||++.++.+||+|||++.
T Consensus        85 ~~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~  156 (328)
T cd07856          85 IYFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR  156 (328)
T ss_pred             EEEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence            88999998 568988873    2357888899999999999999999   899999999999999999999999999987


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-------
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-------  747 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~-------  747 (888)
                      ......           ....++..|+|||.+.+ ..++.++|||||||++|+|+||++||............       
T Consensus       157 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~  225 (328)
T cd07856         157 IQDPQM-----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTP  225 (328)
T ss_pred             ccCCCc-----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            532211           12347889999998866 56899999999999999999999999654432111000       


Q ss_pred             ----------cccccccCCC--CCCCC-----hhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          748 ----------GKLKNLLDPL--AGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       748 ----------~~~~~~ld~~--~~~~p-----~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                                ......+...  ....|     ...+..+.+++.+||+.+|.+||++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e  284 (328)
T cd07856         226 PDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE  284 (328)
T ss_pred             CHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence                      0000000000  00011     123578999999999999999999943

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=5.1e-31  Score=293.94  Aligned_cols=249  Identities=24%  Similarity=0.321  Sum_probs=186.6

Q ss_pred             CCCccceeeecCceEEEEEEEC----CeEEEEEEecCCCCC--ChhHHHHHHHHHHhc-CCCCeeeeeccc------CCc
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI-RHPNLVTLVGAC------PEV  595 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l-~HpnIv~l~g~~------~~~  595 (888)
                      +|.+.+.||+|+||.||++...    +..||||.+......  ....+.+|+.+++++ +||||+++++.+      ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4778889999999999999876    457999998653221  235678899999999 599999999864      134


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .+++++|+. ++|.+++.   ....+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            678889885 68988884   34568999999999999999999999   899999999999999999999999999998


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--------
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--------  746 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--------  746 (888)
                      .+........    .......||+.|+|||.+.+ ..++.++|||||||++|+|++|.+||...........        
T Consensus       154 ~~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  229 (332)
T cd07857         154 GFSENPGENA----GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP  229 (332)
T ss_pred             eccccccccc----ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence            6654322111    11123468999999998766 4689999999999999999999999975432111100        


Q ss_pred             ---------hcc-------ccccc-CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          747 ---------TGK-------LKNLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       747 ---------~~~-------~~~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                               ...       ..... .+....++ ..+..+.+|+.+||+.+|.+||++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~R~t~~~  288 (332)
T cd07857         230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFP-NANPLALDLLEKLLAFDPTKRISVEE  288 (332)
T ss_pred             CHHHHHhhhhhhHHHHHHhccccCCcchHhhCC-CCCHHHHHHHHHHccCCcccCCCHHH
Confidence                     000       00000 00000011 12467999999999999999999943

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=3.5e-32  Score=281.10  Aligned_cols=201  Identities=27%  Similarity=0.403  Sum_probs=165.7

Q ss_pred             CCCccceeeecCceEEEEEEECC------eEEEEEEecCCCCCC--hhHHHHHHHHHHhcCCCCeeeeeccc---CCceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC---PEVWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~g~~---~~~~~  597 (888)
                      .|+.+..||+|.||.||+|.-.+      ..+|||.++......  .....+|+.+++.++||||+.|..+|   +...+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            57888899999999999996542      368999998653321  34578999999999999999998887   34688


Q ss_pred             EEEEecCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC----Cceeeecc
Q 002719          598 LVYEYLPNGSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN----FVSKLSDF  671 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~--~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~----~~vKL~DF  671 (888)
                      |++||.+. +|..+++..  .....++...+..|+.||+.|+.|||+   +-|+||||||.|||+..+    |.|||+||
T Consensus       105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999975 788877543  223568889999999999999999999   889999999999999766    99999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCc
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGIT  738 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~  738 (888)
                      |+++.+...-...     ......+-|++|.|||.+.+. .||++.|||++|||+.||+|-.|.|.+.
T Consensus       181 GlaR~~~~plkpl-----~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~  243 (438)
T KOG0666|consen  181 GLARLFNNPLKPL-----ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR  243 (438)
T ss_pred             cHHHHhhcccccc-----ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence            9999886543221     112334569999999999875 6999999999999999999999988543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-32  Score=282.10  Aligned_cols=244  Identities=23%  Similarity=0.375  Sum_probs=191.7

Q ss_pred             ceeeecCceEEEEEE--ECCeEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeeeeecccC--CceEEEEEecCCCCh
Q 002719          534 LKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPNGSL  608 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~--~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~LV~Ey~~ggsL  608 (888)
                      ..||+|+|+.|-.++  .++..+|||++.+.......++.+|++++.+++ |+||++|+.+|.  +.+|||||-|.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            359999999998775  457889999999987777889999999999995 999999999995  479999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC---CceeeeccccccccccccccCC
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      ..+|.++   ..|++.++.++..+|+.||.|||.   +||.||||||+|||....   .-+||+||.+..-+.....-. 
T Consensus       164 LshI~~~---~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s-  236 (463)
T KOG0607|consen  164 LSHIQKR---KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS-  236 (463)
T ss_pred             HHHHHHh---hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC-
Confidence            9999544   459999999999999999999999   999999999999999644   358999999886544332221 


Q ss_pred             CccccccCCCCCCcccCChhhhc---c--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH-----------------
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLA---S--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-----------------  743 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~---~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-----------------  743 (888)
                      .........++|+..|||||+..   +  ..|+.++|.||||||||-||.|.+||.+....+.                 
T Consensus       237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe  316 (463)
T KOG0607|consen  237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE  316 (463)
T ss_pred             CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence            11222345678999999999763   2  3589999999999999999999999965422211                 


Q ss_pred             HHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       744 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      .+.+|++.-    ...+|- ..+....+|+..+|..++.+|-+..+
T Consensus       317 sIQEGkYeF----PdkdWa-hIS~eakdlisnLlvrda~~rlsa~~  357 (463)
T KOG0607|consen  317 SIQEGKYEF----PDKDWA-HISSEAKDLISNLLVRDAKQRLSAAQ  357 (463)
T ss_pred             HHhccCCcC----ChhhhH-HhhHHHHHHHHHHHhccHHhhhhhhh
Confidence            122222111    112232 34667899999999999999998843

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.8e-31  Score=279.68  Aligned_cols=232  Identities=30%  Similarity=0.376  Sum_probs=189.5

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC---ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCCh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL  608 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL  608 (888)
                      ||.|+||.||++...  +..|++|.+......   ....+..|+.+++.++||||+++++.+.  ...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999886  588999998765432   2457889999999999999999999874  468999999999999


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCcc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT  688 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~  688 (888)
                      .+++..   ...+++..+..++.|++.||.|||.   .+++|+||+|+||+++.++.++|+|||++.........     
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~-----  149 (250)
T cd05123          81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR-----  149 (250)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCc-----
Confidence            999843   3368999999999999999999999   89999999999999999999999999998765432210     


Q ss_pred             ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 002719          689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ  768 (888)
Q Consensus       689 ~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~  768 (888)
                         .....++..|++||.+.+..++.++|+||||+++|+|++|..||.............  .     ....++...+..
T Consensus       150 ---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~  219 (250)
T cd05123         150 ---TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL--K-----DPLRFPEFLSPE  219 (250)
T ss_pred             ---ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh--c-----CCCCCCCCCCHH
Confidence               123457889999999988889999999999999999999999997655322111110  0     112234444678


Q ss_pred             HHHHHHHHhhcCCCCCCChH
Q 002719          769 LANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       769 l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      +.+++.+||..||.+||++.
T Consensus       220 l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         220 ARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             HHHHHHHHhcCCHhhCCCcc
Confidence            99999999999999999984

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=3.8e-31  Score=335.49  Aligned_cols=249  Identities=30%  Similarity=0.473  Sum_probs=192.9

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      ..|.....||+|+||.||+|...  +..||||.+.....    ....|+.++++++|||||+++|+|  .+..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            34667788999999999999864  68899999864332    224568999999999999999998  34688999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++.      .++|..+..|+.|++.||.|||.....+|+||||||+||+++.++..++. ||........   
T Consensus       766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~---  835 (968)
T PLN00113        766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD---  835 (968)
T ss_pred             CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC---
Confidence            9999999993      38899999999999999999996444799999999999999998887775 6654332111   


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHhhcccccccC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK--------EVQYALDTGKLKNLLD  755 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--------~~~~~~~~~~~~~~ld  755 (888)
                               ....||+.|+|||++.+..++.++|||||||++|||+||+.||....        +.............++
T Consensus       836 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  906 (968)
T PLN00113        836 ---------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWID  906 (968)
T ss_pred             ---------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeC
Confidence                     12257899999999999999999999999999999999999985321        1111111122222333


Q ss_pred             CCCC---CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          756 PLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       756 ~~~~---~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      +...   ..+......+.+++.+||+.+|.+||++ .++++.|+.+..
T Consensus       907 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~-~evl~~L~~~~~  953 (968)
T PLN00113        907 PSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCA-NDVLKTLESASR  953 (968)
T ss_pred             ccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCH-HHHHHHHHHhhc
Confidence            3221   2233445678899999999999999999 778888887654

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=1e-30  Score=289.13  Aligned_cols=237  Identities=27%  Similarity=0.370  Sum_probs=185.2

Q ss_pred             CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEe
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey  602 (888)
                      |.....||+|+||.||+|...  +..|++|.+.......   ...+.+|+.+++.++|||++++++++.  +..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            566678999999999999874  6789999987543322   245788999999999999999999883  468899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +. |+|.+++...  ..++++..++.++.|++.||.|||+   +|++|+||+|+||+++.++.+||+|||++.....   
T Consensus       103 ~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---  173 (313)
T cd06633         103 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---  173 (313)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence            96 5777777432  3468999999999999999999999   8999999999999999999999999998753221   


Q ss_pred             cCCCccccccCCCCCCcccCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                               .....|+..|+|||++.   .+.++.++|||||||++|+|++|.+||............... . ....  
T Consensus       174 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~-~~~~--  240 (313)
T cd06633         174 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D-SPTL--  240 (313)
T ss_pred             ---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-C-CCCC--
Confidence                     11235889999999984   456889999999999999999999999765433322221111 0 0111  


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                       .....+..+.+|+.+||+.+|.+||++.+
T Consensus       241 -~~~~~~~~l~~li~~~l~~~P~~Rp~~~~  269 (313)
T cd06633         241 -QSNEWTDSFRGFVDYCLQKIPQERPASAE  269 (313)
T ss_pred             -CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence             11123357899999999999999999943

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=4.3e-32  Score=276.17  Aligned_cols=237  Identities=25%  Similarity=0.383  Sum_probs=182.8

Q ss_pred             cceeeecCceEEEEEEECC--eEEEEEEecCCCC-CChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEEEEEecCCC
Q 002719          533 SLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      +..||.|..|.|++..++.  ...|||.+..... ...+++...++++...+ +|+||+.+|+|  +....+.||.|. .
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-T  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-H
Confidence            4459999999999999875  7899999876543 33456778888877664 89999999998  445667888873 3


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCC
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      -++.+|.  .-..++++..+-++...+..||.||...  ++|||||+||+|||||..|.+||+|||++..+-+...    
T Consensus       176 C~ekLlk--rik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA----  247 (391)
T KOG0983|consen  176 CAEKLLK--RIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA----  247 (391)
T ss_pred             HHHHHHH--HhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecccc----
Confidence            4555553  2245699999999999999999999985  6899999999999999999999999999987655432    


Q ss_pred             ccccccCCCCCCcccCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHhhcccccccCCCCCCCC
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITK-EVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~-~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                           .+..+|-+.|||||.+...   .|+.++||||||+.|+||.||+.||.+.+ ++......  +.+ ..|.... .
T Consensus       248 -----htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkv--ln~-ePP~L~~-~  318 (391)
T KOG0983|consen  248 -----HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKV--LNE-EPPLLPG-H  318 (391)
T ss_pred             -----cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHH--Hhc-CCCCCCc-c
Confidence                 1345699999999999643   68899999999999999999999997643 22221111  111 1122111 1


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ...+..+.+++..||.+|+.+||.+
T Consensus       319 ~gFSp~F~~fv~~CL~kd~r~RP~Y  343 (391)
T KOG0983|consen  319 MGFSPDFQSFVKDCLTKDHRKRPKY  343 (391)
T ss_pred             cCcCHHHHHHHHHHhhcCcccCcch
Confidence            1246789999999999999999999

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.3e-31  Score=297.00  Aligned_cols=246  Identities=22%  Similarity=0.305  Sum_probs=189.9

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeecccC--C-----
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--E-----  594 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~-----  594 (888)
                      ..++|.....||.|+||.||+|...  +..||||++....  ......+.+|+.+++.++||||+++++++.  +     
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4568999999999999999999886  5789999986532  122356778999999999999999998763  2     


Q ss_pred             -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       595 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                       ..++|+||+ +++|.+++..    ..+++..++.++.|++.||.|||+   .||+||||||+||+++.++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence             278999998 6799998842    468999999999999999999999   8999999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN  752 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~  752 (888)
                      +.......           ....++..|+|||.+.+. .++.++|||||||++|+|++|++||.................
T Consensus       165 ~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~  233 (343)
T cd07851         165 ARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG  233 (343)
T ss_pred             cccccccc-----------cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Confidence            87653321           123478899999998653 678999999999999999999999975543321111000000


Q ss_pred             c--------------------cCC-CCCCC---ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          753 L--------------------LDP-LAGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 ~--------------------ld~-~~~~~---p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      .                    +.. ....+   ....+..+.+++.+||+.+|.+||++ .+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~-~el  295 (343)
T cd07851         234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITA-AEA  295 (343)
T ss_pred             CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCH-HHH
Confidence            0                    000 00000   01235679999999999999999999 444

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2e-32  Score=297.85  Aligned_cols=238  Identities=22%  Similarity=0.293  Sum_probs=199.5

Q ss_pred             CCccceeeecCceEEEEEEECCeE--EEEEEecCCCC---CChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEEEe
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEY  602 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~~~--VAIK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~Ey  602 (888)
                      +..+..||-||||.|-+...++..  +|+|++++...   ...+++..|-+||..++.|.||+||-.|.+  +.|++||-
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            445567999999999999888655  78898876533   335678899999999999999999999954  68899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      |-||.|...|..   ++.|+..+...++..++.|+.|||.   +|||+|||||+|++|+.+|.+||.|||+|+.+.... 
T Consensus       502 ClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~-  574 (732)
T KOG0614|consen  502 CLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR-  574 (732)
T ss_pred             hcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCC-
Confidence            999999999953   4568889999999999999999999   999999999999999999999999999999876543 


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                        ..      ..+.|||.|.|||++.+...+.++|.||||+++|||+||.|||.+.+........-+.   ++  ...||
T Consensus       575 --KT------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG---id--~i~~P  641 (732)
T KOG0614|consen  575 --KT------WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG---ID--KIEFP  641 (732)
T ss_pred             --ce------eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh---hh--hhhcc
Confidence              12      2345999999999999999999999999999999999999999887765432211111   11  12467


Q ss_pred             hhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ...+....+|+++++..+|.+|--.
T Consensus       642 r~I~k~a~~Lik~LCr~~P~ERLG~  666 (732)
T KOG0614|consen  642 RRITKTATDLIKKLCRDNPTERLGY  666 (732)
T ss_pred             cccchhHHHHHHHHHhcCcHhhhcc
Confidence            7788899999999999999999863

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-32  Score=277.97  Aligned_cols=247  Identities=25%  Similarity=0.293  Sum_probs=188.1

Q ss_pred             ccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEEEEEecCC
Q 002719          532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       532 ~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      ....||.|+||+|++-.++  ++..|||.+..... ....++..|.++..+- +.||||++||++  +...++.||+|. 
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-  146 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-  146 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence            3456999999999998776  67899999987654 3456788898876555 789999999986  446779999994 


Q ss_pred             CChhhhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          606 GSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       606 gsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      .||..+...  ......+++...-.|......||.||...  ..|||||+||+||||+..|.+||||||++..+...-. 
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA-  223 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA-  223 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHHH-
Confidence            566654421  12345688888899999999999999885  5699999999999999999999999999987654321 


Q ss_pred             CCCccccccCCCCCCcccCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                              .+..+|-..|||||.+..  ..|+.+|||||||++|||+.||..|+...+.+...+..-.......-....-
T Consensus       224 --------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~  295 (361)
T KOG1006|consen  224 --------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKE  295 (361)
T ss_pred             --------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccc
Confidence                    234568899999999964  3599999999999999999999999987665443333221111100011111


Q ss_pred             ChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ....+..+..+|..||.+|..+||.+ ..+
T Consensus       296 ~~~~s~~~~~fintCl~Kd~~~Rpky-~~L  324 (361)
T KOG1006|consen  296 CVHYSFSMVRFINTCLIKDRSDRPKY-DDL  324 (361)
T ss_pred             ccccCHHHHHHHHHHhhcccccCcch-hhh
Confidence            23356789999999999999999999 444

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=1.7e-30  Score=314.94  Aligned_cols=143  Identities=29%  Similarity=0.435  Sum_probs=126.6

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~  600 (888)
                      ++|.+.++||+|+||.||+|.+.  ++.||||++.......   ...+..|+.++..++||||+++++++  .+..||||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57889999999999999999987  6889999997643322   25688999999999999999999887  45789999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ||+.|++|.+++..   ...+++..++.|+.||+.||.|||.   ++|+||||||+||||+.++.+||+|||+++.
T Consensus        84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~  153 (669)
T cd05610          84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV  153 (669)
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence            99999999999843   2458889999999999999999999   8999999999999999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-30  Score=297.02  Aligned_cols=248  Identities=25%  Similarity=0.437  Sum_probs=202.4

Q ss_pred             CccceeeecCceEEEEEEEC------CeEEEEEEecCCC-CCChhHHHHHHHHHHhcCCCCeeeeecccC-CceEEEEEe
Q 002719          531 DPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEY  602 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~LV~Ey  602 (888)
                      ...++||.|+||+||+|.|-      +-+||||++.... .....++..|+-+|.+|+|||+++|+|+|. ....||++|
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~  778 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL  778 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence            44568999999999999874      2579999987653 334568999999999999999999999994 457899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.++++.  .+..+..+..+.|..||++|+.|||.   +.++||||-..|||+..-..+||.|||+++.+.....
T Consensus       779 mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~  853 (1177)
T KOG1025|consen  779 MPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK  853 (1177)
T ss_pred             cccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence            999999999964  34568889999999999999999999   8999999999999999999999999999998876543


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~ld~~~~  759 (888)
                      .-.      .....-.+.|||-|.+....|+.++|||||||++||++| |..|+.+...  +...++.+.        .-
T Consensus       854 ey~------~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge--------RL  919 (1177)
T KOG1025|consen  854 EYS------APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE--------RL  919 (1177)
T ss_pred             ccc------ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc--------cC
Confidence            221      122334678999999999999999999999999999998 8888865432  233333322        12


Q ss_pred             CCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..|..++-+++-++.+||-.|+..||.+ +++...+..+
T Consensus       920 sqPpiCtiDVy~~mvkCwmid~~~rp~f-kel~~~fs~~  957 (1177)
T KOG1025|consen  920 SQPPICTIDVYMVMVKCWMIDADSRPTF-KELAEEFSRM  957 (1177)
T ss_pred             CCCCCccHHHHHHHHHHhccCcccCccH-HHHHHHHHHH
Confidence            3467778899999999999999999999 5655555443

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=8.9e-31  Score=302.02  Aligned_cols=253  Identities=28%  Similarity=0.387  Sum_probs=207.7

Q ss_pred             hhhhhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeeccc----
Q 002719          520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC----  592 (888)
Q Consensus       520 ~~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~----  592 (888)
                      ++.+...+..|.+...||.|.||.||+++..  ++.+|+|++..... ..+++..|.++|+.+ +|||++.+||+|    
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            4445566778999999999999999998654  68899999887653 346788899999988 699999999987    


Q ss_pred             ---CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeee
Q 002719          593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS  669 (888)
Q Consensus       593 ---~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~  669 (888)
                         ++.++||||||.|||..|++.... +..+.|..+..|+..++.||.+||.   +.++|||||-.|||++.++.|||+
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEe
Confidence               568999999999999999997655 6779999999999999999999999   889999999999999999999999


Q ss_pred             ccccccccccccccCCCccccccCCCCCCcccCChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Q 002719          670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA  744 (888)
Q Consensus       670 DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~  744 (888)
                      |||++..+.....        .+....||+.|||||++...     .|+..+|+||||++..||.-|.||+.........
T Consensus       166 DFGvSaQldsT~g--------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL  237 (953)
T KOG0587|consen  166 DFGVSAQLDSTVG--------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL  237 (953)
T ss_pred             eeeeeeeeecccc--------cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence            9999987654332        23445699999999999643     4778999999999999999999999776665544


Q ss_pred             HhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          745 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       745 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      +...+-   . |.....|...+.++.++|..||.+|..+||++.+
T Consensus       238 F~IpRN---P-PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~  278 (953)
T KOG0587|consen  238 FLIPRN---P-PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEE  278 (953)
T ss_pred             ccCCCC---C-CccccchhhHHHHHHHHHHHHHhhccccCcchhh
Confidence            332111   1 1111224556789999999999999999999843

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-30  Score=280.35  Aligned_cols=260  Identities=22%  Similarity=0.337  Sum_probs=194.7

Q ss_pred             cCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHh--cCCCCeeeeecccC------CceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP------EVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~g~~~------~~~~L  598 (888)
                      .....+.+.||+|.||.||+|.|+|..||||+|....   ...+.+|.+|.+.  |+|+||+.+++.-.      ..++|
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             hheeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            3456777889999999999999999999999997543   3468888888876  49999999998752      25789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCceeeccccCCcEEEcCCCceeeecccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-----CKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-----~~~~giiHrDLKp~NILl~~~~~vKL~DFGl  673 (888)
                      |.+|-+.|||.|+|.    ...++....++++..+|.||++||.     +..-.|.|||||+.|||+..++.+-|+|+||
T Consensus       287 vTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL  362 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  362 (513)
T ss_pred             eeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence            999999999999994    3568899999999999999999997     2223699999999999999999999999999


Q ss_pred             ccccccccccCCCccccccCCCCCCcccCChhhhccC----CC--CchhhHHHHHHHHHHHHhC----------CCCCCC
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----EL--TPKSDVYSFGIILLRLLTG----------RPALGI  737 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~--s~ksDVwSlGviL~elltG----------~~Pf~~  737 (888)
                      |-.........    ....+..+||.+|||||++...    .+  -..+||||||.|+||++..          ++||..
T Consensus       363 Av~h~~~t~~i----di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd  438 (513)
T KOG2052|consen  363 AVRHDSDTDTI----DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD  438 (513)
T ss_pred             eEEecccCCcc----cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence            98766543211    1223556799999999999643    12  1358999999999999753          367642


Q ss_pred             c----hHHHHHHhhcccccccCCCCCCCCh-hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          738 T----KEVQYALDTGKLKNLLDPLAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       738 ~----~~~~~~~~~~~~~~~ld~~~~~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      .    ...+.....--...+.+.....|.. .....+.+|++.||..||.-|-+. =.+.+.|.++
T Consensus       439 ~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA-LriKKtl~~l  503 (513)
T KOG2052|consen  439 VVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA-LRIKKTLAKL  503 (513)
T ss_pred             CCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH-HHHHHHHHHH
Confidence            2    1222222222222222223333432 234578999999999999999997 4455555544

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=2e-31  Score=290.27  Aligned_cols=238  Identities=27%  Similarity=0.435  Sum_probs=197.1

Q ss_pred             cceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCC
Q 002719          533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG  606 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~gg  606 (888)
                      .+.||.|.||+||-|+++  |+.||||++.+...  .....+.+|+.||++++||.||.|--.|  ++..++|||-+.|.
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            457999999999999876  68899999987533  2346799999999999999999998877  57899999999765


Q ss_pred             ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC---CCceeeecccccccccccccc
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~  683 (888)
                      =|+-+|..  ....|++.....++.||+.||.|||.   ++|+|+||||+||||..   -..+||+|||+|+.+..... 
T Consensus       649 MLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-  722 (888)
T KOG4236|consen  649 MLEMILSS--EKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-  722 (888)
T ss_pred             HHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhh-
Confidence            55555542  34569999999999999999999999   89999999999999964   35899999999999876542 


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              +...+||+.|+|||++..+.|...-|+||.|||+|--|.|..||....+....+....+.....    .|. 
T Consensus       723 --------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~----PW~-  789 (888)
T KOG4236|consen  723 --------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPN----PWS-  789 (888)
T ss_pred             --------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCC----chh-
Confidence                    3456799999999999999999999999999999999999999988777766665544433222    232 


Q ss_pred             hhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      ..+....+||..+|+..-.+|.+..+
T Consensus       790 eis~~AidlIn~LLqVkm~kRysvdk  815 (888)
T KOG4236|consen  790 EISPEAIDLINNLLQVKMRKRYSVDK  815 (888)
T ss_pred             hcCHHHHHHHHHHHHHHHHHhcchHh
Confidence            34567899999999999999998743

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-30  Score=308.80  Aligned_cols=254  Identities=29%  Similarity=0.467  Sum_probs=202.2

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCCCC-ChhHHHHHHHHHHhc-CCCCeeeeecccC
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP  593 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~---------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~  593 (888)
                      ....+..+.+.||.|.||.|++|...         ...||||.++..... ....+..|+++|+.+ .||||+.++|+|.
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t  372 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT  372 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence            33445556668999999999999754         246999999865443 356799999999999 5999999999995


Q ss_pred             --CceEEEEEecCCCChhhhhhccC------CC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcE
Q 002719          594 --EVWTLVYEYLPNGSLEDRLSCKD------NS-------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI  658 (888)
Q Consensus       594 --~~~~LV~Ey~~ggsL~~~L~~~~------~~-------~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NI  658 (888)
                        ...++|+||+..|+|..+|....      ..       ..++....+.++.|||.|+.||++   .++|||||-..||
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNV  449 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNV  449 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhE
Confidence              47889999999999999997554      00       238899999999999999999999   8899999999999


Q ss_pred             EEcCCCceeeeccccccccccccccCCCccccccCCCCC--CcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 002719          659 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG--TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPAL  735 (888)
Q Consensus       659 Ll~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~G--t~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf  735 (888)
                      |+..+..+||+|||+|+..........       ....|  ...|||||.+....|+.++|||||||+||||+| |..||
T Consensus       450 Li~~~~~~kIaDFGlar~~~~~~~y~~-------~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PY  522 (609)
T KOG0200|consen  450 LITKNKVIKIADFGLARDHYNKDYYRT-------KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPY  522 (609)
T ss_pred             EecCCCEEEEccccceeccCCCCceEe-------cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCC
Confidence            999999999999999996554332211       11122  345999999999999999999999999999998 88999


Q ss_pred             CCch---HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          736 GITK---EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       736 ~~~~---~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      .+..   .+...+..|        .....|..++.++++++..||+.+|.+||++ .++.+.++.
T Consensus       523 p~~~~~~~l~~~l~~G--------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F-~~~~~~~~~  578 (609)
T KOG0200|consen  523 PGIPPTEELLEFLKEG--------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTF-SECVEFFEK  578 (609)
T ss_pred             CCCCcHHHHHHHHhcC--------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHHHH
Confidence            7632   221122222        2233466777899999999999999999999 666666655

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.8e-30  Score=275.32  Aligned_cols=216  Identities=24%  Similarity=0.206  Sum_probs=174.2

Q ss_pred             cCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCCCChhhhhhc
Q 002719          539 GGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSC  614 (888)
Q Consensus       539 G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL~~~L~~  614 (888)
                      |.||.||++.+.  ++.||+|.+....     .+.+|...+....||||+++++++  .+..++||||++||+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            899999999875  5789999987543     344566666667899999999987  3578999999999999999853


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCC
Q 002719          615 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD  694 (888)
Q Consensus       615 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~  694 (888)
                      .   ..+++..+..++.|++.||.|||+   ++|+||||||+||+++.++.++|+|||++.......           ..
T Consensus        79 ~---~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----------~~  141 (237)
T cd05576          79 F---LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----------DG  141 (237)
T ss_pred             h---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----------cc
Confidence            3   358999999999999999999999   899999999999999999999999999876543221           12


Q ss_pred             CCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 002719          695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM  774 (888)
Q Consensus       695 ~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~  774 (888)
                      ..++..|+|||.+.+..++.++|||||||++|+|++|++||.......   .        .......|...+..+.+|+.
T Consensus       142 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~li~  210 (237)
T cd05576         142 EAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---N--------THTTLNIPEWVSEEARSLLQ  210 (237)
T ss_pred             CCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---c--------cccccCCcccCCHHHHHHHH
Confidence            235778999999988889999999999999999999998875332110   0        00011233345678999999


Q ss_pred             HHhhcCCCCCCCh
Q 002719          775 RCCEMSRKSRPEL  787 (888)
Q Consensus       775 ~Cl~~dP~~RPs~  787 (888)
                      +||+.||.+||++
T Consensus       211 ~~l~~dp~~R~~~  223 (237)
T cd05576         211 QLLQFNPTERLGA  223 (237)
T ss_pred             HHccCCHHHhcCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-30  Score=282.93  Aligned_cols=255  Identities=27%  Similarity=0.425  Sum_probs=192.5

Q ss_pred             CCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhc--CCCCeeeeecccC------CceEEEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGACP------EVWTLVY  600 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l--~HpnIv~l~g~~~------~~~~LV~  600 (888)
                      .......||+|.||.||+|.+.++.||||++...   ....|++|-+|.+..  .|+||++++++-.      ..+.||+
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             chhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            3455667999999999999999999999999753   345788998888764  7999999999752      2678999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC------CceeeccccCCcEEEcCCCceeeeccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP------HSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~------~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      +|.+.|+|.++|.    ...++|....+|+..+++||+|||.-.+      .+|+|||||+.||||.+++++.|+|||+|
T Consensus       288 ~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  288 EFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             eeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            9999999999994    3458999999999999999999998433      47999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccC-CCC-----chhhHHHHHHHHHHHHhCCCCCC--Cc--------
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELT-----PKSDVYSFGIILLRLLTGRPALG--IT--------  738 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s-----~ksDVwSlGviL~elltG~~Pf~--~~--------  738 (888)
                      ..+........      ....+||.+|||||+|.+. .+.     .+.||||+|.|||||++....+.  ..        
T Consensus       364 l~~~p~~~~~d------~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe  437 (534)
T KOG3653|consen  364 LRLEPGKPQGD------THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE  437 (534)
T ss_pred             EEecCCCCCcc------hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence            98874432211      1236799999999999764 222     36899999999999998654331  10        


Q ss_pred             ---------hHHHHHHhhcccccccCCCCCCCCh-hhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          739 ---------KEVQYALDTGKLKNLLDPLAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       739 ---------~~~~~~~~~~~~~~~ld~~~~~~p~-~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                               .+.+..+...+....   ....|-. .....+.+.+..||+.||+-|-|. .-+.+.+..+..
T Consensus       438 ~evG~hPt~e~mq~~VV~kK~RP~---~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA-~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  438 AEVGNHPTLEEMQELVVRKKQRPK---IPDAWRKHAGMAVLCETIEECWDHDAEARLTA-GCVEERMAELMM  505 (534)
T ss_pred             HHhcCCCCHHHHHHHHHhhccCCC---ChhhhhcCccHHHHHHHHHHHcCCchhhhhhh-HHHHHHHHHHhc
Confidence                     111111111111111   1112211 234578999999999999999998 666666655543

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-30  Score=249.49  Aligned_cols=243  Identities=28%  Similarity=0.383  Sum_probs=190.8

Q ss_pred             CCCccceeeecCceEEEEEEECC--eEEEEEEecCCC--CCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEe
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey  602 (888)
                      +|+...+||+|.||+||+|...+  ..||+|.+....  ..-+....+|+.+|+.+.|.|||++++..  +....+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            46667789999999999998764  679999887543  33367789999999999999999999986  4578899999


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                      |. .+|..++...  ++.++.+....++.|+++||.|+|+   ++++||||||.|+||+.||.+||+|||+++-+.-.. 
T Consensus        83 cd-qdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv-  155 (292)
T KOG0662|consen   83 CD-QDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-  155 (292)
T ss_pred             hh-HHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence            95 4787777433  4568889999999999999999999   899999999999999999999999999999775432 


Q ss_pred             cCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                             .|....+-|.+|.+|.++.+. -|+...|+||-|||+.|+.. |+|.|.+.+..+.....-++..  .+....
T Consensus       156 -------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg--~p~ed~  226 (292)
T KOG0662|consen  156 -------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG--TPTEDQ  226 (292)
T ss_pred             -------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC--CCcccc
Confidence                   233445579999999999876 48899999999999999975 8888987765554443322211  111122


Q ss_pred             CCh---------------h---------hHHHHHHHHHHHhhcCCCCCCCh
Q 002719          761 WPF---------------V---------QAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       761 ~p~---------------~---------~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ||.               .         ....-.+|+.+.+.-+|..|.+.
T Consensus       227 wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisa  277 (292)
T KOG0662|consen  227 WPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISA  277 (292)
T ss_pred             CCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCH
Confidence            221               0         11234788899999999999998

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2e-31  Score=268.32  Aligned_cols=253  Identities=25%  Similarity=0.418  Sum_probs=194.3

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCChhHHHHHHHHHHhcCCCCeeeeecccC---------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP---------  593 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~---------  593 (888)
                      .+.|....+||+|.||.||+|...  ++.||+|++-..  ...-.....+|+++|..|.|+|++.++..|.         
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            345777788999999999999765  567888865432  2223456789999999999999999999882         


Q ss_pred             -CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccc
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       594 -~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFG  672 (888)
                       ..+|+||.+|+. +|..+|.  +....++..++.+++.++..||.|+|.   +.|+|||+||+|+||+.+|.+||+|||
T Consensus        96 r~t~ylVf~~ceh-DLaGlLs--n~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLS--NRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhc--CccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccc
Confidence             138999999975 7888884  334679999999999999999999999   789999999999999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc---
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---  748 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~---  748 (888)
                      +++.+........    ...+..+-|.+|.+||.+.+. .|+++.|||.-|||+.||+||.|.|.+..+.+......   
T Consensus       170 lar~fs~~~n~~k----prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc  245 (376)
T KOG0669|consen  170 LARAFSTSKNVVK----PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC  245 (376)
T ss_pred             cccceecccccCC----CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence            9988765543322    224666789999999999875 79999999999999999999999998766543322111   


Q ss_pred             -ccccc-------------c--CCCCC-C--------CChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          749 -KLKNL-------------L--DPLAG-D--------WPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       749 -~~~~~-------------l--d~~~~-~--------~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                       .+..-             +  .|+.. .        -|..-.....+|+.+++..||.+|++..+
T Consensus       246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~  311 (376)
T KOG0669|consen  246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQ  311 (376)
T ss_pred             ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHh
Confidence             11000             0  01000 0        01122346789999999999999999843

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.1e-30  Score=288.10  Aligned_cols=233  Identities=27%  Similarity=0.386  Sum_probs=186.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccCC--ceEEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLVYE  601 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~--~~~LV~E  601 (888)
                      +..|.+...+|.|+|+.|-.+...  ++..++|++....    ....+|+.++... +||||+++.+.|.+  ..|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            567888888999999999988765  5779999987652    2355677776666 69999999999954  6899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE-cCCCceeeeccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-DANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl-~~~~~vKL~DFGla~~~~~~  680 (888)
                      ++.|+-|.+.+...   +.+. ..+..|+.+|+.|+.|||.   +|+|||||||+|||+ +..++++|+|||.++.....
T Consensus       397 ~l~g~ell~ri~~~---~~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  397 LLDGGELLRRIRSK---PEFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             hccccHHHHHHHhc---chhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            99999888877422   2233 6778899999999999999   899999999999999 68999999999999876544


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                           .      ...+-|..|.|||++....|+.+|||||||++||+||+|+.||...........     .+.   .+.
T Consensus       470 -----~------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~-----~i~---~~~  530 (612)
T KOG0603|consen  470 -----C------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT-----RIQ---MPK  530 (612)
T ss_pred             -----h------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH-----hhc---CCc
Confidence                 1      122358899999999999999999999999999999999999975443311111     111   111


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHH
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGK  789 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~  789 (888)
                      +....+....+|+.+||+.||.+||++.+
T Consensus       531 ~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~  559 (612)
T KOG0603|consen  531 FSECVSDEAKDLLQQLLQVDPALRLGADE  559 (612)
T ss_pred             cccccCHHHHHHHHHhccCChhhCcChhh
Confidence            22455688999999999999999999943

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=1.4e-28  Score=258.15  Aligned_cols=234  Identities=30%  Similarity=0.409  Sum_probs=186.6

Q ss_pred             CceEEEEEEECC--eEEEEEEecCCCCCC-hhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCChhhhhhc
Q 002719          540 GYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSC  614 (888)
Q Consensus       540 ~fG~Vy~g~~~~--~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~~L~~  614 (888)
                      +||.||+|...+  ..|++|++....... ...+.+|+.++++++|+||+++++++.  ...+++|||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            689999999864  889999998765544 678999999999999999999999884  578899999999999999853


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCC
Q 002719          615 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD  694 (888)
Q Consensus       615 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~  694 (888)
                      .   ..+++..++.++.+++.+|.|||.   .+++|+||+|.||+++.++.++|+|||++........         ...
T Consensus        81 ~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~---------~~~  145 (244)
T smart00220       81 R---GRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL---------LTT  145 (244)
T ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc---------ccc
Confidence            2   238899999999999999999999   8999999999999999999999999999987654321         123


Q ss_pred             CCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 002719          695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM  774 (888)
Q Consensus       695 ~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~  774 (888)
                      ..++..|++||.+....++.++||||||+++|+|++|.+||............... ..... . ......+..+.+++.
T Consensus       146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~i~  222 (244)
T smart00220      146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK-PKPPF-P-PPEWKISPEAKDLIR  222 (244)
T ss_pred             ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc-cCCCC-c-cccccCCHHHHHHHH
Confidence            34788999999999888999999999999999999999999763222221111100 00000 0 000014578999999


Q ss_pred             HHhhcCCCCCCChHHHHH
Q 002719          775 RCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       775 ~Cl~~dP~~RPs~~~~v~  792 (888)
                      +||..+|.+||++ .+++
T Consensus       223 ~~l~~~p~~Rp~~-~~~~  239 (244)
T smart00220      223 KLLVKDPEKRLTA-EEAL  239 (244)
T ss_pred             HHccCCchhccCH-HHHh
Confidence            9999999999999 4443

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8e-30  Score=264.95  Aligned_cols=239  Identities=24%  Similarity=0.322  Sum_probs=190.9

Q ss_pred             CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCC---CCChhHHHHHHHHHHhc-CCCCeeeeecccC--CceEEE
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~~LV  599 (888)
                      ++|+.+..||+|+|..|..+.+..  +.+|+|++++.-   ..+..-++.|-.+..+. +||.+|-|..+|.  ..+++|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            478899999999999999987764  679999988742   33345577788887776 7999999999884  478899


Q ss_pred             EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      .||++||+|.-++   .....++++.+..+..+|+.||.|||+   +|||+||||.+|+|||..|++||+|+|+++.--.
T Consensus       330 ieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  330 IEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             EEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            9999999998877   345669999999999999999999999   9999999999999999999999999999985333


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCch-------HHHHHHhhccccc
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK-------EVQYALDTGKLKN  752 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~-------~~~~~~~~~~~~~  752 (888)
                      .+.    .    .....|||.|+|||++.+..|....|+|+|||+++||+.|+.||+...       ..++.+.      
T Consensus       404 ~gd----~----tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq------  469 (593)
T KOG0695|consen  404 PGD----T----TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ------  469 (593)
T ss_pred             CCc----c----cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH------
Confidence            221    1    123469999999999999999999999999999999999999996321       1112111      


Q ss_pred             ccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ++-......|...+-....+++.-|++||++|-.
T Consensus       470 vilekqiriprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  470 VILEKQIRIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHhhhcccccceeehhhHHHHHHhhcCCcHHhcC
Confidence            1111112234455566788999999999999854

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=9.1e-30  Score=271.01  Aligned_cols=249  Identities=27%  Similarity=0.347  Sum_probs=189.0

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCC--C----CeeeeecccC--Cc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--P----NLVTLVGACP--EV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H--p----nIv~l~g~~~--~~  595 (888)
                      .+++|.+..+||+|.||.|-...+.  +..||||+++.-.. -.+...-|+++|.++.+  |    -+|++.++|+  .+
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3678999999999999999999876  46799999875432 23456779999999942  3    3677878874  57


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-------------
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------------  662 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-------------  662 (888)
                      .|||+|.+ |-|+.++|..+ +-.+++...+..|+.|++.+++|||+   .+++|-||||+|||+-+             
T Consensus       166 iCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             eEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCcc
Confidence            88999998 66999999543 34679999999999999999999999   89999999999999921             


Q ss_pred             -------CCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 002719          663 -------NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL  735 (888)
Q Consensus       663 -------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf  735 (888)
                             +..++|+|||.|.......           ...+.|..|.|||++.+-+++.+|||||+||||+|+.||...|
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF  309 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF  309 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence                   2468999999987654432           2345799999999999999999999999999999999999999


Q ss_pred             CCchHHHH-HHhhccccc-------------ccCCCCCCCC-------------------------hhhHHHHHHHHHHH
Q 002719          736 GITKEVQY-ALDTGKLKN-------------LLDPLAGDWP-------------------------FVQAEQLANLAMRC  776 (888)
Q Consensus       736 ~~~~~~~~-~~~~~~~~~-------------~ld~~~~~~p-------------------------~~~~~~l~~Li~~C  776 (888)
                      ......+- ++-+..+..             .+....-+||                         ......|.+|+.+|
T Consensus       310 qtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m  389 (415)
T KOG0671|consen  310 QTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM  389 (415)
T ss_pred             ccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence            65542211 110000000             0000011111                         12345799999999


Q ss_pred             hhcCCCCCCChHHHH
Q 002719          777 CEMSRKSRPELGKDV  791 (888)
Q Consensus       777 l~~dP~~RPs~~~~v  791 (888)
                      |.+||.+|+|+.+.+
T Consensus       390 L~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  390 LEFDPARRITLREAL  404 (415)
T ss_pred             HccCccccccHHHHh
Confidence            999999999996554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=1.6e-28  Score=291.05  Aligned_cols=251  Identities=21%  Similarity=0.219  Sum_probs=162.8

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecc--------
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA--------  591 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~------~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~--------  591 (888)
                      ..++|.+.+.||+|+||.||+|.+.      +..||||.+.....  .+.+..+  .+....+.+++.++..        
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            5678999999999999999999875      45799998764321  1111111  1222223333333222        


Q ss_pred             cCCceEEEEEecCCCChhhhhhccCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeecccc
Q 002719          592 CPEVWTLVYEYLPNGSLEDRLSCKDNS-----------------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK  654 (888)
Q Consensus       592 ~~~~~~LV~Ey~~ggsL~~~L~~~~~~-----------------~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLK  654 (888)
                      .....+|||||+.+++|.+++......                 .......+..|+.||+.||.|||+   ++|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence            134688999999999999988533210                 011233466899999999999999   899999999


Q ss_pred             CCcEEEcC-CCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC----------------------C
Q 002719          655 PANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----------------------E  711 (888)
Q Consensus       655 p~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----------------------~  711 (888)
                      |+||||+. ++.+||+|||+|+.+......       ......||+.|+|||.+...                      .
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~  355 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN  355 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCcccccccccc-------CCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence            99999985 689999999999865432211       11234689999999976432                      2


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhc-----ccccccCCCC-CC------CChhhHHHHHHHHHHHhh
Q 002719          712 LTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTG-----KLKNLLDPLA-GD------WPFVQAEQLANLAMRCCE  778 (888)
Q Consensus       712 ~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~~-----~~~~~ld~~~-~~------~p~~~~~~l~~Li~~Cl~  778 (888)
                      ++.++|||||||+||||+++..+++..... ...+...     .+...+.+.. .+      ..........+|+.+||+
T Consensus       356 ~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~  435 (566)
T PLN03225        356 LPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR  435 (566)
T ss_pred             CCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence            344679999999999999977665422111 0011110     0001111100 00      000112345689999999


Q ss_pred             cCCCCCCChHHHH
Q 002719          779 MSRKSRPELGKDV  791 (888)
Q Consensus       779 ~dP~~RPs~~~~v  791 (888)
                      +||.+||++ +++
T Consensus       436 ~dP~kR~ta-~e~  447 (566)
T PLN03225        436 FKGRQRISA-KAA  447 (566)
T ss_pred             CCcccCCCH-HHH
Confidence            999999999 444

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=8.9e-28  Score=278.45  Aligned_cols=254  Identities=20%  Similarity=0.240  Sum_probs=175.8

Q ss_pred             hcCCCCccceeeecCceEEEEEEE------------------CCeEEEEEEecCCCCCChhH--------------HHHH
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLL------------------RHMQVAIKMLHPHSLQGPSE--------------FQQE  573 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~------------------~~~~VAIK~l~~~~~~~~~~--------------~~~E  573 (888)
                      ..++|.+.++||+|+||.||+|.+                  .++.||||.+..........              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            466899999999999999999964                  23569999987543322222              3347


Q ss_pred             HHHHHhcCCCCe-----eeeecccC----------CceEEEEEecCCCChhhhhhccCC---------------------
Q 002719          574 IDILSKIRHPNL-----VTLVGACP----------EVWTLVYEYLPNGSLEDRLSCKDN---------------------  617 (888)
Q Consensus       574 i~iL~~l~HpnI-----v~l~g~~~----------~~~~LV~Ey~~ggsL~~~L~~~~~---------------------  617 (888)
                      +.++.+++|.++     ++++++|.          ...+|||||+++++|.++|.....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777776554     66777762          347899999999999998863211                     


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCC
Q 002719          618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG  697 (888)
Q Consensus       618 ~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~G  697 (888)
                      ...+++..+..++.|++.+|.|||.   ++|+||||||+|||++.++.+||+|||++..........       .....+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-------~~~g~~  372 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-------PLYGML  372 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-------ccccCC
Confidence            1235677889999999999999999   899999999999999999999999999987554321110       112235


Q ss_pred             CcccCChhhhccCC--------------------C--CchhhHHHHHHHHHHHHhCCC-CCCCchHHHHHHhh--cccc-
Q 002719          698 TFAYMDPEFLASGE--------------------L--TPKSDVYSFGIILLRLLTGRP-ALGITKEVQYALDT--GKLK-  751 (888)
Q Consensus       698 t~~Y~APE~l~~~~--------------------~--s~ksDVwSlGviL~elltG~~-Pf~~~~~~~~~~~~--~~~~-  751 (888)
                      |+.|+|||.+....                    |  ..+.||||+||+||+|++|.. ||............  .... 
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~  452 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR  452 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence            88999999885432                    1  124799999999999999875 66532221111110  0000 


Q ss_pred             -cccCCCCCCC--ChhhHHHHHHHHHHHhhcCC---CCCCChHH
Q 002719          752 -NLLDPLAGDW--PFVQAEQLANLAMRCCEMSR---KSRPELGK  789 (888)
Q Consensus       752 -~~ld~~~~~~--p~~~~~~l~~Li~~Cl~~dP---~~RPs~~~  789 (888)
                       ........++  ....+....+|+.+||..+|   .+|+++.+
T Consensus       453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e  496 (507)
T PLN03224        453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQ  496 (507)
T ss_pred             HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence             0000001111  12235678999999999866   68999943

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=4e-29  Score=287.25  Aligned_cols=245  Identities=28%  Similarity=0.369  Sum_probs=187.7

Q ss_pred             CCCccceeeecCceE-EEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecccC--CceEEEEEecC
Q 002719          529 NFDPSLKIGEGGYGS-IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLP  604 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~-Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~--~~~~LV~Ey~~  604 (888)
                      -|...+.+|.|+.|+ ||+|.+.++.||||.+-...   .....+|+..|+.- +|||||++|+.-.  ...||..|.|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            355566789999875 79999999999999886432   34678999999988 5999999998763  46899999995


Q ss_pred             CCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC---C--Cceeeeccccccccc
Q 002719          605 NGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---N--FVSKLSDFGISRFLS  678 (888)
Q Consensus       605 ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~---~--~~vKL~DFGla~~~~  678 (888)
                       .+|.+++... .......-...+.+..|++.||++||+   .+||||||||.||||+.   +  ..++|+|||+|+.+.
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence             6999999653 111111113457889999999999999   78999999999999975   2  589999999999887


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccccCCC
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      ........     .....||-+|+|||++.....+.++|||||||++|+.++| ..||+.....+..+..+...-  ..+
T Consensus       663 ~~~sS~~r-----~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L--~~L  735 (903)
T KOG1027|consen  663 GGKSSFSR-----LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL--VHL  735 (903)
T ss_pred             CCcchhhc-----ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce--eee
Confidence            65443322     3456799999999999998888899999999999999996 899987665544443333221  111


Q ss_pred             CCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                      ...   .. ....+||.+|++++|..||++.+++
T Consensus       736 ~~~---~d-~eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  736 EPL---PD-CEAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ccC---ch-HHHHHHHHHhcCCCcccCCCHHHHh
Confidence            111   11 1789999999999999999994443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=259.93  Aligned_cols=262  Identities=24%  Similarity=0.374  Sum_probs=207.5

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CChhHHHHHHHHHHhcCCCCeeeeeccc
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC  592 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~  592 (888)
                      .++.....++.....+-+|.||.||.|+|+.       +.|.+|.++.... .....+..|.-.|..+.|||+..+.+++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            3444444567777789999999999998763       3477777765432 2345688899999999999999999988


Q ss_pred             ---CCceEEEEEecCCCChhhhhh-----ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC
Q 002719          593 ---PEVWTLVYEYLPNGSLEDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF  664 (888)
Q Consensus       593 ---~~~~~LV~Ey~~ggsL~~~L~-----~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~  664 (888)
                         .+..+.+|.++.-|+|..+|.     .......++..+...++.|++.|+.|||.   ++|||.||...|++||+..
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQL  433 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhhe
Confidence               346788999999999999997     23344567788899999999999999999   9999999999999999999


Q ss_pred             ceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHH
Q 002719          665 VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY  743 (888)
Q Consensus       665 ~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~  743 (888)
                      ++||+|=.+++.+...++.      |..........||+||.+.+..|+.++|||||||+||||+| |+.|+...+..+.
T Consensus       434 qVkltDsaLSRDLFP~DYh------cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm  507 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYH------CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM  507 (563)
T ss_pred             eEEeccchhccccCccccc------ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence            9999999999876554432      22223345778999999999999999999999999999998 9999976665543


Q ss_pred             HHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccc
Q 002719          744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       744 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l  798 (888)
                      ..-      +.|...-..|..++++|..++.-||...|++||++ +.+..-|..+
T Consensus       508 ~~y------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf-~Qlv~cLseF  555 (563)
T KOG1024|consen  508 EHY------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSF-SQLVICLSEF  555 (563)
T ss_pred             HHH------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCH-HHHHHHHHHH
Confidence            321      22222333577788999999999999999999999 6666665543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=1.5e-28  Score=244.69  Aligned_cols=256  Identities=22%  Similarity=0.394  Sum_probs=193.6

Q ss_pred             CCcCCCCChhhhh-hhcCCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeee
Q 002719          512 PQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVT  587 (888)
Q Consensus       512 ~~~~~~~~~~ei~-~~~~~f~~~~~LG~G~fG~Vy~g~--~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~  587 (888)
                      +..+.+|.--.+. +..++|++.+++|+|.|+.||.|.  .++..++||++++-.   .+.+.+|+.||..|. ||||++
T Consensus        21 p~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~   97 (338)
T KOG0668|consen   21 PREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIK   97 (338)
T ss_pred             chhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeee
Confidence            4445554432222 356789999999999999999997  456889999998643   457999999999997 999999


Q ss_pred             eecccCC----ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-
Q 002719          588 LVGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-  662 (888)
Q Consensus       588 l~g~~~~----~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-  662 (888)
                      |++...+    ...||+||+.+.++..+.      +.|+...+..++.+++.||.|+|+   .||+|||+||.|++||. 
T Consensus        98 L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen   98 LLDIVKDPESKTPSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             hhhhhcCccccCchhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechh
Confidence            9998844    467999999998887765      457788999999999999999999   99999999999999985 


Q ss_pred             CCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCC-CchH
Q 002719          663 NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALG-ITKE  740 (888)
Q Consensus       663 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~-~~~~  740 (888)
                      .-.++|+|+|+|..+......         +-.+.+..|--||.+..- .|+..-|+|||||+|..|+..+.||- +.+.
T Consensus       169 ~rkLrlIDWGLAEFYHp~~eY---------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  169 LRKLRLIDWGLAEFYHPGKEY---------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             hceeeeeecchHhhcCCCcee---------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence            458999999999887654322         223467789999999764 68899999999999999999888873 2222


Q ss_pred             HHHHHhh-------------cccccccCCC---------CCCCC--------hhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          741 VQYALDT-------------GKLKNLLDPL---------AGDWP--------FVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       741 ~~~~~~~-------------~~~~~~ld~~---------~~~~p--------~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                      .+..+..             .+..-.++|.         ...|.        ...+++..+|+.+.|.+|-.+|||+.
T Consensus       240 ~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTak  317 (338)
T KOG0668|consen  240 YDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAK  317 (338)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchH
Confidence            2211111             1111112221         11111        11246789999999999999999983

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=5.4e-28  Score=237.79  Aligned_cols=202  Identities=26%  Similarity=0.347  Sum_probs=161.2

Q ss_pred             hhcCCCCccceeeecCceEEEEE--EECCeEEEEEEecCCCC-CChhHHHHHHHHHHhc-CCCCeeeeeccc--CCceEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g--~~~~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~L  598 (888)
                      ...++......||+|+||.|-+-  ...++-.|+|.+...-. +...++.+|+++..+. .+|.+|.+||..  ....++
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            33445556677999999987544  45578899999876533 2345678888887665 799999999976  346789


Q ss_pred             EEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          599 VYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      .||.|. .||..+..+- ..+..+++..+-+|+..+..||.|||+.  ..+||||+||+||||+.+|++|+||||++..+
T Consensus       123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYL  199 (282)
T ss_pred             eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceee
Confidence            999995 5777655332 4566799999999999999999999995  67999999999999999999999999999877


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCc
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS----GELTPKSDVYSFGIILLRLLTGRPALGIT  738 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~ksDVwSlGviL~elltG~~Pf~~~  738 (888)
                      .++...         +-..|-..|||||.+..    ..|+.++||||||+.+.||.+++.||...
T Consensus       200 ~dSiAk---------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  200 VDSIAK---------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hhhhHH---------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            654321         22347889999999854    37999999999999999999999999643

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=4.2e-28  Score=272.11  Aligned_cols=249  Identities=28%  Similarity=0.360  Sum_probs=204.0

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~E  601 (888)
                      ...+|.....+|.|.||.||++++.  +...|+|+++.....+..-+++|+-+++.++|||||.++|.+  .+..++.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            3457899999999999999999876  578999999988777778899999999999999999999988  568899999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  681 (888)
                      ||.||+|.+..   ....++++.++..++.+.+.||+|||+   .|-+|||||-.|||+++.|.+|++|||.+..+..  
T Consensus        93 ycgggslQdiy---~~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqita--  164 (829)
T KOG0576|consen   93 YCGGGSLQDIY---HVTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--  164 (829)
T ss_pred             ecCCCccccee---eecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhh--
Confidence            99999999977   355789999999999999999999999   8899999999999999999999999998865543  


Q ss_pred             ccCCCccccccCCCCCCcccCChhhh---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFL---ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l---~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                            +...+....||+.|||||+-   ..+.|...||||++|+...|+---++|.......+...-..  ...+++..
T Consensus       165 ------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT--kS~~qpp~  236 (829)
T KOG0576|consen  165 ------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT--KSGFQPPT  236 (829)
T ss_pred             ------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh--ccCCCCCc
Confidence                  23345667899999999977   45689999999999999999998888865444333222211  11222222


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      -.-+....+.+-+|++.|+.++|++||+....
T Consensus       237 lkDk~kws~~fh~fvK~altknpKkRptaekl  268 (829)
T KOG0576|consen  237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKL  268 (829)
T ss_pred             ccCCccchHHHHHHHHHHhcCCCccCCChhhh
Confidence            22233345789999999999999999998543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.94  E-value=6.6e-26  Score=231.41  Aligned_cols=206  Identities=38%  Similarity=0.599  Sum_probs=176.8

Q ss_pred             eeecCceEEEEEEEC--CeEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEEEecCCCChhh
Q 002719          536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED  610 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~Ey~~ggsL~~  610 (888)
                      ||.|++|.||++...  +..+++|++...... ....+.+|+.+++.+.|++|+++++++..  ..+++|||+.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999988  789999998865432 24579999999999999999999999854  7899999999999999


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeeccccccccccccccCCCccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTL  689 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~  689 (888)
                      ++....  ..+++..++.++.+++.+|.+||.   .+++|+||+|.||+++. ++.++|+|||.+........       
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------  148 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------  148 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------
Confidence            985332  468899999999999999999999   89999999999999999 89999999999986654321       


Q ss_pred             cccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 002719          690 CCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ  768 (888)
Q Consensus       690 ~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~  768 (888)
                       ......+...|++||.+... .++.+.|+|+||+++++|                                      ..
T Consensus       149 -~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~  189 (215)
T cd00180         149 -LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PE  189 (215)
T ss_pred             -hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HH
Confidence             01223478899999999887 888999999999999999                                      46


Q ss_pred             HHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          769 LANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       769 l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                      +.+++..|+..+|.+||++ .++++
T Consensus       190 ~~~~l~~~l~~~p~~R~~~-~~l~~  213 (215)
T cd00180         190 LKDLIRKMLQKDPEKRPSA-KEILE  213 (215)
T ss_pred             HHHHHHHHhhCCcccCcCH-HHHhh
Confidence            8999999999999999999 55543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.7e-28  Score=246.95  Aligned_cols=246  Identities=23%  Similarity=0.345  Sum_probs=185.3

Q ss_pred             CCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCChhHHHHHHHHHHhcCCCCeeeeecccC-------CceE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVWT  597 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-------~~~~  597 (888)
                      +.+..+.||-|+||.||..++.  ++.||+|.+..-  +....+.+.+|+.+|.-++|.|++..+++..       +..|
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            4566788999999999998875  688999987643  2233467889999999999999999988762       2457


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~  677 (888)
                      +|.|.+. .+|..++   -....++...+.-+++||++||+|||+   .+|+||||||.|+|++.|..+||+|||+++..
T Consensus       134 V~TELmQ-SDLHKII---VSPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  134 VLTELMQ-SDLHKII---VSPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHHHH-hhhhhee---ccCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence            7888884 5788777   345678889999999999999999999   89999999999999999999999999999976


Q ss_pred             ccccccCCCccccccCCCCCCcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHh----------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD----------  746 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----------  746 (888)
                      .......       .+..+-|.+|.|||++.+. .|+.+.||||.|||+.||+..+..|...+.++...-          
T Consensus       207 e~d~~~h-------MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~  279 (449)
T KOG0664|consen  207 DQRDRLN-------MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ  279 (449)
T ss_pred             chhhhhh-------hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence            6543222       1233458899999999886 699999999999999999999888865544332211          


Q ss_pred             -------hcccccccCC--CCCCC--------ChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          747 -------TGKLKNLLDP--LAGDW--------PFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       747 -------~~~~~~~ld~--~~~~~--------p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                             +|....++..  ..++.        +.........++..++..||.+|.+..
T Consensus       280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~  338 (449)
T KOG0664|consen  280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVE  338 (449)
T ss_pred             HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHh
Confidence                   1111111110  01111        111223567788889999999998873

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=2.4e-27  Score=258.99  Aligned_cols=198  Identities=25%  Similarity=0.333  Sum_probs=168.9

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcC------CCCeeeeeccc--CCc
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR------HPNLVTLVGAC--PEV  595 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~------HpnIv~l~g~~--~~~  595 (888)
                      ...+|.+....|+|-|++|.+|.+.  +..||||++.++... .+.=+.|++||++|+      --|+++|+-.|  ..+
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            4567888888999999999999876  578999999865322 234568999999995      34788888877  568


Q ss_pred             eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeeccccc
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGIS  674 (888)
Q Consensus       596 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFGla  674 (888)
                      +|||||-+ ..+|.++|.+...+..|....+..++.|+..||..|..   .||+|.||||+|||++++ ..+||||||.|
T Consensus       509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA  584 (752)
T KOG0670|consen  509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSA  584 (752)
T ss_pred             eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCccc
Confidence            99999998 57999999888888889999999999999999999999   689999999999999864 58899999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT  738 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~  738 (888)
                      .....+...+.          .-+..|.|||++.+.+|+...|+||.||+||||.||+..|.+.
T Consensus       585 ~~~~eneitPY----------LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  585 SFASENEITPY----------LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             cccccccccHH----------HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            88776554322          2356899999999999999999999999999999999999754

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=3.5e-27  Score=260.82  Aligned_cols=193  Identities=24%  Similarity=0.409  Sum_probs=165.1

Q ss_pred             CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC--------CChhHHHHHHHHHHhcC---CCCeeeeecccC-
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--------QGPSEFQQEIDILSKIR---HPNLVTLVGACP-  593 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~--------~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~-  593 (888)
                      .+|.....||.|+||.|++++++.  ..|+||.+.+...        .....+-.|+.||..|+   |+||++++++|+ 
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            468899999999999999999874  6799999876532        11234667999999997   999999999995 


Q ss_pred             -CceEEEEEec-CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecc
Q 002719          594 -EVWTLVYEYL-PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       594 -~~~~LV~Ey~-~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DF  671 (888)
                       +++||+||-- +|.+|.+++   ...+.+++.+...|+.|++.|+++||+   .||||||||-+|+.++.+|.+||+||
T Consensus       641 dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidf  714 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDF  714 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeec
Confidence             4788999874 667999999   456779999999999999999999999   89999999999999999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCCCcccCChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALG  736 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~ksDVwSlGviL~elltG~~Pf~  736 (888)
                      |.|.+......          ...+||..|.|||++.+..| +..-|||++|++||.++....||.
T Consensus       715 gsaa~~ksgpf----------d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  715 GSAAYTKSGPF----------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cchhhhcCCCc----------ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            99876654321          23569999999999998876 466899999999999999998884

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=2.4e-25  Score=231.68  Aligned_cols=196  Identities=37%  Similarity=0.553  Sum_probs=167.3

Q ss_pred             CCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC-ChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP  604 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~  604 (888)
                      |.+...||.|++|.||+|...+  ..+++|.+...... ....+.+|+..+..++|+|++++++++.  +..++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            5567889999999999998864  88999999876544 5678999999999999999999999874  57899999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccC
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS  684 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~  684 (888)
                      +++|.+++.....  .+++..+..++.+++.+|.+||.   ++++|+||+|.||+++.++.++|+|||++......... 
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-  154 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-  154 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence            9999999853321  17899999999999999999999   79999999999999999999999999999876543200 


Q ss_pred             CCccccccCCCCCCcccCChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 002719          685 NNTTLCCRTDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPALGI  737 (888)
Q Consensus       685 ~~~~~~~~~~~~Gt~~Y~APE~l-~~~~~s~ksDVwSlGviL~elltG~~Pf~~  737 (888)
                            ......++..|++||.+ ....++.++|||+||+++|+|++|++||..
T Consensus       155 ------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      155 ------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                  01223478899999999 666788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.3e-25  Score=242.96  Aligned_cols=129  Identities=23%  Similarity=0.353  Sum_probs=109.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcC-----C---CCeeeeeccc----
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----H---PNLVTLVGAC----  592 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-----H---pnIv~l~g~~----  592 (888)
                      .++|.+.++||.|.|++||++.+.  .+.||+|+.+... .-.+....||.+|++++     |   .+||+|++.|    
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            468999999999999999999887  4789999987432 22456788999999983     3   4799999998    


Q ss_pred             --CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEE
Q 002719          593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL  660 (888)
Q Consensus       593 --~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl  660 (888)
                        ..+.|+|+|++ |.+|..+|..... ..++...+..|+.||+.||.|||..  .||||-||||+|||+
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL  221 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence              23789999999 7789888865543 4589999999999999999999995  589999999999999

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.93  E-value=6.6e-26  Score=236.55  Aligned_cols=245  Identities=21%  Similarity=0.264  Sum_probs=186.5

Q ss_pred             cCCCCccceeeecCceEEEEEEE--CCeEEEEEEecCC--CCCChhHHHHHHHHHHhcCCCCeeeeecccCC--------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--------  594 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~--~~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--------  594 (888)
                      ..+|.....+|.|.- .|..+.+  .+.+||||.+...  .....++..+|..++..++|+||++++.+|..        
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            456777888999988 5655544  3789999987543  22234578899999999999999999999822        


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..|+|||||. ++|...+.     -.++-.++..|+.|+++|++|||+   .||+||||||+||++..+..+||.|||+|
T Consensus        95 e~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   95 EVYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             hHHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhh
Confidence            5789999995 68888774     346677899999999999999999   89999999999999999999999999999


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-------
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-------  747 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~-------  747 (888)
                      +.....         ...+..+.|..|.|||++.+-.|...+||||+||++.||++|.-.|.+....+.....       
T Consensus       166 r~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp  236 (369)
T KOG0665|consen  166 RTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP  236 (369)
T ss_pred             cccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence            865432         1234556899999999999888999999999999999999999988755432211110       


Q ss_pred             -----------c-------------ccccccC----CCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          748 -----------G-------------KLKNLLD----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       748 -----------~-------------~~~~~ld----~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                                 +             .+...+.    +...+.+...+..+.+|+.+||-.||++|.+. +++
T Consensus       237 d~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv-~da  307 (369)
T KOG0665|consen  237 DPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISV-DDA  307 (369)
T ss_pred             CHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccH-HHH
Confidence                       0             0000000    00011122334568999999999999999998 444

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=2.8e-25  Score=240.03  Aligned_cols=200  Identities=29%  Similarity=0.430  Sum_probs=162.6

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWT  597 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~  597 (888)
                      ..+.|...++||.|.|++||++++.     ...||+|.+...+  .+..+.+|+++|..+. +.||+++.+++  .+...
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            3456888899999999999999764     3679999987653  4678999999999995 89999999998  57899


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-CCceeeeccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRF  676 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~  676 (888)
                      +||||++.....+++.      .++...+..++..++.||.++|.   +|||||||||.|+|.+. -+.-.|.|||+|..
T Consensus       112 ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  112 IVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             EEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHH
Confidence            9999999999999882      46788999999999999999999   99999999999999984 46778999999972


Q ss_pred             ccccc------------ccC------------------------CCccccccCCCCCCcccCChhhhccC-CCCchhhHH
Q 002719          677 LSQNE------------ISS------------------------NNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVY  719 (888)
Q Consensus       677 ~~~~~------------~~~------------------------~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~ksDVw  719 (888)
                      .....            ...                        +...........||++|.|||++... ..++++|||
T Consensus       183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw  262 (418)
T KOG1167|consen  183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW  262 (418)
T ss_pred             HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence            21110            000                        00001122345799999999999764 578999999


Q ss_pred             HHHHHHHHHHhCCCCCC
Q 002719          720 SFGIILLRLLTGRPALG  736 (888)
Q Consensus       720 SlGviL~elltG~~Pf~  736 (888)
                      |.|||++.+++++.||-
T Consensus       263 s~GVI~Lslls~~~PFf  279 (418)
T KOG1167|consen  263 SAGVILLSLLSRRYPFF  279 (418)
T ss_pred             eccceeehhhccccccc
Confidence            99999999999999983

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=221.92  Aligned_cols=236  Identities=22%  Similarity=0.317  Sum_probs=176.9

Q ss_pred             cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeeeeecc-c--CCceEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA-C--PEVWTLVY  600 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~-~--~~~~~LV~  600 (888)
                      .+.|++.+.||+|.||.+.++.+++  +.+++|.+.... ....+|.+|...--.| .|.||+.-|+. |  .+.+.+++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            3569999999999999999999885  679999886543 3467899998765555 48999988875 3  45777899


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc--CCCceeeeccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFVSKLSDFGISRFLS  678 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~--~~~~vKL~DFGla~~~~  678 (888)
                      ||+|.|+|..-+.    ...+.+....+++.|++.||.|+|+   +++||||||.+||||-  +...+||+|||+.+..+
T Consensus       102 E~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  102 EFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             ccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            9999999998773    3457888899999999999999999   8999999999999993  44589999999987544


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCchH-----HH-HHHhh
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQ-YALDT  747 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~-----~~-~~~~~  747 (888)
                      ....           ...-+..|.+||.+...     ...+.+|||.||+|+|.++||.+||.....     .. ..+..
T Consensus       175 ~tV~-----------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~  243 (378)
T KOG1345|consen  175 TTVK-----------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK  243 (378)
T ss_pred             ceeh-----------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc
Confidence            3211           11246789999987542     246789999999999999999999963211     11 11222


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCC
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs  786 (888)
                      ++...     .+..-...++.+..+.++-|..+|++|=-
T Consensus       244 rk~~~-----~P~~F~~fs~~a~r~Fkk~lt~~~~drck  277 (378)
T KOG1345|consen  244 RKNPA-----LPKKFNPFSEKALRLFKKSLTPRFKDRCK  277 (378)
T ss_pred             ccCcc-----CchhhcccCHHHHHHHHHhcCCcccccch
Confidence            22211     11111223467888999999999999943

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=2.8e-24  Score=266.56  Aligned_cols=198  Identities=16%  Similarity=0.189  Sum_probs=137.9

Q ss_pred             hcCC-CCeeeeeccc---------CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce
Q 002719          579 KIRH-PNLVTLVGAC---------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI  648 (888)
Q Consensus       579 ~l~H-pnIv~l~g~~---------~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~gi  648 (888)
                      .++| +||+.++++|         .+.++++|||+ +++|.++|..  ....+++..++.|+.||+.||.|||+   +||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~gI  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHS---QGI  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            4556 6888888877         12466788887 6699999953  23569999999999999999999999   899


Q ss_pred             eeccccCCcEEEcC-------------------CCceeeecccccccccccccc--------CCCccccccCCCCCCccc
Q 002719          649 VHGDLKPANILLDA-------------------NFVSKLSDFGISRFLSQNEIS--------SNNTTLCCRTDPKGTFAY  701 (888)
Q Consensus       649 iHrDLKp~NILl~~-------------------~~~vKL~DFGla~~~~~~~~~--------~~~~~~~~~~~~~Gt~~Y  701 (888)
                      +||||||+||||+.                   ++.+||+|||+++........        .............||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            99999999999964                   345566666666542210000        000000001224589999


Q ss_pred             CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCC
Q 002719          702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR  781 (888)
Q Consensus       702 ~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP  781 (888)
                      +|||++.+..|+.++|||||||+||||++|.+|+.........+...    .+++.   + .........++.+||+.+|
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~----~~~~~---~-~~~~~~~~~~~~~~L~~~P  253 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR----VLPPQ---I-LLNWPKEASFCLWLLHPEP  253 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh----hcChh---h-hhcCHHHHHHHHHhCCCCh
Confidence            99999999999999999999999999999999885433222111111    11110   0 1112346788999999999


Q ss_pred             CCCCChHHH
Q 002719          782 KSRPELGKD  790 (888)
Q Consensus       782 ~~RPs~~~~  790 (888)
                      .+||++.+.
T Consensus       254 ~~Rps~~ei  262 (793)
T PLN00181        254 SCRPSMSEL  262 (793)
T ss_pred             hhCcChHHH
Confidence            999999544

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=4e-23  Score=208.34  Aligned_cols=164  Identities=23%  Similarity=0.257  Sum_probs=122.7

Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |+|.+++...  ..++++..++.|+.|++.||.|||+   ++      ||+|||++.++.+|+  ||++.......    
T Consensus         1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----   63 (176)
T smart00750        1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----   63 (176)
T ss_pred             CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc----
Confidence            6899998532  3569999999999999999999999   55      999999999999999  99987654321    


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--cccccccCCCCCCCCh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLDPLAGDWPF  763 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~--~~~~~~ld~~~~~~p~  763 (888)
                               ..||+.|+|||++.+..++.++|||||||++|||+||++||............  ..... ..+.....+.
T Consensus        64 ---------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  133 (176)
T smart00750       64 ---------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA-DDPRDRSNLE  133 (176)
T ss_pred             ---------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-CCccccccHH
Confidence                     14899999999999999999999999999999999999999654332111111  00111 1111111122


Q ss_pred             hhHH--HHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          764 VQAE--QLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       764 ~~~~--~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      ....  .+.+++.+||..+|.+||++ .+++..+..
T Consensus       134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~-~~ll~~~~~  168 (176)
T smart00750      134 SVSAARSFADFMRVCASRLPQRREAA-NHYLAHCRA  168 (176)
T ss_pred             HHHhhhhHHHHHHHHHhcccccccCH-HHHHHHHHH
Confidence            2233  69999999999999999999 566555543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.89  E-value=3.3e-22  Score=222.33  Aligned_cols=263  Identities=23%  Similarity=0.288  Sum_probs=196.3

Q ss_pred             CCCccceeeecCceEEEEEEECC---eEEEEEEecCCCCCChhHHHHHHHHHHhcCC----CCeeeeeccc---CCceEE
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH----PNLVTLVGAC---PEVWTL  598 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~---~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H----pnIv~l~g~~---~~~~~L  598 (888)
                      +|.+.++||+|+||.||.+....   ..+|+|............+..|+.+|..+..    +++..+++..   ....++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999999998765   3699998876544444478899999999973    5788887766   346789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-----Cceeeecccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-----FVSKLSDFGI  673 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-----~~vKL~DFGl  673 (888)
                      ||+.+ |.+|.++..... ...++..+.+.|+.|++.+|.+||+   .|++||||||.|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99988 889999774443 5679999999999999999999999   899999999999999754     4699999999


Q ss_pred             cc--ccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcc
Q 002719          674 SR--FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGK  749 (888)
Q Consensus       674 a~--~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~  749 (888)
                      ++  .+...................||..|+++....+...+.+.|+||++.++.+++.|..||......  ...+....
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~  253 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP  253 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence            98  332222111000001123456999999999999999999999999999999999999999544321  11111111


Q ss_pred             cccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccccc
Q 002719          750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       750 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~~  801 (888)
                      .......    .....+..+..+...+-..+...+|.. ..+...|......
T Consensus       254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy-~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDY-EKLAELLKDVFDS  300 (322)
T ss_pred             hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCH-HHHHHHHHHHHHh
Confidence            1111111    222334677888888888999999999 6676776655443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=1.1e-22  Score=226.99  Aligned_cols=173  Identities=16%  Similarity=0.127  Sum_probs=131.3

Q ss_pred             hhhhcCCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCC-----CChhHHHHHHHHHHhcCCCCeee-eecccC
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVT-LVGACP  593 (888)
Q Consensus       523 i~~~~~~f~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~~-----~~~~~~~~Ei~iL~~l~HpnIv~-l~g~~~  593 (888)
                      +....++|.....||+|+||+||+|.+.   +..||||++.....     .....|.+|+++|+.++|+||+. ++++  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            4455678999999999999999999874   46689998753311     12346899999999999999985 5443  


Q ss_pred             CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccc-cCCcEEEcCCCceeeeccc
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFG  672 (888)
Q Consensus       594 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDL-Kp~NILl~~~~~vKL~DFG  672 (888)
                      ...+|||||++|++|....    .   ..   ...++.+++.+|.|||+   +||+|||| ||+|||++.++.+||+|||
T Consensus        91 ~~~~LVmE~~~G~~L~~~~----~---~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLAR----P---HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             CCcEEEEEccCCCCHHHhC----c---cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence            4579999999999996321    1   11   14678899999999999   89999999 9999999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccC
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG  710 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~  710 (888)
                      +|+.+..............-+...+++.|+|||++...
T Consensus       158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            99987654322111111111345689999999998654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=1.8e-20  Score=202.95  Aligned_cols=258  Identities=33%  Similarity=0.467  Sum_probs=193.6

Q ss_pred             CCccceeeecCceEEEEEEECCeEEEEEEecCCCCCC---hhHHHHHHHHHHhcCCC-CeeeeecccCC--ceEEEEEec
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHP-NLVTLVGACPE--VWTLVYEYL  603 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~l~Hp-nIv~l~g~~~~--~~~LV~Ey~  603 (888)
                      |.....||.|+||.||++... ..+++|.+.......   ...+.+|+.++..+.|+ +|+++++.+..  ..+++++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            667788999999999999888 889999988764433   56799999999999988 79999988843  358999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC-ceeeeccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~  682 (888)
                      .+++|.+++........++......++.|++.+|.|+|.   .+++|||+||+||+++..+ .++++|||++..+.....
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~  157 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS  157 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence            999999766322111368889999999999999999999   8899999999999999988 799999999985544332


Q ss_pred             cCCCccccccCCCCCCcccCChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCchH---HHHHHhhccccc---c
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDTGKLKN---L  753 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~~~~~~---~  753 (888)
                      .....  .......||..|++||.+.+   ..++...|+||+|++++++++|..||.....   ............   .
T Consensus       158 ~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  235 (384)
T COG0515         158 TSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL  235 (384)
T ss_pred             ccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence            11100  01245569999999999987   5788999999999999999999999865542   111111110000   0


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~  793 (888)
                      ........+......+.+++..|+..+|..|.+.......
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            1011111111123578999999999999999998655443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.4e-22  Score=204.74  Aligned_cols=247  Identities=23%  Similarity=0.390  Sum_probs=194.7

Q ss_pred             CCccceeeecCceEEEEEEECCeEEEEEEecCCCCC--ChhHHHHHHHHHHhcCCCCeeeeeccc--CCceEEEEEecCC
Q 002719          530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      .....+|.+...|..|+|.+.+..++.|+++.....  ....|..|.-.|+.+.||||+.++|.|  +.+..++..||+.
T Consensus       192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~  271 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF  271 (448)
T ss_pred             hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence            445667999999999999999999999998765332  235799999999999999999999999  4578899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeee--cccccccccccccc
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS--DFGISRFLSQNEIS  683 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~--DFGla~~~~~~~~~  683 (888)
                      |+|...|+.. .....+..++.+++.++++|+.|||+..+ -|.---|.+..+++|++.+++|+  |--++-  .     
T Consensus       272 gslynvlhe~-t~vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarismad~kfsf--q-----  342 (448)
T KOG0195|consen  272 GSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q-----  342 (448)
T ss_pred             hHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheecccceeee--e-----
Confidence            9999999643 23456777899999999999999999864 23344688999999999887764  222111  0     


Q ss_pred             CCCccccccCCCCCCcccCChhhhccCCCC---chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELT---PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s---~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                              .....-.|.||+||.+...+-+   .++|+|||+++||||.|...||......+..+.     -.+..+...
T Consensus       343 --------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-----ialeglrv~  409 (448)
T KOG0195|consen  343 --------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-----IALEGLRVH  409 (448)
T ss_pred             --------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-----hhhcccccc
Confidence                    0122357899999999876543   478999999999999999999976665544322     233445556


Q ss_pred             CChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcccc
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~  799 (888)
                      .|...+..+.+|+.-|++.||.+||.+ +.++.+|+.+.
T Consensus       410 ippgis~hm~klm~icmnedpgkrpkf-dmivpilekm~  447 (448)
T KOG0195|consen  410 IPPGISRHMNKLMNICMNEDPGKRPKF-DMIVPILEKMI  447 (448)
T ss_pred             CCCCccHHHHHHHHHHhcCCCCcCCCc-ceehhhHHHhc
Confidence            777888999999999999999999999 77888888753

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=6.7e-21  Score=199.61  Aligned_cols=257  Identities=19%  Similarity=0.264  Sum_probs=195.7

Q ss_pred             hcCCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeeeeecccC--CceEEEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~--~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~LV~  600 (888)
                      ..-+|.+.++||+|+||.++.|.  +++.+||||.-...+  ...++..|....+.|. .++|...|.+-+  -+..||+
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            34589999999999999999996  468999999754433  2357899999999985 688888766544  4567999


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-----Cceeeecccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-----FVSKLSDFGISR  675 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-----~~vKL~DFGla~  675 (888)
                      |++ |.||+|++....  ..|+..++..+|.|++.-+.|+|.   +.+|.|||||+|+||...     ..+.|+|||+|+
T Consensus       104 dLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen  104 DLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            999 889999886443  459999999999999999999999   899999999999999643     478999999999


Q ss_pred             ccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HHhhcc--c
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY---ALDTGK--L  750 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~~~--~  750 (888)
                      .+.+..+...- ......+..||.+||+=....+.+.+...|+-|||-++++.|-|..||.+......   -...|.  .
T Consensus       178 ~YrDp~TkqHI-PYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr  256 (449)
T KOG1165|consen  178 EYRDPKTKQHI-PYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR  256 (449)
T ss_pred             hhcCccccccC-ccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence            88766544322 22344566799999999999999999999999999999999999999975432111   111111  1


Q ss_pred             ccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhc
Q 002719          751 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       751 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le  796 (888)
                      .-.+..+...    .+.++...+.-.-..+..+-|+. +-+...+.
T Consensus       257 ~T~i~~Lc~g----~P~efa~Yl~yvR~L~F~E~PDY-dylr~Lf~  297 (449)
T KOG1165|consen  257 STPIEVLCEG----FPEEFATYLRYVRRLDFFETPDY-DYLRKLFD  297 (449)
T ss_pred             cCCHHHHHhc----CHHHHHHHHHHHHhcCcccCCCH-HHHHHHHH
Confidence            1111112222    34678888888888899999997 44444443

>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases

Probab=99.85  E-value=2.4e-20  Score=182.70  Aligned_cols=144  Identities=37%  Similarity=0.602  Sum_probs=121.4

Q ss_pred             EEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL  123 (888)
Q Consensus        46 ~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  123 (888)
                      +|+||||+| ++|.+||+||++..  .+.+|+|+||.+|+.......+       ..+....+.+..++.++++|+++..
T Consensus         1 ~ILVavD~S-~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~   72 (146)
T cd01989           1 SVAVAVDKD-KKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSG-------KLEVASAYKQEEDKEAKELLLPYRC   72 (146)
T ss_pred             CEEEEecCc-cccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCcc-------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999 99999999999984  4779999999987533221111       0123445666777888999999999


Q ss_pred             HHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEecC
Q 002719          124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG  199 (888)
Q Consensus       124 ~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~~g  199 (888)
                      .|...+++++..++++++|+++|+++++++++|+||||+||++.+.|.+.  .|.++..|++.+|++|+|++|++|
T Consensus        73 ~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~--gssva~~Vi~~a~~~c~Vlvv~~~  146 (146)
T cd01989          73 FCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFK--KSDVASSVLKEAPDFCTVYVVSKG  146 (146)
T ss_pred             HHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeeccc--CCchhHHHHhcCCCCceEEEEeCc
Confidence            99989999999988888999999999999999999999999999887765  346899999999999999999998

The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-20  Score=190.10  Aligned_cols=248  Identities=20%  Similarity=0.296  Sum_probs=190.6

Q ss_pred             cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCC-CCeeeeeccc--CCceEEEEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H-pnIv~l~g~~--~~~~~LV~E  601 (888)
                      .+.|.++++||.|+||.+|.|..-  +..||||+-.....  ..++..|..+...|++ ..|..+..+.  .+...+||+
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            468999999999999999999764  68999998765433  3468899999999975 5555555555  346679999


Q ss_pred             ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC---Cceeeeccccccccc
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLS  678 (888)
Q Consensus       602 y~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~  678 (888)
                      .+ |.||++++.-..  ..++..+++-++-|++.-++|+|.   +++|||||||+|+|..-+   ..+.|+|||+|+.+.
T Consensus        92 LL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             cc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            98 889999885433  458889999999999999999999   899999999999999633   478999999999876


Q ss_pred             cccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH-----HHhhcccccc
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-----ALDTGKLKNL  753 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-----~~~~~~~~~~  753 (888)
                      +..+...- .........||..|.+--.+.+...+...|+-|+|.+|.++.-|..||.+......     .+.+.++.-.
T Consensus       166 d~~t~~HI-pyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~  244 (341)
T KOG1163|consen  166 DIRTRQHI-PYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP  244 (341)
T ss_pred             cccccccC-ccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence            54432221 11223445699999999888888889999999999999999999999976543221     1223333333


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      +..+...+|    .++.-.+.-|-..-..+-|+.
T Consensus       245 ie~LC~G~P----~EF~myl~Y~R~L~F~E~Pdy  274 (341)
T KOG1163|consen  245 IEVLCKGFP----AEFAMYLNYCRGLGFEEKPDY  274 (341)
T ss_pred             HHHHhCCCc----HHHHHHHHHHhhcCCCCCCcH
Confidence            333444444    678888899999888888887

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.83  E-value=3.1e-21  Score=227.18  Aligned_cols=251  Identities=23%  Similarity=0.321  Sum_probs=185.7

Q ss_pred             CCCccceeeecCceEEEEEEECCeEEEEEEecCCC-CCChhHHHHHHHH--HHhcCCCCeeeeeccc--CCceEEEEEec
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS-LQGPSEFQQEIDI--LSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~-~~~~~~~~~Ei~i--L~~l~HpnIv~l~g~~--~~~~~LV~Ey~  603 (888)
                      +|...+.||.+.|=.|.+|.++...|+||++-+.. ......|.+.+.-  ...++|||++++.-+-  ....|||-+|+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV  103 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence            57777889999999999999998889999987765 3334455544433  4445899999886654  44678888898


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      . -+|.|.|   ..++.+..-+...|+.|++.||..+|.   .||+|||||.+||||+.-.-+.|+||..-+...-....
T Consensus       104 k-hnLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN  176 (1431)
T KOG1240|consen  104 K-HNLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN  176 (1431)
T ss_pred             h-hhhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence            5 4899998   455778888999999999999999999   89999999999999999888999999877654444434


Q ss_pred             CCCccccccCCCCCCcccCChhhhccC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccc
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG----------E-LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~----------~-~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      +....++..|..+ -.+|+|||.|...          . .+++.||||+||+++||++ |+|||....-..+.  .+. .
T Consensus       177 Padf~fFFDTSrR-RtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr--~~~-~  252 (1431)
T KOG1240|consen  177 PADFTFFFDTSRR-RTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYR--SGN-A  252 (1431)
T ss_pred             cccceEEEecCCc-eeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHh--ccC-c
Confidence            4444444444443 4589999988542          2 6789999999999999987 89999755443332  211 0


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV  794 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~  794 (888)
                      .........   .....+++|+..|++.||.+|-+. +++++.
T Consensus       253 ~~~e~~Le~---Ied~~~Rnlil~Mi~rdPs~RlSA-edyL~~  291 (1431)
T KOG1240|consen  253 DDPEQLLEK---IEDVSLRNLILSMIQRDPSKRLSA-EDYLQK  291 (1431)
T ss_pred             cCHHHHHHh---CcCccHHHHHHHHHccCchhccCH-HHHHHh
Confidence            000001111   112469999999999999999998 555444

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.81  E-value=4e-20  Score=192.72  Aligned_cols=169  Identities=16%  Similarity=0.175  Sum_probs=133.2

Q ss_pred             hcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhH---------HHHHHHHHHhcCCCCeeeeecccC---
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPNLVTLVGACP---  593 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~---------~~~Ei~iL~~l~HpnIv~l~g~~~---  593 (888)
                      ..++|...+.||.|+||.||+....+..+|||++.+........         +.+|+..+.++.||+|..+..++.   
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            46789999999999999999987777889999998765443332         678999999999999998877642   


Q ss_pred             -------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          594 -------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       594 -------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                             ...+|||||++|.+|.++..       ++.    ....+++.+|..||.   +|++|||++|+||+++.+| +
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-E
Confidence                   24789999999999988641       222    345699999999999   9999999999999999988 9


Q ss_pred             eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHH
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL  729 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ell  729 (888)
                      +|+|||..........                    ..-++....|..++|+||||++|..+.
T Consensus       174 ~liDfg~~~~~~e~~a--------------------~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKA--------------------KDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhh--------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence            9999997764421110                    011344455777999999999987654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.80  E-value=1.6e-19  Score=185.21  Aligned_cols=138  Identities=17%  Similarity=0.175  Sum_probs=106.4

Q ss_pred             cceeeecCceEEEEEEEC-CeEEEEEEecCCCCC--C-------hhH-----------------HHHHHHHHHhcCCCCe
Q 002719          533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ--G-------PSE-----------------FQQEIDILSKIRHPNL  585 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~--~-------~~~-----------------~~~Ei~iL~~l~HpnI  585 (888)
                      ...||+|+||.||+|... +..||||+++.....  .       ...                 ..+|+.+|.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            356999999999999875 789999999764221  1       112                 2349999999987776


Q ss_pred             eeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeccccCCcEEEcCCC
Q 002719          586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKPANILLDANF  664 (888)
Q Consensus       586 v~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~giiHrDLKp~NILl~~~~  664 (888)
                      .....+.....+|||||++|++|...+.   ...+++...+..++.|++.+|.+| |.   .||+||||||+|||++ ++
T Consensus        82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~~  154 (190)
T cd05147          82 PCPEPILLKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-DG  154 (190)
T ss_pred             CCCcEEEecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-CC
Confidence            4332222233489999999887765432   224688999999999999999999 67   7999999999999998 47


Q ss_pred             ceeeecccccccc
Q 002719          665 VSKLSDFGISRFL  677 (888)
Q Consensus       665 ~vKL~DFGla~~~  677 (888)
                      .++|+|||+|...
T Consensus       155 ~v~LiDFG~a~~~  167 (190)
T cd05147         155 KLYIIDVSQSVEH  167 (190)
T ss_pred             cEEEEEccccccC
Confidence            8999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=2.9e-20  Score=220.37  Aligned_cols=247  Identities=22%  Similarity=0.305  Sum_probs=175.6

Q ss_pred             CccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCCh----hHHHHHHHHHHhcCCCCeeeeecccCC--ceEEEE
Q 002719          531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGP----SEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY  600 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~--~~~~~----~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~LV~  600 (888)
                      .....+|.|+||.|+.....  ....+.|.+...  .....    ..+..|+.+-..|.|||++..+..+.+  ..+-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            34567999999977766543  233344433211  11111    125567777788899999887776532  233349


Q ss_pred             EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccc
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  680 (888)
                      |||++ +|..++...   ..++...+..++.|++.||.|||.   .||.||||||+|++++.+|.+||+|||.+..+...
T Consensus       401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            99999 999988432   457888999999999999999999   89999999999999999999999999999876544


Q ss_pred             cccCCCccccccCCCCCCcccCChhhhccCCCCc-hhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTP-KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~-ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ...    .........|+-.|+|||.+.+..|++ ..||||.|++++.|++|+.||......+................+
T Consensus       474 ~e~----~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~  549 (601)
T KOG0590|consen  474 WEK----NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG  549 (601)
T ss_pred             cch----hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence            321    112345667999999999999999986 579999999999999999999654332221100000000000111


Q ss_pred             --CCChhhHHHHHHHHHHHhhcCCCCCCChH
Q 002719          760 --DWPFVQAEQLANLAMRCCEMSRKSRPELG  788 (888)
Q Consensus       760 --~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~  788 (888)
                        ..-...+.....++.++|+.+|.+|.++.
T Consensus       550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~  580 (601)
T KOG0590|consen  550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIE  580 (601)
T ss_pred             hHHHHHhchhhHHHHHHHHccCChhheecHH
Confidence              11123456789999999999999999993

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=3.6e-19  Score=181.92  Aligned_cols=192  Identities=15%  Similarity=0.056  Sum_probs=142.3

Q ss_pred             CccceeeecCceEEEEEEECCeEEEEEEecCCCCCC----hhHHHHHHHHHHhcC-CCCeeeeecccCCceEEEEEecCC
Q 002719          531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG----PSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYLPN  605 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~----~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~~LV~Ey~~g  605 (888)
                      .+...|++|+||+||.+...+.+++.+.+.....-.    ...+.+|+++|++|. |++|++++++  +..+++|||+.|
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G   82 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG   82 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence            456679999999999887778889888776543311    125789999999995 5889999886  457899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccc-cCCcEEEcCCCceeeecccccccccccccc-
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFGISRFLSQNEIS-  683 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDL-Kp~NILl~~~~~vKL~DFGla~~~~~~~~~-  683 (888)
                      .+|...+.   .       ....++.+++.+|.++|.   +||+|||| ||+|||++.++.++|+|||+|......... 
T Consensus        83 ~~L~~~~~---~-------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~  149 (218)
T PRK12274         83 AAMYQRPP---R-------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM  149 (218)
T ss_pred             ccHHhhhh---h-------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence            99875431   0       113577899999999999   89999999 799999999999999999999865432210 


Q ss_pred             ---C-CCccccccCCCCCCcccCChhhhccC-CCC-chhhHHHHHHHHHHHHhCCCCCCC
Q 002719          684 ---S-NNTTLCCRTDPKGTFAYMDPEFLASG-ELT-PKSDVYSFGIILLRLLTGRPALGI  737 (888)
Q Consensus       684 ---~-~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s-~ksDVwSlGviL~elltG~~Pf~~  737 (888)
                         . .............++.|++|+...-- ..+ ...++++.|+-+|.++|++.++..
T Consensus       150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence               0 00000001112368889999865432 333 567999999999999999988743

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.78  E-value=9e-20  Score=206.66  Aligned_cols=221  Identities=27%  Similarity=0.325  Sum_probs=178.2

Q ss_pred             eeecCceEEEEE-----EECCeEEEEEEecCCCCCC--hhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEEEEEecCC
Q 002719          536 IGEGGYGSIYKG-----LLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPN  605 (888)
Q Consensus       536 LG~G~fG~Vy~g-----~~~~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~LV~Ey~~g  605 (888)
                      +|+|.||.|++.     ...+.-+|+|++++.....  ......|..++..++ ||.+|++...+  +...+++++|..|
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            799999999864     3445778999887754322  225667888999887 99999999887  4478899999999


Q ss_pred             CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC
Q 002719          606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN  685 (888)
Q Consensus       606 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~  685 (888)
                      |.|...+.   ....+.+.....+...++.++.++|.   .+|+|||+|++||+++.+|++++.|||+++..-.....  
T Consensus        82 g~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--  153 (612)
T KOG0603|consen   82 GDLFTRLS---KEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--  153 (612)
T ss_pred             chhhhccc---cCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence            99998884   33457778888889999999999999   89999999999999999999999999999865443211  


Q ss_pred             CccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 002719          686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       686 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                                .||..|||||++.  ......|+||||+++++|+||..||..  +..         ..+.......|...
T Consensus       154 ----------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~---------~~Il~~~~~~p~~l  210 (612)
T KOG0603|consen  154 ----------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTM---------KRILKAELEMPREL  210 (612)
T ss_pred             ----------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HHH---------HHHhhhccCCchhh
Confidence                      4899999999998  667889999999999999999999976  111         11111223456677


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCh
Q 002719          766 AEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ...+..++..++..+|.+|--.
T Consensus       211 ~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  211 SAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hHHHHHHHHHHHhhCHHHHhcc
Confidence            7889999999999999999755

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.76  E-value=2.9e-18  Score=176.02  Aligned_cols=141  Identities=17%  Similarity=0.166  Sum_probs=109.1

Q ss_pred             cceeeecCceEEEEEEEC-CeEEEEEEecCCCCC---------------------C-----hhHHHHHHHHHHhcCCCCe
Q 002719          533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ---------------------G-----PSEFQQEIDILSKIRHPNL  585 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~---------------------~-----~~~~~~Ei~iL~~l~HpnI  585 (888)
                      ...||+|+||.||+|... ++.||||+++.....                     .     ...+..|...+.++.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            457999999999999875 889999999865321                     0     1123578999999999987


Q ss_pred             eeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       586 v~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      .....+.....+|||||++|+++.....   ....++......++.+++.+|.+||+.  +||+||||||+|||++ ++.
T Consensus        82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~-~~~  155 (190)
T cd05145          82 PVPEPILLKKNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH-DGK  155 (190)
T ss_pred             CCceEEEecCCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE-CCC
Confidence            4433322234589999999886544321   123577889999999999999999983  5899999999999999 789


Q ss_pred             eeeecccccccccc
Q 002719          666 SKLSDFGISRFLSQ  679 (888)
Q Consensus       666 vKL~DFGla~~~~~  679 (888)
                      ++|+|||++.....
T Consensus       156 ~~liDFG~a~~~~~  169 (190)
T cd05145         156 PYIIDVSQAVELDH  169 (190)
T ss_pred             EEEEEcccceecCC
Confidence            99999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-17  Score=178.37  Aligned_cols=200  Identities=22%  Similarity=0.240  Sum_probs=139.3

Q ss_pred             CCCCeeeeecccC-----------------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHH
Q 002719          581 RHPNLVTLVGACP-----------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT  631 (888)
Q Consensus       581 ~HpnIv~l~g~~~-----------------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~  631 (888)
                      +|||||+++++|-                             ...|+||.-.+ .+|..+|..+    ..+.....-|+.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~----~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR----HRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC----CCchHHHHHHHH
Confidence            5999999988761                             13578888774 4898888433    355667888999


Q ss_pred             HHHHHHHHHhhcCCCceeeccccCCcEEEc--CCC--ceeeeccccccccccccccCCCccccccCCCCCCcccCChhhh
Q 002719          632 ELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANF--VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL  707 (888)
Q Consensus       632 qia~aL~~LH~~~~~giiHrDLKp~NILl~--~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l  707 (888)
                      |+++|+.|||.   +||.|||||++||||.  +++  .+.|+|||+|---...+.....  .......-|...-||||+.
T Consensus       349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy--~S~~Vd~GGNa~lmAPEi~  423 (598)
T KOG4158|consen  349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPY--ESDEVDLGGNAKLMAPEIA  423 (598)
T ss_pred             HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeecccccccccc--ccccccCCCcceecchhhh
Confidence            99999999999   9999999999999993  333  6789999987533221111111  1112233478899999998


Q ss_pred             ccCC-----C-CchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCC
Q 002719          708 ASGE-----L-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR  781 (888)
Q Consensus       708 ~~~~-----~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP  781 (888)
                      ...+     . -.|+|.|+.|.+.||+++...||....+....... ....-+    +..|...+..+.+|+...|+.||
T Consensus       424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe~qL----Palp~~vpp~~rqlV~~lL~r~p  498 (598)
T KOG4158|consen  424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQESQL----PALPSRVPPVARQLVFDLLKRDP  498 (598)
T ss_pred             hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-hhhhhC----CCCcccCChHHHHHHHHHhcCCc
Confidence            6532     1 24799999999999999999999753332111111 011112    22344556789999999999999


Q ss_pred             CCCCChHHHHHHHhc
Q 002719          782 KSRPELGKDVWRVLE  796 (888)
Q Consensus       782 ~~RPs~~~~v~~~Le  796 (888)
                      .+||+. .+...+|+
T Consensus       499 skRvsp-~iAANvl~  512 (598)
T KOG4158|consen  499 SKRVSP-NIAANVLN  512 (598)
T ss_pred             cccCCc-cHHHhHHH
Confidence            999997 55555553

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.73  E-value=1.3e-17  Score=178.89  Aligned_cols=230  Identities=21%  Similarity=0.303  Sum_probs=146.7

Q ss_pred             CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC---ChhHHHHHHHHHHhcCC---C-------Ce------ee
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRH---P-------NL------VT  587 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~~~---~~~~~~~Ei~iL~~l~H---p-------nI------v~  587 (888)
                      .+.....||.|+++.||.+++..  ..+|+|++......   ..+.+++|.-....+.+   |       .+      ++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            34556789999999999999975  89999988654422   23456666544444322   1       11      11


Q ss_pred             eecc---c---C--C-----ceEEEEEecCCCChhhhhhc---cCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceee
Q 002719          588 LVGA---C---P--E-----VWTLVYEYLPNGSLEDRLSC---KDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH  650 (888)
Q Consensus       588 l~g~---~---~--~-----~~~LV~Ey~~ggsL~~~L~~---~~~-~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiH  650 (888)
                      +-+-   +   .  .     +.+++|+-+ .++|.+++..   ... ...+....+..+..|+++.+++||.   .|++|
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH  168 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVH  168 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence            1110   0   0  0     235677777 4688777532   221 1234445566777999999999999   99999


Q ss_pred             ccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC--------CCCchhhHHHHH
Q 002719          651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--------ELTPKSDVYSFG  722 (888)
Q Consensus       651 rDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--------~~s~ksDVwSlG  722 (888)
                      +||+|+|+|++.+|.++|+||+.....+.....           ...+..|.+||.....        .++.+.|.|+||
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG  237 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG  237 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCceeec-----------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence            999999999999999999999977655432211           1245789999977442        478899999999


Q ss_pred             HHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCC
Q 002719          723 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR  784 (888)
Q Consensus       723 viL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~R  784 (888)
                      +++|.|++|+.||+........          +.....+. ..++.+..||..+|+.||.+|
T Consensus       238 ~~ly~lWC~~lPf~~~~~~~~~----------~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  238 ITLYSLWCGRLPFGLSSPEADP----------EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHHSS-STCCCGGGSTS----------GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHHccCCCCCCCccccc----------cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999999999999755321100          00122344 667899999999999999988

>PRK10345 hypothetical protein; Provisional

Probab=99.72  E-value=2.1e-17  Score=171.51  Aligned_cols=132  Identities=18%  Similarity=0.249  Sum_probs=102.7

Q ss_pred             CccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhc-----CCCCeeeeecccCCc------eEEE
Q 002719          531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-----RHPNLVTLVGACPEV------WTLV  599 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-----~HpnIv~l~g~~~~~------~~LV  599 (888)
                      .....||+|+||.||.... ....+||++........+.+.+|+.+++.+     +||||++++|++...      +.+|
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~-~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPE-DAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CCcceecCCCceEEEECCC-CcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            3456799999999996222 233469988765444567899999999999     679999999998442      2378


Q ss_pred             EEe--cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCceeeccccCCcEEEcC----CCceeeeccc
Q 002719          600 YEY--LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL-IFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDFG  672 (888)
Q Consensus       600 ~Ey--~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~~LH~~~~~giiHrDLKp~NILl~~----~~~vKL~DFG  672 (888)
                      +||  +++|+|.+++..    ..+++.  ..++.+++.++ .|||+   ++|+||||||+|||++.    ++.++|+||+
T Consensus        84 ~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             ecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            999  667999999943    235554  35678888787 89999   89999999999999973    3489999954

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.71  E-value=2.2e-17  Score=187.74  Aligned_cols=210  Identities=27%  Similarity=0.449  Sum_probs=154.0

Q ss_pred             HHhcCCCCeeeeeccc--CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce-eeccc
Q 002719          577 LSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI-VHGDL  653 (888)
Q Consensus       577 L~~l~HpnIv~l~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~gi-iHrDL  653 (888)
                      |+.+.|.|+.+++|.+  ....++|.+||..|+|.|.+..  ....+++.....++.+|+.||.|||..   +| .|+.|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l   75 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL   75 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence            4578999999999988  4567899999999999999964  345688999999999999999999993   34 99999


Q ss_pred             cCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC---C----CCchhhHHHHHHHHH
Q 002719          654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG---E----LTPKSDVYSFGIILL  726 (888)
Q Consensus       654 Kp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~----~s~ksDVwSlGviL~  726 (888)
                      ++.|++++..+.+||+|||+............      .....-..-|.|||.+...   .    .+.+.||||||++++
T Consensus        76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~  149 (484)
T KOG1023|consen   76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEA------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMY  149 (484)
T ss_pred             ccccceeeeeEEEEechhhhcccccccccccc------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHH
Confidence            99999999999999999999877643110000      0111245689999999763   1    467799999999999


Q ss_pred             HHHhCCCCCCCchH------HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhccccc
Q 002719          727 RLLTGRPALGITKE------VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       727 elltG~~Pf~~~~~------~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~l~~  800 (888)
                      |+++...||+....      ....+.. .....+.|...... ...+.+..++..||..+|.+||++ +.+...++.+..
T Consensus       150 ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~-~~i~~~~~~~~~  226 (484)
T KOG1023|consen  150 EILFRSGPFDLRNLVEDPDEIILRVKK-GGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSI-EQIRSKLLTINK  226 (484)
T ss_pred             HHHhccCccccccccCChHHHHHHHHh-cCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccH-HHHHhhhhhhcc
Confidence            99999999975321      1111111 01111122111111 233479999999999999999999 666666555443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.71  E-value=2.3e-17  Score=195.15  Aligned_cols=217  Identities=24%  Similarity=0.283  Sum_probs=147.5

Q ss_pred             hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccCCceEEEEEe
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEY  602 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~LV~Ey  602 (888)
                      ....+|+.++.|..|+||.||...++  .+++|+|+ ++....    +++   +|             .|.++.+.|   
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li----lRn---il-------------t~a~npfvv---  135 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI----LRN---IL-------------TFAGNPFVV---  135 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccccchhhcc-cccchh----hhc---cc-------------cccCCccee---
Confidence            34568999999999999999999877  57788854 322211    111   22             222233333   


Q ss_pred             cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccc
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  682 (888)
                         |+-.+.+   .+-++++..        ++.+++|||+   .||+|||+||+|+||+.-|++|++|||+++.......
T Consensus       136 ---gDc~tll---k~~g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a  198 (1205)
T KOG0606|consen  136 ---GDCATLL---KNIGPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA  198 (1205)
T ss_pred             ---chhhhhc---ccCCCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence               4444444   222334433        2778999999   8999999999999999999999999999875432211


Q ss_pred             cC-------CCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-Hhhccccccc
Q 002719          683 SS-------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-LDTGKLKNLL  754 (888)
Q Consensus       683 ~~-------~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~~~~~l  754 (888)
                      ..       ............||+.|+|||++....|+..+|+|++|+|+|+.+.|..||.+....+.. ..........
T Consensus       199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp  278 (1205)
T KOG0606|consen  199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP  278 (1205)
T ss_pred             chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence            10       011112234457999999999999999999999999999999999999999776433211 1111111111


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       755 d~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                         ..+  ...+.+.++++.++|+.+|..|--.
T Consensus       279 ---E~d--ea~p~Ea~dli~~LL~qnp~~Rlgt  306 (1205)
T KOG0606|consen  279 ---EED--EALPPEAQDLIEQLLRQNPLCRLGT  306 (1205)
T ss_pred             ---ccC--cCCCHHHHHHHHHHHHhChHhhccc
Confidence               111  2234689999999999999999643

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=7.9e-17  Score=194.75  Aligned_cols=249  Identities=23%  Similarity=0.306  Sum_probs=176.3

Q ss_pred             hhhhhhcCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCChhHHHHHHHHHHhcC---CCCeeeeecc--cCC
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR---HPNLVTLVGA--CPE  594 (888)
Q Consensus       521 ~ei~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~---HpnIv~l~g~--~~~  594 (888)
                      .+++.....|.+.+.||+|+||.||+|... ++.||+|+-++....   +|.--.+++.+|+   -+-|+.+..+  |.+
T Consensus       691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~  767 (974)
T KOG1166|consen  691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQN  767 (974)
T ss_pred             ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence            445556678999999999999999999765 688999998766543   3333344555665   1233333332  367


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc-------CCCcee
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-------ANFVSK  667 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~-------~~~~vK  667 (888)
                      ..+||+||.+.|+|.+++.   ....+++.....++.|++..+..||.   .+||||||||+|+||.       .+.-++
T Consensus       768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceE
Confidence            8889999999999999994   66779999999999999999999999   8899999999999993       234689


Q ss_pred             eeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 002719          668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT  747 (888)
Q Consensus       668 L~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~  747 (888)
                      |+|||.+.-+.--.   ....   -...++|-.+-.+|+..+..++...|.|.|+.+++-||.|+.-       +  ...
T Consensus       842 lIDfG~siDm~lfp---~~~~---F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-------q--~~~  906 (974)
T KOG1166|consen  842 LIDFGRSIDMKLFP---DGTK---FKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-------E--VKN  906 (974)
T ss_pred             EEecccceeeeEcC---CCcE---EeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-------H--hcC
Confidence            99999886443211   1111   1345678899999999999999999999999999999999631       1  111


Q ss_pred             cccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHHHHhcc
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~~~Le~  797 (888)
                      |....+......-|   .-.-+.+++..+|+.|-..=|.+ .++...++.
T Consensus       907 g~~~~~~~~~~Ry~---~~~~W~~~F~~lLN~~~~~~p~l-~~lr~~~~~  952 (974)
T KOG1166|consen  907 GSSWMVKTNFPRYW---KRDMWNKFFDLLLNPDCDTLPNL-QELRTELEE  952 (974)
T ss_pred             Ccceeccccchhhh---hHHHHHHHHHHHhCcCcccchhH-HHHHHHHHH
Confidence            11111111111111   12345677778888555555666 445444443

>smart00090 RIO RIO-like kinase

Probab=99.68  E-value=1.3e-16  Score=169.36  Aligned_cols=140  Identities=18%  Similarity=0.158  Sum_probs=109.6

Q ss_pred             CCCccceeeecCceEEEEEE---ECCeEEEEEEecCCCCC-------------------C-----hhHHHHHHHHHHhcC
Q 002719          529 NFDPSLKIGEGGYGSIYKGL---LRHMQVAIKMLHPHSLQ-------------------G-----PSEFQQEIDILSKIR  581 (888)
Q Consensus       529 ~f~~~~~LG~G~fG~Vy~g~---~~~~~VAIK~l~~~~~~-------------------~-----~~~~~~Ei~iL~~l~  581 (888)
                      .|.+...||+|+||.||+|.   ..+..||||++......                   .     ...+..|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47778899999999999998   24789999998754311                   0     013568999999997


Q ss_pred             CC--CeeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eeeccccCCcE
Q 002719          582 HP--NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANI  658 (888)
Q Consensus       582 Hp--nIv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~g-iiHrDLKp~NI  658 (888)
                      +.  .+.+++++  ...++||||++|++|...+.   ....+.......++.|++.+|.+||.   +| |+||||||+||
T Consensus       109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NI  180 (237)
T smart00090      109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNI  180 (237)
T ss_pred             hcCCCCCeeeEe--cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhE
Confidence            53  34455543  24589999999988876542   22345666778999999999999999   88 99999999999


Q ss_pred             EEcCCCceeeecccccccc
Q 002719          659 LLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       659 Ll~~~~~vKL~DFGla~~~  677 (888)
                      +++ ++.++|+|||.+...
T Consensus       181 li~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      181 LVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEE-CCCEEEEEChhhhcc
Confidence            999 889999999987644

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.68  E-value=2.1e-16  Score=162.93  Aligned_cols=128  Identities=27%  Similarity=0.415  Sum_probs=105.4

Q ss_pred             eeeecCceEEEEEEECCeEEEEEEecCCCCCC--------hhHHHHHHHHHHhcCCCCe--eeeecccCCceEEEEEecC
Q 002719          535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNL--VTLVGACPEVWTLVYEYLP  604 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~--------~~~~~~Ei~iL~~l~HpnI--v~l~g~~~~~~~LV~Ey~~  604 (888)
                      .||+|+||.||+|.+.+..|++|.........        ...+.+|+.++..+.|+++  ..+++...+..++||||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            38999999999999999999999876432211        2457789999999988754  4455555667799999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      |++|.+++....          ..++.+++.+|.+||.   .|++|||++|.||+++ ++.++++|||++..
T Consensus        81 g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        81 GKPLKDVIEEGN----------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CccHHHHHhhcH----------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999873211          0789999999999999   8999999999999999 78999999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=2.5e-16  Score=163.88  Aligned_cols=132  Identities=27%  Similarity=0.417  Sum_probs=109.9

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCC--------hhHHHHHHHHHHhcCCCCeeeeecc--cCCceEEEEEec
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYL  603 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~--------~~~~~~Ei~iL~~l~HpnIv~l~g~--~~~~~~LV~Ey~  603 (888)
                      +.||+|++|.||+|.+.+..|++|+........        ...+.+|+.++..+.|++|.....+  ..+..++||||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            469999999999999999999999876543222        1357789999999999887655444  456788999999


Q ss_pred             CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       604 ~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      +|++|.+++...      .. .+..++.+++.+|.+||.   .+++|||++|.|||++ ++.++|+|||++..
T Consensus        82 ~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSN------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999988421      12 788999999999999999   8999999999999999 78899999998764

>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis

Probab=99.67  E-value=2e-17  Score=141.85  Aligned_cols=71  Identities=44%  Similarity=0.843  Sum_probs=63.0

Q ss_pred             CCCCCcchhhhhhhcCCccccCCccchhhhhhhhccCCCCCCCCCCCcCCCCCCCchHHHHHHHHHHHHhC
Q 002719          818 PPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH  888 (888)
Q Consensus       818 ~P~~f~cPi~~evm~dP~i~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~~  888 (888)
                      +|++|.|||+.++|.|||++++|+|||+..|++|+..++.+||+|+++|...+|+||.+||++|++|+.+|
T Consensus         1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~   71 (73)
T PF04564_consen    1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAEN   71 (73)
T ss_dssp             SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHC
T ss_pred             CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHc
Confidence            59999999999999999999999999999999999998899999999999999999999999999999986

Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=7.8e-17  Score=179.84  Aligned_cols=173  Identities=23%  Similarity=0.361  Sum_probs=132.7

Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ++|+.|++|.-.+|.++|..+......++.....++.|++.|+.|      ++.+|+|+||.||++..+..+||+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            578999999999999999777666678888999999999999999      47999999999999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccc
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      ..........  ......+...||..||+||.+.+..|+.++||||||+||+|+++ -..+|..         .+.+..+
T Consensus       404 ts~~~~~~~~--~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------~~t~~d~  472 (516)
T KOG1033|consen  404 TSQDKDETVA--PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------IATLTDI  472 (516)
T ss_pred             eecccCCccc--chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------HHhhhhh
Confidence            7665544111  11123456789999999999999999999999999999999998 2222211         1111111


Q ss_pred             cCCCCCCCC---hhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          754 LDPLAGDWP---FVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       754 ld~~~~~~p---~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      -+.   .||   ....+.-+.|+.+++.+.|.+||++
T Consensus       473 r~g---~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~  506 (516)
T KOG1033|consen  473 RDG---IIPPEFLQDYPEEYTLLQQLLSPSPEERPSA  506 (516)
T ss_pred             hcC---CCChHHhhcCcHHHHHHHHhcCCCcccCchH
Confidence            111   122   1112345789999999999999955

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.63  E-value=8.7e-16  Score=182.38  Aligned_cols=137  Identities=28%  Similarity=0.373  Sum_probs=111.7

Q ss_pred             hhcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCC--------ChhHHHHHHHHHHhcCCCCeeeeeccc--CC
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIRHPNLVTLVGAC--PE  594 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~--------~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~  594 (888)
                      .....|...+.||+|+||.||+|.+.+..+++|+.......        ....+.+|+.++..++|++++..+.++  .+
T Consensus       330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        330 EVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             ccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            34455677889999999999999998777776654332111        124588999999999999988765544  45


Q ss_pred             ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      ..++||||++|++|.+++.           ....++.+++.+|.+||+   ++++||||||+|||+ .++.++|+|||++
T Consensus       410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            7889999999999999883           457789999999999999   899999999999999 5778999999998


Q ss_pred             cc
Q 002719          675 RF  676 (888)
Q Consensus       675 ~~  676 (888)
                      +.
T Consensus       475 ~~  476 (535)
T PRK09605        475 KY  476 (535)
T ss_pred             cc
Confidence            65

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.63  E-value=1.3e-15  Score=157.21  Aligned_cols=138  Identities=20%  Similarity=0.169  Sum_probs=108.7

Q ss_pred             cCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCC----------------------ChhHHHHHHHHHHhcCCC
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ----------------------GPSEFQQEIDILSKIRHP  583 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~----------------------~~~~~~~Ei~iL~~l~Hp  583 (888)
                      ...|.+.+.||.|+||.||++... ++.||||++......                      ....+..|+.++..+.|+
T Consensus        14 ~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   93 (198)
T cd05144          14 GVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE   93 (198)
T ss_pred             CchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence            334777889999999999999884 789999987653210                      011367789999999877


Q ss_pred             --CeeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEc
Q 002719          584 --NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD  661 (888)
Q Consensus       584 --nIv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~  661 (888)
                        .+...++.  ...++||||++|++|......         .....++.+++.++.++|.   .||+||||||.||+++
T Consensus        94 ~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~  159 (198)
T cd05144          94 GFPVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVD  159 (198)
T ss_pred             CCCCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEc
Confidence              44555543  345899999999999775420         2456788999999999999   8999999999999999


Q ss_pred             CCCceeeeccccccccc
Q 002719          662 ANFVSKLSDFGISRFLS  678 (888)
Q Consensus       662 ~~~~vKL~DFGla~~~~  678 (888)
                      .++.++|+|||++....
T Consensus       160 ~~~~~~liDfg~~~~~~  176 (198)
T cd05144         160 DDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CCCcEEEEECCccccCC
Confidence            99999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.56  E-value=2.1e-14  Score=139.25  Aligned_cols=132  Identities=20%  Similarity=0.276  Sum_probs=112.0

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCC--CCeeeeecccC--CceEEEEEecCCCCh
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--PNLVTLVGACP--EVWTLVYEYLPNGSL  608 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H--pnIv~l~g~~~--~~~~LV~Ey~~ggsL  608 (888)
                      .+.||.|.++.||++...+..+++|.......  ...+.+|+.++..+.|  ++++++++++.  +..+++|||++|+.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            46799999999999999888999999865433  4579999999999976  58888888774  378999999998877


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ..+          +......++.+++.+|.+||.....+++|+||+|.||+++..+.++++|||.+..
T Consensus        81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            543          4456778899999999999996555899999999999999989999999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK15005 universal stress protein F; Provisional

Probab=99.54  E-value=9.7e-14  Score=135.44  Aligned_cols=138  Identities=13%  Similarity=0.182  Sum_probs=98.7

Q ss_pred             CCEEEEEecCCccc--cHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 002719           44 EDKIYVAVAKQVKE--SKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD  119 (888)
Q Consensus        44 ~~~V~VAVD~s~~~--S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  119 (888)
                      -++|+||||+| ++  |.+||+||++-  ..+.+|+|+||.++.......+  +... .....    .....+.+++.|+
T Consensus         2 ~~~ILv~~D~s-~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~--~~~~-~~~~~----~~~~~~~~~~~l~   73 (144)
T PRK15005          2 NRTILVPIDIS-DSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLG--LAYS-AELPA----MDDLKAEAKSQLE   73 (144)
T ss_pred             CccEEEecCCC-chhHHHHHHHHHHHHHhccCCeEEEEEEEccCccccccc--cccc-ccchH----HHHHHHHHHHHHH
Confidence            37899999999 77  57999999986  3577999999998653311111  1000 00011    1223444555666


Q ss_pred             HHHHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       120 ~~~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      ++...+...+++++..+. .|+|.+.|+++++++++|+||||+|+ +.+.|.+.   +.++..|++.++  |+|++|
T Consensus        74 ~~~~~~~~~~~~~~~~v~-~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~~ll---GS~a~~vl~~a~--cpVlvV  143 (144)
T PRK15005         74 EIIKKFKLPTDRVHVHVE-EGSPKDRILELAKKIPADMIIIASHR-PDITTYLL---GSNAAAVVRHAE--CSVLVV  143 (144)
T ss_pred             HHHHHhCCCCCceEEEEe-CCCHHHHHHHHHHHcCCCEEEEeCCC-CCchheee---cchHHHHHHhCC--CCEEEe
Confidence            666666667777776654 57999999999999999999999984 45666554   677899999988  999998

>PRK15456 universal stress protein UspG; Provisional

Probab=99.53  E-value=1.1e-13  Score=135.14  Aligned_cols=138  Identities=16%  Similarity=0.177  Sum_probs=102.1

Q ss_pred             CCEEEEEecCCc-cccHHHHHHHhhcC-CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 002719           44 EDKIYVAVAKQV-KESKSVLLWALQNS-GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC  121 (888)
Q Consensus        44 ~~~V~VAVD~s~-~~S~~Al~Wal~n~-~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  121 (888)
                      =++|+||||+|. +.|.+||+||+.-. ....|+|+||.++...... . .+   .   .....+.+..++.+++.|+++
T Consensus         2 ~~~ILv~vD~S~~~~s~~al~~A~~la~~~~~l~llhv~~~~~~~~~-~-~~---~---~~~~~~~~~~~~~~~~~l~~~   73 (142)
T PRK15456          2 YKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSL-H-RF---A---ADVRRFEEHLQHEAEERLQTM   73 (142)
T ss_pred             CccEEEeccCCchhHHHHHHHHHHHHHhcCCeEEEEEEecCcccccc-c-cc---c---cchhhHHHHHHHHHHHHHHHH
Confidence            378999999982 38999999999752 2358999999987532111 0 00   0   112234455566677778888


Q ss_pred             HHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          122 LLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       122 ~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      .......+++++..+ ..|+|.+.|+++++++++|+||||+||++ +.+.+.   |+++..|++.++  |+|.+|
T Consensus        74 ~~~~~~~~~~v~~~v-~~G~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~ll---GS~a~~v~~~a~--~pVLvV  141 (142)
T PRK15456         74 VSHFTIDPSRIKQHV-RFGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLL---GSNASSVIRHAN--LPVLVV  141 (142)
T ss_pred             HHHhCCCCcceEEEE-cCCChHHHHHHHHhhcCCCEEEEcCCCCC-ccceec---CccHHHHHHcCC--CCEEEe
Confidence            777666677887665 45799999999999999999999999976 666554   677889999877  999998

>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family

Probab=99.51  E-value=1.5e-13  Score=130.60  Aligned_cols=121  Identities=12%  Similarity=0.255  Sum_probs=99.3

Q ss_pred             EEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL  123 (888)
Q Consensus        46 ~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  123 (888)
                      +|+||||+| +.|++||+||.+..  .+..|.+|||.++...      ..                 .+...+.++.++.
T Consensus         1 ~Ilv~vd~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~------~~-----------------~~~~~~~l~~~~~   56 (124)
T cd01987           1 RILVCISGG-PNAERLIRRAARLADRLKAPWYVVYVETPRLN------RL-----------------SEAERRRLAEALR   56 (124)
T ss_pred             CEEEEECCC-cchHHHHHHHHHHHHHhCCCEEEEEEecCccc------cC-----------------CHHHHHHHHHHHH
Confidence            589999999 99999999999873  4679999999875321      00                 1234567788888


Q ss_pred             HHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       124 ~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      .+++.++.+  .++.+++++++|+++++++++|+||||+|+++.++|.+.   ++.+..++..+ .-|.|||+
T Consensus        57 ~~~~~~~~~--~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~---Gs~~~~v~~~a-~~~~v~v~  123 (124)
T cd01987          57 LAEELGAEV--VTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFR---GSLVDRLLRRA-GNIDVHIV  123 (124)
T ss_pred             HHHHcCCEE--EEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhc---ccHHHHHHHhC-CCCeEEEe
Confidence            888777754  345678999999999999999999999999999999886   67788888888 78999997

The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.50  E-value=7.4e-14  Score=142.41  Aligned_cols=137  Identities=18%  Similarity=0.189  Sum_probs=96.9

Q ss_pred             cceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC--hhH----------------------HHHHHHHHHhcCCCC--e
Q 002719          533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--PSE----------------------FQQEIDILSKIRHPN--L  585 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~--~~~----------------------~~~Ei~iL~~l~Hpn--I  585 (888)
                      .+.||+|+||.||+|... +..||||++.......  ...                      ...|...+..+.+.+  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            457999999999999887 7899999987643211  111                      135666666664432  4


Q ss_pred             eeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc
Q 002719          586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       586 v~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~  665 (888)
                      .+.+++  ...++||||++++++........   ... .....++.+++.++.++|..  .+|+||||||+||+++ ++.
T Consensus        82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~~~  152 (187)
T cd05119          82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-DGK  152 (187)
T ss_pred             CceEec--CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-CCc
Confidence            444443  24689999999965432111000   011 56788999999999999973  5799999999999999 889


Q ss_pred             eeeeccccccccc
Q 002719          666 SKLSDFGISRFLS  678 (888)
Q Consensus       666 vKL~DFGla~~~~  678 (888)
                      ++|+|||.+....
T Consensus       153 ~~liDfg~a~~~~  165 (187)
T cd05119         153 VYIIDVPQAVEID  165 (187)
T ss_pred             EEEEECccccccc
Confidence            9999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.50  E-value=1.2e-13  Score=146.95  Aligned_cols=132  Identities=19%  Similarity=0.197  Sum_probs=103.6

Q ss_pred             ceee-ecCceEEEEEEECCeEEEEEEecCCC-------------CCChhHHHHHHHHHHhcCCCCe--eeeecccCC---
Q 002719          534 LKIG-EGGYGSIYKGLLRHMQVAIKMLHPHS-------------LQGPSEFQQEIDILSKIRHPNL--VTLVGACPE---  594 (888)
Q Consensus       534 ~~LG-~G~fG~Vy~g~~~~~~VAIK~l~~~~-------------~~~~~~~~~Ei~iL~~l~HpnI--v~l~g~~~~---  594 (888)
                      ..|| .||.|+||.....+..++||.+....             ......+.+|+.++..|.|++|  +..++++..   
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            4688 89999999998888999999885321             1123467889999999998775  566665311   


Q ss_pred             ---ceEEEEEecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeec
Q 002719          595 ---VWTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD  670 (888)
Q Consensus       595 ---~~~LV~Ey~~g-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~D  670 (888)
                         ..++||||++| .+|.+++..    .+++..    .+.+++.+|.+||.   +||+||||||.|||++.++.++|+|
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEEE
Confidence               23599999997 689888742    234443    35789999999999   9999999999999999988999999


Q ss_pred             cccccc
Q 002719          671 FGISRF  676 (888)
Q Consensus       671 FGla~~  676 (888)
                      ||.+..
T Consensus       186 fg~~~~  191 (239)
T PRK01723        186 FDRGEL  191 (239)
T ss_pred             CCCccc
Confidence            997754

>PRK09982 universal stress protein UspD; Provisional

Probab=99.47  E-value=6.9e-13  Score=129.58  Aligned_cols=133  Identities=16%  Similarity=0.187  Sum_probs=95.8

Q ss_pred             CEEEEEecCCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL  122 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  122 (888)
                      ++|+||||+| +.|.+||+||++-  ..+..|+|+||.++.... ..+..++    .   .....+..++.+++.++++.
T Consensus         4 k~ILvavD~S-~~s~~al~~A~~lA~~~~a~l~llhV~~~~~~~-~~~~~~~----~---~~~~~~~~~~~~~~~l~~~~   74 (142)
T PRK09982          4 KHIGVAISGN-EEDALLVNKALELARHNDAHLTLIHIDDGLSEL-YPGIYFP----A---TEDILQLLKNKSDNKLYKLT   74 (142)
T ss_pred             eEEEEEecCC-cchHHHHHHHHHHHHHhCCeEEEEEEccCcchh-chhhhcc----c---hHHHHHHHHHHHHHHHHHHH
Confidence            6899999999 9999999999986  367799999998765321 1111111    1   12234445556667777777


Q ss_pred             HHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEe
Q 002719          123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       123 ~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~  197 (888)
                      ..+..  ..++.. +..|+|++.|+++|++.++|+||||+| ++.++|-+    + ++..|++.+  -|+|.+|.
T Consensus        75 ~~~~~--~~~~~~-v~~G~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~----~-va~~V~~~s--~~pVLvv~  138 (142)
T PRK09982         75 KNIQW--PKTKLR-IERGEMPETLLEIMQKEQCDLLVCGHH-HSFINRLM----P-AYRGMINKM--SADLLIVP  138 (142)
T ss_pred             HhcCC--CcceEE-EEecCHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH----H-HHHHHHhcC--CCCEEEec
Confidence            65542  234444 355899999999999999999999986 77777666    3 678888864  49999984

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=9.4e-15  Score=173.61  Aligned_cols=249  Identities=25%  Similarity=0.324  Sum_probs=181.0

Q ss_pred             cCCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCC--CCChhHHHHHHHHHHhcC-CCCeeeeeccc--CCceEE
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       527 ~~~f~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~--~~~~~L  598 (888)
                      ...|.+.+.||+|+|+.|-.....   ...+|.|.+....  .........|..+-..+. |+|++.+++..  .+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            346778888999999999877553   3457777665443  222334556888877887 99999999987  457789


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceeeccccCCcEEEcCCC-ceeeeccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRF  676 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH-~~~~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~  676 (888)
                      +++|..|+++.+.+...+ ....+....-.++.|+..+|.|+| .   .++.|+||||+|.+++..+ .++++|||+|..
T Consensus        99 ~~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~  174 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATA  174 (601)
T ss_pred             ccCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcc
Confidence            999999999998873111 114555677789999999999999 6   8899999999999999999 999999999988


Q ss_pred             ccc-ccccCCCccccccCCCCC-CcccCChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 002719          677 LSQ-NEISSNNTTLCCRTDPKG-TFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL  753 (888)
Q Consensus       677 ~~~-~~~~~~~~~~~~~~~~~G-t~~Y~APE~l~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~  753 (888)
                      +.. .+....      .....| ++.|+|||.+.+. ...+..|+||.|+++.-+++|..|+........... . +...
T Consensus       175 ~~~~~g~~~~------~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-~-~~~~  246 (601)
T KOG0590|consen  175 YRNKNGAERS------LKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-S-WKSN  246 (601)
T ss_pred             ccccCCccee------eecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-e-eccc
Confidence            766 322211      233457 9999999999885 456789999999999999999999965443221100 0 0000


Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       754 ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      -................+++.+++..+|..|.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~  280 (601)
T KOG0590|consen  247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSI  280 (601)
T ss_pred             ccccccCccccCChhhhhcccccccCCchhcccc
Confidence            0010011112334567889999999999999998

>PRK15118 universal stress global response regulator UspA; Provisional

Probab=99.43  E-value=1.8e-12  Score=126.75  Aligned_cols=133  Identities=16%  Similarity=0.220  Sum_probs=92.2

Q ss_pred             CEEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL  122 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  122 (888)
                      ++|+||||+| +.|..||.||++-.  .+..|+|+||.++.... ..+ ...      .....+.+...+...+.++   
T Consensus         4 ~~ILvavD~S-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~-~~~-~~~------~~~~~~~~~~~~~~~~~l~---   71 (144)
T PRK15118          4 KHILIAVDLS-PESKVLVEKAVSMARPYNAKVSLIHVDVNYSDL-YTG-LID------VNLGDMQKRISEETHHALT---   71 (144)
T ss_pred             eEEEEEccCC-hhHHHHHHHHHHHHHhhCCEEEEEEEccChhhh-hhh-hhh------cchHHHHHHHHHHHHHHHH---
Confidence            6899999999 99999999999873  46799999995432111 111 000      0112222222333333333   


Q ss_pred             HHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEe
Q 002719          123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       123 ~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~  197 (888)
                      .++...++.+...++..|+|.+.|+++|+++++|+||||+|+ +.+. .+    +.++..|++.++  |+|.+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~-~l----gSva~~v~~~a~--~pVLvv~  138 (144)
T PRK15118         72 ELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFWS-KL----MSSARQLINTVH--VDMLIVP  138 (144)
T ss_pred             HHHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHHH-HH----HHHHHHHHhhCC--CCEEEec
Confidence            344566787766666679999999999999999999999996 3333 33    367889999877  9999995

>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea

Probab=99.41  E-value=2.6e-12  Score=122.93  Aligned_cols=129  Identities=19%  Similarity=0.236  Sum_probs=104.4

Q ss_pred             EEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL  123 (888)
Q Consensus        46 ~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  123 (888)
                      +|+||||++ +.+.+||+||..-.  .+..|+++||.+++.....       .         ......+..+++++.+..
T Consensus         1 ~ILv~vd~s-~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~   63 (132)
T cd01988           1 RILVPVANP-NTARDLLELAAALARAQNGEIIPLNVIEVPNHSSP-------S---------QLEVNVQRARKLLRQAER   63 (132)
T ss_pred             CEEEecCCc-hhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCc-------c---------hhHHHHHHHHHHHHHHHH
Confidence            589999999 99999999998853  5669999999986532110       0         011234567788999999


Q ss_pred             HHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       124 ~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      .+.+.|++++..+..++++.+.||++++++++|+||||+++.+.+.+.+.   +..+..|++.++  |+|.+|
T Consensus        64 ~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~l---Gs~~~~v~~~~~--~pvlvv  131 (132)
T cd01988          64 IAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLF---GGVIDQVLESAP--CDVAVV  131 (132)
T ss_pred             HhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceec---CchHHHHHhcCC--CCEEEe
Confidence            99999999998877778999999999999999999999999888765554   667888888877  999987

Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio

>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents

Probab=99.39  E-value=4.4e-12  Score=121.20  Aligned_cols=137  Identities=20%  Similarity=0.281  Sum_probs=98.1

Q ss_pred             cCCEEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 002719           43 IEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM  120 (888)
Q Consensus        43 ~~~~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  120 (888)
                      |-++|+||||++ +.+.+|++||+...  .+..|+++||.++....+..           ....................
T Consensus         1 M~~~Ilv~~d~~-~~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~   68 (140)
T PF00582_consen    1 MYKRILVAIDGS-EESRRALRFALELAKRSGAEITLLHVIPPPPQYSFS-----------AAEDEESEEEAEEEEQARQA   68 (140)
T ss_dssp             -TSEEEEEESSS-HHHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCC-HHHHHHHHHHHHHHHhhCCeEEEEEeeccccccccc-----------cccccccccccchhhhhhhH
Confidence            457999999999 99999999999973  57899999999876332110           00011111111111111111


Q ss_pred             HHHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       121 ~~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      ....+...+.......+..+++.++|+++++++++|+||||+++++.+.+.+.   ++++..++..+|  |+|++|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~---gs~~~~l~~~~~--~pVlvv  139 (140)
T PF00582_consen   69 EAEEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLF---GSVAEKLLRHAP--CPVLVV  139 (140)
T ss_dssp             HHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSS---HHHHHHHHHHTS--SEEEEE
T ss_pred             HHHHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCc---CCHHHHHHHcCC--CCEEEe
Confidence            11555566666666777889999999999999999999999999888888664   778889999888  999997

UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....

>PRK10116 universal stress protein UspC; Provisional

Probab=99.32  E-value=3.4e-11  Score=117.26  Aligned_cols=133  Identities=17%  Similarity=0.226  Sum_probs=98.0

Q ss_pred             CEEEEEecCCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL  122 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  122 (888)
                      ++|+||||.| +.|..||++|++-  ..+..|+++||.+++....    .     ........+++...+..++.+.++ 
T Consensus         4 ~~ILv~~D~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~l~~~-   72 (142)
T PRK10116          4 SNILVAVAVT-PESQQLLAKAVSIARPVNGKISLITLASDPEMYN----Q-----FAAPMLEDLRSVMQEETQSFLDKL-   72 (142)
T ss_pred             ceEEEEccCC-cchHHHHHHHHHHHHHhCCEEEEEEEccCcccch----h-----hhHHHHHHHHHHHHHHHHHHHHHH-
Confidence            6999999999 9999999999885  2467899999987643211    1     111223444455555555555544 


Q ss_pred             HHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEe
Q 002719          123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       123 ~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~  197 (888)
                        +.+.++..+..++..|++.++|++++++.++|+||||+|+++.+.|-+    + ++..++..++  |.|+||.
T Consensus        73 --~~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~----s-~a~~v~~~~~--~pVLvv~  138 (142)
T PRK10116         73 --IQDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS----C-SAKRVIASSE--VDVLLVP  138 (142)
T ss_pred             --HHhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH----H-HHHHHHhcCC--CCEEEEe
Confidence              456677766666678999999999999999999999999998888754    2 4677777654  9999984

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.29  E-value=1.6e-12  Score=137.11  Aligned_cols=207  Identities=23%  Similarity=0.322  Sum_probs=141.6

Q ss_pred             HHHHHHHHhcCCCCeeeeecccCC-------ceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 002719          571 QQEIDILSKIRHPNLVTLVGACPE-------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHS  642 (888)
Q Consensus       571 ~~Ei~iL~~l~HpnIv~l~g~~~~-------~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~  642 (888)
                      ..=+.-|-++.|.|||+++.|+.+       ...++.||+..|+|..+|+.. .....+......+|+.||+.||.|||+
T Consensus       115 ~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs  194 (458)
T KOG1266|consen  115 RAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS  194 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc
Confidence            333455667789999999998843       356899999999999999754 334567778888999999999999999


Q ss_pred             cCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHH
Q 002719          643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG  722 (888)
Q Consensus       643 ~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlG  722 (888)
                      +.| +|+|+++..+-|++..+|-+|++--.....-.    .........+....+-++|.+||+=.....+.++|||+||
T Consensus       195 ~~P-piihgnlTc~tifiq~ngLIkig~~ap~s~h~----s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg  269 (458)
T KOG1266|consen  195 CDP-PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP----SVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG  269 (458)
T ss_pred             cCC-ccccCCcchhheeecCCceEEecccCccccch----hhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence            886 89999999999999999988875422111100    0011111112233477899999987767778899999999


Q ss_pred             HHHHHHHhCCCCC-CCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHHH
Q 002719          723 IILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       723 viL~elltG~~Pf-~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v~  792 (888)
                      +..++|..|..-- ........   +......+-.+..       ..-+.++.+|++..|..||++...+.
T Consensus       270 mcAlemailEiq~tnseS~~~~---ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  270 MCALEMAILEIQSTNSESKVEV---EENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             HHHHHHHHheeccCCCcceeeh---hhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhhc
Confidence            9999998876432 11111110   1111111111111       12356788999999999999955443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.29  E-value=7.1e-12  Score=144.67  Aligned_cols=137  Identities=23%  Similarity=0.284  Sum_probs=96.8

Q ss_pred             ceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC--------------------------h--------------hHHHH
Q 002719          534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--------------------------P--------------SEFQQ  572 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~--------------------------~--------------~~~~~  572 (888)
                      ..||.|++|.||+|++. |+.||||+.++.....                          .              -.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            57999999999999885 7899999987642110                          0              02445


Q ss_pred             HHHHHHhcC-----CCCe--eeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHhhcC
Q 002719          573 EIDILSKIR-----HPNL--VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS-VLIFLHSCK  644 (888)
Q Consensus       573 Ei~iL~~l~-----HpnI--v~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~-aL~~LH~~~  644 (888)
                      |+..+.++.     +++|  .+++..+....+|||||++|++|.+++.....  .+   ....++..++. .+..+|.  
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~--  275 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR--  275 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh--
Confidence            665555552     3332  23333233457899999999999887642211  12   23456666665 4677888  


Q ss_pred             CCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       645 ~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                       .|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       276 -~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       276 -DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             -CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence             899999999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.28  E-value=1.1e-11  Score=123.95  Aligned_cols=129  Identities=18%  Similarity=0.144  Sum_probs=99.1

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCe-eeeecccCCceEEEEEecCCCChhhhh
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLEDRL  612 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~g~~~~~~~LV~Ey~~ggsL~~~L  612 (888)
                      +.|+.|.++.||++...+..|++|+...... ....+..|+.++..+.+.++ .+++++..+..++||||++|.++....
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~   82 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTED   82 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccccc
Confidence            4689999999999999999999999765432 22357889999999865444 456666555678999999998876431


Q ss_pred             hccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          613 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       613 ~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                              .   ....++.+++.+|..||...  +.+++|+|++|.||+++ ++.++++|||.+.
T Consensus        83 --------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          83 --------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             --------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence                    1   11345678999999999943  23469999999999999 6689999999765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK11175 universal stress protein UspE; Provisional

Probab=99.26  E-value=8.1e-11  Score=129.88  Aligned_cols=141  Identities=11%  Similarity=0.111  Sum_probs=108.3

Q ss_pred             CEEEEEecCCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL  122 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  122 (888)
                      ++|+||+|+| +.|..||.||+.-  ..+..|+++||.+++.. +.++ .     .........++...+...+.|+.+.
T Consensus         4 ~~ILv~~D~s-~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~-~~~~-~-----~~~~~~~~~~~~~~~~~~~~l~~~~   75 (305)
T PRK11175          4 QNILVVIDPN-QDDQPALRRAVYLAQRNGGKITAFLPIYDFSY-EMTT-L-----LSPDEREAMRQGVISQRTAWIREQA   75 (305)
T ss_pred             ceEEEEcCCC-ccccHHHHHHHHHHHhcCCCEEEEEeccCchh-hhhc-c-----cchhHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999 9999999999985  34668999999865422 1111 1     1112223333444455667788888


Q ss_pred             HHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEec
Q 002719          123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN  198 (888)
Q Consensus       123 ~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~~  198 (888)
                      ..+...+++++..++..|++.++|+++++++++|+||||++|.+.+.+.+.   +..+..+++.++  |+|++|..
T Consensus        76 ~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~---gs~~~~l~~~~~--~pvlvv~~  146 (305)
T PRK11175         76 KPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIF---TPTDWHLLRKCP--CPVLMVKD  146 (305)
T ss_pred             HHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhcc---ChhHHHHHhcCC--CCEEEecc
Confidence            888888999998777678999999999999999999999999888877775   567788888877  99999965

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=2.4e-11  Score=138.86  Aligned_cols=245  Identities=24%  Similarity=0.263  Sum_probs=174.5

Q ss_pred             CCCccceeee--cCceEEEEEEE--C--CeEEEEEEecCC--CCCChhHHHHHHHHHHhcC-CCCeeeeecccC--CceE
Q 002719          529 NFDPSLKIGE--GGYGSIYKGLL--R--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWT  597 (888)
Q Consensus       529 ~f~~~~~LG~--G~fG~Vy~g~~--~--~~~VAIK~l~~~--~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~  597 (888)
                      .|.+...+|.  |.+|.||.+..  .  ...+|+|.-+..  .......=.+|+...++++ |+|.++.+..+.  +..+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4666778999  99999999877  3  466888874332  2233334456777777774 999999777764  4567


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeeccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS----VLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFG  672 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~----aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFG  672 (888)
                      +-+|+| +.+|..+....  ...++....+.++.+...    ||.++|.   .+++|-|+||.||++..+ ...+++|||
T Consensus       195 iqtE~~-~~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~  268 (524)
T KOG0601|consen  195 IQTELC-GESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG  268 (524)
T ss_pred             eeeccc-cchhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence            778888 57777776422  334667788888888888    9999999   899999999999999988 889999999


Q ss_pred             cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHhhcccc
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT-KEVQYALDTGKLK  751 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~-~~~~~~~~~~~~~  751 (888)
                      +...+..........   ......|...|++||.+ .+-++...|+|+||.++.+..+|..++... ......++.+.  
T Consensus       269 ~v~~i~~~~~~~~~~---~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~--  342 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFK---VSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY--  342 (524)
T ss_pred             eeEEccCCcccccee---eeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc--
Confidence            999887765433222   12344688899999987 467888999999999999999887655322 11111111111  


Q ss_pred             cccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHHH
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~v  791 (888)
                         .  ..++-...+..+...+..+++.+|..|++. +++
T Consensus       343 ---i--p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~-q~~  376 (524)
T KOG0601|consen  343 ---I--PLEFCEGGSSSLRSVTSQMLDEDPRLRLTA-QIL  376 (524)
T ss_pred             ---C--chhhhcCcchhhhhHHHHhcCcchhhhhHH-HHH
Confidence               1  111111223456669999999999999987 444

>cd00293 USP_Like Usp: Universal stress protein family

Probab=99.14  E-value=5.3e-10  Score=105.56  Aligned_cols=128  Identities=23%  Similarity=0.378  Sum_probs=101.7

Q ss_pred             EEEEEecCCccccHHHHHHHhhcC--CCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002719           46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL  123 (888)
Q Consensus        46 ~V~VAVD~s~~~S~~Al~Wal~n~--~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  123 (888)
                      +|+||+|.+ ..+..+|+||++-.  .+..|+++||.++....+.                .+.+......++.|+.+..
T Consensus         1 ~ilv~i~~~-~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~   63 (130)
T cd00293           1 RILVAVDGS-EESERALRWAARLARRLGAELVLLHVVDPPPSSAA----------------ELAELLEEEARALLEALRE   63 (130)
T ss_pred             CEEEEeCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch----------------hHHHHHHHHHHHHHHHHHH
Confidence            589999999 99999999999973  4779999999876532110                3344455667789999999


Q ss_pred             HHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEE
Q 002719          124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       124 ~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i  196 (888)
                      .|...++++...+.. +++.++|++++++.++|+||||+++++.+.+.+.   +.++..+++.  .-|+|+++
T Consensus        64 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~---~~~~~~ll~~--~~~pvliv  130 (130)
T cd00293          64 ALAEAGVKVETVVLE-GDPAEAILEAAEELGADLIVMGSRGRSGLRRLLL---GSVAERVLRH--APCPVLVV  130 (130)
T ss_pred             HHhcCCCceEEEEec-CCCHHHHHHHHHHcCCCEEEEcCCCCCccceeee---ccHHHHHHhC--CCCCEEeC
Confidence            998889998877654 6679999999999999999999999888766554   6778888887  33888764

The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.

>smart00504 Ubox Modified RING finger domain

Probab=99.13  E-value=3e-11  Score=100.74  Aligned_cols=63  Identities=57%  Similarity=0.993  Sum_probs=60.3

Q ss_pred             CCcchhhhhhhcCCccccCCccchhhhhhhhccCCCCCCCCCCCcCCCCCCCchHHHHHHHHHH
Q 002719          821 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW  884 (888)
Q Consensus       821 ~f~cPi~~evm~dP~i~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~  884 (888)
                      .|.||++.++|.||++++.|++|++..|.+|+.. +.+||+|++++...+|+||.+||++|++|
T Consensus         1 ~~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~   63 (63)
T smart00504        1 EFLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW   63 (63)
T ss_pred             CcCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence            3789999999999999999999999999999987 77999999999999999999999999998

Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.09  E-value=7.3e-11  Score=140.88  Aligned_cols=252  Identities=22%  Similarity=0.208  Sum_probs=171.5

Q ss_pred             hcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCC---CCCChhHHHHHHHHHHhcCCCCeeeeecc--cCCceEE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGA--CPEVWTL  598 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~--~~~~~~L  598 (888)
                      ....|.+.+.+-.|.++.++.+.-.+  ...++|+....   .....+....+-.++-..++|-++.....  |....+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            34466777788899999998765442  23344433221   11112233344444444456777766665  4568899


Q ss_pred             EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      |++|+.+++|...|+.   .+..+..-....+..+..++++||.   ..+.|+|++|.|+|+..+++.+++|||+.....
T Consensus       882 ~~~~~~~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg  955 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG  955 (1205)
T ss_pred             hhHHhccCCchhhhhc---CCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccc
Confidence            9999999999998843   3345555666777888999999999   669999999999999999999999998443221


Q ss_pred             ccc----c-----------------cCCCcc--ccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 002719          679 QNE----I-----------------SSNNTT--LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL  735 (888)
Q Consensus       679 ~~~----~-----------------~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf  735 (888)
                      .-.    .                 ......  ........||+.|.+||.+.+......+|+|++|+++++.++|.+||
T Consensus       956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen  956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred             cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence            110    0                 000000  01134457999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          736 GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ......+.....  ....  .....-+...+....+++...+..+|.+|-.+
T Consensus      1036 na~tpq~~f~ni--~~~~--~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a 1083 (1205)
T KOG0606|consen 1036 NAETPQQIFENI--LNRD--IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGA 1083 (1205)
T ss_pred             CCcchhhhhhcc--ccCC--CCCCCCccccChhhhhhhhhhhccCchhccCc
Confidence            765543322111  1111  11112234455678999999999999999877

>PRK11175 universal stress protein UspE; Provisional

Probab=99.08  E-value=1.2e-09  Score=120.43  Aligned_cols=137  Identities=16%  Similarity=0.250  Sum_probs=94.9

Q ss_pred             CEEEEEecCCcccc-------HHHHHHHhhc---CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Q 002719           45 DKIYVAVAKQVKES-------KSVLLWALQN---SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDM  114 (888)
Q Consensus        45 ~~V~VAVD~s~~~S-------~~Al~Wal~n---~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (888)
                      ++|+||+|.| +.+       ..||++|++-   +++..|+||||.++.....  ....+.  ..+   ..+.+..++..
T Consensus       153 ~~Ilva~D~s-~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~--~~~~~~--~~~---~~~~~~~~~~~  224 (305)
T PRK11175        153 GKILVAVNVA-SEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINI--AIELPE--FDP---SVYNDAIRGQH  224 (305)
T ss_pred             CeEEEEeCCC-CCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhc--cccccc--cch---hhHHHHHHHHH
Confidence            7999999998 543       6799999873   3367899999987543210  011111  111   12222222233


Q ss_pred             HHHHHHHHHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEE
Q 002719          115 HNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIW  194 (888)
Q Consensus       115 ~~ll~~~~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~  194 (888)
                      .+.+.++   +...++..+...+..|++.++|+++++++++|+||||+++++.+.|.+.   |.++..|+..++  |+|+
T Consensus       225 ~~~l~~~---~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~ll---GS~a~~v~~~~~--~pVL  296 (305)
T PRK11175        225 LLAMKAL---RQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFL---GNTAEHVIDHLN--CDLL  296 (305)
T ss_pred             HHHHHHH---HHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceee---cchHHHHHhcCC--CCEE
Confidence            3334443   3344666554555678999999999999999999999999999988876   677899999888  9999


Q ss_pred             EEe
Q 002719          195 FIC  197 (888)
Q Consensus       195 ~i~  197 (888)
                      +|.
T Consensus       297 vv~  299 (305)
T PRK11175        297 AIK  299 (305)
T ss_pred             EEc
Confidence            995

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.08  E-value=2.4e-10  Score=133.67  Aligned_cols=141  Identities=19%  Similarity=0.258  Sum_probs=90.3

Q ss_pred             CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--------------------------Ch--------h---
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------------------GP--------S---  568 (888)
Q Consensus       528 ~~f~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--------------------------~~--------~---  568 (888)
                      ..|+. ..||.|++|.||+|.++  |+.||||++++....                          +.        +   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            35665 67999999999999885  689999999865210                          00        1   


Q ss_pred             ---HHHHHHHHHHhcC----CCCeee---eecccCCceEEEEEecCCCChhhhhhccCCC---CCCCHHHHHHHHHHHHH
Q 002719          569 ---EFQQEIDILSKIR----HPNLVT---LVGACPEVWTLVYEYLPNGSLEDRLSCKDNS---PPLSWQTRIRIATELCS  635 (888)
Q Consensus       569 ---~~~~Ei~iL~~l~----HpnIv~---l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~---~~l~~~~~~~i~~qia~  635 (888)
                         .|.+|+..+.++.    +.+.+.   +|.-+....+|||||+.|+.|.++-.-...+   ..+....+..++.|   
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q---  275 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ---  275 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence               1344554444442    332222   2322234567999999999998742111111   11222222222333   


Q ss_pred             HHHHHhhcCCCceeeccccCCcEEEcCCC----ceeeecccccccccc
Q 002719          636 VLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFGISRFLSQ  679 (888)
Q Consensus       636 aL~~LH~~~~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~  679 (888)
                          +..   .|++|+|+||.||+++.++    .+++.|||++..++.
T Consensus       276 ----if~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        276 ----VFR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             ----HHh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                333   7899999999999999887    999999999987654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.07  E-value=1.2e-09  Score=111.79  Aligned_cols=134  Identities=16%  Similarity=0.128  Sum_probs=96.6

Q ss_pred             ceeeecCceEEEEEEEC--------CeEEEEEEecCCCC---------------------CC-hhHHH----HHHHHHHh
Q 002719          534 LKIGEGGYGSIYKGLLR--------HMQVAIKMLHPHSL---------------------QG-PSEFQ----QEIDILSK  579 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--------~~~VAIK~l~~~~~---------------------~~-~~~~~----~Ei~iL~~  579 (888)
                      ..||.|.-+.||.|...        +..+|||+.+....                     .+ ...+.    +|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            45899999999999765        26899998754210                     01 11233    79999999


Q ss_pred             cCC--CCeeeeecccCCceEEEEEecCCCChhh-hhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeccccC
Q 002719          580 IRH--PNLVTLVGACPEVWTLVYEYLPNGSLED-RLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKP  655 (888)
Q Consensus       580 l~H--pnIv~l~g~~~~~~~LV~Ey~~ggsL~~-~L~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~giiHrDLKp  655 (888)
                      +..  -++...+++  ...+|||||+.++.+.. .|.    ...++......+..+++.+|..| |.   .|||||||++
T Consensus        83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~  153 (197)
T cd05146          83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSE  153 (197)
T ss_pred             HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence            853  455556654  56789999997654322 221    12345556677889999999998 78   7999999999


Q ss_pred             CcEEEcCCCceeeecccccccc
Q 002719          656 ANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       656 ~NILl~~~~~vKL~DFGla~~~  677 (888)
                      .|||+++ +.++|+|||.+...
T Consensus       154 ~NIL~~~-~~v~iIDF~qav~~  174 (197)
T cd05146         154 YNMLWHD-GKVWFIDVSQSVEP  174 (197)
T ss_pred             HHEEEEC-CcEEEEECCCceeC
Confidence            9999974 67999999987644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.05  E-value=1.3e-09  Score=108.28  Aligned_cols=128  Identities=28%  Similarity=0.397  Sum_probs=101.5

Q ss_pred             eeeecCceEEEEEEECCeEEEEEEecCCCCCCh--------hHHHHHHHHHHhcCC--CCeeeeecccCCceEEEEEecC
Q 002719          535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--------SEFQQEIDILSKIRH--PNLVTLVGACPEVWTLVYEYLP  604 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~--------~~~~~Ei~iL~~l~H--pnIv~l~g~~~~~~~LV~Ey~~  604 (888)
                      .+++|+-+.+|.+.+.+.++++|.-.+..-..+        .+-.+|+.+|.++.-  -+...++.+.++...|+|||++
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~   82 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE   82 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence            578999999999988888888886544432221        345689999998853  4455667777888889999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      |..|.+.+...          ...++..+-.-+.-||.   .||+|+||.++||++..+. +.++|||++..
T Consensus        83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          83 GELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             ChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99999888322          25677788888899999   9999999999999998765 89999999863

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.04  E-value=1.7e-09  Score=124.81  Aligned_cols=161  Identities=19%  Similarity=0.225  Sum_probs=120.5

Q ss_pred             CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC--CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHH
Q 002719          551 HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR  628 (888)
Q Consensus       551 ~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~  628 (888)
                      +.+|.|...............+-+..|+.++||||++++..+.  ...|||+|-+  ..|..++..      ++......
T Consensus        37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~------l~~~~v~~  108 (690)
T KOG1243|consen   37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE------LGKEEVCL  108 (690)
T ss_pred             CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH------hHHHHHHH
Confidence            5678888776655433456778899999999999999999884  4679999998  357777732      33556677


Q ss_pred             HHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCcccCChhhhc
Q 002719          629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA  708 (888)
Q Consensus       629 i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~  708 (888)
                      .+.||+.||.|||+-  .+++|++|.-..|+++..|..||++|.++..........        ....--..|..|+.+.
T Consensus       109 Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~--------~~~~~~~s~~~P~~~~  178 (690)
T KOG1243|consen  109 GLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA--------KSLYLIESFDDPEEID  178 (690)
T ss_pred             HHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc--------ccchhhhcccChhhcC
Confidence            889999999999863  579999999999999999999999999886544322100        0011223466776553


Q ss_pred             cCCCCchhhHHHHHHHHHHHHhC
Q 002719          709 SGELTPKSDVYSFGIILLRLLTG  731 (888)
Q Consensus       709 ~~~~s~ksDVwSlGviL~elltG  731 (888)
                      ...  ...|.|-|||++++++.|
T Consensus       179 ~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  179 PSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             ccc--cchhhhhHHHHHHHHhCc
Confidence            322  457999999999999999

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.04  E-value=1.8e-09  Score=112.66  Aligned_cols=138  Identities=22%  Similarity=0.321  Sum_probs=108.6

Q ss_pred             ceeeecCceEEEEEEECC-eEEEEEEecCCCC-CChhHHHHHHHHHHhcCC--CCeeeeecccCC-----ceEEEEEecC
Q 002719          534 LKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRH--PNLVTLVGACPE-----VWTLVYEYLP  604 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~l~H--pnIv~l~g~~~~-----~~~LV~Ey~~  604 (888)
                      ..||.|.++.||++...+ ..+++|+...... .....+.+|+.++..+.+  .++.++++++.+     ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            468999999999998876 8899999765432 134578999999999975  345667777644     5689999999


Q ss_pred             CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 002719          605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK----------------------------------------  644 (888)
Q Consensus       605 ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~----------------------------------------  644 (888)
                      |.+|.+.+..    ..++......++.+++.+|..||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9988876521    34677788888889999999998631                                        


Q ss_pred             -------------CCceeeccccCCcEEEcC--CCceeeecccccc
Q 002719          645 -------------PHSIVHGDLKPANILLDA--NFVSKLSDFGISR  675 (888)
Q Consensus       645 -------------~~giiHrDLKp~NILl~~--~~~vKL~DFGla~  675 (888)
                                   +..++|+|+.|.||+++.  ++.+.|+||+.+.
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                         245799999999999998  6778999999765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=4.9e-10  Score=128.21  Aligned_cols=236  Identities=25%  Similarity=0.255  Sum_probs=165.9

Q ss_pred             hcCCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCCChhH--HHHHHHHHHhc-CCCCeeeeeccc--CCceE
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSE--FQQEIDILSKI-RHPNLVTLVGAC--PEVWT  597 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~~~~~~~--~~~Ei~iL~~l-~HpnIv~l~g~~--~~~~~  597 (888)
                      ...+|..+..||.|.|+.|+....+   +..+++|.+.........+  -..|+-+...+ -|.+++.++..+  .+..|
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            3557889999999999999987654   4678888876554333222  23466666555 488888876655  35677


Q ss_pred             EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCC-Cceeeeccccccc
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRF  676 (888)
Q Consensus       598 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~  676 (888)
                      +=.|||.++++...+.   ....+....++++..|++.++.++|+   ..++|+|+||+||++..+ +..+++|||++..
T Consensus       343 ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             CchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccc
Confidence            8999999998877662   22346777889999999999999998   899999999999999876 7889999998864


Q ss_pred             cccccccCCCccccccCCCCCCccc-CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAY-MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y-~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      +.-....          ..-++..| .+|.......+..+.|+||||.-+.+.++|.+.-.......         .+..
T Consensus       417 ~~~~~~~----------~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---------~i~~  477 (524)
T KOG0601|consen  417 LAFSSGV----------FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---------TIRS  477 (524)
T ss_pred             cceeccc----------ccccccccccchhhccccccccccccccccccccccccCcccCcccccce---------eeec
Confidence            2211110          01123334 35556666778899999999999999999875432211111         1111


Q ss_pred             CCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ......+... ..+..+...+...++..||.+
T Consensus       478 ~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~  508 (524)
T KOG0601|consen  478 GDTPNLPGLK-LQLQVLLKVMINPDRKRRPSA  508 (524)
T ss_pred             ccccCCCchH-HhhhhhhhhhcCCccccchhh
Confidence            1111122222 678888999999999999998

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.95  E-value=6.9e-09  Score=102.49  Aligned_cols=141  Identities=21%  Similarity=0.258  Sum_probs=102.9

Q ss_pred             ccceeeecCceEEEEEEECCeEEEEEEecCCCCCC--------hhHHHHHHHHHHhcCCCC--eeeeecccCCceEEEEE
Q 002719          532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPN--LVTLVGACPEVWTLVYE  601 (888)
Q Consensus       532 ~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~--------~~~~~~Ei~iL~~l~Hpn--Iv~l~g~~~~~~~LV~E  601 (888)
                      ....|-+|+-+.|+++.+.++.+.||.-....-..        ..+..+|+..|.++.--.  ..+++-+-.....|+||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            45678999999999999999999998643332211        245778999999885322  22333333456789999


Q ss_pred             ecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC---ceeeeccccccc
Q 002719          602 YLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFGISRF  676 (888)
Q Consensus       602 y~~g-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~  676 (888)
                      |++| .++.+++.........+ .....++..|-..+.-||.   ++||||||..+||+|..++   .+.|+|||++..
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             eccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            9987 47788775544333222 2336788999999999999   8999999999999996543   558999998754

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.95  E-value=2.4e-08  Score=109.20  Aligned_cols=254  Identities=21%  Similarity=0.305  Sum_probs=164.7

Q ss_pred             CccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhc-CCCCeee--------eecccC-CceEEEE
Q 002719          531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVT--------LVGACP-EVWTLVY  600 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~--------l~g~~~-~~~~LV~  600 (888)
                      ...+.||+||-+.+|..---+. .+.|+++....-.   -.+-+..|... .||-+-.        |+|--. ....+.|
T Consensus        14 ~~gr~LgqGgea~ly~l~e~~d-~VAKIYh~Pppa~---~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm   89 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEVRD-QVAKIYHAPPPAA---QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM   89 (637)
T ss_pred             CCCccccCCccceeeecchhhc-hhheeecCCCchH---HHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence            3466799999999995422223 3447776543321   12223333333 4664433        223222 2356778


Q ss_pred             EecCCC-Chhhhh---hccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          601 EYLPNG-SLEDRL---SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       601 Ey~~gg-sL~~~L---~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      ..+.|. .+..++   ..+...+.+.|...++.+..++.+.+-||.   +|.+-||++++|+|+++++.+.|.|-..-..
T Consensus        90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi  166 (637)
T COG4248          90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI  166 (637)
T ss_pred             ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceee
Confidence            877664 223333   223455678999999999999999999999   8999999999999999999999988543221


Q ss_pred             cccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCchhhHHHHHHHHHHHHhC-CCCCCCc-------hHHHH
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTG-RPALGIT-------KEVQY  743 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~ksDVwSlGviL~elltG-~~Pf~~~-------~~~~~  743 (888)
                      -      .+...   ....+|...|.+||...     +..-+...|.|.||+++++++.| +.||.+.       ...+.
T Consensus       167 ~------~ng~~---~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~  237 (637)
T COG4248         167 N------ANGTL---HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET  237 (637)
T ss_pred             c------cCCce---EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence            1      11111   23457999999999765     33456789999999999999886 9999542       12222


Q ss_pred             HHhhcccccc------cCCCCCCCChh-hHHHHHHHHHHHhhcC--CCCCCChHHHHHHHhcccccc
Q 002719          744 ALDTGKLKNL------LDPLAGDWPFV-QAEQLANLAMRCCEMS--RKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       744 ~~~~~~~~~~------ld~~~~~~p~~-~~~~l~~Li~~Cl~~d--P~~RPs~~~~v~~~Le~l~~~  801 (888)
                      .+..+.+..-      +.+....||.. .+..+..|..+|+...  +.-||+. +..+..|..+++.
T Consensus       238 ~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a-~aW~aAl~al~~~  303 (637)
T COG4248         238 DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTA-KAWVAALDALRQQ  303 (637)
T ss_pred             hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCH-HHHHHHHHHHHHh
Confidence            3333333222      22233344433 3568999999999854  5689998 7776777666654

>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed

Probab=98.90  E-value=7.3e-09  Score=115.34  Aligned_cols=101  Identities=12%  Similarity=0.200  Sum_probs=77.3

Q ss_pred             cCCEEEEEecCCccccHHHHHHHhhcC--C--CCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 002719           43 IEDKIYVAVAKQVKESKSVLLWALQNS--G--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHL  118 (888)
Q Consensus        43 ~~~~V~VAVD~s~~~S~~Al~Wal~n~--~--~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  118 (888)
                      |-+||+||||+| +.|.+|++.|++-.  .  +.+|++|||.++.....  +     .           ....+..++++
T Consensus         4 ~ykkILVavDGS-e~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~--~-----~-----------~~~~~~~eell   64 (357)
T PRK12652          4 AANRLLVPVADS-VTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDP--E-----G-----------QDELAAAEELL   64 (357)
T ss_pred             ccCeEEEEeCCC-HHHHHHHHHHHHHHHhcCCCCEEEEEEEecCccccc--c-----h-----------hHHHHHHHHHH
Confidence            447999999999 99999999999973  2  47999999997542210  0     0           11223445566


Q ss_pred             HHHHHHHhh------cCceeeEEEeec-------CchhhhHHHHHHHcCCCEEEEcc
Q 002719          119 DMCLLICRQ------MGVRAEKLDTES-------ESTEKGILELISHYGIRKLVMGA  162 (888)
Q Consensus       119 ~~~~~~C~~------~~V~~e~~~~e~-------~d~~~~I~~~v~~~~i~~LVmGs  162 (888)
                      +++...+.+      .||++++.++++       |+|++.|+++|+++++|+||||-
T Consensus        65 e~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~  121 (357)
T PRK12652         65 ERVEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDP  121 (357)
T ss_pred             HHHHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECC
Confidence            666666654      699999888764       89999999999999999999994

>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]

Probab=98.86  E-value=1.3e-09  Score=110.74  Aligned_cols=74  Identities=31%  Similarity=0.591  Sum_probs=70.6

Q ss_pred             CCCCCCCCcchhhhhhhcCCccccCCccchhhhhhhhccCCCCCCCCCCCcCCCCCCCchHHHHHHHHHHHHhC
Q 002719          815 RCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH  888 (888)
Q Consensus       815 ~~~~P~~f~cPi~~evm~dP~i~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~~  888 (888)
                      ..++|++++|.|+.++|++|+|+++|.||+++.|.+|+...+..+|+|+.+|...+++||++||..|..|+..|
T Consensus       205 ~rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n  278 (284)
T KOG4642|consen  205 KREVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKEN  278 (284)
T ss_pred             cccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhc
Confidence            35889999999999999999999999999999999999998889999999999999999999999999999865

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.82  E-value=1.6e-07  Score=105.58  Aligned_cols=202  Identities=21%  Similarity=0.254  Sum_probs=144.4

Q ss_pred             ceEEEEEEEC--CeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccC------CceEEEEEecCC-CChhhh
Q 002719          541 YGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTLVYEYLPN-GSLEDR  611 (888)
Q Consensus       541 fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~------~~~~LV~Ey~~g-gsL~~~  611 (888)
                      -.+.|++...  |..|++|+++............-++.++++.|+|||++..+|.      -..++||+|.++ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            3577888654  7889999997766666656667789999999999999987762      357899999986 477776


Q ss_pred             hhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          612 LSCK------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       612 L~~~------------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      ....            ..+..+++..+|.++.|+..||.++|+   .|+.-+-|.|.+||++.+.+++|+..|+...+..
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            5322            123457889999999999999999999   8999999999999999999999999887765543


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-HhhcccccccCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-LDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~~~~~ld~~~  758 (888)
                      +..                      +-+..   -.+-|.=.||.+++.|.||..--...+..... ...           
T Consensus       446 d~~----------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~-----------  489 (655)
T KOG3741|consen  446 DPT----------------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR-----------  489 (655)
T ss_pred             CCC----------------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH-----------
Confidence            220                      11111   12568889999999999996432111111110 110           


Q ss_pred             CCCChhhHHHHHHHHHHHhhcCCCC
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKS  783 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~dP~~  783 (888)
                        .-...+.++.+++.-....++.+
T Consensus       490 --I~~~yS~D~rn~v~yl~s~~~~~  512 (655)
T KOG3741|consen  490 --ITTTYSTDLRNVVEYLESLNFRE  512 (655)
T ss_pred             --hhhhhhHHHHHHHHHHHhcCccc
Confidence              11234566777777777777775

>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]

Probab=98.78  E-value=1.3e-07  Score=92.36  Aligned_cols=143  Identities=20%  Similarity=0.253  Sum_probs=104.8

Q ss_pred             cCCEEEEEec-CCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 002719           43 IEDKIYVAVA-KQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD  119 (888)
Q Consensus        43 ~~~~V~VAVD-~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  119 (888)
                      +-++|++++| ++ +.+..|+.|+++.  ..+..+.++||.++..............     ..............+.++
T Consensus         4 ~~~~il~~~d~~s-~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   77 (154)
T COG0589           4 MYKKILVAVDVGS-EAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALADA-----PIPLSEEELEEEAEELLA   77 (154)
T ss_pred             ccceEEEEeCCCC-HHHHHHHHHHHHHHHhcCCeEEEEEEecccccccccccccccc-----hhhhhHHHHHHHHHHHHH
Confidence            3479999999 99 9999999999997  3566788999987653322111111000     012233444566678888


Q ss_pred             HHHHHHhhcCcee-eEEEeecCch-hhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEe
Q 002719          120 MCLLICRQMGVRA-EKLDTESEST-EKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       120 ~~~~~C~~~~V~~-e~~~~e~~d~-~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~  197 (888)
                      .+.....+.++.. +..+.+ |++ .+.|++++.+.++|+||||++|.+.+.+.+.   +.++.+|+..++  |+|+++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~ll---Gsvs~~v~~~~~--~pVlvv~  151 (154)
T COG0589          78 EAKALAEAAGVPVVETEVVE-GSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLL---GSVAEKVLRHAP--CPVLVVR  151 (154)
T ss_pred             HHHHHHHHcCCCeeEEEEec-CCCcHHHHHHHHHHhCCCEEEECCCCCccccceee---ehhHHHHHhcCC--CCEEEEc
Confidence            8888888888885 655555 565 7999999999999999999999888888444   677888888755  9998885

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.68  E-value=1e-07  Score=97.26  Aligned_cols=124  Identities=23%  Similarity=0.256  Sum_probs=80.0

Q ss_pred             EEEEEEEC-CeEEEEEEecCCCCC---------------------C-----hhHHHHHHHHHHhcCCC--CeeeeecccC
Q 002719          543 SIYKGLLR-HMQVAIKMLHPHSLQ---------------------G-----PSEFQQEIDILSKIRHP--NLVTLVGACP  593 (888)
Q Consensus       543 ~Vy~g~~~-~~~VAIK~l~~~~~~---------------------~-----~~~~~~Ei~iL~~l~Hp--nIv~l~g~~~  593 (888)
                      .||.|... +..||||+.+.....                     .     .....+|.+.|.++..-  ++.+++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            48999874 688999987643110                     0     02356899999999755  456666543 


Q ss_pred             CceEEEEEecC--CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCceeeccccCCcEEEcCCCceeeec
Q 002719          594 EVWTLVYEYLP--NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF-LHSCKPHSIVHGDLKPANILLDANFVSKLSD  670 (888)
Q Consensus       594 ~~~~LV~Ey~~--ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~-LH~~~~~giiHrDLKp~NILl~~~~~vKL~D  670 (888)
                       ..+|||||+.  |..+..+.. .    .++......++.+++..+.. +|.   .||+||||.+.|||++++ .+.|+|
T Consensus        80 -~~~ivME~I~~~G~~~~~l~~-~----~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iID  149 (188)
T PF01163_consen   80 -RNVIVMEYIGEDGVPLPRLKD-V----DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYIID  149 (188)
T ss_dssp             -TTEEEEE--EETTEEGGCHHH-C----GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE--
T ss_pred             -CCEEEEEecCCCccchhhHHh-c----cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEEe
Confidence             4579999998  555544331 1    11234566788888885555 567   899999999999999988 899999


Q ss_pred             ccccccc
Q 002719          671 FGISRFL  677 (888)
Q Consensus       671 FGla~~~  677 (888)
                      ||.+...
T Consensus       150 f~qav~~  156 (188)
T PF01163_consen  150 FGQAVDS  156 (188)
T ss_dssp             GTTEEET
T ss_pred             cCcceec
Confidence            9987543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.67  E-value=2.3e-07  Score=100.21  Aligned_cols=136  Identities=15%  Similarity=0.075  Sum_probs=97.5

Q ss_pred             eeecCceEEEEEEECCeEEEEEEecCCCCC-----------ChhHHHHHHHHHHhcCCCCe--eeeeccc-------CCc
Q 002719          536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ-----------GPSEFQQEIDILSKIRHPNL--VTLVGAC-------PEV  595 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~-----------~~~~~~~Ei~iL~~l~HpnI--v~l~g~~-------~~~  595 (888)
                      +-......|++..+.|+.|.||........           ....+.+|...+.+|..-+|  ..++++.       ...
T Consensus        30 v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~  109 (268)
T PRK15123         30 FRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT  109 (268)
T ss_pred             EecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence            444444457788888899999977543211           11147899999988843222  2333332       124


Q ss_pred             eEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC-------CCcee
Q 002719          596 WTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------NFVSK  667 (888)
Q Consensus       596 ~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~-------~~~vK  667 (888)
                      .+||+|++++. +|.+++.... ..+.+......++.+++..+.-||.   +||+|+||++.|||++.       ++.+.
T Consensus       110 s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~  185 (268)
T PRK15123        110 SFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKLS  185 (268)
T ss_pred             eEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceEE
Confidence            67999999886 8999874221 2345566778899999999999999   99999999999999975       46899


Q ss_pred             eecccccc
Q 002719          668 LSDFGISR  675 (888)
Q Consensus       668 L~DFGla~  675 (888)
                      |+||+.+.
T Consensus       186 LIDl~r~~  193 (268)
T PRK15123        186 VIDLHRAQ  193 (268)
T ss_pred             EEECCccc
Confidence            99999774

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.48  E-value=4.4e-08  Score=113.73  Aligned_cols=151  Identities=21%  Similarity=0.317  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeeccccccccccccccCC-CccccccCCCCCCcccCChhhhcc
Q 002719          631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLAS  709 (888)
Q Consensus       631 ~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~-~~~~~~~~~~~Gt~~Y~APE~l~~  709 (888)
                      .+++.||.|+|..  .++||++|.|++|.++.++..||+.|+++........... .......-...-...|.|||++.+
T Consensus       106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            3455899999985  5799999999999999999999999998875443211100 000000011124678999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHH-hCCCCCCCchHHH-HHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCCh
Q 002719          710 GELTPKSDVYSFGIILLRLL-TGRPALGITKEVQ-YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       710 ~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~-~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~  787 (888)
                      ...+.++|+|||||++|.+. .|+.-+....... +....+..    +.....++...+.++.+=+.+++..++.-||++
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~----~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~  259 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLL----NAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL  259 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccc----ccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence            88899999999999999998 5666554332221 11111111    111112334556889999999999999999976

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.47  E-value=7.3e-07  Score=93.85  Aligned_cols=133  Identities=20%  Similarity=0.186  Sum_probs=93.9

Q ss_pred             CCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCC----------------------ChhHHHHHHHHHHhcCCC--C
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ----------------------GPSEFQQEIDILSKIRHP--N  584 (888)
Q Consensus       530 f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~----------------------~~~~~~~Ei~iL~~l~Hp--n  584 (888)
                      ..++.+||-|.-+.||.|... +.++|||.-+.....                      .....++|.++|.+|...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            456678999999999999887 789999964321100                      012356899999998654  5


Q ss_pred             eeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCC
Q 002719          585 LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF  664 (888)
Q Consensus       585 Iv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~  664 (888)
                      |.+.+++  +...+||||++|-.|...-        ++....-.|+..|+.-+.-+-.   .||||||+++-|||++++|
T Consensus       173 VP~P~~~--nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg  239 (304)
T COG0478         173 VPKPIAW--NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDG  239 (304)
T ss_pred             CCCcccc--ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCC
Confidence            5555554  4567999999986665432        1223334444555554444445   6999999999999999999


Q ss_pred             ceeeecccccc
Q 002719          665 VSKLSDFGISR  675 (888)
Q Consensus       665 ~vKL~DFGla~  675 (888)
                      .+.++||--+.
T Consensus       240 ~~~vIDwPQ~v  250 (304)
T COG0478         240 DIVVIDWPQAV  250 (304)
T ss_pred             CEEEEeCcccc
Confidence            99999997554

>PRK09902 hypothetical protein; Provisional

Probab=98.45  E-value=2.4e-06  Score=88.08  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=103.0

Q ss_pred             eeecCceEEEEEEECCeEEEEEEecCCC------CCChhHHHHHHHHHHhcCC--CCeeeeecccC-------CceEEEE
Q 002719          536 IGEGGYGSIYKGLLRHMQVAIKMLHPHS------LQGPSEFQQEIDILSKIRH--PNLVTLVGACP-------EVWTLVY  600 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~~~~VAIK~l~~~~------~~~~~~~~~Ei~iL~~l~H--pnIv~l~g~~~-------~~~~LV~  600 (888)
                      -|+||.+-|+.-.+.+..+-+|.-...-      ......|.+|+..|.+|..  -.+.+.+ ++.       -..+||+
T Consensus        26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence            5789999999988888889999765321      2245679999999999953  2244444 321       2367999


Q ss_pred             EecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCc--eeeecccccc
Q 002719          601 EYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--SKLSDFGISR  675 (888)
Q Consensus       601 Ey~~g-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~--vKL~DFGla~  675 (888)
                      |-+.| -+|.+++.... ..+.+...+..++.+++..+.-||.   .|+.|+|+.+.|||++.++.  ++++||.-++
T Consensus       105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            98864 48888874322 2346777788999999999999999   99999999999999986666  9999998655

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.40  E-value=1.4e-06  Score=90.75  Aligned_cols=104  Identities=30%  Similarity=0.345  Sum_probs=79.7

Q ss_pred             hhHHHHHHHHHHhcCCCC--eeeeecccC------CceEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 002719          567 PSEFQQEIDILSKIRHPN--LVTLVGACP------EVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVL  637 (888)
Q Consensus       567 ~~~~~~Ei~iL~~l~Hpn--Iv~l~g~~~------~~~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL  637 (888)
                      .....+|...+..|..-.  +...+++..      ...+||+|++++. +|.+++.....   ++......++.+++..+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence            446888999888884322  233333331      2457999999885 79998853221   55667789999999999


Q ss_pred             HHHhhcCCCceeeccccCCcEEEcCCC---ceeeeccccccc
Q 002719          638 IFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFGISRF  676 (888)
Q Consensus       638 ~~LH~~~~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~  676 (888)
                      .-||.   +||+|+|+++.|||++.+.   .+.|+||+.++.
T Consensus       132 ~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  132 AKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            99999   9999999999999998876   899999997664

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.20  E-value=6.3e-06  Score=85.25  Aligned_cols=135  Identities=19%  Similarity=0.213  Sum_probs=93.2

Q ss_pred             hcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhH---------HHHHHHHHHhcCC---CCeeeeeccc-
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRH---PNLVTLVGAC-  592 (888)
Q Consensus       526 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~---------~~~Ei~iL~~l~H---pnIv~l~g~~-  592 (888)
                      ..++|...+.+-......|.+-...+..+++|............         ..+.+..+..+..   ...+.++.+. 
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e  108 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE  108 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence            45678888888888888898888889999999887654332222         2234444444432   2222222221 


Q ss_pred             ------CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCce
Q 002719          593 ------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       593 ------~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~v  666 (888)
                            ....+|||||++|..|.+...       ++.    .++..+..++.-||.   .|++|+|..|.|+++++++ +
T Consensus       109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i  173 (229)
T PF06176_consen  109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-I  173 (229)
T ss_pred             eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-E
Confidence                  234568999999988877541       222    345667788999999   9999999999999999665 8


Q ss_pred             eeecccccc
Q 002719          667 KLSDFGISR  675 (888)
Q Consensus       667 KL~DFGla~  675 (888)
                      +++||+..+
T Consensus       174 ~iID~~~k~  182 (229)
T PF06176_consen  174 RIIDTQGKR  182 (229)
T ss_pred             EEEECcccc
Confidence            999998544

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.13  E-value=1.8e-05  Score=83.59  Aligned_cols=130  Identities=18%  Similarity=0.249  Sum_probs=80.9

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCC--eeeeeccc--CCceEEEEEecCCCC-h
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGAC--PEVWTLVYEYLPNGS-L  608 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~g~~--~~~~~LV~Ey~~ggs-L  608 (888)
                      ..||+|..+.||+.  .+..+++|......  ......+|.+++..+..-.  +.+.++++  .+...+|||+++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            46999999999984  35567889876532  3456789999999886433  34555554  345678999999863 2


Q ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHhhc-CCCce
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSV---------------------------------------LIFLHSC-KPHSI  648 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~i~~qia~a---------------------------------------L~~LH~~-~~~gi  648 (888)
                      ...+.       .+......++..++..                                       ..+|... ....+
T Consensus        83 ~~~~~-------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  155 (226)
T TIGR02172        83 SRIIS-------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC  155 (226)
T ss_pred             hhhhc-------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence            21110       0001111111111111                                       1222211 12357


Q ss_pred             eeccccCCcEEEcCCCceeeecccccc
Q 002719          649 VHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       649 iHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      +|+|+.|.||++++++ +.|+||+.+.
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhcC
Confidence            8999999999999888 9999999764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.12  E-value=1.4e-05  Score=83.56  Aligned_cols=140  Identities=21%  Similarity=0.295  Sum_probs=84.3

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCC--Ceeeeeccc-----CCceEEEEEecCCC
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC-----PEVWTLVYEYLPNG  606 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hp--nIv~l~g~~-----~~~~~LV~Ey~~gg  606 (888)
                      +.|+.|..+.||+....+..+++|.....  .....+.+|..+++.+...  .+.+++.++     ....+++|++++|.
T Consensus         3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~   80 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR   80 (239)
T ss_dssp             EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred             ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence            56999999999999998889999997654  3346788999999888533  345566533     22468999999998


Q ss_pred             Chhh----------------hhh---cc-CCCCCCCHHH---------HHHH------------HHHHHH-HHHHHhh--
Q 002719          607 SLED----------------RLS---CK-DNSPPLSWQT---------RIRI------------ATELCS-VLIFLHS--  642 (888)
Q Consensus       607 sL~~----------------~L~---~~-~~~~~l~~~~---------~~~i------------~~qia~-aL~~LH~--  642 (888)
                      .+..                .+.   .. ....++....         ....            ...+.. .+..++.  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (239)
T PF01636_consen   81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL  160 (239)
T ss_dssp             EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence            7777                111   11 0111111111         0000            111222 3333332  


Q ss_pred             --cCCCceeeccccCCcEEEc-CCCceeeecccccc
Q 002719          643 --CKPHSIVHGDLKPANILLD-ANFVSKLSDFGISR  675 (888)
Q Consensus       643 --~~~~giiHrDLKp~NILl~-~~~~vKL~DFGla~  675 (888)
                        ..+..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus       161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence              1346799999999999999 66666899998654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.11  E-value=9.8e-06  Score=94.74  Aligned_cols=138  Identities=21%  Similarity=0.289  Sum_probs=89.9

Q ss_pred             ceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCh------------------------------h----------HHHH
Q 002719          534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP------------------------------S----------EFQQ  572 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~------------------------------~----------~~~~  572 (888)
                      ..|+.++-|.||+|++. |+.||||+.++.-....                              +          .+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            46999999999999998 79999999877532110                              0          1334


Q ss_pred             HHHHHHhcC-----CCCe--eeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHhhcC
Q 002719          573 EIDILSKIR-----HPNL--VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV-LIFLHSCK  644 (888)
Q Consensus       573 Ei~iL~~l~-----HpnI--v~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~a-L~~LH~~~  644 (888)
                      |...+.+++     .|+|  .++|--+.....|+|||++|..+.+......  ..++.   ..++..++.+ +..+=.  
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~q~~~--  283 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLRQLLR--  283 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHHHHHh--
Confidence            444444442     2322  2223222345679999999999888753222  22442   2333333332 222222  


Q ss_pred             CCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       645 ~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                       .|++|+|..|.||+++.+|.+.+.|||+...++.
T Consensus       284 -dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         284 -DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             -cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence             5899999999999999999999999998876543

>PRK10490 sensor protein KdpD; Provisional

Probab=97.98  E-value=6.7e-05  Score=94.69  Aligned_cols=126  Identities=14%  Similarity=0.232  Sum_probs=94.5

Q ss_pred             ccccCCEEEEEecCCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 002719           40 ASVIEDKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNH  117 (888)
Q Consensus        40 ~~~~~~~V~VAVD~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  117 (888)
                      .|...++|||+|+++ .+|.+.++++.+-  .-+..+++|||.+|...      ..     +           .+ ...-
T Consensus       246 ~~~~~eriLV~v~~~-~~~~~lIr~~~rlA~~~~a~~~~l~V~~~~~~------~~-----~-----------~~-~~~~  301 (895)
T PRK10490        246 VWHTRDAILLCIGHN-TGSEKLVRTAARLAARLGSVWHAVYVETPRLH------RL-----P-----------EK-KRRA  301 (895)
T ss_pred             CCCcCCeEEEEECCC-cchHHHHHHHHHHHHhcCCCEEEEEEecCCcC------cC-----C-----------HH-HHHH
Confidence            355668999999999 9999999998876  34679999999866311      00     0           11 1233


Q ss_pred             HHHHHHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEe
Q 002719          118 LDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       118 l~~~~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~  197 (888)
                      +.++..+|++.|-++  +.+.++|+.++|+++|.++||+.||||.++++.+   +  .+++++..+++.+++ -.|+||.
T Consensus       302 l~~~~~lA~~lGa~~--~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~---~--~~~s~~~~l~r~~~~-idi~iv~  373 (895)
T PRK10490        302 ILSALRLAQELGAET--ATLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW---W--RRESFADRLARLGPD-LDLVIVA  373 (895)
T ss_pred             HHHHHHHHHHcCCEE--EEEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC---c--cCCCHHHHHHHhCCC-CCEEEEe
Confidence            445557888888774  4557899999999999999999999998876643   2  245677888888764 6999995

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.96  E-value=8.7e-05  Score=77.75  Aligned_cols=152  Identities=16%  Similarity=0.150  Sum_probs=93.7

Q ss_pred             CChhhhhhhcCCCCccce---eeecCceEEEEEEEC-CeEEEEEEecCCCCCCh-------------------hH-----
Q 002719          518 FSFSEIEGATHNFDPSLK---IGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP-------------------SE-----  569 (888)
Q Consensus       518 ~~~~ei~~~~~~f~~~~~---LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~-------------------~~-----  569 (888)
                      .+...+........+...   |..|.-+.||+|... +..||+|+++.......                   ..     
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W  114 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW  114 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence            344444444444444444   556667789998764 68899999875432111                   11     


Q ss_pred             HHHHHHHHHhcC--CCCeeeeecccCCceEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 002719          570 FQQEIDILSKIR--HPNLVTLVGACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH  646 (888)
Q Consensus       570 ~~~Ei~iL~~l~--HpnIv~l~g~~~~~~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~  646 (888)
                      ..+|+.-|.++.  +-.+.+-+++.  ...|||||+... .-.-.|    ...++.......+..++++.+.-|-..  .
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~~--~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~--a  186 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAFR--NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKE--A  186 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceeec--CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHh--c
Confidence            235777777663  22333334333  346999998543 111111    112233335667777777777766542  5


Q ss_pred             ceeeccccCCcEEEcCCCceeeeccccccccc
Q 002719          647 SIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       647 giiHrDLKp~NILl~~~~~vKL~DFGla~~~~  678 (888)
                      ++||+||+.-|||+. ++.+.|+|||-|....
T Consensus       187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             CcccccchhhheEEE-CCeEEEEECccccccC
Confidence            799999999999999 7899999999776443

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.95  E-value=3.3e-05  Score=76.68  Aligned_cols=130  Identities=20%  Similarity=0.195  Sum_probs=90.6

Q ss_pred             CccceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCeeeeecccCCceEEEEEecCCCChhh
Q 002719          531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLED  610 (888)
Q Consensus       531 ~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~LV~Ey~~ggsL~~  610 (888)
                      .....||+|.+|.||+|.+.+..+|+|+-...+  ....+..|+++|..+.--++.+=+..+.. ..+.|||+.|-.|.+
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~-~~i~me~i~G~~L~~  101 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE-DFIRMEYIDGRPLGK  101 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech-hhhhhhhhcCcchhh
Confidence            445679999999999999999999999876543  34679999999999987666543333322 234599999988877


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeecccc-CCcEEEcCCCceeeeccccccc
Q 002719          611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK-PANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLK-p~NILl~~~~~vKL~DFGla~~  676 (888)
                      .-...      +-..    ...++..-.-|..   .||-|+.|. |..++|.+++.+.|+||.-|..
T Consensus       102 ~~~~~------~rk~----l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112         102 LEIGG------DRKH----LLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhhcc------cHHH----HHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            65211      1222    3344455444555   789998886 4445554555899999998763

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.91  E-value=3.9e-05  Score=78.61  Aligned_cols=107  Identities=22%  Similarity=0.231  Sum_probs=84.5

Q ss_pred             HHHHHHHHhcCC-CCeeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcee
Q 002719          571 QQEIDILSKIRH-PNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV  649 (888)
Q Consensus       571 ~~Ei~iL~~l~H-pnIv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~gii  649 (888)
                      ..|.-+|+.+.+ +++.+++|+|..  .+|.||...+++...-.....-...+|..+.+|+.+++..+.+|++.....+.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            458888999976 699999999965  56999998776643210001112468999999999999999999987666688


Q ss_pred             eccccCCcEEEcCCCceeeecccccccccc
Q 002719          650 HGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       650 HrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      -.|++|+|+-++++|.+|++|.........
T Consensus        85 lcDv~~~nfgv~~~~~lk~iDld~v~~~~~  114 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKLIDLDDVFVEDK  114 (188)
T ss_pred             EeecchHHeEEeCCCcEEEEechhcchhHH
Confidence            899999999999999999999987765443

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.90  E-value=7.4e-05  Score=79.68  Aligned_cols=137  Identities=16%  Similarity=0.157  Sum_probs=82.5

Q ss_pred             eeecCc-eEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcC-CCCeeeeecccC--CceEEEEEecCCCChhhh
Q 002719          536 IGEGGY-GSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPNGSLEDR  611 (888)
Q Consensus       536 LG~G~f-G~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--~~~~LV~Ey~~ggsL~~~  611 (888)
                      |-.|.+ ..||+....+..+.+|+.....   ...+.+|+.++..+. +--+.+++++..  +..++|||+++|.+|...
T Consensus         6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            445555 7899987777788889876443   346788999998884 333556666653  357899999999877643


Q ss_pred             h-------------------hccCC-CCCCCHH--HHHHHHH--------------------HHHHHHHHHhh----cCC
Q 002719          612 L-------------------SCKDN-SPPLSWQ--TRIRIAT--------------------ELCSVLIFLHS----CKP  645 (888)
Q Consensus       612 L-------------------~~~~~-~~~l~~~--~~~~i~~--------------------qia~aL~~LH~----~~~  645 (888)
                      .                   +.... ..++...  .......                    .+...+..|-.    ..+
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED  162 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence            2                   10000 0111100  0000000                    01111222211    112


Q ss_pred             CceeeccccCCcEEEcCCCceeeecccccc
Q 002719          646 HSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       646 ~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      ..++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            458999999999999998888999999654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.82  E-value=3.5e-06  Score=97.08  Aligned_cols=189  Identities=19%  Similarity=0.149  Sum_probs=131.5

Q ss_pred             hhcCCCCccceeeecCceEEEEEEECCeE-EEEEEecCCCCCChhHHHHHHHHHHhcCCCC-eeeeeccc--CCceEEEE
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGAC--PEVWTLVY  600 (888)
Q Consensus       525 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~-VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn-Iv~l~g~~--~~~~~LV~  600 (888)
                      ..+.-+...+.+++|+++.+||.+...+. ...+.+..     .....-++++|.+++||| .+..++.+  ++...+++
T Consensus       239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~  313 (829)
T KOG0576|consen  239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM  313 (829)
T ss_pred             CCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence            34445566677899999999988655322 22343322     245667899999999999 66666665  34677899


Q ss_pred             EecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcCCCceeeecccccccccc
Q 002719          601 EYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       601 Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  679 (888)
                      +|+.++ +-.....  .....+...+...+...-..+|++||+   ..-+|+|    ||+..+ +..|.+||+....+..
T Consensus       314 ~i~s~~rs~~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~  383 (829)
T KOG0576|consen  314 RICSTGRSSALEMT--VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTR  383 (829)
T ss_pred             hhhcCCccccccCC--hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCc
Confidence            999877 2222110  111123333445566667788999998   3348888    777766 5779999998876654


Q ss_pred             ccccCCCccccccCCCCCCcccCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI  737 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~~  737 (888)
                      ..         ......+++.++|||....+.+..+.|+|++|+-..++.-|-+|-..
T Consensus       384 ~~---------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  384 TM---------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             cc---------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            32         12345689999999999999999999999999987888888777643

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.80  E-value=0.00014  Score=77.23  Aligned_cols=71  Identities=11%  Similarity=0.165  Sum_probs=45.7

Q ss_pred             ceeeecCce-EEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCC---CeeeeecccCC-----ceEEEEEecC
Q 002719          534 LKIGEGGYG-SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP---NLVTLVGACPE-----VWTLVYEYLP  604 (888)
Q Consensus       534 ~~LG~G~fG-~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~g~~~~-----~~~LV~Ey~~  604 (888)
                      ..|+.||.. .||+.   +..+++|+....  .....+.+|..+|..+...   .+.++++....     ..+++|++++
T Consensus         3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            457777776 48874   345777875532  2345789999999888532   23444444321     3478999999


Q ss_pred             CCChh
Q 002719          605 NGSLE  609 (888)
Q Consensus       605 ggsL~  609 (888)
                      |.++.
T Consensus        78 G~~l~   82 (235)
T cd05155          78 GETAT   82 (235)
T ss_pred             CCCCC
Confidence            97764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG2042 consensus Ubiquitin fusion degradation protein-2 [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=1.7e-05  Score=95.96  Aligned_cols=73  Identities=27%  Similarity=0.478  Sum_probs=69.0

Q ss_pred             CCCCCCCCCcchhhhhhhcCCcccc-CCccchhhhhhhhccCCCCCCCCCCCcCCCCCCCchHHHHHHHHHHHHh
Q 002719          814 ERCEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ  887 (888)
Q Consensus       814 ~~~~~P~~f~cPi~~evm~dP~i~~-~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~  887 (888)
                      ...++|++|..|+...+|.|||+.+ +|.+.+|+.|..|+.+ ..|||+.|.+|...++.||-+||..|+.|..+
T Consensus       863 ~l~dvpdef~DPlm~Tlm~dPV~LP~Srv~vDRsti~rhlLs-~~tdPFNR~pLt~d~v~pn~eLK~kI~~~~~e  936 (943)
T KOG2042|consen  863 ELGDVPDEFLDPLMSTLMSDPVVLPSSRVTVDRSTIERHLLS-DCTDPFNREPLTEDMVSPNEELKAKIRCWIKE  936 (943)
T ss_pred             HhccCchhhhCccccccCCCCccCCcccccccHHHHHHHHhc-CCCCccccccCchhhcCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999 9999999999999987 67999999999999999999999999999876

>PLN02876 acyl-CoA dehydrogenase

Probab=97.76  E-value=0.00021  Score=89.55  Aligned_cols=145  Identities=19%  Similarity=0.324  Sum_probs=89.8

Q ss_pred             cceeeecCceEEEEEEECC----eEEEEEEecCCC-CCChhHHHHHHHHHHhcC-CCCe--eeeecccCC-----ceEEE
Q 002719          533 SLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIR-HPNL--VTLVGACPE-----VWTLV  599 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~l~-HpnI--v~l~g~~~~-----~~~LV  599 (888)
                      ...|+.|.++.+|+....+    ..+++|+..... ......+.+|+.+|+.+. |++|  .+++++|.+     ..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            4568999999999877654    467777754432 123357889999999995 6665  777887743     47899


Q ss_pred             EEecCCCChhhh--------------------h---hccCCC--------CCCCH--HHHHHHH---------------H
Q 002719          600 YEYLPNGSLEDR--------------------L---SCKDNS--------PPLSW--QTRIRIA---------------T  631 (888)
Q Consensus       600 ~Ey~~ggsL~~~--------------------L---~~~~~~--------~~l~~--~~~~~i~---------------~  631 (888)
                      |||++|..+.+.                    |   +.....        .+..+  ..+..+.               .
T Consensus       123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~  202 (822)
T PLN02876        123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP  202 (822)
T ss_pred             EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence            999998654321                    1   111100        01111  1111111               1


Q ss_pred             HHHHHHHHHhhcCC--------CceeeccccCCcEEEcCC--Cceeeecccccccc
Q 002719          632 ELCSVLIFLHSCKP--------HSIVHGDLKPANILLDAN--FVSKLSDFGISRFL  677 (888)
Q Consensus       632 qia~aL~~LH~~~~--------~giiHrDLKp~NILl~~~--~~vKL~DFGla~~~  677 (888)
                      .+...+.+|....|        ..+||+|+++.|||++.+  ..+-|.||+++..-
T Consensus       203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G  258 (822)
T PLN02876        203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG  258 (822)
T ss_pred             hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence            12334566644333        259999999999999752  34579999988653

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.76  E-value=0.00011  Score=85.90  Aligned_cols=138  Identities=19%  Similarity=0.241  Sum_probs=90.6

Q ss_pred             eeeecCceEEEEEEEC-CeEEEEEEecCCCCCCh-------------------------------h------HHHHHHHH
Q 002719          535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP-------------------------------S------EFQQEIDI  576 (888)
Q Consensus       535 ~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~-------------------------------~------~~~~Ei~i  576 (888)
                      .||.-+.|.||+|..+ |..||||+-++.-....                               +      .|.+|++-
T Consensus       168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~N  247 (538)
T KOG1235|consen  168 PIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKN  247 (538)
T ss_pred             hhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHh
Confidence            5899999999999887 57899999776422110                               0      13445544


Q ss_pred             HHhc----CCCC------eeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 002719          577 LSKI----RHPN------LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH  646 (888)
Q Consensus       577 L~~l----~Hpn------Iv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~  646 (888)
                      ..++    .|-+      |.++|-.+.....|+||||+|..+.|.-.-..  ..++...+...   +.++  |++..-..
T Consensus       248 ae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i~~~---l~~~--~~~qIf~~  320 (538)
T KOG1235|consen  248 AERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDILNK---LVEA--YLEQIFKT  320 (538)
T ss_pred             HHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHHHHHH---HHHH--HHHHHHhc
Confidence            3333    3444      55556556667889999999998777543222  22444433333   3332  22222225


Q ss_pred             ceeeccccCCcEEEcC----CCceeeecccccccccc
Q 002719          647 SIVHGDLKPANILLDA----NFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       647 giiHrDLKp~NILl~~----~~~vKL~DFGla~~~~~  679 (888)
                      |++|+|=.|.||++..    ++.+.+.|||+...+..
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            7999999999999983    67899999999876654

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.65  E-value=0.00019  Score=77.23  Aligned_cols=137  Identities=16%  Similarity=0.130  Sum_probs=80.5

Q ss_pred             eeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCCe-eeeecccCCceEEEEEecCCCChhhh---
Q 002719          536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLEDR---  611 (888)
Q Consensus       536 LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~g~~~~~~~LV~Ey~~ggsL~~~---  611 (888)
                      +..|-.+.+|+....+..+++|+.......-.-...+|..+++.+....+ .++++.+.  .++||||++|..+...   
T Consensus         4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~   81 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFV   81 (256)
T ss_pred             CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCccccccccc
Confidence            55677889999887778899997654322211246789999999864333 34444443  4689999998765421   


Q ss_pred             --------------hhccC-CCCCCCHHH-HHHHHHHH---------HHHHHHHhhc-----CCCceeeccccCCcEEEc
Q 002719          612 --------------LSCKD-NSPPLSWQT-RIRIATEL---------CSVLIFLHSC-----KPHSIVHGDLKPANILLD  661 (888)
Q Consensus       612 --------------L~~~~-~~~~l~~~~-~~~i~~qi---------a~aL~~LH~~-----~~~giiHrDLKp~NILl~  661 (888)
                                    |+... ...+++... +..+..++         ...+..+-..     .+..++|+|+.|.||+++
T Consensus        82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~  161 (256)
T TIGR02721        82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT  161 (256)
T ss_pred             CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence                          11111 111222221 11211111         1112222111     123589999999999999


Q ss_pred             CCCceeeecccccc
Q 002719          662 ANFVSKLSDFGISR  675 (888)
Q Consensus       662 ~~~~vKL~DFGla~  675 (888)
                      +++ +.|+||+.+.
T Consensus       162 ~~~-~~lIDwE~a~  174 (256)
T TIGR02721       162 PQG-LKLIDWEYAS  174 (256)
T ss_pred             CCC-CEEEeccccC
Confidence            877 7899999765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK05231 homoserine kinase; Provisional

Probab=97.59  E-value=0.00059  Score=75.84  Aligned_cols=139  Identities=17%  Similarity=0.229  Sum_probs=78.4

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCCC--eeeeecc--------cCCceEEEEEec
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGA--------CPEVWTLVYEYL  603 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~g~--------~~~~~~LV~Ey~  603 (888)
                      +.|+.|....+|+....+..+++|++..   .....+..|+.++..|...+  +.+.+..        ..+..+++++|+
T Consensus        28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l  104 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQGEYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL  104 (319)
T ss_pred             chhccccccceEEEEeCCCcEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence            4467777789999877777899998762   22345556667776663211  2233321        234578999999


Q ss_pred             CCCChhh-----------hh---hccCC--------CCCCCH-HHHHH------------HH-HHHHHHHHHHhh----c
Q 002719          604 PNGSLED-----------RL---SCKDN--------SPPLSW-QTRIR------------IA-TELCSVLIFLHS----C  643 (888)
Q Consensus       604 ~ggsL~~-----------~L---~~~~~--------~~~l~~-~~~~~------------i~-~qia~aL~~LH~----~  643 (888)
                      +|..+..           .|   +....        ...+.+ .....            .+ ..+...+..+..    .
T Consensus       105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  184 (319)
T PRK05231        105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA  184 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence            9875421           11   10000        001111 11111            01 111112233321    1


Q ss_pred             CCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          644 KPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       644 ~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      -+.++||+|+.|.|||++.+...-|+||+.+.
T Consensus       185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            24689999999999999977666899999764

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.54  E-value=0.00076  Score=76.82  Aligned_cols=74  Identities=16%  Similarity=0.096  Sum_probs=56.4

Q ss_pred             ceeeecCceEEEEEEECC--eEEEEEEecCCC-------CCChhHHHHHHHHHHhcC---CCCeeeeecccCCceEEEEE
Q 002719          534 LKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS-------LQGPSEFQQEIDILSKIR---HPNLVTLVGACPEVWTLVYE  601 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~--~~VAIK~l~~~~-------~~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~~~~~LV~E  601 (888)
                      +.||.|.+..||++...+  +.|+||.-.+..       ....+++..|.+.|..+.   ..++.+++.+..+..++|||
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME  111 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME  111 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence            469999999999998875  389999854221       123567888999998873   35678888888888899999


Q ss_pred             ecCCCC
Q 002719          602 YLPNGS  607 (888)
Q Consensus       602 y~~ggs  607 (888)
                      |+++..
T Consensus       112 ~L~~~~  117 (401)
T PRK09550        112 DLSDHK  117 (401)
T ss_pred             cCCCcc
Confidence            998643

>PRK10593 hypothetical protein; Provisional

Probab=97.51  E-value=0.00095  Score=73.57  Aligned_cols=73  Identities=22%  Similarity=0.132  Sum_probs=55.2

Q ss_pred             ceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCC---CCeeeeecccC-----CceEEEEEecCC
Q 002719          534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH---PNLVTLVGACP-----EVWTLVYEYLPN  605 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H---pnIv~l~g~~~-----~~~~LV~Ey~~g  605 (888)
                      ..||.|..+.||.....+..+.+|..+.  ......+..|...|+.|.-   -.+.+++++|.     +..+||||+++|
T Consensus        20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G   97 (297)
T PRK10593         20 ECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG   97 (297)
T ss_pred             eecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence            4599999999999876666677887543  1134589999999998853   35777887663     457999999998


Q ss_pred             CCh
Q 002719          606 GSL  608 (888)
Q Consensus       606 gsL  608 (888)
                      +++
T Consensus        98 ~~~  100 (297)
T PRK10593         98 VSV  100 (297)
T ss_pred             Eec
Confidence            765

>COG5113 UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones]

Probab=97.50  E-value=8.7e-05  Score=84.47  Aligned_cols=74  Identities=27%  Similarity=0.478  Sum_probs=67.4

Q ss_pred             CCCCCCCCCCcchhhhhhhcCCcccc-CCccchhhhhhhhccCCCCCCCCCCCcCCCCCCCchHHHHHHHHHHHHh
Q 002719          813 EERCEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ  887 (888)
Q Consensus       813 ~~~~~~P~~f~cPi~~evm~dP~i~~-~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~  887 (888)
                      +...++|++|..|.+..+|.|||+.+ ++.+.+|+.|..|+.+ ..|||+++.||...+.+||-.||..|..|...
T Consensus       846 ED~GDvPDeFlDPLmftimkdPV~Lp~S~i~IDRSTikahlls-d~tDPFNRmPLtlddVtpn~eLrekIn~f~k~  920 (929)
T COG5113         846 EDMGDVPDEFLDPLMFTIMKDPVKLPTSRITIDRSTIKAHLLS-DGTDPFNRMPLTLDDVTPNAELREKINRFYKC  920 (929)
T ss_pred             hhccCCchhhhCchhhhcccCCeecccccccccHHHHHHHHhc-CCCCccccCCCchhhcCCCHHHHHHHHHHHhc
Confidence            44678999999999999999999975 7799999999999987 56999999999999999999999999998754

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.47  E-value=0.00055  Score=75.16  Aligned_cols=140  Identities=16%  Similarity=0.182  Sum_probs=86.2

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCC--Ceeeeeccc--------CCceEEEEEe
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC--------PEVWTLVYEY  602 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hp--nIv~l~g~~--------~~~~~LV~Ey  602 (888)
                      ...|..|....+|+....+..+++|+...   .....+..|+.++..|.+.  .+.+++...        .+..++|++|
T Consensus        19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~   95 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF   95 (296)
T ss_pred             eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence            34577787789999877777899998764   2345677888888888532  244544432        3345789999


Q ss_pred             cCCCChhh----hh----------hcc--C--CC----CCCCHHHHH----------HHHHHHHHHHHHHhh----cCCC
Q 002719          603 LPNGSLED----RL----------SCK--D--NS----PPLSWQTRI----------RIATELCSVLIFLHS----CKPH  646 (888)
Q Consensus       603 ~~ggsL~~----~L----------~~~--~--~~----~~l~~~~~~----------~i~~qia~aL~~LH~----~~~~  646 (888)
                      ++|..+..    .+          +..  .  ..    ....|....          .....+..++.++..    ..+.
T Consensus        96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~  175 (296)
T cd05153          96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR  175 (296)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence            99876532    00          000  0  00    011111110          011112334444443    2246


Q ss_pred             ceeeccccCCcEEEcCCCceeeecccccc
Q 002719          647 SIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       647 giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      +++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            79999999999999998778899999764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.46  E-value=0.00065  Score=71.87  Aligned_cols=72  Identities=15%  Similarity=0.187  Sum_probs=48.4

Q ss_pred             ceeeecCceEEEEEEEC---CeEEEEEEecCCCCCChhHHHHHHHHHHhcCC-CCeeeeecccCCceEEEEEecCCCCh
Q 002719          534 LKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGACPEVWTLVYEYLPNGSL  608 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~H-pnIv~l~g~~~~~~~LV~Ey~~ggsL  608 (888)
                      ..|..|-...+|+....   +..|++|+....... .-...+|+.++..+.. .-..++++.+.  ..+||||++|.++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l   79 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTL   79 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcC
Confidence            45777888899998766   467999977643221 1234579999998853 33344555443  2489999998766

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]

Probab=97.40  E-value=0.0026  Score=76.02  Aligned_cols=132  Identities=14%  Similarity=0.185  Sum_probs=99.5

Q ss_pred             cccCCEEEEEecCCccccHHHHHHHhhc--CCCCcEEEEEeeCCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 002719           41 SVIEDKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHL  118 (888)
Q Consensus        41 ~~~~~~V~VAVD~s~~~S~~Al~Wal~n--~~~~~l~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  118 (888)
                      +...++|+|+|+++ ..|..-++||-.-  .-...+..|||-.|.....                       .+....-|
T Consensus       245 ~~~~e~ilvcI~~~-~~~e~liR~a~RlA~~~~a~~~av~v~~~~~~~~-----------------------~~~~~~~l  300 (890)
T COG2205         245 WAARERILVCISGS-PGSEKLIRRAARLASRLHAKWTAVYVETPELHRL-----------------------SEKEARRL  300 (890)
T ss_pred             ccccceEEEEECCC-CchHHHHHHHHHHHHHhCCCeEEEEEeccccccc-----------------------cHHHHHHH
Confidence            55568999999999 8999999999765  3466899999987753310                       12344566


Q ss_pred             HHHHHHHhhcCceeeEEEeecCchhhhHHHHHHHcCCCEEEEccCCCchhhhhhhcchhhHHHHHhccCCCCcEEEEEec
Q 002719          119 DMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN  198 (888)
Q Consensus       119 ~~~~~~C~~~~V~~e~~~~e~~d~~~~I~~~v~~~~i~~LVmGs~~~~~~~R~~~~~~~~~a~~v~~~a~~~C~v~~i~~  198 (888)
                      .....+|++.|=  +++.+.++|++++|++++..+++.+||||-+.++-+.|.+.   ++++...+...++ ..|++|..
T Consensus       301 ~~~~~Lae~lGa--e~~~l~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~---~~l~~~L~~~~~~-idv~ii~~  374 (890)
T COG2205         301 HENLRLAEELGA--EIVTLYGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFK---GSLADRLAREAPG-IDVHIVAL  374 (890)
T ss_pred             HHHHHHHHHhCC--eEEEEeCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhc---ccHHHHHHhcCCC-ceEEEeeC
Confidence            777788877664  45566789999999999999999999999887777766664   5566666665544 68899976


Q ss_pred             Cccc
Q 002719          199 GNLI  202 (888)
Q Consensus       199 gk~~  202 (888)
                      +...
T Consensus       375 ~~~~  378 (890)
T COG2205         375 DAPP  378 (890)
T ss_pred             CCCc
Confidence            5554

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.38  E-value=0.0017  Score=71.94  Aligned_cols=141  Identities=18%  Similarity=0.209  Sum_probs=83.8

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCCCCChhHHHHHHHHHHhcCCC--Ceeeeeccc--------CCceEEEEEe
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC--------PEVWTLVYEY  602 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hp--nIv~l~g~~--------~~~~~LV~Ey  602 (888)
                      ...++.|....+|+....+..+++|+.+...  ....+..|+.++..|...  .+.+++...        .+..+++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~  104 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF  104 (307)
T ss_pred             ccccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence            4457777778999887666678899876532  244667788888887422  244444432        2356799999


Q ss_pred             cCCCChhh-----------h---hhccCCC--CC-------CCHHHHH------------HHHHHHHHHHHHHhh----c
Q 002719          603 LPNGSLED-----------R---LSCKDNS--PP-------LSWQTRI------------RIATELCSVLIFLHS----C  643 (888)
Q Consensus       603 ~~ggsL~~-----------~---L~~~~~~--~~-------l~~~~~~------------~i~~qia~aL~~LH~----~  643 (888)
                      ++|..+..           .   ++.....  .+       -.|....            .....+...+.+|..    .
T Consensus       105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~  184 (307)
T TIGR00938       105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD  184 (307)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence            99865421           1   1110000  00       0111100            001112334444532    2


Q ss_pred             CCCceeeccccCCcEEEcCCCceeeecccccc
Q 002719          644 KPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       644 ~~~giiHrDLKp~NILl~~~~~vKL~DFGla~  675 (888)
                      .+.+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            34789999999999999988877899999653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.31  E-value=6.9e-05  Score=93.51  Aligned_cols=175  Identities=14%  Similarity=0.009  Sum_probs=123.1

Q ss_pred             EEEEEecCCCCCChh-----HHHHHHHHHHhcCCCCeeeeeccc----CCceEEEEEecCCCChhhhhhcc-CCCCCCCH
Q 002719          554 VAIKMLHPHSLQGPS-----EFQQEIDILSKIRHPNLVTLVGAC----PEVWTLVYEYLPNGSLEDRLSCK-DNSPPLSW  623 (888)
Q Consensus       554 VAIK~l~~~~~~~~~-----~~~~Ei~iL~~l~HpnIv~l~g~~----~~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~  623 (888)
                      +.+|+.+....+...     ....|.+-++...|+++...+.-.    ...-+.+++|+.+|.+.+.|.+. ...+++..
T Consensus      1255 Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~ 1334 (2724)
T KOG1826|consen 1255 FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDR 1334 (2724)
T ss_pred             eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchh
Confidence            556665544333322     234455556667899888766544    23567899999999999988654 33444554


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCC--CceeeccccCCcEEEcCCCceeeeccccccccccccccCCCccccccCCCCCCccc
Q 002719          624 QTRIRIATELCSVLIFLHSCKP--HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY  701 (888)
Q Consensus       624 ~~~~~i~~qia~aL~~LH~~~~--~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y  701 (888)
                      .-+.....+......-+|....  +-.+|++||+.|.+|..+..+|++++|+.+.......        ......+++.|
T Consensus      1335 ~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s--------f~Gl~l~sp~~ 1406 (2724)
T KOG1826|consen 1335 SPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS--------FFGLELCSPIY 1406 (2724)
T ss_pred             chHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHh--------hhhhhhCCHHH
Confidence            4444444443566666665432  3368999999999999999999999999983322211        12334578899


Q ss_pred             CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 002719          702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG  736 (888)
Q Consensus       702 ~APE~l~~~~~s~ksDVwSlGviL~elltG~~Pf~  736 (888)
                      +.|++...-.++.++|+|..|+.+|...-|.++|-
T Consensus      1407 v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1407 VLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHH
Confidence            99999988899999999999999999999988883

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.15  E-value=0.0031  Score=64.86  Aligned_cols=123  Identities=25%  Similarity=0.382  Sum_probs=88.5

Q ss_pred             CCCCccceeeecCc-eEEEEEEECCeEEEEEEecC---CCC------------------CChhHHHHHHHHHHhcC---C
Q 002719          528 HNFDPSLKIGEGGY-GSIYKGLLRHMQVAIKMLHP---HSL------------------QGPSEFQQEIDILSKIR---H  582 (888)
Q Consensus       528 ~~f~~~~~LG~G~f-G~Vy~g~~~~~~VAIK~l~~---~~~------------------~~~~~~~~Ei~iL~~l~---H  582 (888)
                      .+++....||.|.- |.||++...+..+|+|++..   ...                  .-...|..|.....+|+   +
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            67889999999999 99999999999999999332   111                  00124778888877774   4


Q ss_pred             CCe--eeeeccc--C------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002719          583 PNL--VTLVGAC--P------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL  640 (888)
Q Consensus       583 pnI--v~l~g~~--~------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~L  640 (888)
                      .++  |+++|+.  .                  ..+.||.||++...            .+.    ..-+.+|.+-|..+
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~~  180 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKIL  180 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHHH
Confidence            566  8888876  1                  02357888776532            122    23345666778888


Q ss_pred             hhcCCCceeeccccCCcEEEcCCCceeeeccccc
Q 002719          641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       641 H~~~~~giiHrDLKp~NILl~~~~~vKL~DFGla  674 (888)
                      |.   .||+-+|+++.|..   +  -||+|||.+
T Consensus       181 ~k---~gI~~~Dv~~~ny~---~--G~lvDfs~~  206 (207)
T PF13095_consen  181 HK---LGIVPRDVKPRNYR---G--GKLVDFSSS  206 (207)
T ss_pred             HH---CCeeeccCcccccc---C--CEEEecccC
Confidence            98   89999999999976   2  389999964

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.13  E-value=0.0045  Score=63.89  Aligned_cols=126  Identities=24%  Similarity=0.282  Sum_probs=84.2

Q ss_pred             cceeeecCceEEEEEEECCeEEEEEEecCCC----------------CCChhHHHHHHHHHHhcC------CCCeeeeec
Q 002719          533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS----------------LQGPSEFQQEIDILSKIR------HPNLVTLVG  590 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~----------------~~~~~~~~~Ei~iL~~l~------HpnIv~l~g  590 (888)
                      ...||+|+.=.||.-- .+....||+..+..                .....+..+|+.-...+.      +.+|.+++|
T Consensus         6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             CcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            4569999999999521 23457789887765                122356777887776665      788999999


Q ss_pred             ccCC--ceEEEEEecCC------CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccccCCcEEEcC
Q 002719          591 ACPE--VWTLVYEYLPN------GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA  662 (888)
Q Consensus       591 ~~~~--~~~LV~Ey~~g------gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~giiHrDLKp~NILl~~  662 (888)
                      +...  ...+|+|.+.+      .+|.+++.    ...++. .....   +-.-..||-.   ++|+.+||+|.||++..
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~----~~~~~~-~~~~~---L~~f~~~l~~---~~Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLK----EGGLTE-ELRQA---LDEFKRYLLD---HHIVIRDLNPHNIVVQR  153 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHH----cCCccH-HHHHH---HHHHHHHHHH---cCCeecCCCcccEEEEe
Confidence            8743  56788887643      26777773    223444 33333   3334456666   77999999999999953


Q ss_pred             C---C-ceeeec
Q 002719          663 N---F-VSKLSD  670 (888)
Q Consensus       663 ~---~-~vKL~D  670 (888)
                      +   . .+.|+|
T Consensus       154 ~~~~~~~lvlID  165 (199)
T PF10707_consen  154 RDSGEFRLVLID  165 (199)
T ss_pred             cCCCceEEEEEe
Confidence            2   2 566666

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.92  E-value=0.0027  Score=69.92  Aligned_cols=73  Identities=21%  Similarity=0.326  Sum_probs=48.6

Q ss_pred             ceeeecCceEEEEEEECC--------eEEEEEEecCCCCCChhHHHHHHHHHHhcCCCC-eeeeecccCCceEEEEEecC
Q 002719          534 LKIGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACPEVWTLVYEYLP  604 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~--------~~VAIK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn-Iv~l~g~~~~~~~LV~Ey~~  604 (888)
                      +.|..|-...+|+....+        ..+++|+..... .......+|..++..+...+ ..++++++.+  .+|+||++
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~   80 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIP   80 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeC
Confidence            345666667889887653        679999976543 22345678999998885333 3355665543  46899999


Q ss_pred             CCChh
Q 002719          605 NGSLE  609 (888)
Q Consensus       605 ggsL~  609 (888)
                      |.++.
T Consensus        81 G~~l~   85 (302)
T cd05156          81 SRTLT   85 (302)
T ss_pred             CCcCC
Confidence            87764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.91  E-value=0.0023  Score=79.19  Aligned_cols=190  Identities=24%  Similarity=0.231  Sum_probs=127.8

Q ss_pred             HHHHHHHHHhcCCCCeeeeecccCCc------eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 002719          570 FQQEIDILSKIRHPNLVTLVGACPEV------WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC  643 (888)
Q Consensus       570 ~~~Ei~iL~~l~HpnIv~l~g~~~~~------~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~  643 (888)
                      ...|...+.++.|+|++.++++.-+.      ..+..+||..-++...+.   .-..++....+.+..++..||.|+|. 
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~h~-  304 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYLHS-  304 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHHHH-
Confidence            34567778888999999998875221      224567888888888773   44567888889999999999999999 


Q ss_pred             CCCceeeccccCC---cEEEcCCCceeee--ccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCch--h
Q 002719          644 KPHSIVHGDLKPA---NILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK--S  716 (888)
Q Consensus       644 ~~~giiHrDLKp~---NILl~~~~~vKL~--DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~k--s  716 (888)
                        ....|.-|...   +...+..+.+.++  ||+.+..+........         ..-+..|.+||......++.+  .
T Consensus       305 --~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~---------~~~~~~~~~~e~~~~~~~~~~r~~  373 (1351)
T KOG1035|consen  305 --LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS---------DLLAEIRNADEDLKENTAKKSRLT  373 (1351)
T ss_pred             --hccceeEEecccccccccCccceeecchhhhcccccCCCcccchh---------hcCccccccccccccccchhhhhh
Confidence              44444444444   3344555666666  8888776655433221         123556788888776655544  7


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHHhhcCCCCCCChHHH
Q 002719          717 DVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD  790 (888)
Q Consensus       717 DVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dP~~RPs~~~~  790 (888)
                      |+|.+|.++..+..|..+-.......         .+++       ......+.+...+|+.-++++|++..+.
T Consensus       374 dL~~lgll~~~~~~~~~i~~~~~~~~---------~~l~-------~~~~~~~~d~~~~~~~~~~~~Rl~~~~l  431 (1351)
T KOG1035|consen  374 DLWCLGLLLLQLSQGEDISEKSAVPV---------SLLD-------VLSTSELLDALPKCLDEDSEERLSALEL  431 (1351)
T ss_pred             HHHHHHHHHhhhhhcCcccccccchh---------hhhc-------cccchhhhhhhhhhcchhhhhccchhhh
Confidence            99999999999998875542211111         1111       1111257888899999999999998433

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.66  E-value=0.0016  Score=70.58  Aligned_cols=148  Identities=14%  Similarity=0.171  Sum_probs=96.9

Q ss_pred             CCCCChhhhhhhcC---CCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCC------------------CC----hh
Q 002719          515 FSDFSFSEIEGATH---NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL------------------QG----PS  568 (888)
Q Consensus       515 ~~~~~~~ei~~~~~---~f~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~------------------~~----~~  568 (888)
                      +.-|.+--|+...+   -+..++.||-|.-+.||.+.+. +++.++|+-.....                  .+    .-
T Consensus        76 y~GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRl  155 (465)
T KOG2268|consen   76 YAGYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRL  155 (465)
T ss_pred             eccchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHH
Confidence            34455544544333   3678889999999999999887 78888885321100                  00    01


Q ss_pred             HHHHHHHHHHhcCC-C-CeeeeecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 002719          569 EFQQEIDILSKIRH-P-NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH  646 (888)
Q Consensus       569 ~~~~Ei~iL~~l~H-p-nIv~l~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~  646 (888)
                      ...+|+..|+.|.. - -+.+.+++  ...++|||++.|..|...-.-      .+   .-.+...+..-+--|-.   +
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpiD~--~RH~Vvmelv~g~Pl~~v~~v------~d---~~~ly~~lm~~Iv~la~---~  221 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPIDH--NRHCVVMELVDGYPLRQVRHV------ED---PPTLYDDLMGLIVRLAN---H  221 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccc--cceeeHHHhhcccceeeeeec------CC---hHHHHHHHHHHHHHHHH---c
Confidence            24578888888842 1 23334443  356899999998887654311      11   12333444444555556   8


Q ss_pred             ceeeccccCCcEEEcCCCceeeeccccccc
Q 002719          647 SIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       647 giiHrDLKp~NILl~~~~~vKL~DFGla~~  676 (888)
                      |+||||..--||++++++.++++||--+..
T Consensus       222 GlIHgDFNEFNimv~dd~~i~vIDFPQmvS  251 (465)
T KOG2268|consen  222 GLIHGDFNEFNIMVKDDDKIVVIDFPQMVS  251 (465)
T ss_pred             CceecccchheeEEecCCCEEEeechHhhc
Confidence            999999999999999999999999986543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	888
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-49
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-48
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-48
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-45
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-43
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-43
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-37
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-36
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-24
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-24
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-22
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-22
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-22
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-21
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-21
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-21
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-21
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-21
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-21
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-21
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-21
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-21
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-21
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-21
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-21
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-21
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-20
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-20
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-20
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-20
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-20
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-20
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-20
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-20
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-20
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-20
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-20
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-20
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-20
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-20
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-20
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-20
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-20
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-20
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-20
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-19
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-19
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-19
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-19
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-19
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-19
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-19
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-19
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-19
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-19
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-19
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-19
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-19
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-19
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-19
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		6e-19
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-19
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		8e-19
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-18
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-18
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-18
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-18
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-18
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-18
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-18
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-18
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-18
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-18
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-18
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-18
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-18
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-18
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-18
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-18
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-18
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-18
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-18
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-18
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-18
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-18
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-18
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		6e-18
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		7e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-18
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		8e-18
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-18
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-17
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-17
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-17
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-17
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-17
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-17
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-17
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-17
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-17
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-17
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-17
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-17
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		4e-17
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-17
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-17
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-17
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-17
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		5e-17
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		6e-17
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-17
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		7e-17
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-17
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-17
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		9e-17
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-17
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-16
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-16
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		1e-16
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-16
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-16
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-16
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-16
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-16
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-16
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-16
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-16
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-16
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-16
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-16
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-16
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-16
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-16
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-16
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-16
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-16
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-16
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-16
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-16
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		6e-16
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-16
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		6e-16
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-16
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		6e-16
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-16
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		6e-16
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-16
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-16
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-16
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-16
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		6e-16
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-16
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		6e-16
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		7e-16
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		7e-16
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		7e-16
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		7e-16
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		7e-16
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-16
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-16
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		8e-16
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-16
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		8e-16
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		8e-16
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		8e-16
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		8e-16
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-16
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		8e-16
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		9e-16
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		9e-16
3a4o_X	286	Lyn Kinase Domain Length = 286		9e-16
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		9e-16
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-15
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-15
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-15
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-15
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-15
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-15
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-15
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-15
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-15
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-15
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-15
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-15
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-15
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-15
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-15
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-15
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-15
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-15
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-15
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-15
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-15
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-15
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-15
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-15
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-15
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-15
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-15
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-15
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-15
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-15
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-15
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-15
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-15
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-15
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-15
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-15
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-15
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-15
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-15
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		4e-15
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		4e-15
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-15
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-15
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-15
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-15
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-15
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-15
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		5e-15
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-15
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		5e-15
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-15
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-15
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		6e-15
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-15
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-15
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		7e-15
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		7e-15
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		7e-15
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		7e-15
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		7e-15
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-15
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		8e-15
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-15
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		8e-15
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		8e-15
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		8e-15
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		8e-15
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-14
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-14
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-14
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-14
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-14
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-14
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-14
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-14
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-14
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-14
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-14
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-14
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-14
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-14
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-14
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-14
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-14
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-14
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-14
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-14
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-14
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-14
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-14
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-14
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-14
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-14
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-14
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-14
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-14
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-14
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-14
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		3e-14
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-14
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-14
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-14
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-14
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-14
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-14
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-14
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		5e-14
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-14
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		5e-14
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		6e-14
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		6e-14
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-14
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		6e-14
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		7e-14
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		8e-14
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		9e-14
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-13
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		1e-13
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-13
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-13
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-13
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-13
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-13
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-13
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-13
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-13
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-13
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-13
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-13
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-13
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-13
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-13
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-13
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-13
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-13
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-13
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-13
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-13
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-13
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-13
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-13
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-13
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-13
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-13
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-13
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-13
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		4e-13
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-13
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-13
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		5e-13
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-13
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-13
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-13
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		6e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-13
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-13
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-13
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		6e-13
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		6e-13
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		7e-13
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		7e-13
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-13
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-13
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		8e-13
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		8e-13
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-13
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		9e-13
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		9e-13
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		9e-13
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-12
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-12
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-12
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-12
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-12
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-12
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-12
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-12
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-12
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-12
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-12
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-12
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-12
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-12
1t1h_A	78	Nmr Solution Structure Of The U Box Domain From Atp		4e-12
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		4e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-12
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-12
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-12
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		6e-12
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		6e-12
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-12
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-12
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		7e-12
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-12
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		8e-12
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		8e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-12
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		8e-12
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-12
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-11
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-11
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-11
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-11
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-11
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-11
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-11
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-11
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-11
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-11
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-11
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-11
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-11
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-11
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-11
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-11
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-11
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-11
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-11
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-11
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-11
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-11
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		3e-11
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-11
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-11
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-11
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-11
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-11
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-11
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-11
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-11
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		4e-11
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		4e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-11
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-11
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		4e-11
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		5e-11
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-11
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		5e-11
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		5e-11
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-11
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		5e-11
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		5e-11
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-11
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-11
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-11
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		6e-11
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		6e-11
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-11
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		6e-11
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-11
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		6e-11
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		6e-11
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-11
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-11
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-11
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-11
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-11
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		7e-11
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		7e-11
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		7e-11
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-11
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-11
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-11
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-11
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-11
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-11
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-11
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-11
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		8e-11
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		8e-11
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-11
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		8e-11
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-11
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-11
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		8e-11
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		9e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		9e-11
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-11
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		9e-11
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		9e-11
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		9e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-11
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		9e-11
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-10
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-10
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-10
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-10
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-10
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-10
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-10
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-10
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-10
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-10
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-10
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-10
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-10
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-10
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-10
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-10
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-10
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-10
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-10
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-10
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-10
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-10
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-10
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-10
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-10
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-10
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-10
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-10
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		4e-10
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		4e-10
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-10
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		4e-10
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-10
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-10
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-10
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-10
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-10
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		5e-10
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-10
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		6e-10
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		6e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		6e-10
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		7e-10
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		7e-10
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		7e-10
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		7e-10
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-10
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		7e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		7e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		7e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		8e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		8e-10
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-09
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-09
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-09
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-09
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-09
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-09
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		1e-09
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-09
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-09
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-09
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-09
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-09
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-09
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-09
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-09
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-09
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-09
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-09
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		2e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-09
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-09
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		3e-09
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-09
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-09
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-09
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-09
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		3e-09
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-09
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-09
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-09
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		4e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		4e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-09
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-09
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		7e-09
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-09
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		7e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-08
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-08
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-08
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-08
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-08
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-08
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-08
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-08
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-08
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-08
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-08
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		2e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-08
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-08
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-08
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-08
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-08
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-08
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-08
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-08
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		3e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-08
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		3e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-08
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-08
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		5e-08
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		5e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-08
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		6e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-08
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		6e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-08
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		7e-08
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		7e-08
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		7e-08
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		7e-08
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		7e-08
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		7e-08
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		7e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-08
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		8e-08
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		8e-08
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		8e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		8e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		8e-08
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		8e-08
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		8e-08
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		9e-08
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		9e-08
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		9e-08
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		9e-08
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		9e-08
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		9e-08
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		9e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-08
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-07
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-07
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-07
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-07
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-07
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-07
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-07
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-07
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-07
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-07
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-07
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-07
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-07
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-07
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-07
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-07
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-07
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-07
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-07
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-07
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-07
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-07
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-07
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-07
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-07
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-07
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-07
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-07
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-07
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-07
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-07
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-07
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-07
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		4e-07
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		5e-07
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		5e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-07
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-07
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-07
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-07
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		6e-07
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		6e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-07
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		8e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		8e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		8e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		8e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		9e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		9e-07
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		9e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-06
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-06
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		2e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-06
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		3e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-06
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-06
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		4e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		4e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-06
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		5e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		6e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-06
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		6e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		8e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		9e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		9e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		9e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-05
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-05
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-05
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-05
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-05
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-05
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-05
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-05
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-05
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-05
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-05
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-05
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-05
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-05
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-05
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-05
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-05
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-05
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-05
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
2oxq_C	80	Structure Of The Ubch5 :chip U-Box Complex Length =		2e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-05
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-05
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		3e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		3e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		3e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-05
3soa_A	444	Full-Length Human Camkii Length = 444		3e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		4e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		4e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		5e-05
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		5e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-05
2f42_A	179	Dimerization And U-Box Domains Of Zebrafish C-Termi		6e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-05
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		7e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-05
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		8e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		9e-05
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		1e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-04
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-04
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		1e-04
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-04
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		2e-04
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		3e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		3e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
2c2l_A	281	Crystal Structure Of The Chip U-Box E3 Ubiquitin Li		4e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-04

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  192 bits (488), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 173/307 (56%), Gaps = 31/307 (10%)
Query: 515 FSDFSFSEIEGATHNFDP------SLKIGEGGYGSIYKGLLRHMQVAIK----MLHPHSL 564
           F  FSF E++  T+NFD         K+GEGG+G +YKG + +  VA+K    M+   + 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 565 QGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLS 622
           +   +F QEI +++K +H NLV L+G   +     LVY Y+PNGSL DRLSC D +PPLS
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
           W  R +IA    + + FLH  + H I H D+K ANILLD  F +K+SDFG++R       
Sbjct: 132 WHMRCKIAQGAANGINFLH--ENHHI-HRDIKSANILLDEAFTAKISDFGLAR------A 182
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           S         +   GT AYM PE L  GE+TPKSD+YSFG++LL ++TG PA+   +E Q
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 743 YAL--------DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
             L        +   +++ +D    D      E + ++A +C    +  RP++ K V ++
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-KKVQQL 300
Query: 795 LEPMRAS 801
           L+ M AS
Sbjct: 301 LQEMTAS 307

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  191 bits (486), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 175/307 (57%), Gaps = 31/307 (10%)
Query: 515 FSDFSFSEIEGATHNFDP------SLKIGEGGYGSIYKGLLRHMQVAIK----MLHPHSL 564
           F  FSF E++  T+NFD         K+GEGG+G +YKG + +  VA+K    M+   + 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 565 QGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLS 622
           +   +F QEI +++K +H NLV L+G   +     LVY Y+PNGSL DRLSC D +PPLS
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
           W  R +IA    + + FLH  + H I H D+K ANILLD  F +K+SDFG++R   +   
Sbjct: 132 WHMRCKIAQGAANGINFLH--ENHHI-HRDIKSANILLDEAFTAKISDFGLARASEK--- 185
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
               T +  R    GT AYM PE L  GE+TPKSD+YSFG++LL ++TG PA+   +E Q
Sbjct: 186 -FAQTVMXXRI--VGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 743 YAL--------DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
             L        +   +++ +D    D      E + ++A +C    +  RP++ K V ++
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-KKVQQL 300
Query: 795 LEPMRAS 801
           L+ M AS
Sbjct: 301 LQEMTAS 307

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 172/307 (56%), Gaps = 31/307 (10%)
Query: 515 FSDFSFSEIEGATHNFDP------SLKIGEGGYGSIYKGLLRHMQVAIK----MLHPHSL 564
           F  FSF E++  T+NFD         K+GEGG+G +YKG + +  VA+K    M+   + 
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 565 QGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLS 622
           +   +F QEI +++K +H NLV L+G   +     LVY Y+PNGSL DRLSC D +PPLS
Sbjct: 66  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
           W  R +IA    + + FLH  + H I H D+K ANILLD  F +K+SDFG++R       
Sbjct: 126 WHMRCKIAQGAANGINFLH--ENHHI-HRDIKSANILLDEAFTAKISDFGLAR------A 176
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           S             GT AYM PE L  GE+TPKSD+YSFG++LL ++TG PA+   +E Q
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
Query: 743 YAL--------DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
             L        +   +++ +D    D      E + ++A +C    +  RP++ K V ++
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-KKVQQL 294
Query: 795 LEPMRAS 801
           L+ M AS
Sbjct: 295 LQEMTAS 301

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  181 bits (460), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 167/307 (54%), Gaps = 31/307 (10%)
Query: 515 FSDFSFSEIEGATHNFDP------SLKIGEGGYGSIYKGLLRHMQVAIK----MLHPHSL 564
           F  FSF E++  T+NFD         K GEGG+G +YKG + +  VA+K    M+   + 
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 565 QGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLS 622
           +   +F QEI + +K +H NLV L+G   +     LVY Y PNGSL DRLSC D +PPLS
Sbjct: 63  ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
           W  R +IA    + + FLH  + H I H D+K ANILLD  F +K+SDFG++R       
Sbjct: 123 WHXRCKIAQGAANGINFLH--ENHHI-HRDIKSANILLDEAFTAKISDFGLAR------A 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           S         +   GT AY  PE L  GE+TPKSD+YSFG++LL ++TG PA+   +E Q
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
Query: 743 YAL--------DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
             L        +   +++ +D    D      E   ++A +C    +  RP++ K V ++
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDI-KKVQQL 291
Query: 795 LEPMRAS 801
           L+   AS
Sbjct: 292 LQEXTAS 298

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 180/314 (57%), Gaps = 24/314 (7%)
Query: 501 SRKEASSSSHMPQFFS-DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKM 558
           S  +A SSS++  F S      ++E AT+NFD    IG G +G +YKG+LR   +VA+K 
Sbjct: 11  SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKD 616
             P S QG  EF+ EI+ LS  RHP+LV+L+G C E     L+Y+Y+ NG+L+  L   D
Sbjct: 71  RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 617 -NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
             +  +SW+ R+ I       L +LH+    +I+H D+K  NILLD NFV K++DFGIS+
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK 187
Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                E+   +         KGT  Y+DPE+   G LT KSDVYSFG++L  +L  R A+
Sbjct: 188 --KGTELGQTHLXXVV----KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 736 --GITKEV----QYALDT---GKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
              + +E+    ++A+++   G+L+ ++DP LA         +  + A++C  +S + RP
Sbjct: 242 VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 786 ELGKDVWRVLEPMR 799
            +G  +W++   +R
Sbjct: 302 SMGDVLWKLEYALR 315

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 180/314 (57%), Gaps = 24/314 (7%)
Query: 501 SRKEASSSSHMPQFFS-DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKM 558
           S  +A SSS++  F S      ++E AT+NFD    IG G +G +YKG+LR   +VA+K 
Sbjct: 11  SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKD 616
             P S QG  EF+ EI+ LS  RHP+LV+L+G C E     L+Y+Y+ NG+L+  L   D
Sbjct: 71  RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 617 -NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
             +  +SW+ R+ I       L +LH+    +I+H D+K  NILLD NFV K++DFGIS+
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK 187
Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                E+   +         KGT  Y+DPE+   G LT KSDVYSFG++L  +L  R A+
Sbjct: 188 --KGTELDQTHLXXVV----KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 736 --GITKEV----QYALDT---GKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
              + +E+    ++A+++   G+L+ ++DP LA         +  + A++C  +S + RP
Sbjct: 242 VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 786 ELGKDVWRVLEPMR 799
            +G  +W++   +R
Sbjct: 302 SMGDVLWKLEYALR 315

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 164/311 (52%), Gaps = 28/311 (9%)
Query: 504 EASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPH 562
           E     H+ Q    FS  E++ A+ NF     +G GG+G +YKG L     VA+K L   
Sbjct: 15  EEDPEVHLGQL-KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE 73
Query: 563 SLQGPS-EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK-DNS 618
             QG   +FQ E++++S   H NL+ L G C  P    LVY Y+ NGS+   L  + ++ 
Sbjct: 74  RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 619 PPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 677
           PPL W  R RIA      L +LH  C P  I+H D+K ANILLD  F + + DFG+++ +
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 737
              +              +GT  ++ PE+L++G+ + K+DV+ +G++LL L+TG+ A  +
Sbjct: 193 DYKDXHVXXAV-------RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 738 TK-----------EVQYALDTGKLKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +            V+  L   KL+ L+D  L G++   + EQL  +A+ C + S   RP
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 305
Query: 786 ELGKDVWRVLE 796
           ++  +V R+LE
Sbjct: 306 KM-SEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 28/311 (9%)
Query: 504 EASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG-LLRHMQVAIKMLHPH 562
           E     H+ Q    FS  E++ A+ NF     +G GG+G +YKG L     VA+K L   
Sbjct: 7   EEDPEVHLGQL-KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 563 SLQGPS-EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK-DNS 618
             QG   +FQ E++++S   H NL+ L G C  P    LVY Y+ NGS+   L  + ++ 
Sbjct: 66  RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 619 PPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 677
           PPL W  R RIA      L +LH  C P  I+H D+K ANILLD  F + + DFG+++ +
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 737
              +              +G   ++ PE+L++G+ + K+DV+ +G++LL L+TG+ A  +
Sbjct: 185 DYKDXHVXXAV-------RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237
Query: 738 TK-----------EVQYALDTGKLKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +            V+  L   KL+ L+D  L G++   + EQL  +A+ C + S   RP
Sbjct: 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
Query: 786 ELGKDVWRVLE 796
           ++  +V R+LE
Sbjct: 298 KM-SEVVRMLE 307

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 13/218 (5%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG G +G++++       VA+K+L          +EF +E+ I+ ++RHPN+V  +GA 
Sbjct: 44  KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P   ++V EYL  GSL   L        L  + R+ +A ++   + +LH+  P  IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            +LK  N+L+D  +  K+ DFG+SR  +   +SS +          GT  +M PE L   
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--------GTPEWMAPEVLRDE 214
Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
               KSDVYSFG+IL  L T +   G     Q     G
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG G +G++++       VA+K+L          +EF +E+ I+ ++RHPN+V  +GA 
Sbjct: 44  KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P   ++V EYL  GSL   L        L  + R+ +A ++   + +LH+  P  IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLK  N+L+D  +  K+ DFG+SR  +   + S            GT  +M PE L   
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--------GTPEWMAPEVLRDE 214
Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
               KSDVYSFG+IL  L T +   G     Q     G
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 252

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 138/310 (44%), Gaps = 42/310 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV 595
           +G G +G + K   R   VAIK +   S +    F  E+  LS++ HPN+V L GAC   
Sbjct: 17  VGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
             LV EY   GSL + L   +  P  +    +    +    + +LHS +P +++H DLKP
Sbjct: 75  VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 656 ANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTP 714
            N+LL A   V K+ DFG +  + Q  +++N          KG+ A+M PE       + 
Sbjct: 135 PNLLLVAGGTVLKICDFGTACDI-QTHMTNN----------KGSAAWMAPEVFEGSNYSE 183
Query: 715 KSDVYSFGIILLRLLT--------GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 766
           K DV+S+GIIL  ++T        G PA  I   V        +KNL  P          
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---------- 233
Query: 767 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 826
             + +L  RC       RP + + V  +   MR        Y  G++E  + P   + P 
Sbjct: 234 --IESLMTRCWSKDPSQRPSMEEIVKIMTHLMR--------YFPGADEPLQYPCQHSLPP 283
Query: 827 FQEVMQDPHV 836
            ++   +P+V
Sbjct: 284 GEDGRVEPYV 293

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 138/310 (44%), Gaps = 42/310 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV 595
           +G G +G + K   R   VAIK +   S +    F  E+  LS++ HPN+V L GAC   
Sbjct: 16  VGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
             LV EY   GSL + L   +  P  +    +    +    + +LHS +P +++H DLKP
Sbjct: 74  VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 656 ANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTP 714
            N+LL A   V K+ DFG +  + Q  +++N          KG+ A+M PE       + 
Sbjct: 134 PNLLLVAGGTVLKICDFGTACDI-QTHMTNN----------KGSAAWMAPEVFEGSNYSE 182
Query: 715 KSDVYSFGIILLRLLT--------GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 766
           K DV+S+GIIL  ++T        G PA  I   V        +KNL  P          
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---------- 232
Query: 767 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 826
             + +L  RC       RP + + V  +   MR        Y  G++E  + P   + P 
Sbjct: 233 --IESLMTRCWSKDPSQRPSMEEIVKIMTHLMR--------YFPGADEPLQYPCQHSLPP 282
Query: 827 FQEVMQDPHV 836
            ++   +P+V
Sbjct: 283 GEDGRVEPYV 292

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 32/281 (11%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLH--PHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           K+G GG  ++Y  +  + +++VAIK +   P   +     F++E+   S++ H N+V+++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
               E   + LV EY+   +L + +   ++  PLS  T I    ++   +   H  +   
Sbjct: 78  DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           IVH D+KP NIL+D+N   K+ DFGI++ LS+  ++  N  L       GT  Y  PE  
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-------GTVQYFSPE-Q 183
Query: 708 ASGELTPK-SDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDPLAGDWPFV 764
           A GE T + +D+YS GI+L  +L G P       V  A+      + N+   +  D P  
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP-- 241
Query: 765 QAEQLANLAMRCCEMSRKSR----PELGKDVWRVLEPMRAS 801
             + L+N+ +R  E  + +R     E+  D+  VL   RA+
Sbjct: 242 --QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 30/213 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-------FQQEIDILSKIRHPNL 585
           +IG+GG+G ++KG L   +  VAIK L     +G +E       FQ+E+ I+S + HPN+
Sbjct: 26  QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           V L G       +V E++P G L  RL   D + P+ W  ++R+  ++   + ++ +  P
Sbjct: 86  VKLYGLMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 646 HSIVHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             IVH DL+  NI L     +A   +K++DFG    LSQ  + S +  L       G F 
Sbjct: 144 -PIVHRDLRSPNIFLQSLDENAPVCAKVADFG----LSQQSVHSVSGLL-------GNFQ 191
Query: 701 YMDPEFLASGE--LTPKSDVYSFGIILLRLLTG 731
           +M PE + + E   T K+D YSF +IL  +LTG
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG 224

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 31/258 (12%)
Query: 535 KIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++     +H +VA+K + P S+   + F  E +++  ++H  LV L     
Sbjct: 22  KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 80
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E   ++ E++  GSL D L   + S  PL     I  + ++   + F+      + +H 
Sbjct: 81  KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 135
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+ A+ V K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGS 188
Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            T KSDV+SFGI+L+ ++T GR P  G++  EV  AL+ G       P   + P    E+
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----PRPENCP----EE 240
Query: 769 LANLAMRCCEMSRKSRPE 786
           L N+ MRC     K+RPE
Sbjct: 241 LYNIMMRCW----KNRPE 254

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ KIRH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 31/258 (12%)
Query: 535 KIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++     +H +VA+K + P S+   + F  E +++  ++H  LV L     
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 253
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E   ++ E++  GSL D L   + S  PL     I  + ++   + F+      + +H 
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 308
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+ A+ V K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGS 361
Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            T KSDV+SFGI+L+ ++T GR P  G++  EV  AL+ G       P   + P    E+
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----PRPENCP----EE 413
Query: 769 LANLAMRCCEMSRKSRPE 786
           L N+ MRC     K+RPE
Sbjct: 414 LYNIMMRCW----KNRPE 427

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 14  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 73  SEEPIXIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 128
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTA-------RQGAKFPIKWTAPEAALYGR 181
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 182 FTIKSDVWSFGILLTELTT 200

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 357
Query: 712 LTPKSDVYSFGIILLRLLT-GR 732
            T KSDV+SFGI+L  L T GR
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 357
Query: 712 LTPKSDVYSFGIILLRLLT-GR 732
            T KSDV+SFGI+L  L T GR
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 17  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 76  SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 131
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 184
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 185 FTIKSDVWSFGILLTELTT 203

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 387
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 440
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 441 FTIKSDVWSFGILLTELTT 459

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 99.8 bits (247), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 357
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 358 FTIKSDVWSFGILLTELTT 376

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 99.4 bits (246), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 39  KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + +V EY+P G+L D L  C  N   ++    + +AT++ S + +L   +  + 
Sbjct: 98  TLEPPFY-IVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYL---EKKNF 151
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N V K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLA 204
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
               + KSDV++FG++L  + T
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIAT 226

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 13  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 72  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 180
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 181 FTIKSDVWSFGILLTELTT 199

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVCEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 15  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 74  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 182
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 183 FTIKSDVWSFGILLTELTT 201

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 37/271 (13%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-------FQQEIDILSKIRHPNL 585
           +IG+GG+G ++KG L   +  VAIK L     +G +E       FQ+E+ I+S + HPN+
Sbjct: 26  QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           V L G       +V E++P G L  RL   D + P+ W  ++R+  ++   + ++ +  P
Sbjct: 86  VKLYGLMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 646 HSIVHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             IVH DL+  NI L     +A   +K++DFG     SQ  + S +  L       G F 
Sbjct: 144 -PIVHRDLRSPNIFLQSLDENAPVCAKVADFGT----SQQSVHSVSGLL-------GNFQ 191
Query: 701 YMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL--DP 756
           +M PE + + E   T K+D YSF +IL  +LTG          +Y+    K  N++  + 
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEG 246
Query: 757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
           L    P     +L N+   C     K RP  
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 21  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + ++ ++ S + ++      + VH 
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 188
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 21  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + ++ ++ S + ++      + VH 
Sbjct: 80  SEEPIYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTA-------RQGAKFPIKWTAPEAALYGR 188
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 37/271 (13%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-------FQQEIDILSKIRHPNL 585
           +IG+GG+G ++KG L   +  VAIK L     +G +E       FQ+E+ I+S + HPN+
Sbjct: 26  QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           V L G       +V E++P G L  RL   D + P+ W  ++R+  ++   + ++ +  P
Sbjct: 86  VKLYGLMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 646 HSIVHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             IVH DL+  NI L     +A   +K++DF     LSQ  + S +  L       G F 
Sbjct: 144 -PIVHRDLRSPNIFLQSLDENAPVCAKVADFS----LSQQSVHSVSGLL-------GNFQ 191
Query: 701 YMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL--DP 756
           +M PE + + E   T K+D YSF +IL  +LTG          +Y+    K  N++  + 
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEG 246
Query: 757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
           L    P     +L N+   C     K RP  
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL  ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 305
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG+ R +  NE ++       R   K    +  PE    G 
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 358
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 359 FTIKSDVWSFGILLTELTT 377

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  G L D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVMEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L    
Sbjct: 24  VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E    +V EY+  G L D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 83  SEEPIYIVTEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 191
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  L T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L      + +
Sbjct: 77  TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK---KNFI 131
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TFTAHAGAKFPIKWTAPESLAY 184
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 185 NKFSIKSDVWAFGVLLWEIAT 205

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L      + 
Sbjct: 79  TREPPFYIII-EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLA 185
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
             + + KSDV++FG++L  + T
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L   +  + 
Sbjct: 79  TREPPFYIII-EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNF 132
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLA 185
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
             + + KSDV++FG++L  + T
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L   +  + +
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 186
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L      + +
Sbjct: 84  TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK---KNFI 138
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 191
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L   +  + 
Sbjct: 77  TREPPFYIII-EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNF 130
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAKFPIKWTAPESLA 183
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
             + + KSDV++FG++L  + T
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L   +  + +
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 186
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 81  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 135
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 188
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 84  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 138
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 191
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L   +  + +
Sbjct: 81  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYL---EKKNFI 135
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 188
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + 
Sbjct: 80  TREPPFYIII-EFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNF 133
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAKFPIKWTAPESLA 186
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
             + + KSDV++FG++L  + T
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIAT 208

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 33  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L   +  + +
Sbjct: 92  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYL---EKKNFI 146
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 199
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 200 NKFSIKSDVWAFGVLLWEIAT 220

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 593 ---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P  + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + 
Sbjct: 84  TREPPFYIII-EFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNF 137
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLA 190
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
             + + KSDV++FG++L  + T
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT 212

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G +G +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 18  KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L      + +
Sbjct: 77  TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK---KNFI 131
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAKFPIKWTAPESLAY 184
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 185 NKFSIKSDVWAFGVLLWEIAT 205

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L   +  + +
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 186
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 83  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 137
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 190
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 191 NKFSIKSDVWAFGVLLWEIAT 211

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 84  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 138
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 191
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 186
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 84  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 138
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAKFPIKWTAPESLAY 191
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 80  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 134
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAPAGAKFPIKWTAPESLAY 187
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   +S    + +AT++ S + +L   +  + +
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYL---EKKNFI 340
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H +L   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 393
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT 414

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 593 PEV--WTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L      + +
Sbjct: 81  TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK---KNFI 135
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DL   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAPAGAKFPIKWTAPESLAY 188
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 109/201 (54%), Gaps = 18/201 (8%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 593 PE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                + ++ E++  G+L D L  C  N   ++    + +AT++ S + +L   +  + +
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYL---EKKNFI 379
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H +L   N L+  N + K++DFG+SR ++ +       T       K    +  PE LA 
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGD-------TYTAHAGAKFPIKWTAPESLAY 432
Query: 710 GELTPKSDVYSFGIILLRLLT 730
            + + KSDV++FG++L  + T
Sbjct: 433 NKFSIKSDVWAFGVLLWEIAT 453

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    + +VAIK L P ++  P  F +E  I+ K++H  LV L     
Sbjct: 16  RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS-PESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 594 E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
           E    +V EY+  GSL D L   +    L     + +A ++ + + ++      + +H D
Sbjct: 75  EEPIYIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIERM---NYIHRD 130
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+    + K++DFG++R +  NE ++       R   K    +  PE    G  
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTA-------RQGAKFPIKWTAPEAALYGRF 183
Query: 713 TPKSDVYSFGIILLRLLT 730
           T KSDV+SFGI+L  L+T
Sbjct: 184 TIKSDVWSFGILLTELVT 201

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 26  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 85  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 193
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 232

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 25  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 84  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 139
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 192
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 231

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 28  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L        L+    + +A ++   + F+      + +H D
Sbjct: 87  QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 142
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 195
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 234

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 30  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L        L+    + +A ++   + F+      + +H D
Sbjct: 89  QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 144
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 197
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 236

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 26  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L        L+    + +A ++   + F+      + +H D
Sbjct: 85  QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 193
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 232

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 15  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 74  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 129
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 182
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 221

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 187
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 21  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 80  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 135
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 188
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 227

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 187
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 22  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 81  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 136
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 189
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 228

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 29  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L        L+    + +A ++   + F+      + +H D
Sbjct: 88  QEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RNYIHRD 143
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 196
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 235

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 19  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 74
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +  +  I IA +    + +LH+    S
Sbjct: 75  GYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHA---KS 128
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 182
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITKEVQY--ALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    Q    +  G L   L  +  + 
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPEL 787
           P    +++  L   C +  R  RP  
Sbjct: 243 P----KRMKRLMAECLKKKRDERPSF 264

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTA-------REGAKFPIKWTAPEAINYGTF 187
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 31  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 86
Query: 590 G--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +  +  I IA +    + +LH+    S
Sbjct: 87  GYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHA---KS 140
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 194
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITKEVQY--ALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    Q    +  G L   L  +  + 
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPEL 787
           P    +++  L   C +  R  RP  
Sbjct: 255 P----KRMKRLMAECLKKKRDERPSF 276

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV+E++ +G L D L  +      + +T + +  ++C  + +L      S++H 
Sbjct: 73  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 180
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 31  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 86
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +  +  I IA +    + +LH+    S
Sbjct: 87  GYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHA---KS 140
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 194
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITKEVQY--ALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    Q    +  G L   L  +  + 
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPEL 787
           P    +++  L   C +  R  RP  
Sbjct: 255 P----KRMKRLMAECLKKKRDERPSF 276

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 31/275 (11%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
           IG G +G +YKG+L+       + VAIK L   ++ +   +F  E  I+ +  H N++ L
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 589 VGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            G   +     ++ EY+ NG+L+  L  KD    +     +++   L  +   +      
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-----LQLVGMLRGIAAGMKYLANM 166
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           + VH DL   NIL+++N V K+SDFG+SR L  +  ++  T     +  K    +  PE 
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT-----SGGKIPIRWTAPEA 221
Query: 707 LASGELTPKSDVYSFGIILLRLLTG--RPALGITK-EVQYALDTGKLKNLLDPLAGDWPF 763
           ++  + T  SDV+SFGI++  ++T   RP   ++  EV  A++ G       P   D P 
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG----FRLPTPMDCP- 276
Query: 764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
                +  L M+C +  R  RP+   D+  +L+ +
Sbjct: 277 ---SAIYQLMMQCWQQERARRPKFA-DIVSILDKL 307

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 15  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 70
Query: 590 G--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 71  GYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 124
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 178
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 239 P----KAMKRLMAECLKKKRDERP 258

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 43  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 98
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 99  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 152
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 206
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 267 P----KAMKRLMAECLKKKRDERP 286

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 42  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 97
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 98  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 151
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 205
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 265
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 266 P----KAMKRLMAECLKKKRDERP 285

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 128/258 (49%), Gaps = 41/258 (15%)
Query: 535 KIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++     +H +VA+K + P S+   + F  E +++  ++H  LV L     
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 247
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
            E   ++ E++  GSL D L   + S  PL     I  + ++   + F+      + +H 
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 302
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+ A+ V K++DFG++R  ++  I                  +  PE +  G 
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKFPIK-----------------WTAPEAINFGS 345
Query: 712 LTPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            T KSDV+SFGI+L+ ++T GR P  G++  EV  AL+ G       P   + P    E+
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----PRPENCP----EE 397
Query: 769 LANLAMRCCEMSRKSRPE 786
           L N+ MRC     K+RPE
Sbjct: 398 LYNIMMRCW----KNRPE 411

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 16  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H +
Sbjct: 75  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRN 130
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G  
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTF 183
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 222

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 17  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 72
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 73  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 126
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 180
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 241 P----KAMKRLMAECLKKKRDERP 260

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   S+    +F +E +++ K+ HP LV L G C 
Sbjct: 34  EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV+E++ +G L D L  +      + +T + +  ++C  + +L       ++H 
Sbjct: 93  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 147
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 200
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 201 YSSKSDVWSFGVLMWEVFS 219

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 20  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 75
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 76  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 129
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 183
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 244 P----KAMKRLMAECLKKKRDERP 263

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 12  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV+E++ +G L D L  +      + +T + +  ++C  + +L       ++H 
Sbjct: 71  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 125
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 178
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 179 YSSKSDVWSFGVLMWEVFS 197

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 20  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 75
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 76  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 129
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 183
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 244 P----KAMKRLMAECLKKKRDERP 263

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 15  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 70
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 71  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 124
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVI 178
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 239 P----KAMKRLMAECLKKKRDERP 258

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV+E++ +G L D L  +      + +T + +  ++C  + +L       ++H 
Sbjct: 73  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 127
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 180
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 17  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV+E++ +G L D L  +      + +T + +  ++C  + +L       ++H 
Sbjct: 76  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 130
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 183
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 184 YSSKSDVWSFGVLMWEVFS 202

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 43  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 98
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 99  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 152
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 206
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 267 P----KAMKRLMAECLKKKRDERP 286

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 35  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 90
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 91  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 144
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 198
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 258
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 259 P----KAMKRLMAECLKKKRDERP 278

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 39/269 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE----FQQEIDILSKIRHPNLVTLVGA 591
           IG GG+G +Y+      +VA+K       +  S+     +QE  + + ++HPN++ L G 
Sbjct: 15  IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           C   P +  LV E+   G L   LS K   P       +  A ++   + +LH      I
Sbjct: 75  CLKEPNL-CLVMEFARGGPLNRVLSGKRIPP----DILVNWAVQIARGMNYLHDEAIVPI 129
Query: 649 VHGDLKPANILLD--------ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           +H DLK +NIL+         +N + K++DFG++R         + TT   +    G +A
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-------EWHRTT---KMSAAGAYA 179
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGITK-EVQYALDTGKLKNLLDPLA 758
           +M PE + +   +  SDV+S+G++L  LLTG  P  GI    V Y +   K       LA
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-------LA 232
Query: 759 GDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
              P    E  A L   C      SRP  
Sbjct: 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSF 261

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 511 MPQFFSDFSFSEIEGATHNFDPSLKI---------GEGGYGSIYKGLL-----RHMQVAI 556
           M  F   F+F +   A   F   + I         G G +G +  G L     R + VAI
Sbjct: 7   MKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI 66
Query: 557 KMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLS 613
           K L   ++ +   +F  E  I+ +  HPN++ L G   +     ++ E++ NGSL+  L 
Sbjct: 67  KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR 126
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
             D        T I++   L  +   +      + VH DL   NIL+++N V K+SDFG+
Sbjct: 127 QNDGQ-----FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-- 731
           SRFL   E  +++ T       K    +  PE +   + T  SDV+S+GI++  +++   
Sbjct: 182 SRFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 732 RPALGITKEVQYALDTGKLKNLLDPLAGDW----PFVQAEQLANLAMRCCEMSRKSRPEL 787
           RP   +T +           ++++ +  D+    P      L  L + C +  R  RP+ 
Sbjct: 239 RPYWDMTNQ-----------DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 287
Query: 788 GKDV 791
           G+ V
Sbjct: 288 GQIV 291

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++YKG   H  VA+KML+     P  LQ    F+ E+ +L K RH N++  +
Sbjct: 15  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNILLFM 70
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G    P++  +V ++    SL   L   +    +     I IA +    + +LH+    S
Sbjct: 71  GYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KS 124
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I+H DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVI 178
Query: 708 ASGELTP---KSDVYSFGIILLRLLTGR-PALGITK--EVQYALDTGKLKNLLDPLAGDW 761
              +  P   +SDVY+FGI+L  L+TG+ P   I    ++ + +  G L   L  +  + 
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    + +  L   C +  R  RP
Sbjct: 239 P----KAMKRLMAECLKKKRDERP 258

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 509 SHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHS 563
           SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L    
Sbjct: 2   SHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRDHRDVAVKVLRADL 49
Query: 564 LQGPS---EFQQEIDILSKIRHPNLV---------TLVGACPEVWTLVYEYLPNGSLEDR 611
            + PS    F++E    + + HP +V         T  G  P +   V EY+   +L D 
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI---VMEYVDGVTLRDI 106
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
           +  +    P++ +  I +  + C  L F H    + I+H D+KPANIL+ A    K+ DF
Sbjct: 107 VHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDF 160
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GI+R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LTG
Sbjct: 161 GIARAIADSGNSVXQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 732 RP 733
            P
Sbjct: 216 EP 217

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 509 SHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHS 563
           SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L    
Sbjct: 2   SHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRLHRDVAVKVLRADL 49
Query: 564 LQGPS---EFQQEIDILSKIRHPNLVTLVGACPEVWT-------LVYEYLPNGSLEDRLS 613
            + PS    F++E    + + HP +V  V A  E  T       +V EY+   +L D + 
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVA-VYATGEAETPAGPLPYIVMEYVDGVTLRDIVH 108
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
            +    P++ +  I +  + C  L F H    + I+H D+KPANI++ A    K+ DFGI
Sbjct: 109 TEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGI 162
Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           +R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LTG P
Sbjct: 163 ARAIADSGNSVTQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 44/301 (14%)
Query: 514 FFSDFSFSEIEGATHNFDPSLK---------IGEGGYGSIYKGLL-----RHMQVAIKML 559
           F   F+F +   A   F   +          IG G +G +  G L     R + VAIK L
Sbjct: 6   FVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL 65
Query: 560 HP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA---CPEVWTLVYEYLPNGSLEDRLSCK 615
              ++ +   +F  E  I+ +  HPN++ L G    C  V  ++ EY+ NGSL+  L   
Sbjct: 66  KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-MIITEYMENGSLDAFLRKN 124
Query: 616 DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
           D        T I++   L  +   +      S VH DL   NIL+++N V K+SDFG+SR
Sbjct: 125 DGR-----FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RP 733
            L  +  ++  T        K    +  PE +A  + T  SDV+S+GI++  +++   RP
Sbjct: 180 VLEDDPEAAYTT-----RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 734 ALGIT-KEVQYALDTG-KLKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 790
              ++ ++V  A++ G +L   +D P+A          L  L + C +  R  RP+ G+ 
Sbjct: 235 YWDMSNQDVIKAIEEGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQI 284
Query: 791 V 791
           V
Sbjct: 285 V 285

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 509 SHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHS 563
           SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L    
Sbjct: 2   SHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRDHRDVAVKVLRADL 49
Query: 564 LQGPS---EFQQEIDILSKIRHPNLV---------TLVGACPEVWTLVYEYLPNGSLEDR 611
            + PS    F++E    + + HP +V         T  G  P +   V EY+   +L D 
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI---VMEYVDGVTLRDI 106
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
           +  +    P++ +  I +  + C  L F H    + I+H D+KPANI++ A    K+ DF
Sbjct: 107 VHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GI+R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LTG
Sbjct: 161 GIARAIADSGNSVTQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 732 RP 733
            P
Sbjct: 216 EP 217

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 509 SHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHS 563
           SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L    
Sbjct: 2   SHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRDHRDVAVKVLRADL 49
Query: 564 LQGPS---EFQQEIDILSKIRHPNLV---------TLVGACPEVWTLVYEYLPNGSLEDR 611
            + PS    F++E    + + HP +V         T  G  P +   V EY+   +L D 
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI---VMEYVDGVTLRDI 106
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
           +  +    P++ +  I +  + C  L F H    + I+H D+KPANI++ A    K+ DF
Sbjct: 107 VHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GI+R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LTG
Sbjct: 161 GIARAIADSGNSVTQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 732 RP 733
            P
Sbjct: 216 EP 217

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 509 SHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHS 563
           SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L    
Sbjct: 2   SHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRLHRDVAVKVLRADL 49
Query: 564 LQGPS---EFQQEIDILSKIRHPNLV---------TLVGACPEVWTLVYEYLPNGSLEDR 611
            + PS    F++E    + + HP +V         T  G  P +   V EY+   +L D 
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI---VMEYVDGVTLRDI 106
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
           +  +    P++ +  I +  + C  L F H    + I+H D+KPANI++ A    K+ DF
Sbjct: 107 VHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GI+R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LTG
Sbjct: 161 GIARAIADSGNSVTQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 732 RP 733
            P
Sbjct: 216 EP 217

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 22  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 590 GA---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           G    C  V  ++ EY+ NGSL+  L   D        T I++   L  +   +      
Sbjct: 82  GVVTKCKPV-MIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGIGSGMKYLSDM 135
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           S VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE 
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-----RGGKIPIRWTAPEA 190
Query: 707 LASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG-KLKNLLD-PLAGDW 761
           +A  + T  SDV+S+GI++  +++   RP   ++ ++V  A++ G +L   +D P+A   
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA--- 247
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
                  L  L + C +  R  RP+ G+ V
Sbjct: 248 -------LHQLMLDCWQKERSDRPKFGQIV 270

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 535 KIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G  L   +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 15  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E     LV E++ +G L D L  +      + +T + +  ++C  + +L       ++H 
Sbjct: 74  EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 128
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 181
Query: 712 LTPKSDVYSFGIILLRLLT 730
            + KSDV+SFG+++  + +
Sbjct: 182 YSSKSDVWSFGVLMWEVFS 200

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
           +FD    +G+G +G++Y    R  +  +A+K+L    L+      + ++E++I S +RHP
Sbjct: 13  DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 584 NLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N++ L G   +     L+ EY P G++   L        LS     R AT +  +   L 
Sbjct: 73  NILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSRFDEQRTATYITELANALS 126
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
            C    ++H D+KP N+LL +N   K++DFG     S +  SS  TTLC      GT  Y
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLC------GTLDY 176
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           + PE +       K D++S G++    L G P
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G +   L        LS     R AT +  +
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ------KLSKFDEQRTATYITEL 122
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 172
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 27/263 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G + +G L+        VAIK L   ++ +   EF  E  I+ +  HPN++ L 
Sbjct: 22  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 590 GACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G         ++ E++ NG+L+  L   D        T I++   L  +   +      S
Sbjct: 82  GVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLRGIASGMRYLAEMS 136
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SRFL +N   S++ T       K    +  PE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN---SSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SD +S+GI++  +++   RP   ++ ++V  A++    ++   P   D P  
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----QDYRLPPPPDCP-- 247
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP  
Sbjct: 248 --TSLHQLMLDCWQKDRNARPRF 268

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 16  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 590 GA---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           G    C  V  ++ EY+ NGSL+  L   D        T I++   L  +   +      
Sbjct: 76  GVVTKCKPV-MIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGIGSGMKYLSDM 129
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           S VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE 
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-----RGGKIPIRWTAPEA 184
Query: 707 LASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG-KLKNLLD-PLAGDW 761
           +A  + T  SDV+S+GI++  +++   RP   ++ ++V  A++ G +L   +D P+A   
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA--- 241
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
                  L  L + C +  R  RP+ G+ V
Sbjct: 242 -------LHQLMLDCWQKERSDRPKFGQIV 264

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 23  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 81  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 134
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 135 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 184
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 43/243 (17%)
Query: 508 SSHM--PQFFSD-FSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPH 562
            SHM  P   SD +   EI            +G GG   ++  + L  H  VA+K+L   
Sbjct: 18  GSHMTTPSHLSDRYELGEI------------LGFGGMSEVHLARDLRLHRDVAVKVLRAD 65
Query: 563 SLQGPS---EFQQEIDILSKIRHPNLV---------TLVGACPEVWTLVYEYLPNGSLED 610
             + PS    F++E    + + HP +V         T  G  P +   V EY+   +L D
Sbjct: 66  LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI---VMEYVDGVTLRD 122
Query: 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670
            +  +    P++ +  I +  + C  L F H    + I+H D+KPANI++ A    K+ D
Sbjct: 123 IVHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMD 176
Query: 671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           FGI+R ++ +  S   T         GT  Y+ PE      +  +SDVYS G +L  +LT
Sbjct: 177 FGIARAIADSGNSVTQTAAVI-----GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 731 GRP 733
           G P
Sbjct: 232 GEP 234

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G  G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +   E ++       R   K    +  PE +  G  
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTA-------REGAKFPIKWTAPEAINYGTF 187
Query: 713 TPKSDVYSFGIILLRLLT-GR-PALGITK-EVQYALDTG 748
           T KSDV+SFGI+L  ++T GR P  G+T  EV   L+ G
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 27/263 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G + +G L+        VAIK L   ++ +   EF  E  I+ +  HPN++ L 
Sbjct: 24  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 590 GACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G         ++ E++ NG+L+  L   D        T I++   L  +   +      S
Sbjct: 84  GVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLRGIASGMRYLAEMS 138
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SRFL +N   S++ T       K    +  PE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN---SSDPTETSSLGGKIPIRWTAPEAI 195
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SD +S+GI++  +++   RP   ++ ++V  A++    ++   P   D P  
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----QDYRLPPPPDCP-- 249
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP  
Sbjct: 250 --TSLHQLMLDCWQKDRNARPRF 270

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 31/264 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 30  IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 90  GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-----FTVIQLVGMLRGISAGMKYLSDMG 144
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTAPEAI 199
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG-KLKNLLDPLAGDWPF 763
           A  + T  SDV+S+GI++  +++   RP   +T ++V  A++ G +L + +D  A     
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAA---- 255
Query: 764 VQAEQLANLAMRCCEMSRKSRPEL 787
                L  L + C +  R SRP+ 
Sbjct: 256 -----LYQLMLDCWQKERNSRPKF 274

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++     +       M VA+K L   +L    +FQ+E ++L+ ++H ++V 
Sbjct: 22  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 588 LVGACPEV--WTLVYEYLPNGSLE--------DRLSCKDNSP-----PLSWQTRIRIATE 632
             G C +     +V+EY+ +G L         D +   D  P      L     + IA++
Sbjct: 82  FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS--SNNTTLC 690
           + S +++L S      VH DL   N L+ AN + K+ DFG+SR +   +      +T L 
Sbjct: 142 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
            R        +M PE +   + T +SDV+SFG+IL  + T
Sbjct: 199 IR--------WMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 32  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 90  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 143
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 193
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 122
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 172
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 65  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 118
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC---- 170
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 122
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 172
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  +    VA+KM+   S+    EF QE   + K+ HP LV   G C 
Sbjct: 15  ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 594 EVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           + +   +V EY+ NG L + L  + +   L     + +  ++C  + FL S   H  +H 
Sbjct: 74  KEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHR 128
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+D +   K+SDFG++R++  ++  S+  T       K    +  PE     +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT-------KFPVKWSAPEVFHYFK 181
Query: 712 LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDP-LAGDWPFVQAEQL 769
            + KSDV++FGI++  + + G+    +    +  L   +   L  P LA D        +
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD-------TI 234
Query: 770 ANLAMRCCEMSRKSRPELGKDVWRVLEPMR 799
             +   C     + RP   + +   +EP+R
Sbjct: 235 YQIMYSCWHELPEKRPTF-QQLLSSIEPLR 263

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 65  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 118
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC---- 170
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQE 573
           S+ + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E
Sbjct: 5   SKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           ++I S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT
Sbjct: 63  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTAT 116
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
            +  +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC 
Sbjct: 117 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC- 171
Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 172 -----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 208

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 524 EGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPS---EFQQEIDILS 578
           + A  +F+    +G+G +G++Y  +   R   +A+K+L    L+      + ++E++I S
Sbjct: 1   QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 61  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 114
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC      
Sbjct: 115 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC------ 164
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 201

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 512 PQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIY----KGLL---RHMQVAIKMLHPHSL 564
           PQ+FSD     I+    +     ++GEG +G ++      LL     M VA+K L   S 
Sbjct: 27  PQYFSDACVHHIK--RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE 84
Query: 565 QGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRL---------- 612
               +FQ+E ++L+ ++H ++V   G C E   L  V+EY+ +G L   L          
Sbjct: 85  SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 613 -SCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670
              +D +P PL     + +A+++ + +++L        VH DL   N L+    V K+ D
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201
Query: 671 FGISRFLSQNEIS--SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL 728
           FG+SR +   +       T L  R        +M PE +   + T +SDV+SFG++L  +
Sbjct: 202 FGMSRDIYSTDYYRVGGRTMLPIR--------WMPPESILYRKFTTESDVWSFGVVLWEI 253
Query: 729 LT 730
            T
Sbjct: 254 FT 255

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
           +FD    +G+G +G++Y    R  +  +A+K+L    L+      + ++E++I S +RHP
Sbjct: 13  DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 584 NLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N++ L G   +     L+ EY P G++   L        LS     R AT +  +   L 
Sbjct: 73  NILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSRFDEQRTATYITELANALS 126
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
            C    ++H D+KP N+LL +N   K++DFG     S +  SS   TLC      GT  Y
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLC------GTLDY 176
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           + PE +       K D++S G++    L G P
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 3   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 61  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 114
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTLC    
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLC---- 166
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 167 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 203

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 15  IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 590 GACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     ++ E++ NGSL+  L   D        T I++   L  +   +      +
Sbjct: 75  GVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYLADMN 129
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH  L   NIL+++N V K+SDFG+SRFL   E  +++ T       K    +  PE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDTGKLKNLLDPLAGDW---- 761
              + T  SDV+S+GI++  +++   RP   +T +           ++++ +  D+    
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-----------DVINAIEQDYRLPP 235
Query: 762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
           P      L  L + C +  R  RP+ G+ V
Sbjct: 236 PMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 512 PQFFSD-FSFSEIEGATHNFDPSLK---------IGEGGYGSIYKGLLR-----HMQVAI 556
           PQF+++  ++ E   A  +F   ++         IG G  G +  G LR      + VAI
Sbjct: 23  PQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI 82
Query: 557 KMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLS 613
           K L   ++ +   +F  E  I+ +  HPN++ L G      +  +V EY+ NGSL+  L 
Sbjct: 83  KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
             D        T +++   L  V   +        VH DL   N+L+D+N V K+SDFG+
Sbjct: 143 THDGQ-----FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-- 731
           SR L  +  ++  T     T  K    +  PE +A    +  SDV+SFG+++  +L    
Sbjct: 198 SRVLEDDPDAAXTT-----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 732 RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 790
           RP   +T ++V  +++ G    L  P+           L  L + C    R  RP   + 
Sbjct: 253 RPYWNMTNRDVISSVEEG--YRLPAPMG------CPHALHQLMLDCWHKDRAQRPRFSQI 304
Query: 791 V 791
           V
Sbjct: 305 V 305

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 6   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 64  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 117
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K+++FG     S +  SS  TTLC    
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLC---- 169
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 170 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 206

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLH-----PHSLQGPSEFQQEIDILSKIRHPNLVT 587
           S +IG G +G++YKG   H  VA+K+L      P   Q    F+ E+ +L K RH N++ 
Sbjct: 41  STRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQA---FRNEVAVLRKTRHVNILL 96
Query: 588 LVG-ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            +G    +   +V ++    SL   L  ++    +     I IA +    + +LH+    
Sbjct: 97  FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHA---K 151
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I+H D+K  NI L      K+ DFG++   S+   S           P G+  +M PE 
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ------VEQPTGSVLWMAPEV 205
Query: 707 LASGELTP---KSDVYSFGIILLRLLTG 731
           +   +  P   +SDVYS+GI+L  L+TG
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTG 233

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHP 583
           NF    KIG G +  +Y+   LL  + VA+K +    L   +  ++  +EID+L ++ HP
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFL 640
           N++    +  E     +V E    G L   +   K     +  +T  +   +LCS L  +
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     ++H D+KPAN+ + A  V KL D G+ RF S    ++++          GT  
Sbjct: 153 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--------GTPY 201
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           YM PE +       KSD++S G +L  +   +      K   Y+L     +    PL  D
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGS 805
                +E+L  L   C     + RP++   V+ V + M A    S
Sbjct: 262 H---YSEELRQLVNMCINPDPEKRPDVTY-VYDVAKRMHACTASS 302

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 512 PQFFSD-FSFSEIEGATHNFDPSLK---------IGEGGYGSIYKGLLR-----HMQVAI 556
           PQF+++  ++ E   A  +F   ++         IG G  G +  G LR      + VAI
Sbjct: 23  PQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI 82
Query: 557 KMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLS 613
           K L   ++ +   +F  E  I+ +  HPN++ L G      +  +V EY+ NGSL+  L 
Sbjct: 83  KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
             D        T +++   L  V   +        VH DL   N+L+D+N V K+SDFG+
Sbjct: 143 THDGQ-----FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-- 731
           SR L  +  ++  T     T  K    +  PE +A    +  SDV+SFG+++  +L    
Sbjct: 198 SRVLEDDPDAAYTT-----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 732 RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 790
           RP   +T ++V  +++ G    L  P+           L  L + C    R  RP   + 
Sbjct: 253 RPYWNMTNRDVISSVEEG--YRLPAPMG------CPHALHQLMLDCWHKDRAQRPRFSQI 304
Query: 791 V 791
           V
Sbjct: 305 V 305

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 24  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 84  GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 138
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 193
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 245
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKF 268

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 41  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 155
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 210
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 262
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKF 285

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I + + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 51  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 165
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 220
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 272
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKF 295

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 63  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 116
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS   TLC    
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLC---- 168
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 63  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 116
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC    
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLC---- 168
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 122
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 123 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 173
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 229
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 262

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 67  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 120
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLC---- 172
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 173 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 65  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 118
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K+++FG     S +  SS  TTLC    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLC---- 170
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 20/198 (10%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE- 594
           IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G   E 
Sbjct: 29  IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
                +V EY+  GSL D L  +  S  L     ++ + ++C  + +L     ++ VH D
Sbjct: 87  KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG---NNFVHRD 142
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L   N+L+  + V+K+SDFG+++     E SS   T       K    +  PE L   + 
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDT------GKLPVKWTAPEALREKKF 191
Query: 713 TPKSDVYSFGIILLRLLT 730
           + KSDV+SFGI+L  + +
Sbjct: 192 STKSDVWSFGILLWEIYS 209

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 96  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 150
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 151 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 203
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 263
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 264 ------LYEVMLKCWHPKAEMRPSFSELVSRI 289

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTL- 588
           +L +G  G   + K  L   +VA+K+L+     SL    + ++EI  L   RHP+++ L 
Sbjct: 23  TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V + P    +V EY+  G L D + CK+    L  +   R+  ++ S + +   C  H 
Sbjct: 83  QVISTPSDIFMVMEYVSGGELFDYI-CKNGR--LDEKESRRLFQQILSGVDY---CHRHM 136
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +VH DLKP N+LLDA+  +K++DFG+S  +S  E    +          G+  Y  PE +
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---------GSPNYAAPEVI 187
Query: 708 ASGELT--PKSDVYSFGIILLRLLTG 731
            SG L   P+ D++S G+IL  LL G
Sbjct: 188 -SGRLYAGPEVDIWSSGVILYALLCG 212

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 117
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC      
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELC------ 167
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 98  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 205
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 265
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 99  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 154 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 206
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 266
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 267 ------LYEVMLKCWHPKAEMRPSFSELVSRI 292

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE- 594
           IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G   E 
Sbjct: 14  IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
                +V EY+  GSL D L  +  S  L     ++ + ++C  + +L     ++ VH D
Sbjct: 72  KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG---NNFVHRD 127
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L   N+L+  + V+K+SDFG+++     E SS   T       K    +  PE L   + 
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDT------GKLPVKWTAPEALREKKF 176
Query: 713 TPKSDVYSFGIILLRLLT-GR 732
           + KSDV+SFGI+L  + + GR
Sbjct: 177 STKSDVWSFGILLWEIYSFGR 197

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 98  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 205
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 265
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 157 GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 211
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 212 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 264
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 324
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 325 ------LYEVMLKCWHPKAEMRPSFSELVSRI 350

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS  T LC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G   +  +VA+K L P ++   + F +E +++  ++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 78
Query: 594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
             E   ++ EY+  GSL D L   +    L     I  + ++   + ++      + +H 
Sbjct: 79  REEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIER---KNYIHR 134
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ AN+L+  + + K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGC 187
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KSDV+SFGI+L  ++T
Sbjct: 188 FTIKSDVWSFGILLYEIVT 206

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 30/229 (13%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
           +G G +G++YKG+         + VAIK+L+  +  GP    EF  E  I++ + HP+LV
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLV 80
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
            L+G C  P +  LV + +P+G L + +   KDN   +  Q  +    ++   +++L   
Sbjct: 81  RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLEE- 135
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               +VH DL   N+L+ +    K++DFG++R L  +E   N          K    +M 
Sbjct: 136 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA------DGGKMPIKWMA 187
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
            E +   + T +SDV+S+G+ +  L+T  G+P  GI T+E+   L+ G+
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE 236

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE- 594
           IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G   E 
Sbjct: 20  IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
                +V EY+  GSL D L  +  S  L     ++ + ++C  + +L     ++ VH D
Sbjct: 78  KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG---NNFVHRD 133
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L   N+L+  + V+K+SDFG+++     E SS   T       K    +  PE L     
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDT------GKLPVKWTAPEALREAAF 182
Query: 713 TPKSDVYSFGIILLRLLT 730
           + KSDV+SFGI+L  + +
Sbjct: 183 STKSDVWSFGILLWEIYS 200

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N    N   L  +    GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN----NRERLLNKM--XGTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 103 GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 157
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 158 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN----KTGAKLPVKWMA 210
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 270
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 271 ------LYEVMLKCWHPKAEMRPSFSELVSRI 296

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE- 594
           IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G   E 
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
                +V EY+  GSL D L  +  S  L     ++ + ++C  + +L     ++ VH D
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG---NNFVHRD 314
Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L   N+L+  + V+K+SDFG+++     E SS   T       K    +  PE L   + 
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDT------GKLPVKWTAPEALREKKF 363
Query: 713 TPKSDVYSFGIILLRLLT-GR 732
           + KSDV+SFGI+L  + + GR
Sbjct: 364 STKSDVWSFGILLWEIYSFGR 384

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 30/229 (13%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
           +G G +G++YKG+         + VAIK+L+  +  GP    EF  E  I++ + HP+LV
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLV 103
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
            L+G C  P +  LV + +P+G L + +   KDN   +  Q  +    ++   +++L   
Sbjct: 104 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLEE- 158
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               +VH DL   N+L+ +    K++DFG++R L  +E   N          K    +M 
Sbjct: 159 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA------DGGKMPIKWMA 210
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
            E +   + T +SDV+S+G+ +  L+T  G+P  GI T+E+   L+ G+
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE 259

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 536 IGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLV 586
           +GEG +G +   L R+         QVA+K L P S     ++ ++EI+IL  + H N+V
Sbjct: 29  LGEGHFGKV--ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 587 TLVGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
              G C E       L+ E+LP+GSL++ L    N   ++ + +++ A ++C  + +L S
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                 VH DL   N+L+++    K+ DFG+++      I ++      + D      + 
Sbjct: 145 ---RQYVHRDLAARNVLVESEHQVKIGDFGLTK-----AIETDKEXXTVKDDRDSPVFWY 196
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT 730
            PE L   +    SDV+SFG+ L  LLT
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + FL S 
Sbjct: 99  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 154 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHN----KTGAKLPVKWMA 206
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 266
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 267 ------LYEVMLKCWHPKAEMRPSFSELVSRI 292

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG++R L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N    N   L  +    GT  Y+ 
Sbjct: 125 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN----NRERLLNKM--XGTLPYVA 175
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 231
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 536 IGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLV 586
           +GEG +G +   L R+         QVA+K L P S     ++ ++EI+IL  + H N+V
Sbjct: 17  LGEGHFGKV--ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 587 TLVGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
              G C E       L+ E+LP+GSL++ L    N   ++ + +++ A ++C  + +L S
Sbjct: 75  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                 VH DL   N+L+++    K+ DFG+++      I ++      + D      + 
Sbjct: 133 ---RQYVHRDLAARNVLVESEHQVKIGDFGLTK-----AIETDKEXXTVKDDRDSPVFWY 184
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT 730
            PE L   +    SDV+SFG+ L  LLT
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 25/205 (12%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           +G G +G +  G   L   +VA+K+L+     SL    + ++EI  L   RHP+++ L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V + P  + +V EY+  G L D + CK        + R R+  ++ S + +   C  H +
Sbjct: 79  VISTPTDFFMVMEYVSGGELFDYI-CKHGRVE-EMEAR-RLFQQILSAVDY---CHRHMV 132
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH DLKP N+LLDA+  +K++DFG+S  +S  E            D  G+  Y  PE + 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---------DSCGSPNYAAPEVI- 182
Query: 709 SGELT--PKSDVYSFGIILLRLLTG 731
           SG L   P+ D++S G+IL  LL G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++    +     + QQEI +LS+   P +    G+
Sbjct: 29  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS K    
Sbjct: 89  YLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL  +   KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--------GTPFWMAPEVIK 192
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEP 217

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 120
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC      
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALC------ 170
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++    +     + QQEI +LS+   P +    G+
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS K    
Sbjct: 74  YLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL  +   KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPEVIK 177
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEP 202

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 32  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 90  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 143
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC      
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLC------ 193
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +IG+G +G +YKG+  H +  VAIK++    +     + QQEI +LS+   P +    G+
Sbjct: 26  RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS +    
Sbjct: 86  YLKSTKLW-IIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSERK--- 137
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL      KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV--------GTPFWMAPEVIK 189
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEP 214

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V EY+ NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+ R L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 536 IGEGGYGSIYKGLLR----HMQVAIKMLHPH-SLQGPSEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + K  ++     M  AIK +  + S     +F  E+++L K+  HPN++ L+
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLS-------------CKDNSPPLSWQTRIRIATELC 634
           GAC       L  EY P+G+L D L                  +  LS Q  +  A ++ 
Sbjct: 93  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             + +L        +H DL   NIL+  N+V+K++DFG+SR                +T 
Sbjct: 153 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTM 200
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T  SDV+S+G++L  +  L G P  G+T
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 6   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 64  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 117
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC    
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLC---- 169
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 170 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 206

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++    +     + QQEI +LS+   P +    G+
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS K    
Sbjct: 74  YLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL  +   KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--------GTPFWMAPEVIK 177
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEP 202

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 536 IGEGGYGSIYKGLLR----HMQVAIKMLHPH-SLQGPSEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + K  ++     M  AIK +  + S     +F  E+++L K+  HPN++ L+
Sbjct: 23  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLS-------------CKDNSPPLSWQTRIRIATELC 634
           GAC       L  EY P+G+L D L                  +  LS Q  +  A ++ 
Sbjct: 83  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             + +L        +H DL   NIL+  N+V+K++DFG+SR                +T 
Sbjct: 143 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTM 190
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T  SDV+S+G++L  +  L G P  G+T
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N    N   L  +    GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN----NRERLLNKM--XGTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           +G G +G +  G   L   +VA+K+L+     SL    + ++EI  L   RHP+++ L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V + P  + +V EY+  G L D + CK        + R R+  ++ S + +   C  H +
Sbjct: 79  VISTPTDFFMVMEYVSGGELFDYI-CKHGRVE-EMEAR-RLFQQILSAVDY---CHRHMV 132
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH DLKP N+LLDA+  +K++DFG+S  +S  E      T C      G+  Y  PE + 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSC------GSPNYAAPEVI- 182
Query: 709 SGELT--PKSDVYSFGIILLRLLTG 731
           SG L   P+ D++S G+IL  LL G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 7   ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 118
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS  TTL       
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLS------ 168
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N    N   L  +    GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN----NRERLLNKM--XGTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++    +     + QQEI +LS+   P +    G+
Sbjct: 34  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                ++W ++ EYL  GS  D L       PL       I  E+   L +LHS K    
Sbjct: 94  YLKDTKLW-IIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H D+K AN+LL  +   KL+DFG++  L+  +I  N           GT  +M PE + 
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPEVIK 197
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
                 K+D++S GI  + L  G P
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEP 222

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 97  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 152 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHN----KTGAKLPVKWMA 204
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 264
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 265 ------LYEVMLKCWHPKAEMRPSFSELVSRI 290

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 21  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 81  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 141 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX--------RKGGKG 189
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 248
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + + K RP  
Sbjct: 249 --------DQPDNCPERVTDLMRMCWQFNPKMRPTF 276

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 47/263 (17%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK----GLLRH---MQVAIKMLHPH-SLQGPSEFQQEID 575
           E   +N +    IGEG +G +++    GLL +     VA+KML    S    ++FQ+E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 576 ILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED-----------RLSCKDNS---- 618
           ++++  +PN+V L+G C   +   L++EY+  G L +            LS  D S    
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 619 ------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 672
                 PPLS   ++ IA ++ + + +L   K    VH DL   N L+  N V K++DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFG 219
Query: 673 ISRFLSQNEI--SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           +SR +   +   +  N  +  R        +M PE +     T +SDV+++G++L  + +
Sbjct: 220 LSRNIYSADYYKADGNDAIPIR--------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Query: 731 G--RPALGIT-KEVQYALDTGKL 750
              +P  G+  +EV Y +  G +
Sbjct: 272 YGLQPYYGMAHEEVIYYVRDGNI 294

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX--------RKGGKG 192
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + + K RP  
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPTF 279

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 65  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 118
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLC---- 170
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 96  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 150
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 151 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 203
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 263
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 264 ------LYEVMLKCWHPKAEMRPSFSELVSRI 289

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 97  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 152 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 204
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 264
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 265 ------LYEVMLKCWHPKAEMRPSFSELVSRI 290

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 98  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 205
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 265
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + +        T   R   KG
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--------TAYYRKGGKG 192
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + + K RP  
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPTF 279

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N    N   L  +    GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN----NRERLLNKM--XGTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 98  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 153 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 205
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 265
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 95  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 149
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 150 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 202
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 262
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 263 ------LYEVMLKCWHPKAEMRPSFSELVSRI 288

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 525 GATHNFDPS----LK-IGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILS 578
           G +   DP     LK +G G +G +  G  R    VAIKM+   S+    EF +E  ++ 
Sbjct: 1   GGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMM 59
Query: 579 KIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            + H  LV L G C +     ++ EY+ NG L + L  ++       Q  + +  ++C  
Sbjct: 60  NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEA 117
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI-SSNNTTLCCRTDP 695
           + +L S      +H DL   N L++   V K+SDFG+SR++  +E  SS  +    R  P
Sbjct: 118 MEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
                   PE L   + + KSD+++FG+++  + +
Sbjct: 175 --------PEVLMYSKFSSKSDIWAFGVLMWEIYS 201

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 93  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 147
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 148 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 200
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 260
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 261 ------LYEVMLKCWHPKAEMRPSFSELVSRI 286

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 23  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 83  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 143 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------RKGGKG 191
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 250
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + + K RP  
Sbjct: 251 --------DQPDNCPERVTDLMRMCWQFNPKMRPTF 278

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 117 GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 171
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 172 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 224
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 284
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 285 ------LYEVMLKCWHPKAEMRPSFSELVSRI 310

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDI 576
           + A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 577 LSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            S +RHPN++ L G   +     L+ EY P G++   L        LS     R AT + 
Sbjct: 62  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYIT 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +   L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLC---- 167
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQGPSEFQQEIDILSKI 580
           HN     ++GEG +G ++     ++        VA+K L   S     +F +E ++L+ +
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 581 RHPNLVTLVGACPEV--WTLVYEYLPNGSLE--------DRLSCKDNSPP--LSWQTRIR 628
           +H ++V   G C E     +V+EY+ +G L         D +   + +PP  L+    + 
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS--SNN 686
           IA ++ + +++L S      VH DL   N L+  N + K+ DFG+SR +   +      +
Sbjct: 133 IAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           T L  R        +M PE +   + T +SDV+S G++L  + T
Sbjct: 190 TMLPIR--------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 90  GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 144
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 145 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 197
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 257
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 258 ------LYEVMLKCWHPKAEMRPSFSELVSRI 283

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 24  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V E + NGSL+  L   D        T I++   L  +   +       
Sbjct: 84  GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 138
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 193
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 245
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKF 268

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 30/253 (11%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG-----PSEFQQEIDIL 577
            +G    +    K+GEG YG +YK   +  Q  I  L    L       PS   +EI +L
Sbjct: 16  FQGLMEKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
            ++ HPN+V+L+         TLV+E++     +D     D +      ++I+I   L  
Sbjct: 74  KELHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIY--LYQ 127
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +L  +  C  H I+H DLKP N+L++++   KL+DFG++R       S  +  +      
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV------ 181
Query: 696 KGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNL 753
             T  Y  P+ L  S + +   D++S G I   ++TG+P   G+T + Q      K+ ++
Sbjct: 182 --TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP----KIFSI 235
Query: 754 L-DPLAGDWPFVQ 765
           L  P   +WP VQ
Sbjct: 236 LGTPNPREWPQVQ 248

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------RKGGKG 192
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + + K RP  
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPTF 279

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++ G   +  +VA+K L P ++   + F +E +++  ++H  LV L     
Sbjct: 19  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 77
Query: 594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
             E   ++ E++  GSL D L   +    L     I  + ++   + ++      + +H 
Sbjct: 78  KEEPIYIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIER---KNYIHR 133
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ AN+L+  + + K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGC 186
Query: 712 LTPKSDVYSFGIILLRLLT 730
            T KS+V+SFGI+L  ++T
Sbjct: 187 FTIKSNVWSFGILLYEIVT 205

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 90  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 652 DLKPANILLDANFVSKLSDFGISRF-LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR+ L   E SS  +    R  P        PE L   
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP--------PEVLMYS 196
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 30/253 (11%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG-----PSEFQQEIDIL 577
            +G    +    K+GEG YG +YK   +  Q  I  L    L       PS   +EI +L
Sbjct: 16  FQGLMEKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
            ++ HPN+V+L+         TLV+E++     +D     D +      ++I+I   L  
Sbjct: 74  KELHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIY--LYQ 127
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +L  +  C  H I+H DLKP N+L++++   KL+DFG++R       S  +  +      
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV------ 181
Query: 696 KGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNL 753
             T  Y  P+ L  S + +   D++S G I   ++TG+P   G+T + Q      K+ ++
Sbjct: 182 --TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP----KIFSI 235
Query: 754 L-DPLAGDWPFVQ 765
           L  P   +WP VQ
Sbjct: 236 LGTPNPREWPQVQ 248

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +Y G L     + +  A+K L+  +  G  S+F  E  I+    HPN+++L+
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           G C      P V   V  Y+ +G L + +  + ++P +  +  I    ++   + +L S 
Sbjct: 116 GICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 170
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K    VH DL   N +LD  F  K++DFG++R +   E  S +     +T  K    +M 
Sbjct: 171 K---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN----KTGAKLPVKWMA 223
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            E L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 283
Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
                 L  + ++C     + RP   + V R+
Sbjct: 284 ------LYEVMLKCWHPKAEMRPSFSELVSRI 309

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILS 578
           + A  +F+    +G+G +G++Y    ++ +  +A+K+L    L+      + ++E++I S
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLE---DRLSCKDNSPPLSWQTRIRIATEL 633
            +RHPN++ L G   +     L+ EY P G++     +LS  D       Q      TEL
Sbjct: 64  HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE------QRTATYITEL 117
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
            + L + HS K   ++H D+KP N+LL +    K++DFG     S +  SS    LC   
Sbjct: 118 ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALC--- 167
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
              GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 168 ---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 31/264 (11%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG G +G +  G L     R + VAIK L   ++ +   +F  E  I+ +  HPN+V L 
Sbjct: 51  IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 590 GACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G     +   +V E++ NG+L+  L   D        T I++   L  +   +       
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-----FTVIQLVGMLRGIAAGMRYLADMG 165
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR +  +  +   T     T  K    +  PE +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT-----TGGKIPVRWTAPEAI 220
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG-KLKNLLDPLAGDWPF 763
              + T  SDV+S+GI++  +++   RP   ++ ++V  A++ G +L   +D  AG    
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAG---- 276
Query: 764 VQAEQLANLAMRCCEMSRKSRPEL 787
                L  L + C +  R  RP+ 
Sbjct: 277 -----LHQLMLDCWQKERAERPKF 295

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V E + NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +G G +G +  G L+      + VAIK L   ++ +   +F  E  I+ +  HPN++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   +     +V E + NGSL+  L   D        T I++   L  +   +       
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   NIL+++N V K+SDFG+SR L  +  ++  T        K    +  PE +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPEAI 222
Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
           A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G     L P     P  
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L + C +  R +RP+ 
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKF 297

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 38/255 (14%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG-PSEFQQEIDILSKIR 581
           AT  ++P  +IG G YG++YK    H    VA+K +  P+  +G P    +E+ +L ++ 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 582 ---HPNLVTLVGACPEV-------WTLVYEYLPNGSLEDRLSCKDNSPP--LSWQTRIRI 629
              HPN+V L+  C           TLV+E++     +D  +  D +PP  L  +T   +
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSNNTT 688
             +    L FLH+   + IVH DLKP NIL+ +    KL+DFG++R  S Q  ++    T
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVT 174
Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
           L  R           PE L         D++S G I   +   +P      E   A   G
Sbjct: 175 LWYRA----------PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLG 221
Query: 749 KLKNLLD-PLAGDWP 762
           K+ +L+  P   DWP
Sbjct: 222 KIFDLIGLPPEDDWP 236

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 536 IGEGGYGSIYKGLLR----HMQVAIKMLHPH-SLQGPSEFQQEIDILSKI-RHPNLVTLV 589
           IGEG +G + K  ++     M  AIK +  + S     +F  E+++L K+  HPN++ L+
Sbjct: 30  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLS-------------CKDNSPPLSWQTRIRIATELC 634
           GAC       L  EY P+G+L D L                  +  LS Q  +  A ++ 
Sbjct: 90  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
             + +L        +H +L   NIL+  N+V+K++DFG+SR                +T 
Sbjct: 150 RGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR---------GQEVYVKKTM 197
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 738
            +    +M  E L     T  SDV+S+G++L  +  L G P  G+T
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G++   L        LS     R AT +  +
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITEL 120
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS    LC      
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLC------ 170
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
           GT  Y+ PE +       K D++S G++    L G+P  
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 34/219 (15%)
Query: 535 KIGEGGYGSIY----KGLL---RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++      LL     M VA+K L   S     +FQ+E ++L+ ++H ++V 
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 588 LVGACPEVWTL--VYEYLPNGSLEDRL-----------SCKDNSP-PLSWQTRIRIATEL 633
             G C E   L  V+EY+ +G L   L             +D +P PL     + +A+++
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS--SNNTTLCC 691
            + +++L        VH DL   N L+    V K+ DFG+SR +   +       T L  
Sbjct: 139 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           R        +M PE +   + T +SDV+SFG++L  + T
Sbjct: 196 R--------WMPPESILYRKFTTESDVWSFGVVLWEIFT 226

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 15  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 74  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 128
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR++  +E +S+  +    R  P        PE L   
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLMYS 180
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYS 200

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 70  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 124
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR++  +E +S+  +    R  P        PE L   
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLMYS 176
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 120/273 (43%), Gaps = 25/273 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG  G +   + R  +  VA+K++    ++  P   ++EI I   + H N+
Sbjct: 7   DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G   E  +  L  EY   G L DR+      P    Q   R   +L + +++LH  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGI 123
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 124 ---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 174
Query: 704 PEFLASGELTPKS-DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E   +  DV+S GI+L  +L G  P    +   Q   D  + K  L+P    W
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 230
Query: 762 PFVQAEQLANLAMRCCE--MSRKSRPELGKDVW 792
             + +  LA L     E   +R + P++ KD W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 34/219 (15%)
Query: 535 KIGEGGYGSIY----KGLL---RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++      LL     M VA+K L   S     +FQ+E ++L+ ++H ++V 
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 588 LVGACPEVWTL--VYEYLPNGSLEDRL-----------SCKDNSP-PLSWQTRIRIATEL 633
             G C E   L  V+EY+ +G L   L             +D +P PL     + +A+++
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS--SNNTTLCC 691
            + +++L        VH DL   N L+    V K+ DFG+SR +   +       T L  
Sbjct: 145 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           R        +M PE +   + T +SDV+SFG++L  + T
Sbjct: 202 R--------WMPPESILYRKFTTESDVWSFGVVLWEIFT 232

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 36/254 (14%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG-PSEFQQEIDILSKIR 581
           AT  ++P  +IG G YG++YK    H    VA+K +  P+  +G P    +E+ +L ++ 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 582 ---HPNLVTLVGACPEV-------WTLVYEYLPNGSLEDRLSCKDNSPP--LSWQTRIRI 629
              HPN+V L+  C           TLV+E++     +D  +  D +PP  L  +T   +
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
             +    L FLH+   + IVH DLKP NIL+ +    KL+DFG++R  S  +++ +   +
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALDPVVV 173
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 749
                   T  Y  PE L         D++S G I   +   +P      E   A   GK
Sbjct: 174 --------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLGK 222
Query: 750 LKNLLD-PLAGDWP 762
           + +L+  P   DWP
Sbjct: 223 IFDLIGLPPEDDWP 236

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 151/335 (45%), Gaps = 48/335 (14%)
Query: 512 PQFFSD---FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH- 560
           P++FS    +   E E A      S ++G+G +G +Y+G+ + +       +VAIK ++ 
Sbjct: 6   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 561 PHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSC---- 614
             S++   EF  E  ++ +    ++V L+G   +     ++ E +  G L+  L      
Sbjct: 66  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 615 KDNSP---PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
            +N+P   P S    I++A E+   + +L++ K    VH DL   N ++  +F  K+ DF
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL- 728
           G++R + + +          R   KG     +M PE L  G  T  SDV+SFG++L  + 
Sbjct: 183 GMTRDIYETDY--------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 729 -LTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            L  +P  G++ E  +++ ++ G L         D P    + L  L   C + + K RP
Sbjct: 235 TLAEQPYQGLSNEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRP 285
Query: 786 ELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPP 820
              + +  + E M       + Y   SEE   P P
Sbjct: 286 SFLEIISSIKEEMEPGFREVSFYY--SEENKLPEP 318

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 29/208 (13%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 87  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 134
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG   F +Q  I+   +    R++  GT  +M PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQ--ITPEQSK---RSEMVGTPYWMAPE 186
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 22  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 81  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 135
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR++  +E +S+  +    R  P        PE L   
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLMYS 187
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYS 207

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 16  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 75  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 129
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR++  +E +S+  +    R  P        PE L   
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLMYS 181
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVG 590
           +G G YG +YKG  RH++     AIK++     +   E +QEI++L K   H N+ T  G
Sbjct: 32  VGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYG 88
Query: 591 AC---------PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFL 640
           A           ++W LV E+   GS+ D + + K N+    W   I    E+   L  L
Sbjct: 89  AFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI--CREILRGLSHL 145
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H    H ++H D+K  N+LL  N   KL DFG+S  L +  +   NT +       GT  
Sbjct: 146 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFI-------GTPY 194
Query: 701 YMDPEFLASGE-----LTPKSDVYSFGIILLRLLTGRPAL 735
           +M PE +A  E        KSD++S GI  + +  G P L
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX--------RKGGKG 192
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + +   RP  
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPNMRPTF 279

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L    ++  +     ++  +++C  + +L + +
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 189
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 594 EV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +     ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H 
Sbjct: 90  KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 144
Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLASG 710
           DL   N L++   V K+SDFG+SR++  +E +S+  +    R  P        PE L   
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP--------PEVLMYS 196
Query: 711 ELTPKSDVYSFGIILLRLLT 730
           + + KSD+++FG+++  + +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 87  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 134
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG    ++  +  S  +T+       GT  +M PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMV------GTPYWMAPE 186
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILS 578
           A  +F+    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++E++I S
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 579 KIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
            +RHPN++ L G   +     L+ EY P G +   L        LS     R AT +  +
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ------KLSKFDEQRTATYITEL 122
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
              L  C    ++H D+KP N+LL +    K++DFG     S +  SS    L       
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXL------X 172
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE +       K D++S G++    L G+P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-----EFFKVKEPGESPIFWYAP 186
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 23  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 83  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 192
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 22  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 82  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 191
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 24  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 84  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 193
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 189
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 29/208 (13%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 88  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 135
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG   F +Q  I+   +    R+   GT  +M PE
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQ--ITPEQSK---RSXMVGTPYWMAPE 187
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 215

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 186
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 16  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 76  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 185
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 29/208 (13%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 87  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 134
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H D+K  NILL  +   KL+DFG   F +Q  I+   +    R+   GT  +M PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQ--ITPEQSK---RSXMVGTPYWMAPE 186
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 186
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 217
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 536 IGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGA 591
           +G+G +G + K    +   + A+K+++  S +    S   +E+++L K+ HPN++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 592 CPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             +   + +V E    G L D +  +      S     RI  ++ S + ++H    H+IV
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMH---KHNIV 143
Query: 650 HGDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP NILL++       K+ DFG+S    QN             D  GT  Y+ PE 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---------TKMKDRIGTAYYIAPEV 194
Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPAL------GITKEVQ---YALDTGKLKNLLD 755
           L  G    K DV+S G+IL  LL+G P         I K V+   YA D  + + + D
Sbjct: 195 L-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 15  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 75  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 184
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 38/255 (14%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG-PSEFQQEIDILSKIR 581
           AT  ++P  +IG G YG++YK    H    VA+K +  P+  +G P    +E+ +L ++ 
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 582 ---HPNLVTLVGACPEV-------WTLVYEYLPNGSLEDRLSCKDNSPP--LSWQTRIRI 629
              HPN+V L+  C           TLV+E++     +D  +  D +PP  L  +T   +
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDL 117
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSNNTT 688
             +    L FLH+   + IVH DLKP NIL+ +    KL+DFG++R  S Q  +     T
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVT 174
Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
           L  R           PE L         D++S G I   +   +P      E   A   G
Sbjct: 175 LWYRA----------PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLG 221
Query: 749 KLKNLLD-PLAGDWP 762
           K+ +L+  P   DWP
Sbjct: 222 KIFDLIGLPPEDDWP 236

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 21  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 81  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 190
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 48/335 (14%)
Query: 512 PQFFSD---FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH- 560
           P++FS    +   E E A      S ++G+G +G +Y+G+ + +       +VAIK ++ 
Sbjct: 6   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 561 PHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLS----C 614
             S++   EF  E  ++ +    ++V L+G   +     ++ E +  G L+  L      
Sbjct: 66  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125
Query: 615 KDNSP---PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
             N+P   P S    I++A E+   + +L++ K    VH DL   N ++  +F  K+ DF
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL- 728
           G++R + + +          R   KG     +M PE L  G  T  SDV+SFG++L  + 
Sbjct: 183 GMTRDIYETDY--------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 729 -LTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            L  +P  G++ E  +++ ++ G L         D P    + L  L   C + + K RP
Sbjct: 235 TLAEQPYQGLSNEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRP 285
Query: 786 ELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPP 820
              + +  + E M       + Y   SEE   P P
Sbjct: 286 SFLEIISSIKEEMEPGFREVSFYY--SEENKLPEP 318

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT---- 587
           ++G GG+G + + + +    QVAIK      S +    +  EI I+ K+ HPN+V+    
Sbjct: 21  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 588 ---LVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
              L    P ++  L  EY   G L   L+  +N   L       + +++ S L +LH  
Sbjct: 81  PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 139
Query: 644 KPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             + I+H DLKP NI+L       + K+ D G ++ L Q E       LC  T+  GT  
Sbjct: 140 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------LC--TEFVGTLQ 188
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQY 743
           Y+ PE L   + T   D +SFG +    +TG RP L   + VQ+
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 232

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT---- 587
           ++G GG+G + + + +    QVAIK      S +    +  EI I+ K+ HPN+V+    
Sbjct: 22  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 588 ---LVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
              L    P ++  L  EY   G L   L+  +N   L       + +++ S L +LH  
Sbjct: 82  PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 140
Query: 644 KPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             + I+H DLKP NI+L       + K+ D G ++ L Q E       LC  T+  GT  
Sbjct: 141 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------LC--TEFVGTLQ 189
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQY 743
           Y+ PE L   + T   D +SFG +    +TG RP L   + VQ+
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 233

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 46/302 (15%)
Query: 512 PQFFSD---FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH- 560
           P++FS    +   E E A      S ++G+G +G +Y+G+ + +       +VAIK ++ 
Sbjct: 28  PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 87
Query: 561 PHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC---- 614
             S++   EF  E  ++ +    ++V L+G   +     ++ E +  G L+  L      
Sbjct: 88  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 615 KDNSP---PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
            +N+P   P S    I++A E+   + +L++ K    VH DL   N ++  +F  K+ DF
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 204
Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL- 728
           G++R + + +          R   KG     +M PE L  G  T  SDV+SFG++L  + 
Sbjct: 205 GMTRDIYETDY--------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 729 -LTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            L  +P  G++ E  +++ ++ G L         D P    + L  L   C + + K RP
Sbjct: 257 TLAEQPYQGLSNEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRP 307
Query: 786 EL 787
Sbjct: 308 SF 309

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 204
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 48/319 (15%)
Query: 504 EASSSSHMPQFFSDFSFSEI----EGATHNFDPSLKIGEGGYGSIYK----GLLR---HM 552
           + + SS    F+ DF   E     E    N +    +G G +G +      G+ +    +
Sbjct: 17  QVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI 76
Query: 553 QVAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEVW--TLVYEYLPNGSL 608
           QVA+KML   +     E    E+ +++++  H N+V L+GAC       L++EY   G L
Sbjct: 77  QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 609 --------------------EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                               + RL  +++   L+++  +  A ++   + FL      S 
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSC 193
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH DL   N+L+    V K+ DFG++R    + +S +N  +  R + +    +M PE L 
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLAR----DIMSDSNYVV--RGNARLPVKWMAPESLF 247
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            G  T KSDV+S+GI+L  + +    LG+       +D    K + +    D PF   E+
Sbjct: 248 EGIYTIKSDVWSYGILLWEIFS----LGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEE 303
Query: 769 LANLAMRCCEMSRKSRPEL 787
           +  +   C     + RP  
Sbjct: 304 IYIIMQSCWAFDSRKRPSF 322

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 204
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVG 590
           +G+G +  +Y+    H  ++VAIKM+   ++         Q E+ I  +++HP+++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +     LV E   NG +   L  K+   P S         ++ + +++LHS   H I
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLHS---HGI 133
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL  +N+LL  N   K++DFG++  L        + TLC      GT  Y+ PE   
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH--EKHYTLC------GTPNYISPEIAT 185
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 758
                 +SDV+S G +   LL GRP            DT  +KN L+ + 
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRP----------PFDTDTVKNTLNKVV 225

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 13  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 73  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX- 188
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 189 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 242 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 4   EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 64  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX- 179
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 180 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 233 QVLRFVMEGGLL---------DKPDNCPDMLLELMRMCWQYNPKMRPSF 272

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 34/237 (14%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVG 590
           K+G G YG +   +  + H++ AIK++   S+     S+  +E+ +L  + HPN++ L  
Sbjct: 44  KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 591 ACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +     +     I+   ++ S + +LH    H+I
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYLH---KHNI 157
Query: 649 VHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP N+LL++   + + K+ DFG+S       +  N   +  R    GT  Y+ PE
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLS------AVFENQKKMKERL---GTAYYIAPE 208
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALG------ITKEVQ---YALDTGKLKNL 753
            L   +   K DV+S G+IL  LL G P  G      I ++V+   Y  D+ + KN+
Sbjct: 209 VLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLV 586
           FD   K+GEG YGS+YK + +     VAIK +   S LQ   E  +EI I+ +   P++V
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVV 87
Query: 587 TLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
              G+     ++W +V EY   GS+ D +  ++ +      T   IAT L S L  L   
Sbjct: 88  KYYGSYFKNTDLW-IVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLEYL 141
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                +H D+K  NILL+    +KL+DFG++  L+ + ++  N  +       GT  +M 
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVI-------GTPFWMA 193
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE +        +D++S GI  + +  G+P
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKP 223

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
           +++G G +GS+ +G+ R     + VAIK+L   + +  +E   +E  I+ ++ +P +V L
Sbjct: 16  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E   LV E    G L   L  K    P+S      +A  L  V + +   +  +
Sbjct: 76  IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKYLEEKN 130
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L      ++++    R+  K    +  PE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKAL-----GADDSYYTARSAGKWPLKWYAPECI 185
Query: 708 ASGELTPKSDVYSFGIILLRLLT 730
              + + +SDV+S+G+ +   L+
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSE 569
           F   E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   E
Sbjct: 6   FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 570 FQQEIDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---P 620
           F  E  ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P
Sbjct: 66  FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 621 LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 680
            S    I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + 
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 681 EISSNNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALG 736
           +          R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G
Sbjct: 183 DYY--------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 234
Query: 737 ITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
           ++ E  +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 235 LSNEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 278

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 107/250 (42%), Gaps = 45/250 (18%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSL-------------QGPSEFQQEIDILSK 579
           K+G G YG +   K    H + AIK++                  +   E   EI +L  
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 580 IRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HPN++ L     +   + LV E+   G L +++    N           I  ++ S +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII---NRHKFDECDAANIMKQILSGI 159
Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +LH    H+IVH D+KP NILL+        K+ DFG+S F S++             D
Sbjct: 160 CYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---------YKLRD 207
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG------ITKEVQ---YAL 745
             GT  Y+ PE L   +   K DV+S G+I+  LL G P  G      I K+V+   Y  
Sbjct: 208 RLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266
Query: 746 DTGKLKNLLD 755
           D    KN+ D
Sbjct: 267 DFNDWKNISD 276

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 13  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 73  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY- 188
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 189 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 242 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 12  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 72  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY- 187
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 188 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 241 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 12  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 72  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY- 187
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 188 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 241 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 554 VAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACPEVWT----LVYEYLPNG 606
           VA+K L   +  GP   S ++QEIDIL  + H +++   G C +       LV EY+P G
Sbjct: 63  VAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
           SL D L        +     +  A ++C  + +LH+      +H DL   N+LLD + + 
Sbjct: 121 SLRDYLP----RHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLV 173
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG+++      +   +     R D      +  PE L   +    SDV+SFG+ L 
Sbjct: 174 KIGDFGLAK-----AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 727 RLLT 730
            LLT
Sbjct: 229 ELLT 232

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V      
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           LVG   E+W +V EYL  GSL D ++  C D     +      +  E    L FLHS   
Sbjct: 88  LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 135
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H ++K  NILL  +   KL+DFG    ++  +  S  +T+       GT  +M PE
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMV------GTPYWMAPE 187
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +      PK D++S GI+ + ++ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEP 215

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 6   EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 66  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY- 181
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 182 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 235 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 274

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 48/275 (17%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKM-----LHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           IG+G +  +   L RH+    +VAIK+     L+P SLQ   +  +E+ I+  + HPN+V
Sbjct: 20  IGKGNFAKV--KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIV 74
Query: 587 TL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L  V    +   L+ EY   G + D L           +++ R       ++  +  C 
Sbjct: 75  KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR------QIVSAVQYCH 128
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              IVH DLK  N+LLDA+   K++DFG S   ++  +     T C      G+  Y  P
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFC------GSPPYAAP 179
Query: 705 EFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW- 761
           E     +   P+ DV+S G+IL  L++G              D   LK L +  L G + 
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYR 229
Query: 762 -PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
            PF  +    NL  R   ++   R +  ++ KD W
Sbjct: 230 IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 264

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGA 591
           +G+G +G + K   R  Q   A+K+++  S +    S   +E+++L K+ HPN++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 592 CPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             +   + +V E    G L D +  +      S     RI  ++ S + ++H    H+IV
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 650 HGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP NILL++   +   K+ DFG+S    Q      NT +    D  GT  Y+ PE 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------NTKM---KDRIGTAYYIAPEV 194
Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPAL------GITKEVQ---YALDTGKLKNLLD 755
           L  G    K DV+S G+IL  LL+G P         I K V+   YA D  + + + D
Sbjct: 195 L-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH +L   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 144 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------RKGGKG 192
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + +   RP  
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPNMRPTF 279

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE----FQQEIDILSKIRHPNLVTLVGA 591
           +G+G +G   K  + H +    M+    ++   E    F +E+ ++  + HPN++  +G 
Sbjct: 18  LGKGCFGQAIK--VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +    + EY+  G+L   +   D+  P  W  R+  A ++ S + +LHS    +I+
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYLHSM---NII 130
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK------GTFAYMD 703
           H DL   N L+  N    ++DFG++R +   +          + D K      G   +M 
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY---ALDTG-KLKNLLDPLAG 759
           PE +       K DV+SFGI+L  ++ GR    +  +  Y    +D G  ++  LD    
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GR----VNADPDYLPRTMDFGLNVRGFLDRYC- 244
Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRPELGK-DVWRVLEPMRASCGG 804
             P         + +RCC++  + RP   K + W  LE +R    G
Sbjct: 245 --PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW--LETLRMHLAG 286

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGA 591
           +G+G +G + K   R  Q   A+K+++  S +    S   +E+++L K+ HPN++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 592 CPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             +   + +V E    G L D +  +      S     RI  ++ S + ++H    H+IV
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 650 HGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP NILL++   +   K+ DFG+S    Q      NT +    D  GT  Y+ PE 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------NTKM---KDRIGTAYYIAPEV 194
Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPAL------GITKEVQ---YALDTGKLKNLLD 755
           L  G    K DV+S G+IL  LL+G P         I K V+   YA D  + + + D
Sbjct: 195 L-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 43/276 (15%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G  R +       +VA+K ++   SL+   EF  E  ++      ++V
Sbjct: 25  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRL-----SCKDN--SPPLSWQTRIRIATELCSVL 637
            L+G     +   +V E + +G L+  L       ++N   PP + Q  I++A E+   +
Sbjct: 85  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++ K    VH +L   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 145 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------RKGGKG 193
Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLK 751
                +M PE L  G  T  SD++SFG++L  +  L  +P  G++ E  +++ +D G L 
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL- 252
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   D P    E++ +L   C + +   RP  
Sbjct: 253 --------DQPDNCPERVTDLMRMCWQFNPNMRPTF 280

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 18  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L + +
Sbjct: 78  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H +L   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDK-----EYYKVKEPGESPIFWYAP 187
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 9   EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLS----CKDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L        N+P   P S  
Sbjct: 69  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N ++  +F  K+ DFG++R + + +   
Sbjct: 129 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY- 184
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 185 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 238 QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSF 277

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +IG+G +G ++KG+    Q  VAIK++    +     + QQEI +LS+     +    G+
Sbjct: 30  RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKP 645
                ++W ++ EYL  GS  D L     + P       +IAT   E+   L +LHS K 
Sbjct: 90  YLKGSKLW-IIMEYLGGGSALDLL----RAGPFD---EFQIATMLKEILKGLDYLHSEKK 141
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H D+K AN+LL      KL+DFG++  L+  +I  N           GT  +M PE
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV--------GTPFWMAPE 190
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +       K+D++S GI  + L  G P
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEP 218

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 43/289 (14%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLH-PHSLQGPSEFQQE 573
           E E A      S ++G+G +G +Y+G+ + +       +VAIK ++   S++   EF  E
Sbjct: 6   EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 574 IDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSC----KDNSP---PLSWQ 624
             ++ +    ++V L+G   +     ++ E +  G L+  L       +N+P   P S  
Sbjct: 66  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
             I++A E+   + +L++ K    VH DL   N  +  +F  K+ DFG++R + + +   
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY- 181
Query: 685 NNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE 740
                  R   KG     +M PE L  G  T  SDV+SFG++L  +  L  +P  G++ E
Sbjct: 182 -------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 741 --VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
             +++ ++ G L         D P    + L  L   C + + K RP  
Sbjct: 235 QVLRFVMEGGLL---------DKPDNCPDMLLELMRMCWQYNPKMRPSF 274

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGACP 593
           IG G YG++YKG L    VA+K+    S      F  E +I  +  + H N+   +    
Sbjct: 21  IGRGRYGAVYKGSLDERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 594 EV-------WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            V       + LV EY PNGSL   LS   +     W +  R+A  +   L +LH+  P 
Sbjct: 78  RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 647 ------SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
                 +I H DL   N+L+  +    +SDFG+S  L+ N +              GT  
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 701 YMDPEFLASG-------ELTPKSDVYSFGIILLRLL 729
           YM PE L              + D+Y+ G+I   + 
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 19  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 79  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 135
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHYVMQEHRKVPFAWCAP 187
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 573 EIDILSKIRHPNLVT----LVGACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRI 627
           E+++L +++HPN+V     ++        +V EY   G L   ++        L  +  +
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 628 RIATELCSVLIFLH--SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
           R+ T+L   L   H  S   H+++H DLKPAN+ LD     KL DFG++R L+ +E  + 
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI--TKEVQY 743
                      GT  YM PE +       KSD++S G +L  L    P       KE+  
Sbjct: 175 EFV--------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +  GK + +        P+  +++L  +  R   +    RP
Sbjct: 227 KIREGKFRRI--------PYRYSDELNEIITRMLNLKDYHRP 260

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 34/264 (12%)
Query: 525 GATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSK 579
           G +  +    K+G G YG +   K  L   + AIK++   S+   S       E+ +L +
Sbjct: 1   GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 580 IRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HPN++ L     +   + LV E    G L D +  +     +       I  ++ S  
Sbjct: 61  LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGT 117
Query: 638 IFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +LH    H+IVH DLKP N+LL++   + + K+ DFG+S   +  E+           +
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGK------MKE 165
Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG--ITKEVQYALDTGKLKN 752
             GT  Y+ PE L   +   K DV+S G+IL  LL G P  G    +E+   ++ GK   
Sbjct: 166 RLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS- 223
Query: 753 LLDPLAGDWPFV--QAEQLANLAM 774
             DP   DW  V  +A+QL  L +
Sbjct: 224 -FDP--PDWTQVSDEAKQLVKLML 244

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 41/258 (15%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG----PSEFQQEIDILS 578
           AT  ++P  +IG G YG++YK    H    VA+K +  P+   G    P    +E+ +L 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 579 KIR---HPNLVTLVGACPEV-------WTLVYEYLPNGSLEDRLSCKDNSPP--LSWQTR 626
           ++    HPN+V L+  C           TLV+E++     +D  +  D +PP  L  +T 
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETI 122
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSN 685
             +  +    L FLH+   + IVH DLKP NIL+ +    KL+DFG++R  S Q  ++  
Sbjct: 123 KDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV 179
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
             TL  R           PE L         D++S G I   +   +P      E   A 
Sbjct: 180 VVTLWYRA----------PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---AD 226
Query: 746 DTGKLKNLLD-PLAGDWP 762
             GK+ +L+  P   DWP
Sbjct: 227 QLGKIFDLIGLPPEDDWP 244

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+       +Q      VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 589 VGACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ E+LP GSL + L  + +   +     ++  +++C  + +L + +
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK-----VKEPGESPIFWYAP 189
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 519 SFSEIEGATHNFDPS------LKIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEF 570
           S  + E  T + +P        ++G+G +G +YK   +   V  A K++   S +   ++
Sbjct: 22  SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 571 QQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI 627
             EIDIL+   HPN+V L+ A      +W L+ E+   G++ D +  +   P    Q ++
Sbjct: 82  MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-DAVMLELERPLTESQIQV 139
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
            +  +    L +LH  K   I+H DLK  NIL   +   KL+DFG+S        + N  
Sbjct: 140 -VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTR 187
Query: 688 TLCCRTDPKGTFAYMDPEFLA--SGELTP---KSDVYSFGIILLRLLTGRP 733
           T+  R    GT  +M PE +   + +  P   K+DV+S GI L+ +    P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA+K++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 15  IGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L          W        +   ++  +  C    
Sbjct: 73  EVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMDPE 705
           IVH DLK  N+LLDA+   K++DFG S     NE +  N   T C      G+  Y  PE
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFC------GSPPYAAPE 175
Query: 706 FLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW-- 761
                +   P+ DV+S G+IL  L++G              D   LK L +  L G +  
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRI 225
Query: 762 PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           PF  +    NL  +   ++   R +  ++ KD W
Sbjct: 226 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 259

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        M VAIK     +     E F QE   + +  HP++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S +   
Sbjct: 458 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESKR--- 511
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-------DSTYYKASKGKLPIKWMAPESI 564
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 85  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 141
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHYVMQEHRKVPFAWCAP 193
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 85  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 141
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHXVMQEHRKVPFAWCAP 193
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDIL 577
            +G +  +    K+G G YG +   K  L   + AIK++   S+   S       E+ +L
Sbjct: 16  FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 578 SKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
            ++ HPN++ L     +   + LV E    G L D +  +     +       I  ++ S
Sbjct: 76  KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLS 132
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCR 692
              +LH    H+IVH DLKP N+LL++   + + K+ DFG+S   +  E+          
Sbjct: 133 GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGK------M 180
Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG--ITKEVQYALDTGKL 750
            +  GT  Y+ PE L   +   K DV+S G+IL  LL G P  G    +E+   ++ GK 
Sbjct: 181 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKF 239
Query: 751 KNLLDPLAGDWPFV--QAEQLANLAM 774
               DP   DW  V  +A+QL  L +
Sbjct: 240 S--FDP--PDWTQVSDEAKQLVKLML 261

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 19  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 79  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 135
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHYVMQEHRKVPFAWCAP 187
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +GEG +G +Y+G+  +     + VA+K      +L    +F  E  I+  + HP++V L+
Sbjct: 16  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E   W ++ E  P G L   L    NS  L   T +  + ++C  + +L S    +
Sbjct: 76  GIIEEEPTW-IIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESI---N 129
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   NIL+ +    KL DFG+SR++   +    + T       +    +M PE +
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-------RLPIKWMSPESI 182
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGKLKNLLDPLAGDWPFV 764
                T  SDV+ F + +  +L+   +P   +  K+V   L+ G      D L    P +
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG------DRLPK--PDL 234
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L  RC +     RP  
Sbjct: 235 CPPVLYTLMTRCWDYDPSDRPRF 257

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKM-----LHPHSLQGPSEFQQEIDILSK 579
           N+     IG+G +  +   L RH+    +VA+K+     L+P SLQ   +  +E+ I+  
Sbjct: 16  NYRLQKTIGKGNFAKV--KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKI 70
Query: 580 IRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HPN+V L  V    +   LV EY   G + D L           + + R       ++
Sbjct: 71  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIV 124
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
             +  C    IVH DLK  N+LLD +   K++DFG S     NE +  N   T C     
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS-----NEFTVGNKLDTFC----- 174
Query: 696 KGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTG 731
            G+  Y  PE     +   P+ DV+S G+IL  L++G
Sbjct: 175 -GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSE-FQQEIDILSK 579
           +DP   IG G    + + + R          M+V  + L P  L+   E  ++E  IL +
Sbjct: 96  YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 580 IR-HPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           +  HP+++TL+ +        LV++ +  G L D L+ K     LS +    I   L   
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEA 212
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           + FLH+   ++IVH DLKP NILLD N   +LSDFG S  L   E       LC      
Sbjct: 213 VSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELC------ 260
Query: 697 GTFAYMDPEFL--ASGELTP----KSDVYSFGIILLRLLTGRPALGITKEV 741
           GT  Y+ PE L  +  E  P    + D+++ G+IL  LL G P     +++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA+K++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMDPE 705
           IVH DLK  N+LLDA+   K++DFG S     NE +  N   T C      G+  Y  PE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFC------GSPPYAAPE 182
Query: 706 FLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW-- 761
                +   P+ DV+S G+IL  L++G              D   LK L +  L G +  
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRI 232
Query: 762 PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           PF  +    NL  +   ++   R +  ++ KD W
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 75  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 131
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHYVMQEHRKVPFAWCAP 183
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 75  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 131
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHYVMQEHRKVPFAWCAP 183
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 50/276 (18%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKM-----LHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           IG+G +  +   L RH+    +VAIK+     L+P SLQ   +  +E+ I+  + HPN+V
Sbjct: 23  IGKGNFAKV--KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIV 77
Query: 587 TL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L  V    +   L+ EY   G + D L           +++ R       ++  +  C 
Sbjct: 78  KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR------QIVSAVQYCH 131
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK-GTFAYMD 703
              IVH DLK  N+LLDA+   K++DFG           SN  T+  + D   G   Y  
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGF----------SNEFTVGGKLDAFCGAPPYAA 181
Query: 704 PEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW 761
           PE     +   P+ DV+S G+IL  L++G              D   LK L +  L G +
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKY 231
Query: 762 --PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
             PF  +    NL  R   ++   R +  ++ KD W
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +GEG +G +Y+G+  +     + VA+K      +L    +F  E  I+  + HP++V L+
Sbjct: 32  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E   W ++ E  P G L   L    NS  L   T +  + ++C  + +L S    +
Sbjct: 92  GIIEEEPTW-IIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESI---N 145
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   NIL+ +    KL DFG+SR++   +    + T       +    +M PE +
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-------RLPIKWMSPESI 198
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGKLKNLLDPLAGDWPFV 764
                T  SDV+ F + +  +L+   +P   +  K+V   L+ G      D L    P +
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG------DRLPK--PDL 250
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L  RC +     RP  
Sbjct: 251 CPPVLYTLMTRCWDYDPSDRPRF 273

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA+K++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMDPE 705
           IVH DLK  N+LLDA+   K++DFG S     NE +  N   T C      G+  Y  PE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFC------GSPPYAAPE 182
Query: 706 FLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW-- 761
                +   P+ DV+S G+IL  L++G              D   LK L +  L G +  
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRI 232
Query: 762 PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           PF  +    NL  +   ++   R +  ++ KD W
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +G+G YG +Y G  L   +++AIK +     +      +EI +   ++H N+V  +G+  
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 594 E--VWTLVYEYLPNGSLEDRLSC-----KDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           E     +  E +P GSL   L       KDN   + + T+     ++   L +LH    +
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD---N 141
Query: 647 SIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            IVH D+K  N+L++  + V K+SDFG S+ L+           C  T   GT  YM PE
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-------GINPCTETF-TGTLQYMAPE 193
Query: 706 FLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
            +  G       +D++S G  ++ + TG+P      E Q A+
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 235

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G    P +  +V E  P GSL DRL        L   T  R A ++   + +L S +
Sbjct: 75  RLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKR 131
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L Q     N+     +   K  FA+  P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-----NDDHXVMQEHRKVPFAWCAP 183
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L +   +  SD + FG+ L  + T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +GEG +G +Y+G+  +     + VA+K      +L    +F  E  I+  + HP++V L+
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E   W ++ E  P G L   L    NS  L   T +  + ++C  + +L S    +
Sbjct: 80  GIIEEEPTW-IIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESI---N 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   NIL+ +    KL DFG+SR++   +    + T       +    +M PE +
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-------RLPIKWMSPESI 186
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGKLKNLLDPLAGDWPFV 764
                T  SDV+ F + +  +L+   +P   +  K+V   L+ G      D L    P +
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG------DRLPK--PDL 238
Query: 765 QAEQLANLAMRCCEMSRKSRPEL 787
               L  L  RC +     RP  
Sbjct: 239 CPPVLYTLMTRCWDYDPSDRPRF 261

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        M VAIK     +     E F QE   + +  HP++V L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 78  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 184
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        M VAIK     +     E F QE   + +  HP++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S +   
Sbjct: 458 GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESKR--- 511
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ A    KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYME-------DSTYYKASKGKLPIKWMAPESI 564
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        M VAIK     +     E F QE   + +  HP++V L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 78  GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KR 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTXXKASKGKLPIKWMAPESI 184
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 554 VAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYEYLPNG 606
           VA+K L      GP   S ++QEIDIL  + H +++   G C +       LV EY+P G
Sbjct: 46  VAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
           SL D L        +     +  A ++C  + +LHS      +H +L   N+LLD + + 
Sbjct: 104 SLRDYLP----RHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLV 156
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG+++      +   +     R D      +  PE L   +    SDV+SFG+ L 
Sbjct: 157 KIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 727 RLLT 730
            LLT
Sbjct: 212 ELLT 215

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 25/222 (11%)
Query: 573 EIDILSKIRHPNLVT----LVGACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRI 627
           E+++L +++HPN+V     ++        +V EY   G L   ++        L  +  +
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 628 RIATELCSVLIFLH--SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
           R+ T+L   L   H  S   H+++H DLKPAN+ LD     KL DFG++R L+ +  +S 
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSF 172
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI--TKEVQY 743
             T        GT  YM PE +       KSD++S G +L  L    P       KE+  
Sbjct: 173 AKTFV------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +  GK + +        P+  +++L  +  R   +    RP
Sbjct: 227 KIREGKFRRI--------PYRYSDELNEIITRMLNLKDYHRP 260

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 535 KIGEGGYGS--IYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVG 590
           KIGEG +G   + K      Q  IK ++   +      E ++E+ +L+ ++HPN+V    
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 591 ACPEVWTL--VYEYLPNGSLEDRLSCKDN-----SPPLSWQTRIRIATELCSVLIFLHSC 643
           +  E  +L  V +Y   G L  R++ +          L W  +I      C  L  +H  
Sbjct: 91  SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI------CLALKHVHDR 144
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           K   I+H D+K  NI L  +   +L DFGI+R L        N+T+       GT  Y+ 
Sbjct: 145 K---ILHRDIKSQNIFLTKDGTVQLGDFGIARVL--------NSTVELARACIGTPYYLS 193
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL-LDPLAGDWP 762
           PE   +     KSD+++ G +L  L T          +++A + G +KNL L  ++G +P
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCT----------LKHAFEAGSMKNLVLKIISGSFP 243

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 60/301 (19%)
Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNL 585
           +GEG +G + K    H++       VA+KML  ++   PSE +    E ++L ++ HP++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHV 88
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPP---------------------LS 622
           + L GAC +     L+ EY   GSL   L       P                     L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
               I  A ++   + +L   K   +VH DL   NIL+      K+SDFG+SR + + + 
Sbjct: 149 MGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED- 204
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE 740
                +   R+  +    +M  E L     T +SDV+SFG++L  ++T  G P  GI  E
Sbjct: 205 -----SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 741 VQYALDTGKLKNLLDPLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 797
                   +L NLL    G   + P   +E++  L ++C +     RP    D+ + LE 
Sbjct: 260 --------RLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA-DISKDLEK 308
Query: 798 M 798
           M
Sbjct: 309 M 309

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 60/301 (19%)
Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNL 585
           +GEG +G + K    H++       VA+KML  ++   PSE +    E ++L ++ HP++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHV 88
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPP---------------------LS 622
           + L GAC +     L+ EY   GSL   L       P                     L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
               I  A ++   + +L   K   +VH DL   NIL+      K+SDFG+SR + + + 
Sbjct: 149 MGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED- 204
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE 740
                +   R+  +    +M  E L     T +SDV+SFG++L  ++T  G P  GI  E
Sbjct: 205 -----SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 741 VQYALDTGKLKNLLDPLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 797
                   +L NLL    G   + P   +E++  L ++C +     RP    D+ + LE 
Sbjct: 260 --------RLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA-DISKDLEK 308
Query: 798 M 798
           M
Sbjct: 309 M 309

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 536 IGEGGYGSI-----YKGLLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
           +GEG +G +     YK      +VA+K +    L+        ++EI  L  +RHP+++ 
Sbjct: 17  LGEGSFGKVKLATHYKT---QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 588 L--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L  V   P    +V EY   G L D +  K        + R      +C++      C  
Sbjct: 74  LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMT--EDEGRRFFQQIICAI----EYCHR 126
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H IVH DLKP N+LLD N   K++DFG+S  ++      N     C     G+  Y  PE
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT----DGNFLKTSC-----GSPNYAAPE 177
Query: 706 FLASGELT--PKSDVYSFGIILLRLLTGR 732
            + +G+L   P+ DV+S GI+L  +L GR
Sbjct: 178 VI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 80  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 186
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 187 NFRRFTSASDVWMFGVCMWEIL 208

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA++++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMDPE 705
           IVH DLK  N+LLDA+   K++DFG S     NE +  N   T C      G+  Y  PE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFC------GSPPYAAPE 182
Query: 706 FLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW-- 761
                +   P+ DV+S G+IL  L++G              D   LK L +  L G +  
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRI 232
Query: 762 PFVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           PF  +    NL  +   ++   R +  ++ KD W
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +G+G YG +Y G  L   +++AIK +     +      +EI +   ++H N+V  +G+  
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 594 E--VWTLVYEYLPNGSLEDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           E     +  E +P GSL   L       KDN   + + T+     ++   L +LH    +
Sbjct: 76  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD---N 127
Query: 647 SIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
            IVH D+K  N+L++  + V K+SDFG S+ L+           C  T   GT  YM PE
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-------GINPCTETF-TGTLQYMAPE 179
Query: 706 FLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
            +  G       +D++S G  ++ + TG+P      E Q A+
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 221

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 81  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 134
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 187
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 188 NFRRFTSASDVWMFGVCMWEIL 209

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 519 SFSEIEGATHNFDPS------LKIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEF 570
           S  + E  T + +P        ++G+G +G +YK   +   V  A K++   S +   ++
Sbjct: 22  SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 571 QQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI 627
             EIDIL+   HPN+V L+ A      +W L+ E+   G++ D +  +   P    Q ++
Sbjct: 82  MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-DAVMLELERPLTESQIQV 139
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
            +  +    L +LH  K   I+H DLK  NIL   +   KL+DFG         +S+ NT
Sbjct: 140 -VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG---------VSAKNT 186
Query: 688 TLCCRTDP-KGTFAYMDPEFLA--SGELTP---KSDVYSFGIILLRLLTGRP 733
               R D   GT  +M PE +   + +  P   K+DV+S GI L+ +    P
Sbjct: 187 RXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 555 AIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDR 611
           A+K +   +L+G  S  + EI +L KI+H N+V L  +   P    LV + +  G L DR
Sbjct: 51  AVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDR 110
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKL 668
           +  K         T IR   ++   + +LH      IVH DLKP N+L    D      +
Sbjct: 111 IVEKGFYTEKDASTLIR---QVLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESKIMI 164
Query: 669 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL 728
           SDFG+S+   + ++ S   T C      GT  Y+ PE LA    +   D +S G+I   L
Sbjct: 165 SDFGLSKMEGKGDVMS---TAC------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 215
Query: 729 LTGRP 733
           L G P
Sbjct: 216 LCGYP 220

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 75  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 128
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 181
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL 203

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 60/301 (19%)
Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNL 585
           +GEG +G + K    H++       VA+KML  ++   PSE +    E ++L ++ HP++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHV 88
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPP---------------------LS 622
           + L GAC +     L+ EY   GSL   L       P                     L+
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
               I  A ++   + +L      S+VH DL   NIL+      K+SDFG+SR + + + 
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED- 204
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE 740
                +   R+  +    +M  E L     T +SDV+SFG++L  ++T  G P  GI  E
Sbjct: 205 -----SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 741 VQYALDTGKLKNLLDPLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 797
                   +L NLL    G   + P   +E++  L ++C +     RP    D+ + LE 
Sbjct: 260 --------RLFNLLK--TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA-DISKDLEK 308
Query: 798 M 798
           M
Sbjct: 309 M 309

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 519 SFSEIEGATHNFDPSL------KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEF 570
           S  + E  T + +P        ++G+G +G +YK   +   V  A K++   S +   ++
Sbjct: 22  SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 571 QQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI 627
             EIDIL+   HPN+V L+ A      +W L+ E+   G++ D +  +   P    Q ++
Sbjct: 82  MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-DAVMLELERPLTESQIQV 139
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
            +  +    L +LH  K   I+H DLK  NIL   +   KL+DFG         +S+ NT
Sbjct: 140 -VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG---------VSAKNT 186
Query: 688 TLCCRTDP-KGTFAYMDPEFLA--SGELTP---KSDVYSFGIILLRLLTGRP 733
               R D   GT  +M PE +   + +  P   K+DV+S GI L+ +    P
Sbjct: 187 RXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 83  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 136
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 189
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 190 NFRRFTSASDVWMFGVCMWEIL 211

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 554 VAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYEYLPNG 606
           VA+K L      GP   S ++QEIDIL  + H +++   G C +       LV EY+P G
Sbjct: 46  VAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
           SL D L        +     +  A ++C  + +LH+      +H +L   N+LLD + + 
Sbjct: 104 SLRDYLP----RHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLV 156
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG+++      +   +     R D      +  PE L   +    SDV+SFG+ L 
Sbjct: 157 KIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 727 RLLT 730
            LLT
Sbjct: 212 ELLT 215

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
           +++G G +GS+ +G+ R     + VAIK+L   + +  +E   +E  I+ ++ +P +V L
Sbjct: 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E   LV E    G L   L  K    P+S      +A  L  V + +   +  +
Sbjct: 402 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKYLEEKN 456
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH +L   N+LL     +K+SDFG+S+ L      ++++    R+  K    +  PE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKAL-----GADDSYYTARSAGKWPLKWYAPECI 511
Query: 708 ASGELTPKSDVYSFGIILLRLLT 730
              + + +SDV+S+G+ +   L+
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        M VAIK     +     E F QE   + +  HP++V L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 78  GVITENPVW-IIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KR 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ A    KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 184
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S     
Sbjct: 78  GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KR 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 184
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L+
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G   E  VW ++ E    G L   L  +  S  L+  + I  A +L + L +L S +   
Sbjct: 106 GVITENPVW-IIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR--- 159
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++        ++T    +  K    +M PE +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------EDSTYYKASKGKLPIKWMAPESI 212
Query: 708 ASGELTPKSDVYSFGIILLRLL 729
                T  SDV+ FG+ +  +L
Sbjct: 213 NFRRFTSASDVWMFGVCMWEIL 234

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL--V 589
           K+G G Y ++YKGL +   + VA+K +   S +G PS   +EI ++ +++H N+V L  V
Sbjct: 12  KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCK--DNSP-PLSWQTRIRIATELCSVLIFLHSCKPH 646
                  TLV+E++ N  L+  +  +   N+P  L          +L   L F H  K  
Sbjct: 72  IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-- 128
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLS--QNEISSNNTTLCCRTDPKGTFAYMDP 704
            I+H DLKP N+L++     KL DFG++R      N  SS   TL  R           P
Sbjct: 129 -ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA----------P 177
Query: 705 EFLASGELTPKS-DVYSFGIILLRLLTGRPAL-GITKEVQYAL 745
           + L        S D++S G IL  ++TG+P   G   E Q  L
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 44/273 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA+K++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS-SNNTTLCCRTDPKGTFAYMDPEF 706
           IVH DLK  N+LLDA+   K++DFG S     NE +  N     C   P     Y  PE 
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDAFCGAPP-----YAAPEL 183
Query: 707 LASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW--P 762
               +   P+ DV+S G+IL  L++G              D   LK L +  L G +  P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 763 FVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           F  +    NL  +   ++   R +  ++ KD W
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 573 EIDILSKIRHPNLVT----LVGACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRI 627
           E+++L +++HPN+V     ++        +V EY   G L   ++        L  +  +
Sbjct: 55  EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 628 RIATELCSVLIFLH--SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
           R+ T+L   L   H  S   H+++H DLKPAN+ LD     KL DFG++R L+ +   + 
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI--TKEVQY 743
                      GT  YM PE +       KSD++S G +L  L    P       KE+  
Sbjct: 175 AFV--------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 744 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +  GK + +        P+  +++L  +  R   +    RP
Sbjct: 227 KIREGKFRRI--------PYRYSDELNEIITRMLNLKDYHRP 260

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 32/223 (14%)
Query: 535 KIGEGGYGSIY------KGLLRHMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVT 587
           K+G G +G ++       GL R     IK ++    Q P E  + EI++L  + HPN++ 
Sbjct: 29  KLGSGAFGDVHLVEERSSGLER----VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 588 LVGACPEVWTL--VYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           +     +   +  V E    G L +R+ S +     LS      +  ++ + L + HS  
Sbjct: 85  IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS-- 142
Query: 645 PHSIVHGDLKPANILL-DANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
              +VH DLKP NIL  D +  S  K+ DFG++     +E S+N           GT  Y
Sbjct: 143 -QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA---------GTALY 192
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGIT-KEVQ 742
           M PE     ++T K D++S G+++  LLTG  P  G + +EVQ
Sbjct: 193 MAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ 234

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIK-MLHPHSLQGPSEF-QQEIDILSKIRHPNLVTLVGA 591
           +GEG YG + K   +     VAIK  L     +   +   +EI +L ++RH NLV L+  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 592 CPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
           C +   W LV+E++ +  L+D L    N   L +Q   +   ++ + + F HS   H+I+
Sbjct: 93  CKKKKRWYLVFEFVDHTILDD-LELFPNG--LDYQVVQKYLFQIINGIGFCHS---HNII 146
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQ-NEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           H D+KP NIL+  + V KL DFG +R L+   E+           D   T  Y  PE L 
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD---------DEVATRWYRAPELLV 197
Query: 709 SGELTPKS-DVYSFGIILLRLLTGRPAL 735
                 K+ DV++ G ++  +  G P  
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEPLF 225

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG Y ++YKG   L    VA+K +   H    P    +E+ +L  ++H N+VTL  +
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +  TLV+EYL     +D     D+   +     +++   L  +L  L  C    ++
Sbjct: 69  IHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCHRQKVL 122
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
           H DLKP N+L++     KL+DFG++R  S    + +N  +        T  Y  P+  L 
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--------TLWYRPPDILLG 174
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWP 762
           S + + + D++  G I   + TGRP   G T E Q        + L  P    WP
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWP 226

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 30/228 (13%)
Query: 522 EIEGATHNFDPSL------KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQE 573
           E E    + DP+       ++G+G +G +YK   +      A K++   S +   ++  E
Sbjct: 7   EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 574 IDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
           I+IL+   HP +V L+GA     ++W ++ E+ P G++ D +  + +      Q ++ + 
Sbjct: 67  IEILATCDHPYIVKLLGAYYHDGKLWIMI-EFCPGGAV-DAIMLELDRGLTEPQIQV-VC 123
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            ++   L FLHS +   I+H DLK  N+L+      +L+DFG+S        + N  TL 
Sbjct: 124 RQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS--------AKNLKTLQ 172
Query: 691 CRTDPKGTFAYMDPEFLASGEL--TP---KSDVYSFGIILLRLLTGRP 733
            R    GT  +M PE +    +  TP   K+D++S GI L+ +    P
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++TL+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           KIGEG YG ++K   R     VAIK     S   P   +   +EI +L +++HPNLV L+
Sbjct: 10  KIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 590 GACPEVWT------LVYEYLPNGSLEDRLSCKDNSP-----PLSWQTRIRIATELCSVLI 638
               EV+       LV+EY  +  L +    +   P      ++WQT           L 
Sbjct: 69  ----EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT-----------LQ 113
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            ++ C  H+ +H D+KP NIL+  + V KL DFG +R L+      +        D   T
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--------DEVAT 165
Query: 699 FAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRP 733
             Y  PE L    +  P  DV++ G +   LL+G P
Sbjct: 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 535 KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G+G +G +YK   +      A K++   S +   ++  EI+IL+   HP +V L+GA 
Sbjct: 18  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               ++W ++ E+ P G++ D +  + +      Q ++ +  ++   L FLHS +   I+
Sbjct: 78  YHDGKLWIMI-EFCPGGAV-DAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKR---II 131
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DLK  N+L+      +L+DFG+S        + N  TL  R    GT  +M PE +  
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVS--------AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 710 GEL--TP---KSDVYSFGIILLRLLTGRP 733
             +  TP   K+D++S GI L+ +    P
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEP 212

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV- 586
            D  +KIGEG  G +     +H   QVA+KM+     Q       E+ I+   +H N+V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 587 ----TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W L+ E+L  G+L D +S          Q R+   +IAT   +VL  
Sbjct: 107 MYKSYLVGE--ELWVLM-EFLQGGALTDIVS----------QVRLNEEQIATVCEAVLQA 153
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S++        +  R    GT 
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--------VPKRKXLVGTP 205
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++      + D++S GI+++ ++ G P
Sbjct: 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 115/273 (42%), Gaps = 44/273 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA+K++    L   S  +  +E+ I   + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS-SNNTTLCCRTDPKGTFAYMDPEF 706
           IVH DLK  N+LLDA+   K++DFG S     NE +  N     C   P     Y  PE 
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS-----NEFTFGNKLDAFCGAPP-----YAAPEL 183
Query: 707 LASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW--P 762
               +   P+ DV+S G+IL  L++G              D   LK L +  L G +  P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 763 FVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           F  +    NL  +   ++   R +  ++ KD W
Sbjct: 234 FYXSTDCENLLKKFLILNPSKRGTLEQIXKDRW 266

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 44/273 (16%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL- 588
           IG+G +  +   L RH+    +VA++++    L   S  +  +E+ I+  + HPN+V L 
Sbjct: 22  IGKGNFAKV--KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   LV EY   G + D L           + + R       ++  +  C    
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR------QIVSAVQYCHQKF 133
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS-SNNTTLCCRTDPKGTFAYMDPEF 706
           IVH DLK  N+LLDA+   K++DFG S     NE +  N     C + P     Y  PE 
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDEFCGSPP-----YAAPEL 183
Query: 707 LASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDW--P 762
               +   P+ DV+S G+IL  L++G              D   LK L +  L G +  P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG----------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 763 FVQAEQLANLAMRCCEMS---RKSRPELGKDVW 792
           F  +    NL  +   ++   R +  ++ KD W
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R ++  +   N  
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT- 216
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 217 -----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDXXKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDXXKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDILS 578
           A   ++   +IGEG YG ++K   R ++     VA+K +   + +   P    +E+ +L 
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 579 KIR---HPNLVTLVGACP-------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
            +    HPN+V L   C           TLV+E++ +  L   L  K   P +  +T   
Sbjct: 67  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKD 124
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSNNT 687
           +  +L   L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R  S Q  ++S   
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 747
           TL           Y  PE L         D++S G I   +   +P    + +V      
Sbjct: 182 TLW----------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QL 228
Query: 748 GKLKNLLD-PLAGDWP 762
           GK+ +++  P   DWP
Sbjct: 229 GKILDVIGLPGEEDWP 244

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
           +F+    +G+G +G++Y    +  H  VA+K+L    ++      + ++EI+I + + HP
Sbjct: 24  DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 584 NLVTLVGACPEV--WTLVYEYLPNGSLEDRL--SCKDNSPPLSWQTRIRIATELCSVLIF 639
           N++ L     +     L+ EY P G L   L  SC  +      Q    I  EL   L++
Sbjct: 84  NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE-----QRTATIMEELADALMY 138
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
            H  K   ++H D+KP N+LL      K++DFG     S +  S    T+C      GT 
Sbjct: 139 CHGKK---VIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMC------GTL 185
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            Y+ PE +       K D++  G++   LL G P  
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQ---EIDILSKIR-HPNLVTL 588
           K+G+G YG ++K + R     VA+K +   + Q  ++ Q+   EI IL+++  H N+V L
Sbjct: 16  KLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 589 VGACP-----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +         +V+ LV++Y+     E  L     +  L    +  +  +L  V+ +LHS 
Sbjct: 75  LNVLRADNDRDVY-LVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR----------- 692
               ++H D+KP+NILL+A    K++DFG+SR        +NN  L              
Sbjct: 129 ---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 693 --TDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             TD   T  Y  PE  L S + T   D++S G IL  +L G+P  
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 529 NFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNL 585
           +F+P   +G GG+G ++  K  +     AIK +  P+      +  +E+  L+K+ HP +
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 586 VTLVGACPEVWTL---------VYEYLP-----NGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           V    A  E  T          VY Y+        +L+D ++ +           + I  
Sbjct: 66  VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--- 688
           ++   + FLHS     ++H DLKP+NI    + V K+ DFG+   + Q+E      T   
Sbjct: 126 QIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 689 -LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
                T   GT  YM PE +     + K D++S G+IL  LL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDILS 578
           A   ++   +IGEG YG ++K   R ++     VA+K +   + +   P    +E+ +L 
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 579 KIR---HPNLVTLVGACP-------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
            +    HPN+V L   C           TLV+E++ +  L   L  K   P +  +T   
Sbjct: 67  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKD 124
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSNNT 687
           +  +L   L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R  S Q  ++S   
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 747
           TL           Y  PE L         D++S G I   +   +P    + +V      
Sbjct: 182 TLW----------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QL 228
Query: 748 GKLKNLLD-PLAGDWP 762
           GK+ +++  P   DWP
Sbjct: 229 GKILDVIGLPGEEDWP 244

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQ--GPSEFQQEIDILS 578
           A   ++   +IGEG YG ++K   R ++     VA+K +   + +   P    +E+ +L 
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 579 KIR---HPNLVTLVGACP-------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
            +    HPN+V L   C           TLV+E++ +  L   L  K   P +  +T   
Sbjct: 67  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKD 124
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS-QNEISSNNT 687
           +  +L   L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R  S Q  ++S   
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 747
           TL  R           PE L         D++S G I   +   +P    + +V      
Sbjct: 182 TLWYRA----------PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QL 228
Query: 748 GKLKNLLD-PLAGDWP 762
           GK+ +++  P   DWP
Sbjct: 229 GKILDVIGLPGEEDWP 244

>pdb|1T1H|A Chain A, Nmr Solution Structure Of The U Box Domain From Atpub14, An Armadillo Repeat Containing Protein From Arabidopsis Thaliana Length = 78

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 817 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 876
           E P YF CPI  E+M+DP + + G TYE  +++ WLD+GH+T P +   L H  L PN  
Sbjct: 4   EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63
Query: 877 LRSAIQEWLQQH 888
           L+S I  W + +
Sbjct: 64  LKSLIALWCESN 75

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLVGA-- 591
           +IG+G YG ++ G  R  +VA+K+    + +  S F++ EI     +RH N++  + A  
Sbjct: 44  QIGKGRYGEVWMGKWRGEKVAVKVF--FTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 592 -CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS----- 642
                WT +Y   +Y  NGSL D L     S  L  ++ +++A    S L  LH+     
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 643 -CKPHSIVHGDLKPANILLDANFVSKLSDFGIS-RFLSQ-NEISSNNTTLCCRTDPKGTF 699
             KP +I H DLK  NIL+  N    ++D G++ +F+S  NE+     T        GT 
Sbjct: 158 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV------GTK 210
Query: 700 AYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            YM PE L         +    +D+YSFG+IL  +     + GI +E Q
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTL--VG 590
           +G G +  +     +  Q  VAIK +   +L+G     + EI +L KI+HPN+V L  + 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  L+ + +  G L DR+  K        +   R+  ++   + +LH      IVH
Sbjct: 86  ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDL---GIVH 139
Query: 651 GDLKPANIL---LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N+L   LD +    +SDFG+S+      + S   T C      GT  Y+ PE L
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---TAC------GTPGYVAPEVL 190
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
           A    +   D +S G+I   LL G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 26/224 (11%)
Query: 524 EGATHNFDPSLK---IGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILS 578
           +GA ++F    K   +G G +G ++K       +++A K++    ++   E + EI +++
Sbjct: 82  QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 579 KIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           ++ H NL+ L  A        LV EY+  G L DR+   D S  L+    I    ++C  
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII--DESYNLTELDTILFMKQICEG 199
Query: 637 LIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           +  +H      I+H DLKP NIL    DA  + K+ DFG++R     E    N       
Sbjct: 200 IRHMHQM---YILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNF------ 249
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALG 736
              GT  ++ PE +    ++  +D++S G+I   LL+G  P LG
Sbjct: 250 ---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 554 VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLED 610
           VAIK +   +L+G     + EI +L KI+HPN+V L  +        L+ + +  G L D
Sbjct: 46  VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL---LDANFVSK 667
           R+  K      + +   R+  ++   + +LH      IVH DLKP N+L   LD +    
Sbjct: 106 RIVEKGF---YTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIM 159
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           +SDFG+S+      + S   T C      GT  Y+ PE LA    +   D +S G+I   
Sbjct: 160 ISDFGLSKMEDPGSVLS---TAC------GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 728 LLTGRP 733
           LL G P
Sbjct: 211 LLCGYP 216

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L +  L+D +    ++  L+      I + L  +L 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM----DASALTGIPLPLIKSYLFQLLQ 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 169
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVT 167
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTL--VG 590
           +G G +  +     +  Q  VAIK +   +L+G     + EI +L KI+HPN+V L  + 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  L+ + +  G L DR+  K        +   R+  ++   + +LH      IVH
Sbjct: 86  ESGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVLDAVKYLHDL---GIVH 139
Query: 651 GDLKPANIL---LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N+L   LD +    +SDFG+S+      + S   T C      GT  Y+ PE L
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---TAC------GTPGYVAPEVL 190
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
           A    +   D +S G+I   LL G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSL-----QGPSEFQQEIDILSK 579
           N+     +GEG +G +   L  H     +VA+K+++   L     QG    ++EI  L  
Sbjct: 15  NYQIVKTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 70
Query: 580 IRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           +RHP+++ L  V    +   +V EY  N  L D +  +D    +S Q   R   ++ S +
Sbjct: 71  LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAV 126
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +   C  H IVH DLKP N+LLD +   K++DFG+S  ++      N     C     G
Sbjct: 127 EY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSC-----G 174
Query: 698 TFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGR 732
           +  Y  PE + SG+L   P+ DV+S G+IL  +L  R
Sbjct: 175 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 210

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L +  L+D +    ++  L+      I + L  +L 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM----DASALTGIPLPLIKSYLFQLLQ 116
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 168
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSL-----QGPSEFQQEIDILSK 579
           N+     +GEG +G +   L  H     +VA+K+++   L     QG    ++EI  L  
Sbjct: 14  NYQIVKTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 69
Query: 580 IRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           +RHP+++ L  V    +   +V EY  N  L D +  +D    +S Q   R   ++ S +
Sbjct: 70  LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAV 125
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +   C  H IVH DLKP N+LLD +   K++DFG+S  ++      N     C     G
Sbjct: 126 EY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSC-----G 173
Query: 698 TFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGR 732
           +  Y  PE + SG+L   P+ DV+S G+IL  +L  R
Sbjct: 174 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 209

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSL-----QGPSEFQQEIDILSK 579
           N+     +GEG +G +   L  H     +VA+K+++   L     QG    ++EI  L  
Sbjct: 5   NYQIVKTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 60
Query: 580 IRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           +RHP+++ L  V    +   +V EY  N  L D +  +D    +S Q   R   ++ S +
Sbjct: 61  LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAV 116
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +   C  H IVH DLKP N+LLD +   K++DFG+S  ++      N     C     G
Sbjct: 117 EY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSC-----G 164
Query: 698 TFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGR 732
           +  Y  PE + SG+L   P+ DV+S G+IL  +L  R
Sbjct: 165 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 200

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 554 VAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACPEVW----TLVYEYLPNG 606
           VA+K L      GP   S +Q+EI+IL  + H ++V   G C +       LV EY+P G
Sbjct: 40  VAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 97
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
           SL D L        +     +  A ++C  + +LH+      +H  L   N+LLD + + 
Sbjct: 98  SLRDYLP----RHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 150
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG+++      +   +     R D      +  PE L   +    SDV+SFG+ L 
Sbjct: 151 KIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 727 RLLT 730
            LLT
Sbjct: 206 ELLT 209

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTL--VG 590
           +G G +  +     +  Q  VAIK +   +L+G     + EI +L KI+HPN+V L  + 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  L+ + +  G L DR+  K      + +   R+  ++   + +LH      IVH
Sbjct: 86  ESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDL---GIVH 139
Query: 651 GDLKPANIL---LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N+L   LD +    +SDFG+S+      + S   T C      GT  Y+ PE L
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---TAC------GTPGYVAPEVL 190
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
           A    +   D +S G+I   LL G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 554 VAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACPEVW----TLVYEYLPNG 606
           VA+K L      GP   S +Q+EI+IL  + H ++V   G C +       LV EY+P G
Sbjct: 41  VAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 98
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
           SL D L        +     +  A ++C  + +LH+      +H  L   N+LLD + + 
Sbjct: 99  SLRDYLP----RHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 151
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG+++      +   +     R D      +  PE L   +    SDV+SFG+ L 
Sbjct: 152 KIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 727 RLLT 730
            LLT
Sbjct: 207 ELLT 210

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSL-----QGPSEFQQEIDILSK 579
           N+     +GEG +G +   L  H     +VA+K+++   L     QG    ++EI  L  
Sbjct: 9   NYQIVKTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 64
Query: 580 IRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           +RHP+++ L  V    +   +V EY  N  L D +  +D    +S Q   R   ++ S +
Sbjct: 65  LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK---MSEQEARRFFQQIISAV 120
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +   C  H IVH DLKP N+LLD +   K++DFG+S  ++      N     C     G
Sbjct: 121 EY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSC-----G 168
Query: 698 TFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGR 732
           +  Y  PE + SG+L   P+ DV+S G+IL  +L  R
Sbjct: 169 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 204

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D  +  D S  L+      I + L  +L 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKTFMDASA-LTGIPLPLIKSYLFQLLQ 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 169
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V +++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 90  IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 148 SCTYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLARDI--NNIDYYKK 202
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 203 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 524 EGATHNFDPSLK-IGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           +G+ +++   L+ +G G +G +++ + +    + VA  +  P+ L   +  + EI I+++
Sbjct: 46  QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT-VKNEISIMNQ 104
Query: 580 IRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HP L+ L  A  + +   L+ E+L  G L DR++ +D    +S    I    + C  L
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQACEGL 162
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDP 695
             +H    HSIVH D+KP NI+ +    S  K+ DFG++  L+ +EI    T        
Sbjct: 163 KHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-------- 211
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
             T  +  PE +    +   +D+++ G++   LL+G
Sbjct: 212 -ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 95  IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 153 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 207
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 208 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 167
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 167
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIR 581
           +FD    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++EI+I S +R
Sbjct: 16  DFDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 582 HPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
           HPN++ +     +     L+ E+ P G L   L               R AT +  +   
Sbjct: 74  HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF------DEQRSATFMEELADA 127
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LH C    ++H D+KP N+L+      K++DFG     S +  S     +C      GT 
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMC------GTL 177
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            Y+ PE +       K D++  G++    L G P  
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 116
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 168
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 116
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 168
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 92  IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 150 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 204
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 205 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               ++++  +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 207 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 261
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 262 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 169
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 116
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 168
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 169
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 35/211 (16%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--VGA 591
           +G G +  ++  K  L     A+K +        S  + EI +L KI+H N+VTL  +  
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 592 CPEVWTLVYEYLPNGSLEDRL------SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
               + LV + +  G L DR+      + KD S          +  ++ S + +LH    
Sbjct: 77  STTHYYLVMQLVSGGELFDRILERGVYTEKDAS---------LVIQQVLSAVKYLHE--- 124
Query: 646 HSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           + IVH DLKP N+L    + N    ++DFG+S+ + QN I S   T C      GT  Y+
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMS---TAC------GTPGYV 174
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE LA    +   D +S G+I   LL G P
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYP 205

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  ++  PP               LS +  +
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARE--PPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 154 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 210 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G ++ G LR  +  VA+K      P  L+  ++F QE  IL +  HPN+V L+
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLI 178
Query: 590 GACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G C +     +V E +  G     L  +     L  +T +++  +  + + +L S     
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            +H DL   N L+    V K+SDFG+SR  +    +++      R  P     +  PE L
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL---RQVP---VKWTAPEAL 287
Query: 708 ASGELTPKSDVYSFGIIL 725
             G  + +SDV+SFGI+L
Sbjct: 288 NYGRYSSESDVWSFGILL 305

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G ++ G LR  +  VA+K      P  L+  ++F QE  IL +  HPN+V L+
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLI 178
Query: 590 GACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G C +     +V E +  G     L  +     L  +T +++  +  + + +L S     
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            +H DL   N L+    V K+SDFG+SR  +    +++      R  P     +  PE L
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL---RQVP---VKWTAPEAL 287
Query: 708 ASGELTPKSDVYSFGIIL 725
             G  + +SDV+SFGI+L
Sbjct: 288 NYGRYSSESDVWSFGILL 305

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 4   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 64  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 118
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 170
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +   +      PL       I + L  +L 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP-----LIKSYLFQLLQ 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 167
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIR 581
           +FD    +G+G +G++Y  L R  Q    +A+K+L    L+      + ++EI+I S +R
Sbjct: 15  DFDIVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 582 HPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
           HPN++ +     +     L+ E+ P G L   L               R AT +  +   
Sbjct: 73  HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF------DEQRSATFMEELADA 126
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LH C    ++H D+KP N+L+      K++DFG     S +  S     +C      GT 
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMC------GTL 176
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            Y+ PE +       K D++  G++    L G P  
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +   +      PL       I + L  +L 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP-----LIKSYLFQLLQ 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 169
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 531 DPS----LKI-GEGGYGSIY-----KGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILS 578
           DPS    LK+ G+G +G ++      G       A+K+L   +L+       + E DIL 
Sbjct: 22  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 579 KIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           ++ HP +V L  A        L+ ++L  G L  RLS        + +       EL   
Sbjct: 82  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 138
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LHS     I++ DLKP NILLD     KL+DFG+S+    +E      + C      
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC------ 187
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GT  YM PE +     T  +D +SFG+++  +LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E++IL +IRHPN++TL  +        L+ E +  G L D L+ K++   L+    
Sbjct: 61  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEI 682
            +   ++   + +LHS +   I H DLKP NI LLD N  +   KL DFGI+     ++I
Sbjct: 118 TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKI 169
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE- 740
            + N       +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+ 
Sbjct: 170 EAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
Query: 741 -------VQYALDTGKLKNLLDPLAGDW 761
                  V Y  D     N    LA D+
Sbjct: 226 TLTNISAVNYDFDEEYFSN-TSELAKDF 252

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +  + I     
Sbjct: 154 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDXXKK 208
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 209 T----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L +  L+D +    ++  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFL-HQDLKDFM----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 535 KIGEGGYGSI----YKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+    Y  L  +    VA+K L         +FQ+EI IL  +    +V  
Sbjct: 14  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 589 VGAC-----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
            G       PE+  LV EYLP+G L D L  + +   L     +  ++++C  + +L S 
Sbjct: 74  RGVSYGPGRPEL-RLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS- 129
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                VH DL   NIL+++    K++DFG+++ L  ++          R   +    +  
Sbjct: 130 --RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-----DXXVVREPGQSPIFWYA 182
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT 730
           PE L+    + +SDV+SFG++L  L T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E++IL +IRHPN++TL  +        L+ E +  G L D L+ K++   L+    
Sbjct: 54  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEA 110
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEI 682
            +   ++   + +LHS +   I H DLKP NI LLD N  +   KL DFGI+     ++I
Sbjct: 111 TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKI 162
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE- 740
            + N       +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+ 
Sbjct: 163 EAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 741 -------VQYALDTGKLKNLLDPLAGDW 761
                  V Y  D     N    LA D+
Sbjct: 219 TLTNISAVNYDFDEEYFSN-TSELAKDF 245

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 531 DPS----LKI-GEGGYGSIY-----KGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILS 578
           DPS    LK+ G+G +G ++      G       A+K+L   +L+       + E DIL 
Sbjct: 23  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 579 KIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           ++ HP +V L  A        L+ ++L  G L  RLS        + +       EL   
Sbjct: 83  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 139
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LHS     I++ DLKP NILLD     KL+DFG+S+    +E      + C      
Sbjct: 140 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC------ 188
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GT  YM PE +     T  +D +SFG+++  +LTG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 11  NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 71  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 125
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 177
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 531 DPS----LKI-GEGGYGSIY-----KGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILS 578
           DPS    LK+ G+G +G ++      G       A+K+L   +L+       + E DIL 
Sbjct: 22  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 579 KIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           ++ HP +V L  A        L+ ++L  G L  RLS        + +       EL   
Sbjct: 82  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 138
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LHS     I++ DLKP NILLD     KL+DFG+S+    +E      + C      
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC------ 187
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           GT  YM PE +     T  +D +SFG+++  +LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E++IL +IRHPN++TL  +        L+ E +  G L D L+ K++   L+    
Sbjct: 75  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEA 131
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEI 682
            +   ++   + +LHS +   I H DLKP NI LLD N  +   KL DFGI+     ++I
Sbjct: 132 TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKI 183
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE- 740
            + N       +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+ 
Sbjct: 184 EAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
Query: 741 -------VQYALDTGKLKNLLDPLAGDW 761
                  V Y  D     N    LA D+
Sbjct: 240 TLTNISAVNYDFDEEYFSN-TSELAKDF 266

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLSF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 8   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 68  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 122
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 174
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 139 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 194
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 195 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  +  Y   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 169
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 154 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 210 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 29  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 89  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 147 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 202
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 203 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 25  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 85  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 143 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 198
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 199 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 169
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 28  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 88  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 146 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 201
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 202 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G   NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 1   GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
            HPN+V L+          LV+E+L     +D     D S  L+      I + L  +L 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQ 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            L  C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------T 167
Query: 699 FAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
             Y  PE L   +    + D++S G I   ++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           +G+G +G +   K  +   + A+K++    ++  ++     +E+ +L ++ HPN++ L  
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +      S     RI  ++ S + ++H  K   I
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNK---I 147
Query: 649 VHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           VH DLKP N+LL     DAN   ++ DFG+S     ++            D  GT  Y+ 
Sbjct: 148 VHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---------KMKDKIGTAYYIA 196
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L  G    K DV+S G+IL  LL+G P
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCP 225

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLVG 590
           +G+G +G +   K  +   + A+K++    ++  ++ +   +E+ +L ++ HPN++ L  
Sbjct: 57  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +      S     RI  ++ S + ++H  K   I
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNK---I 170
Query: 649 VHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           VH DLKP N+LL     DAN   ++ DFG+S     ++            D  GT  Y+ 
Sbjct: 171 VHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---------KMKDKIGTAYYIA 219
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L  G    K DV+S G+IL  LL+G P
Sbjct: 220 PEVL-HGTYDEKCDVWSTGVILYILLSGCP 248

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKI 580
           G+  NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 581 RHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            HPN+V L+     + T    YL    ++  L    ++  L+      I + L  +L  L
Sbjct: 63  NHPNIVKLLDV---IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLW 171
Query: 701 YMDPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
           Y  PE L   +    + D++S G I   ++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 536 IGEGGYGSIYK---------GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +G+GGYG +++         G +  M+V  K +   + +  +  + E +IL +++HP +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L+ A        L+ EYL  G L  +L   +        T      E+   L  LH   
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQ-- 139
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I++ DLKP NI+L+     KL+DFG+ +    +   ++  T C      GT  YM P
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH--TFC------GTIEYMAP 190
Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L         D +S G ++  +LTG P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAP 219

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            +        GT  Y+ PE L     +  SD+++ G I+ +L+ G P  
Sbjct: 192 NSFV------GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLVG 590
           +G+G +G +   K  +   + A+K++    ++  ++ +   +E+ +L ++ HPN++ L  
Sbjct: 58  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +      S     RI  ++ S + ++H  K   I
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNK---I 171
Query: 649 VHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           VH DLKP N+LL     DAN   ++ DFG+S     ++            D  GT  Y+ 
Sbjct: 172 VHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---------KMKDKIGTAYYIA 220
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L  G    K DV+S G+IL  LL+G P
Sbjct: 221 PEVL-HGTYDEKCDVWSTGVILYILLSGCP 249

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 11  NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 71  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 125
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 177
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL++    M VA+KML P + L        E+ +LS +  H N+V
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 587 TLVGAC----PEVWTLVYEYLPNGSL-------EDRLSCKDNSPPL--------SWQTRI 627
            L+GAC    P +  ++ EY   G L        D   C   SP +          +  +
Sbjct: 114 NLLGACTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++
Sbjct: 172 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHI------KNDS 222
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
               + + +    +M PE + +   T +SDV+S+GI L  L +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLV 586
           +G G +G+++KG+         + V IK++   S  G   FQ   D    +  + H ++V
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 587 TLVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            L+G CP     LV +YLP GSL D +  + +   L  Q  +    ++   + +L     
Sbjct: 97  RLLGLCPGSSLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYYLEE--- 151
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H +VH +L   N+LL +    +++DFG++  L  ++           ++ K    +M  E
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------LLYSEAKTPIKWMALE 205
Query: 706 FLASGELTPKSDVYSFGIILLRLLT 730
            +  G+ T +SDV+S+G+ +  L+T
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 154 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 210 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GLLRH-----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      G+ +      + VA+KML   + +   S+   E++++  I +H N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  +  Y   G+L + L  +   PP               ++++  +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
               +L   + +L S K    +H DL   N+L+  N V K++DFG++R +  N I     
Sbjct: 161 SCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKK 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
           T    T+ +    +M PE L     T +SDV+SFG+++  + T  G P  GI  E  + L
Sbjct: 216 T----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL++    M VA+KML P + L        E+ +LS +  H N+V
Sbjct: 47  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 587 TLVGAC----PEVWTLVYEYLPNGSL-------EDRLSCKDNSPPL--------SWQTRI 627
            L+GAC    P +  ++ EY   G L        D   C   SP +          +  +
Sbjct: 107 NLLGACTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++
Sbjct: 165 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDS 215
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
               + + +    +M PE + +   T +SDV+S+GI L  L +
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLV 586
           +G G +G+++KG+         + V IK++   S  G   FQ   D    +  + H ++V
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 587 TLVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            L+G CP     LV +YLP GSL D +  + +   L  Q  +    ++   + +L     
Sbjct: 79  RLLGLCPGSSLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYYLEE--- 133
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H +VH +L   N+LL +    +++DFG++  L  ++           ++ K    +M  E
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------LLYSEAKTPIKWMALE 187
Query: 706 FLASGELTPKSDVYSFGIILLRLLT 730
            +  G+ T +SDV+S+G+ +  L+T
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLV 589
           IG+G +G +Y G         +Q AIK L   + +Q    F +E  ++  + HPN++ L+
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 590 GAC--PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           G    PE +  ++  Y+ +G L   +     +P +  +  I    ++   + +L   K  
Sbjct: 89  GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQK-- 144
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             VH DL   N +LD +F  K++DFG++R +   E  S       R   K T      E 
Sbjct: 145 -FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL----ES 199
Query: 707 LASGELTPKSDVYSFGIILLRLLT 730
           L +   T KSDV+SFG++L  LLT
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 11  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 69  DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 124 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 225

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 34  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 81
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 82  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 136
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 137 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            +        GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 193 NSFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 12  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 70  DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 125 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 226

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 17  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 75  DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 130 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 231

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 572 QEIDILSKIR-HPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           +E+DIL K+  HPN++ L         + LV++ +  G L D L+ K     LS +   +
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 128
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           I   L  V+  LH     +IVH DLKP NILLD +   KL+DFG S              
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS-------------- 171
Query: 689 LCCRTDPK-------GTFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPAL 735
             C+ DP        GT +Y+ PE +             + D++S G+I+  LL G P  
Sbjct: 172 --CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 736 GITKEV 741
              K++
Sbjct: 230 WHRKQM 235

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKG---LLRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L   +    K+      +G PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKG---LLRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L   +    K+      +G PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYR 169
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 572 QEIDILSKIR-HPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           +E+DIL K+  HPN++ L         + LV++ +  G L D L+ K     LS +   +
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 128
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           I   L  V+  LH     +IVH DLKP NILLD +   KL+DFG S              
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS-------------- 171
Query: 689 LCCRTDPK-------GTFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPAL 735
             C+ DP        GT +Y+ PE +             + D++S G+I+  LL G P  
Sbjct: 172 --CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 736 GITKEV 741
              K++
Sbjct: 230 WHRKQM 235

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 536 IGEGGYGSIYK---------GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +G+GGYG +++         G +  M+V  K +   + +  +  + E +IL +++HP +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L+ A        L+ EYL  G L  +L   +        T      E+   L  LH   
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQ-- 139
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--LCCRTDPKGTFAYM 702
              I++ DLKP NI+L+     KL+DFG    L +  I     T   C      GT  YM
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFG----LCKESIHDGTVTHXFC------GTIEYM 188
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE L         D +S G ++  +LTG P
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAP 219

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 31  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 78
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 133
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 134 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 190 NAFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 14  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 72  DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 127 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 228

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 528 HNFDPSLKIGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSK 579
           +N      +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 580 I-RHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLS-------CKDNSPPLSWQTRIRI 629
           + +H N+V L+GAC       ++ EY   G L + L         K++  PL  +  +  
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           ++++   + FL S    + +H D+   N+LL    V+K+ DFG++R +       N++  
Sbjct: 166 SSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNY 216
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             + + +    +M PE +     T +SDV+S+GI+L  + +
Sbjct: 217 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           +V L+     + T    YL    +   L    ++  L+      I + L  +L  L  C 
Sbjct: 63  IVKLLDV---IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
            H ++H DLKP N+L++     KL+DFG++R        +    +   T    T  Y  P
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR--------AFGVPVRTYTHEVVTLWYRAP 171
Query: 705 EFLASGELTPKS-DVYSFGIILLRLLTGR 732
           E L   +    + D++S G I   ++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT A++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL++    M VA+KML P + L        E+ +LS +  H N+V
Sbjct: 49  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 587 TLVGAC----PEVWTLVYEYLPNGSL-------EDRLSCKDNSPPL--------SWQTRI 627
            L+GAC    P +  ++ EY   G L        D   C   SP +          +  +
Sbjct: 109 NLLGACTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++
Sbjct: 167 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDS 217
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
               + + +    +M PE + +   T +SDV+S+GI L  L +
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 10  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 57
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 58  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 112
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 113 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 169 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 31  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 78
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 133
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 134 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 190 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 192 NXFV------GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 9   DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 56
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 57  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 111
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 112 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 168 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL++    M VA+KML P + L        E+ +LS +  H N+V
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 587 TLVGAC----PEVWTLVYEYLPNGSL-------EDRLSCKDNSPPL--------SWQTRI 627
            L+GAC    P +  ++ EY   G L        D   C   SP +          +  +
Sbjct: 114 NLLGACTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++
Sbjct: 172 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDS 222
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
               + + +    +M PE + +   T +SDV+S+GI L  L +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 572 QEIDILSKIR-HPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           +E+DIL K+  HPN++ L         + LV++ +  G L D L+ K     LS +   +
Sbjct: 59  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRK 115
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           I   L  V+  LH     +IVH DLKP NILLD +   KL+DFG S              
Sbjct: 116 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS-------------- 158
Query: 689 LCCRTDPK-------GTFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPAL 735
             C+ DP        GT +Y+ PE +             + D++S G+I+  LL G P  
Sbjct: 159 --CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
Query: 736 GITKEV 741
              K++
Sbjct: 217 WHRKQM 222

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 31  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 78
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 133
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 134 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 190 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 169
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K   L   +   PS   +EI +L ++ HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 64  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 170
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 30  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 77
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 78  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TR 132
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 133 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +        GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 189 NSFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 11  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 58
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 59  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 113
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 114 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 170 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQG-PSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK    L    VA+K +   +  +G PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L     +D     D S  L+      I + L  +L  L  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAF 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           C  H ++H DLKP N+L++     KL+DFG++R       +  +  +        T  Y 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYR 169
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGR 732
            PE L   +    + D++S G I   ++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 523 IEGATHNFDPS----LKI-GEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEF 570
           ++  +   DPS    LK+ G+G +G ++  L+R +         A+K+L   +L+     
Sbjct: 18  VKAGSEKADPSHFELLKVLGQGSFGKVF--LVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 571 --QQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
             + E DIL+ + HP +V L  A        L+ ++L  G L  RLS        + +  
Sbjct: 76  RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDV 132
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
                EL   L  LHS     I++ DLKP NILLD     KL+DFG+S+    +E     
Sbjct: 133 KFYLAELALGLDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE--KKA 187
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
            + C      GT  YM PE +     +  +D +S+G+++  +LTG
Sbjct: 188 YSFC------GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 34  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 81
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 82  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 136
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 137 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 193 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 8   DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 55
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 56  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 110
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 111 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 167 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 192 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 535 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +GS+   L R+          VA+K L         +FQ+EI IL  +    +V
Sbjct: 30  QLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 587 TL----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                  G   +   LV EYLP+G L D L  + +   L     +  ++++C  + +L S
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                 VH DL   NIL+++    K++DFG+++ L  ++          R   +    + 
Sbjct: 146 ---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-----DYYVVREPGQSPIFWY 197
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT 730
            PE L+    + +SDV+SFG++L  L T
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 192 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSI----YKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+    Y  L  +    VA+K L         +FQ+EI IL  +    +V  
Sbjct: 17  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 589 ----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                G   +   LV EYLP+G L D L  + +   L     +  ++++C  + +L S  
Sbjct: 77  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS-- 132
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               VH DL   NIL+++    K++DFG+++ L  ++          R   +    +  P
Sbjct: 133 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-----DYYVVREPGQSPIFWYAP 186
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L+    + +SDV+SFG++L  L T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 192 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL++    M VA+KML P + L        E+ +LS +  H N+V
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 587 TLVGAC----PEVWTLVYEYLPNGSL-------EDRLSCKDNSPPL--------SWQTRI 627
            L+GAC    P +  ++ EY   G L        D   C   SP +          +  +
Sbjct: 91  NLLGACTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++
Sbjct: 149 SFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDS 199
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
               + + +    +M PE + +   T +SDV+S+GI L  L +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 33  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 80
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 135
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 136 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 192 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 37  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 95  DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 150 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 251

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 534 LKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +KIGEG  G +     +H   QVA+K +     Q       E+ I+    H N+V +  +
Sbjct: 51  IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIFLHSCKP 645
                E+W +V E+L  G+L D ++           TR+   +IAT   SVL  L     
Sbjct: 111 YLVGDELW-VVMEFLEGGALTDIVT----------HTRMNEEQIATVCLSVLRALSYLHN 159
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             ++H D+K  +ILL ++   KLSDFG    +S+ E+      +       GT  +M PE
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLV-------GTPYWMAPE 211
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            ++      + D++S GI+++ ++ G P
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEP 239

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 38  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 85
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 86  RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 140
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 141 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                     GT  Y+ PE L        SD+++ G I+ +L+ G P  
Sbjct: 197 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S + +H N+V
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 587 TLVGACPEVW--TLVYEYLPNGSLEDRLS-------CKDNSPPLSWQTRIRIATELCSVL 637
            L+GAC       ++ EY   G L + L         K++  PL  +  +  ++++   +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            FL S    + +H D+   N+LL    V+K+ DFG++R +       N++    + + + 
Sbjct: 166 AFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVKGNARL 216
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
              +M PE +     T +SDV+S+GI+L  + +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKG+         + VAIK+L  + S +   E   E  +++ +  P +  L
Sbjct: 25  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C      LV + +P G L D +  ++N   L  Q  +    ++   + +L   +   
Sbjct: 85  LGICLTSTVQLVTQLMPYGCLLDHV--RENRGRLGSQDLLNWCMQIAKGMSYLEDVR--- 139
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           +VH DL   N+L+ +    K++DFG++R L  +E   +          K    +M  E +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA------DGGKVPIKWMALESI 193
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
                T +SDV+S+G+ +  L+T   +P  GI  +E+   L+ G+
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE 238

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVG 590
           +G G +G ++    RH     A+K+L    +    + +   D   +LS + HP ++ + G
Sbjct: 14  LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 591 ACPEVWT--LVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHS 647
              +     ++ +Y+  G L   L      P P++       A E+C  L +LHS     
Sbjct: 74  TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA----KFYAAEVCLALEYLHS---KD 126
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           I++ DLKP NILLD N   K++DFG +++     +      LC      GT  Y+ PE +
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLC------GTPDYIAPEVV 175
Query: 708 ASGELTPKSDVYSFGIILLRLLTG 731
           ++       D +SFGI++  +L G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNF-DPSLKIGEGGYGSIYKGLLRHMQ--VA 555
           R  ++E    SH  QF +        G   ++ D  +KIGEG  G +    +R     VA
Sbjct: 122 RSPQREPQRVSHE-QFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 180
Query: 556 IKMLHPHSLQGPSEFQQEIDILSKIRHPNLV-----TLVGACPEVWTLVYEYLPNGSLED 610
           +K +     Q       E+ I+   +H N+V      LVG   E+W +V E+L  G+L D
Sbjct: 181 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELW-VVMEFLEGGALTD 237
Query: 611 RLSCKDNSPPLSWQTRI---RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
            ++           TR+   +IA    +VL  L       ++H D+K  +ILL  +   K
Sbjct: 238 IVT----------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           LSDFG    +S+ E+      +       GT  +M PE ++     P+ D++S GI+++ 
Sbjct: 288 LSDFGFCAQVSK-EVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 728 LLTGRP 733
           ++ G P
Sbjct: 340 MVDGEP 345

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLV----- 589
           IG+G +G +++G  R  +VA+K+    S +  S F++ EI     +RH N++  +     
Sbjct: 50  IGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 590 --GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH------ 641
             G   ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH      
Sbjct: 108 DNGTWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             KP +I H DLK  NIL+  N    ++D G    L+    S+ +T         GT  Y
Sbjct: 163 QGKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 702 MDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           M PE L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 535 KIGEGGYGSI----YKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+    Y  L  +    VA+K L         +FQ+EI IL  +    +V  
Sbjct: 18  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 589 ----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                G   +   LV EYLP+G L D L  + +   L     +  ++++C  + +L S  
Sbjct: 78  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS-- 133
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               VH DL   NIL+++    K++DFG+++ L  ++          R   +    +  P
Sbjct: 134 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-----DYYVVREPGQSPIFWYAP 187
Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L+    + +SDV+SFG++L  L T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           +G+G +G +   K  +   + A+K++    ++  ++     +E+ +L ++ HPN++ L  
Sbjct: 40  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +      S     RI  ++ S + ++H  K   I
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKNK---I 153
Query: 649 VHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           VH DLKP N+LL     DAN   ++ DFG+S   +  E S          D  GT  Y+ 
Sbjct: 154 VHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKK------MKDKIGTAYYIA 202
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L  G    K DV+S G+IL  LL+G P
Sbjct: 203 PEVL-HGTYDEKCDVWSTGVILYILLSGCP 231

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 535 KIGEGGYGSIYKGLL-------RHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNL 585
           ++GE  +G +YKG L       +   VAIK L   + +GP   EF+ E  + ++++HPN+
Sbjct: 33  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNV 91
Query: 586 VTLVGACP--EVWTLVYEYLPNGSLEDRL----------SCKDN-------SPPLSWQTR 626
           V L+G     +  ++++ Y  +G L + L          S  D+        PP      
Sbjct: 92  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP----DF 147
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS-- 684
           + +  ++ + + +L S   H +VH DL   N+L+      K+SD G+ R +   +     
Sbjct: 148 VHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
            N+ L  R        +M PE +  G+ +  SD++S+G++L  + +
Sbjct: 205 GNSLLPIR--------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 536 IGEGGYGSIYK----GL-----LRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
           +GEG +G +      GL      R  +VA+KML   + +   S+   E++++  I +H N
Sbjct: 77  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
           ++ L+GAC +   L  + EY   G+L + L  +   PP               LS +  +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR--RPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
             A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +      
Sbjct: 195 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 250
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 745
                T+ +    +M PE L     T +SDV+SFG++L  + T  G P  G+  E  + L
Sbjct: 251 -----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 15  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 62
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 63  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TR 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 118 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 173
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 174 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 214

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 553 QVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSL 608
           +VAIK ++    Q    E  +EI  +S+  HPN+V+   +     E+W LV + L  GS+
Sbjct: 42  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSV 100
Query: 609 EDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
            D +       +  S  L   T   I  E+   L +LH    +  +H D+K  NILL  +
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGED 157
Query: 664 FVSKLSDFGISRFLSQ-NEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSF 721
              +++DFG+S FL+   +I+ N      R    GT  +M PE +        K+D++SF
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKV----RKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
Query: 722 GIILLRLLTG 731
           GI  + L TG
Sbjct: 214 GITAIELATG 223

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 36  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 83
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 84  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 138
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 139 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 194
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 195 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + ++   + L    + AIK+L    +   ++     
Sbjct: 30  DFKFGKI------------LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT 77
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 78  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TR 132
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 133 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 189 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           IG G +G +   L+RH       A+K+L    +   S+   F +E DI++    P +V L
Sbjct: 77  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             A  +     +V EY+P G L + +S  D   P  W    R  T    V++ L +    
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---RFYT--AEVVLALDAIHSM 187
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+KP N+LLD +   KL+DFG    +++  +   +T +       GT  Y+ PE 
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-------GTPDYISPEV 240
Query: 707 LAS----GELTPKSDVYSFGIILLRLLTG 731
           L S    G    + D +S G+ L  +L G
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGS--IYKGLLRHMQVAIKMLHPHSLQGPSEF---Q 571
           DF F +I            +GEG + +  + + L    + AIK+L    +   ++     
Sbjct: 31  DFKFGKI------------LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVT 78
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVY--EYLPNGSLED---RLSCKDNSPPLSWQTR 626
           +E D++S++ HP  V L     +   L +   Y  NG L     ++   D +      TR
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----CTR 133
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
              A E+ S L +LH      I+H DLKP NILL+ +   +++DFG ++ LS     +  
Sbjct: 134 FYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                     GT  Y+ PE L        SD+++ G I+ +L+ G P
Sbjct: 190 NXFV------GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLVG 590
           +G+G +G +   K  +   + A+K++    ++  ++ +   +E+ +L ++ HPN+  L  
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              +   + LV E    G L D +  +      S     RI  ++ S + + H  K   I
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYXHKNK---I 147
Query: 649 VHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           VH DLKP N+LL     DAN   ++ DFG+S     ++            D  GT  Y+ 
Sbjct: 148 VHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASKKXK---------DKIGTAYYIA 196
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE L  G    K DV+S G+IL  LL+G P
Sbjct: 197 PEVL-HGTYDEKCDVWSTGVILYILLSGCP 225

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 535 KIGEGGYGSIYKGLL-------RHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNL 585
           ++GE  +G +YKG L       +   VAIK L   + +GP   EF+ E  + ++++HPN+
Sbjct: 16  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNV 74
Query: 586 VTLVGACP--EVWTLVYEYLPNGSLEDRL----------SCKDN-------SPPLSWQTR 626
           V L+G     +  ++++ Y  +G L + L          S  D+        PP      
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP----DF 130
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS-- 684
           + +  ++ + + +L S   H +VH DL   N+L+      K+SD G+ R +   +     
Sbjct: 131 VHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
            N+ L  R        +M PE +  G+ +  SD++S+G++L  + +
Sbjct: 188 GNSLLPIR--------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 553 QVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSL 608
           +VAIK ++    Q    E  +EI  +S+  HPN+V+   +     E+W LV + L  GS+
Sbjct: 37  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSV 95
Query: 609 EDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
            D +       +  S  L   T   I  E+   L +LH    +  +H D+K  NILL  +
Sbjct: 96  LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGED 152
Query: 664 FVSKLSDFGISRFLSQ-NEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSF 721
              +++DFG+S FL+   +I+ N      R    GT  +M PE +        K+D++SF
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKV----RKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
Query: 722 GIILLRLLTG 731
           GI  + L TG
Sbjct: 209 GITAIELATG 218

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           IG G +G +   L+RH       A+K+L    +   S+   F +E DI++    P +V L
Sbjct: 82  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             A  +     +V EY+P G L + +S  D   P  W    R  T    V++ L +    
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---RFYT--AEVVLALDAIHSM 192
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+KP N+LLD +   KL+DFG    +++  +   +T +       GT  Y+ PE 
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-------GTPDYISPEV 245
Query: 707 LAS----GELTPKSDVYSFGIILLRLLTG 731
           L S    G    + D +S G+ L  +L G
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNF-DPSLKIGEGGYGSIYKGLLRHMQ--VA 555
           R  ++E    SH  QF +        G   ++ D  +KIGEG  G +    +R     VA
Sbjct: 45  RSPQREPQRVSH-EQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 103
Query: 556 IKMLHPHSLQGPSEFQQEIDILSKIRHPNLV-----TLVGACPEVWTLVYEYLPNGSLED 610
           +K +     Q       E+ I+   +H N+V      LVG   E+W +V E+L  G+L D
Sbjct: 104 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELW-VVMEFLEGGALTD 160
Query: 611 RLSCKDNSPPLSWQTRI---RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
            ++           TR+   +IA    +VL  L       ++H D+K  +ILL  +   K
Sbjct: 161 IVT----------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 210
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           LSDFG    +S+ E+      +       GT  +M PE ++     P+ D++S GI+++ 
Sbjct: 211 LSDFGFCAQVSK-EVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 728 LLTGRP 733
           ++ G P
Sbjct: 263 MVDGEP 268

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
           IG G +G +   L+RH       A+K+L    +   S+   F +E DI++    P +V L
Sbjct: 82  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             A  +     +V EY+P G L + +S  D   P  W    R  T    V++ L +    
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---RFYT--AEVVLALDAIHSM 192
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+KP N+LLD +   KL+DFG    +++  +   +T +       GT  Y+ PE 
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-------GTPDYISPEV 245
Query: 707 LAS----GELTPKSDVYSFGIILLRLLTG 731
           L S    G    + D +S G+ L  +L G
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIR 581
           ++D    IG G +G +   L+RH       A+K+L    +   S+   F +E DI++   
Sbjct: 76  DYDVVKVIGRGAFGEV--QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 582 HPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
            P +V L  A  +     +V EY+P G L + +S  D   P  W    +  T    V++ 
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---KFYT--AEVVLA 186
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L +     ++H D+KP N+LLD +   KL+DFG    + +  +   +T +       GT 
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-------GTP 239
Query: 700 AYMDPEFLAS----GELTPKSDVYSFGIILLRLLTG 731
            Y+ PE L S    G    + D +S G+ L  +L G
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV- 586
            D  +KIGEG  G +    +R     VA+K +     Q       E+ I+   +H N+V 
Sbjct: 31  LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 587 ----TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IA    +VL  
Sbjct: 91  MYNSYLVGD--ELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLQA 137
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S+ E+      +       GT 
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV-------GTP 189
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++     P+ D++S GI+++ ++ G P
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 223

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 26/224 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ-EIDILSKIRHPNLVTLVG---- 590
           +G+G YG +++GL     VA+K+      Q  S F++ EI     +RH N++  +     
Sbjct: 16  VGKGRYGEVWRGLWHGESVAVKIFSSRDEQ--SWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 591 ---ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC--SVLIFLHSCKP 645
              +  ++W L+  Y  +GSL D L  +   P L+ +  +  A  L    V IF    KP
Sbjct: 74  SRNSSTQLW-LITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK-GTFAYMDP 704
            +I H D K  N+L+ +N    ++D G++   SQ      +  L    +P+ GT  YM P
Sbjct: 133 -AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ-----GSDYLDIGNNPRVGTKRYMAP 186
Query: 705 EFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           E L         E    +D+++FG++L  +       GI ++ +
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYR 230

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV- 586
            D  +KIGEG  G +    +R     VA+K +     Q       E+ I+   +H N+V 
Sbjct: 33  LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 587 ----TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IA    +VL  
Sbjct: 93  MYNSYLVGD--ELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLQA 139
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S+ E+      +       GT 
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV-------GTP 191
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++     P+ D++S GI+++ ++ G P
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 225

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV- 586
            D  +KIGEG  G +    +R     VA+K +     Q       E+ I+   +H N+V 
Sbjct: 26  LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 587 ----TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IA    +VL  
Sbjct: 86  MYNSYLVGD--ELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLQA 132
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S+ E+      +       GT 
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV-------GTP 184
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++     P+ D++S GI+++ ++ G P
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV- 586
            D  +KIGEG  G +    +R     VA+K +     Q       E+ I+   +H N+V 
Sbjct: 22  LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 587 ----TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
                LVG   E+W +V E+L  G+L D ++           TR+   +IA    +VL  
Sbjct: 82  MYNSYLVGD--ELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLQA 128
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           L       ++H D+K  +ILL  +   KLSDFG    +S+ E+      +       GT 
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV-------GTP 180
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +M PE ++     P+ D++S GI+++ ++ G P
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y  + +     VAIK +     Q   ++Q   +E+  L K+RHPN +   
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G      T  LV EY   GS  D L    +  PL       +       L +LHS   H+
Sbjct: 82  GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HN 135
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL    + KL DFG     S + ++  N  +       GT  +M PE +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFG-----SASIMAPANXFV-------GTPYWMAPEVI 183
Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPAL 735
            +   G+   K DV+S GI  + L   +P L
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 89  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 145
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 200
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIF 226

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 89  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 145
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 200
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIF 226

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 96  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 152
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 207
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIF 233

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 97  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 153
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 208
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIF 234

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 88  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 144
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 199
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIF 225

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           +IG G +G++Y  + +     VAIK +     Q   ++Q   +E+  L K+RHPN +   
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G      T  LV EY   GS  D L    +  PL       +       L +LHS   H+
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HN 174
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL    + KL DFG     S + ++  N  +       GT  +M PE +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFG-----SASIMAPANXFV-------GTPYWMAPEVI 222
Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPAL 735
            +   G+   K DV+S GI  + L   +P L
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           KIGEG YG+++K   R  H  VA+K   L       PS   +EI +L +++H N+V L  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V    +  TLV+E+      +   SC  +  P        + + L  +L  L  C   ++
Sbjct: 69  VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI------VKSFLFQLLKGLGFCHSRNV 122
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLKP N+L++ N   KL++FG++R        +    + C +    T  Y  P+ L 
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR--------AFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 709 SGELTPKS-DVYSFGIILLRLLT-GRP 733
             +L   S D++S G I   L   GRP
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRP 201

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           KIGEG YG+++K   R  H  VA+K   L       PS   +EI +L +++H N+V L  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           V    +  TLV+E+      +   SC  +  P        + + L  +L  L  C   ++
Sbjct: 69  VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI------VKSFLFQLLKGLGFCHSRNV 122
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLKP N+L++ N   KL+DFG++R        +    + C +    T  Y  P+ L 
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR--------AFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 709 SGELTPKS-DVYSFGIILLRL 728
             +L   S D++S G I   L
Sbjct: 175 GAKLYSTSIDMWSAGCIFAEL 195

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTLVG 590
           +G+G   ++++G  RH +     AIK+ +  S   P + Q +E ++L K+ H N+V L  
Sbjct: 17  LGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 591 ACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
              E  T    L+ E+ P GSL   L    N+  L  ++   I   L  V+  ++  + +
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP-ESEFLIV--LRDVVGGMNHLREN 131
Query: 647 SIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            IVH ++KP NI+     D   V KL+DFG +R L  +E               GT  Y+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSLYGTEEYL 182
Query: 703 DPEFLASGELTPKS--------DVYSFGIILLRLLTG----RPALG--ITKEVQYALDTG 748
            P+      L            D++S G+      TG    RP  G    KEV Y + TG
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 749 K 749
           K
Sbjct: 243 K 243

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 122
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 123 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 173
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 122
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 123 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 173
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 202
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 202
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTLVG 590
           +G+G   ++++G  RH +     AIK+ +  S   P + Q +E ++L K+ H N+V L  
Sbjct: 17  LGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 591 ACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
              E  T    L+ E+ P GSL   L    N+  L  ++   I   L  V+  ++  + +
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP-ESEFLIV--LRDVVGGMNHLREN 131
Query: 647 SIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            IVH ++KP NI+     D   V KL+DFG +R L  +E               GT  Y+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVXLYGTEEYL 182
Query: 703 DPEFLASGEL--------TPKSDVYSFGIILLRLLTG----RPALG--ITKEVQYALDTG 748
            P+      L            D++S G+      TG    RP  G    KEV Y + TG
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 749 K 749
           K
Sbjct: 243 K 243

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L        LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 202
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAI+ + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 48/218 (22%)
Query: 569 EFQQEIDILSKIRHPNLVT---LVGACPEVWTLVYEYLPNGS----------LEDRLSCK 615
           +F+ E+ I++ I++   +T   ++    EV+ ++YEY+ N S          L+   +C 
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVY-IIYEYMENDSILKFDEYFFVLDKNYTC- 146
Query: 616 DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
                +  Q    I   + +   ++H+ K  +I H D+KP+NIL+D N   KLSDFG S 
Sbjct: 147 ----FIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA--SGELTPKSDVYSFGIILLRLLTGRP 733
           ++   +I             +GT+ +M PEF +  S     K D++S GI L  +     
Sbjct: 201 YMVDKKIKG----------SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
Query: 734 ALGI------------TKEVQYALDTGKLKNLLDPLAG 759
              +            TK ++Y LD     + L PL  
Sbjct: 251 PFSLKISLVELFNNIRTKNIEYPLDRN---HFLYPLTN 285

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 202
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 149
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 204
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 30/235 (12%)
Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHS 563
            ++S +P ++ D S    +  +  F+   ++G G    +Y+   +  Q   A+K+L    
Sbjct: 33  GTASLVPDYWIDGS--NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--K 88
Query: 564 LQGPSEFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPL 621
                  + EI +L ++ HPN++ L  +   P   +LV E +  G L DR+  K      
Sbjct: 89  TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---Y 145
Query: 622 SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-----DANFVSKLSDFGISRF 676
           S +       ++   + +LH    + IVH DLKP N+L      DA    K++DFG+S+ 
Sbjct: 146 SERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPL--KIADFGLSKI 200
Query: 677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           +    +     T+C      GT  Y  PE L      P+ D++S GII   LL G
Sbjct: 201 VEHQVLMK---TVC------GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 99  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 155
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 210
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIF 236

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 147
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 202
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 524 EGATHNFDPSLKIGEGGYGSIYK------GLLRHMQVAIKMLHPHSLQGPS--EFQQEID 575
           E     +D   ++G G +  + K      GL    +   K     S +G S  + ++E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 576 ILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           IL +I+HPN++TL  V        L+ E +  G L D L+ K++   L+ +       ++
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQI 123
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEISSNNTTL 689
            + + +LHS +   I H DLKP NI LLD N      K+ DFG++     ++I   N   
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEF- 174
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
               +  GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 222
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 26/228 (11%)
Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ- 572
           S+F  +     + N+D   ++G+G +  + + + +   ++ A K+++   L    +FQ+ 
Sbjct: 17  SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKL 75
Query: 573 --EIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
             E  I  K++HPN+V L  +  E     LV++ +  G L + +  ++      + +   
Sbjct: 76  EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE------FYSEAD 129
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSN 685
            +  +  +L  +  C  + IVH +LKP N+LL +       KL+DFG++  ++ +E    
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 189
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                      GT  Y+ PE L     +   D+++ G+IL  LL G P
Sbjct: 190 FA---------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 539 GGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILS--KIRHPNLVTLVGACP--- 593
           G +G ++K  L +  VA+K+     +Q    +Q E ++ S   ++H N++  +GA     
Sbjct: 35  GRFGCVWKAQLLNEYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 594 ----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH--- 646
               ++W L+  +   GSL D L     +  +SW     IA  +   L +LH   P    
Sbjct: 92  SVDVDLW-LITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 647 ----SIVHGDLKPANILLDANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPKGTFAY 701
               +I H D+K  N+LL  N  + ++DFG++ +F +       +  +       GT  Y
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-------GTRRY 199
Query: 702 MDPEFLASG-----ELTPKSDVYSFGIILLRL 728
           M PE L        +   + D+Y+ G++L  L
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAIK++        S          + EI+IL K+ H
Sbjct: 15  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 75  PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GNKRLKEATCKLYFYQMLL 125
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +   +S   TLC     
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLC----- 177
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 178 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAIK++        S          + EI+IL K+ H
Sbjct: 15  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 75  PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GNKRLKEATCKLYFYQMLL 125
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +   +S   TLC     
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLC----- 177
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 178 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 26  DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 84  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 139
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 140 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 187
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG 736
           YM PE L     + +SD++S G+ L+ +  GR  +G
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 151
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T      +   T  Y  PE + + 
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--XEXVATRWYRAPEIMLNS 206
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      L  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 96  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 152
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T      +   T  Y  PE + + 
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--XEXVATRWYRAPEIMLNS 207
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIF 233

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAIK++        S          + EI+IL K+ H
Sbjct: 14  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 74  PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GNKRLKEATCKLYFYQMLL 124
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +   +S   TLC     
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLC----- 176
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 177 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 216

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 539 GGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP--- 593
           G +G ++K  L +  VA+K+     LQ    +Q E +I S   ++H NL+  + A     
Sbjct: 26  GRFGCVWKAQLMNDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 594 ----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH--- 646
               E+W L+  +   GSL D L  K N   ++W     +A  +   L +LH   P    
Sbjct: 83  NLEVELW-LITAFHDKGSLTDYL--KGNI--ITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 647 -----SIVHGDLKPANILLDANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPKGTFA 700
                SI H D K  N+LL ++  + L+DFG++ RF         +  +       GT  
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-------GTRR 190
Query: 701 YMDPEFLASG-----ELTPKSDVYSFGIILLRLLT 730
           YM PE L        +   + D+Y+ G++L  L++
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 38/218 (17%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRHPNL 585
           +G G  G +     R    +VAIK++        S          + EI+IL K+ HP +
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 586 VTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLH 641
           + +      E + +V E +  G L D++             R++ AT       +L+ + 
Sbjct: 78  IKIKNFFDAEDYYIVLELMEGGELFDKVV---------GNKRLKEATCKLYFYQMLLAVQ 128
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               + I+H DLKP N+LL +   + + K++DFG S+ L +   +S   TLC      GT
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLC------GT 179
Query: 699 FAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
             Y+ PE L S          D +S G+IL   L+G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 46/248 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +F+    +G+G +G + K    L     AIK +  H+ +  S    E+ +L+ + H  +V
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 587 TLVGACPEVWTLV---------------YEYLPNGSLEDRLSCKDNSPPLS--WQTRIRI 629
               A  E    V                EY  NG+L D +  ++ +      W    R+
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RL 121
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL----------SQ 679
             ++   L ++HS     I+H DLKP NI +D +   K+ DFG+++ +          SQ
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLL----TGRPA 734
           N   S++      T   GT  Y+  E L  +G    K D+YS GII   ++    TG   
Sbjct: 179 NLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER 234
Query: 735 LGITKEVQ 742
           + I K+++
Sbjct: 235 VNILKKLR 242

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 528 HNFDPSLKIGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSK 579
           +N      +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 580 I-RHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDN-----------SPPLSWQT 625
           + +H N+V L+GAC       ++ EY   G L + L  K             +  LS + 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
            +  ++++   + FL S    + +H D+   N+LL    V+K+ DFG++R +       N
Sbjct: 166 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MN 216
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           ++    + + +    +M PE +     T +SDV+S+GI+L  + +
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAIK++        S          + EI+IL K+ H
Sbjct: 21  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 81  PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GNKRLKEATCKLYFYQMLL 131
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +   +S   TLC     
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLC----- 183
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 184 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 223

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ HPN++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANF---VSKLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 40/231 (17%)
Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQ 571
           SDF F ++            IG+G +G +   L RH    +  A+K+L   ++    E +
Sbjct: 38  SDFHFLKV------------IGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEK 83
Query: 572 QEID----ILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQT 625
             +     +L  ++HP LV L  +    +    V +Y+  G L   L  +        + 
Sbjct: 84  HIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEP 139
Query: 626 RIRI-ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
           R R  A E+ S L +LHS    +IV+ DLKP NILLD+     L+DFG+ +     E +S
Sbjct: 140 RARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNS 194
Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             +T C      GT  Y+ PE L         D +  G +L  +L G P  
Sbjct: 195 TTSTFC------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL   RH N++ +  + 
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 149
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 204
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLS----CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +G C  E W LV E    G L   L      KD       +  I +  ++   + +L   
Sbjct: 94  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-------KNIIELVHQVSMGMKYLEES 146
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYA 198
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
           PE +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 247

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLS----CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +G C  E W LV E    G L   L      KD       +  I +  ++   + +L   
Sbjct: 94  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-------KNIIELVHQVSMGMKYLEES 146
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYA 198
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
           PE +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 247

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLV- 589
           KIG+G +G ++K   R    +VA+K +L  +  +G P    +EI IL  ++H N+V L+ 
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 590 ---------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                      C     LV+++  +   G L + L         +     R+   L + L
Sbjct: 85  ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGL 138
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            ++H  K   I+H D+K AN+L+  + V KL+DFG++R  S  + S  N       +   
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY----XNRVV 191
Query: 698 TFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYAL 745
           T  Y  PE  L   +  P  D++  G I+  + T  P + G T++ Q AL
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ--------QEIDILSKIRHPNL 585
           +GEG + ++YK   ++    VAIK +    L   SE +        +EI +L ++ HPN+
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 586 VTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           + L+ A       +LV++++    LE  +  KDNS  L   T   I   +   L  L   
Sbjct: 75  IGLLDAFGHKSNISLVFDFMET-DLE--VIIKDNSLVL---TPSHIKAYMLMTLQGLEYL 128
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTDPKGTFAYM 702
             H I+H DLKP N+LLD N V KL+DFG+++ F S N    +            T  Y 
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV---------TRWYR 179
Query: 703 DPEFLASGELTPKS-DVYSFGIILLRLLTGRPAL 735
            PE L    +     D+++ G IL  LL   P L
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFL 213

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLV- 589
           KIG+G +G ++K   R    +VA+K +L  +  +G P    +EI IL  ++H N+V L+ 
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 590 ---------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                      C     LV+++  +   G L + L         +     R+   L + L
Sbjct: 85  ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGL 138
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            ++H  K   I+H D+K AN+L+  + V KL+DFG++R  S  + S  N       +   
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY----XNRVV 191
Query: 698 TFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYAL 745
           T  Y  PE  L   +  P  D++  G I+  + T  P + G T++ Q AL
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +R  +VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
               +  +   Y+    +E  L     S  LS         ++   L ++HS    +++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+L++     K+ DFG++R         ++T     T+   T  Y  PE + + 
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEH---DHTGFL--TEXVATRWYRAPEIMLNS 222
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL   RH N++ +  + 
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   Y+    +E  L     +  LS         ++   L ++HS    +++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 149
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 204
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP 583
           N+D   ++G+G +  + + + +   ++ A K+++   L    +FQ+   E  I  K++HP
Sbjct: 6   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHP 64
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N+V L  +  E     LV++ +  G L + +  ++      + +    +  +  +L  + 
Sbjct: 65  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIA 118
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            C  + IVH +LKP N+LL +       KL+DFG++  ++ +E               GT
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---------GT 169
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             Y+ PE L     +   D+++ G+IL  LL G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 204

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 32  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLS----CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +G C  E W LV E    G L   L      KD       +  I +  ++   + +L   
Sbjct: 92  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-------KNIIELVHQVSMGMKYLEES 144
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  
Sbjct: 145 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYA 196
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
           PE +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 245

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 41/278 (14%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLV 586
           +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S + +H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 587 TLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRIRI 629
            L+GAC       ++ EY   G L + L  K   PP               LS +  +  
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRK--RPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           ++++   + FL S    + +H D+   N+LL    V+K+ DFG++R +       N++  
Sbjct: 172 SSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNY 222
Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 749
             + + +    +M PE +     T +SDV+S+GI+L  + +    LG+       +++  
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKF 278
Query: 750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
            K + D      P    + + ++   C  +    RP  
Sbjct: 279 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 316

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ---VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D   ++G G +G +++   R       A  ++ PH     +  ++EI  +S +RHP L
Sbjct: 52  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTL 110
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V L  A  +     ++YE++  G L ++++ + N   +S    +    ++C  L  +H  
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHE- 167
Query: 644 KPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             ++ VH DLKP NI+      +  KL DFG++  L   + S   TT        GT  +
Sbjct: 168 --NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTT--------GTAEF 216
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG 736
             PE      +   +D++S G++   LL+G    G
Sbjct: 217 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 251

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 535 KIGEGGYGSIYKG---LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG   + + ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +      +  I +  ++   + +L      +
Sbjct: 84  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES---N 137
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE +
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECI 192
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 56/293 (19%)
Query: 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM---------QVAIKMLHPHSLQGPSEF 570
           F +I      F+ SL  G+G +  I+KG+ R +         +V +K+L          F
Sbjct: 2   FHKIRNEDLIFNESL--GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 571 QQEIDILSKIRHPNLVTLVG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
            +   ++SK+ H +LV   G   C +   LV E++  GSL+  L    N   + W  ++ 
Sbjct: 60  FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLE 117
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILL---------DANFVSKLSDFGISRFLSQ 679
           +A +L + + FL     ++++HG++   NILL         +  F+ KLSD GIS     
Sbjct: 118 VAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGIS----- 168
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTG--RP--A 734
                   T+  +   +    ++ PE + +   L   +D +SFG  L  + +G  +P  A
Sbjct: 169 -------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221
Query: 735 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
           L   +++Q+  D  +L           P  +A +LANL   C +     RP  
Sbjct: 222 LDSQRKLQFYEDRHQL-----------PAPKAAELANLINNCMDYEPDHRPSF 263

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP 583
           N+D   ++G+G +  + + + +   ++ A K+++   L    +FQ+   E  I  K++HP
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHP 65
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N+V L  +  E     LV++ +  G L + +  ++      + +    +  +  +L  + 
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIA 119
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            C  + IVH +LKP N+LL +       KL+DFG++  ++ +E               GT
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---------GT 170
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             Y+ PE L     +   D+++ G+IL  LL G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLV- 589
           KIG+G +G ++K   R    +VA+K +L  +  +G P    +EI IL  ++H N+V L+ 
Sbjct: 24  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 590 ---------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                      C     LV+++  +   G L + L         +     R+   L + L
Sbjct: 84  ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGL 137
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            ++H  K   I+H D+K AN+L+  + V KL+DFG++R  S  + S  N       +   
Sbjct: 138 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY----XNRVV 190
Query: 698 TFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYAL 745
           T  Y  PE  L   +  P  D++  G I+  + T  P + G T++ Q AL
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +      +  I +  ++   + +L      +
Sbjct: 78  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES---N 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NXYKAQTHGKWPVKWYAPECI 186
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 231

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ---VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
           ++D   ++G G +G +++   R       A  ++ PH     +  ++EI  +S +RHP L
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTL 216
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V L  A  +     ++YE++  G L ++++ + N   +S    +    ++C  L  +H  
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHE- 273
Query: 644 KPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
             ++ VH DLKP NI+      +  KL DFG++  L   + S   TT        GT  +
Sbjct: 274 --NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTT--------GTAEF 322
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG 736
             PE      +   +D++S G++   LL+G    G
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 357

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLV- 589
           KIG+G +G ++K   R    +VA+K +L  +  +G P    +EI IL  ++H N+V L+ 
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 590 ---------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                      C     LV+++  +   G L + L         +     R+   L + L
Sbjct: 85  ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGL 138
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            ++H  K   I+H D+K AN+L+  + V KL+DFG++R  S  + S  N       +   
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY----XNRVV 191
Query: 698 TFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYAL 745
           T  Y  PE  L   +  P  D++  G I+  + T  P + G T++ Q AL
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 535 KIGEGGYGSIYKG---LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG   + + ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 12  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +      +  I +  ++   + +L      +
Sbjct: 72  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES---N 125
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE +
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECI 180
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 225

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 535 KIGEGG--YGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+GEGG  Y  + +GL      A+K +  H  Q   E Q+E D+     HPN++ LV  C
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 593 -------PEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                   E W L+  +   G+L + +   KD    L+    + +   +C  L  +H+  
Sbjct: 96  LRERGAKHEAWLLL-PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFG-ISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                H DLKP NILL       L D G +++     E S    TL      + T +Y  
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 704 PEFLASGE---LTPKSDVYSFGIILLRLLTG 731
           PE  +      +  ++DV+S G +L  ++ G
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 528 HNFDPSLKIGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSK 579
           +N      +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S 
Sbjct: 31  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 580 I-RHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLS--------------------CKD 616
           + +H N+V L+GAC       ++ EY   G L + L                      K+
Sbjct: 91  LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 676
           +  PL  +  +  ++++   + FL S    + +H D+   N+LL    V+K+ DFG++R 
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           +       N++    + + +    +M PE +     T +SDV+S+GI+L  + +
Sbjct: 208 I------MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 535 KIGEGGYGSIYKG---LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG   + + ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +      +  I +  ++   + +L      +
Sbjct: 74  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES---N 127
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECI 182
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 227

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--VG 590
           IGEG YG +      +  ++VAIK + P   Q   +   +EI IL + RH N++ +  + 
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P +  +   YL    +   L     +  LS         ++   L ++HS    +++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLH 167
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP+N+LL+     K+ DFG++R    +    ++T     T+   T  Y  PE + + 
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDH---DHTGFL--TEYVATRWYRAPEIMLNS 222
Query: 711 ELTPKS-DVYSFGIILLRLLTGRPAL 735
           +   KS D++S G IL  +L+ RP  
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 34  DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 92  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 147
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 148 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 195
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +      +  I +  ++   + +L      +
Sbjct: 78  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES---N 131
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  PE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECI 186
Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 231

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 536 IGEGGYGSIYKG-LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
           IG G +G +++  L+   +VAIK +    LQ      +E+ I+  ++HPN+V L      
Sbjct: 48  IGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYS 103
Query: 593 -----PEVW-TLVYEYLPNGSLE---DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                 EV+  LV EY+P             K   P L  +  +    +L   L ++HS 
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLRSLAYIHSI 160
Query: 644 KPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD  + V KL DFG ++ L   E   N + +C R        Y 
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSR-------YYR 208
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRP 733
            PE +  +   T   D++S G ++  L+ G+P
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQP 240

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP 583
           N+D   ++G+G +  + + + +   ++ A K+++   L    +FQ+   E  I  K++HP
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHP 65
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N+V L  +  E     LV++ +  G L + +  ++      + +    +  +  +L  + 
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIA 119
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            C  + IVH +LKP N+LL +       KL+DFG++  ++ +E               GT
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---------GT 170
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             Y+ PE L     +   D+++ G+IL  LL G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLS----CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +G C  E W LV E    G L   L      KD       +  I +  ++   + +L   
Sbjct: 436 IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-------KNIIELVHQVSMGMKYLEES 488
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  
Sbjct: 489 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYA 540
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
           PE +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 589

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 10  DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 68  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 123
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L  +E+++            GT +
Sbjct: 124 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFV---------GTRS 171
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTG---RPALGITKEVQYALD 746
           YM PE L     + +SD++S G+ L+ +  G   RP + I + + Y ++
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN 220

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +    ++     +  +    P+   E   E +++ ++ +P +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLS----CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           +G C  E W LV E    G L   L      KD       +  I +  ++   + +L   
Sbjct: 437 IGICEAESWMLVMEMAELGPLNKYLQQNRHVKD-------KNIIELVHQVSMGMKYLEES 489
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              + VH DL   N+LL     +K+SDFG+S+ L  +E          +T  K    +  
Sbjct: 490 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-----NYYKAQTHGKWPVKWYA 541
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
           PE +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G+
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 590

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 528 HNFDPSLKIGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSK 579
           +N      +G G +G + +    GL +    ++VA+KML   +     E    E+ I+S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 580 I-RHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCK----DNSPPL-------SWQT 625
           + +H N+V L+GAC       ++ EY   G L + L  K    +  P         S + 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
            +  ++++   + FL S    + +H D+   N+LL    V+K+ DFG++R +       N
Sbjct: 166 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MN 216
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           ++    + + +    +M PE +     T +SDV+S+GI+L  + +
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    IG G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTIGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     K
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIK 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VADFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    IG G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTIGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     K
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIK 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VADFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAI+++        S          + EI+IL K+ H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 200 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG---------NKRLKEATCKLYFYQMLL 250
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +  +     TLC     
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---TLC----- 302
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 303 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 69  DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 127 YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 182
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 183 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 230
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 56/230 (24%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV 595
           IG GG+G ++K   +H       +         + ++E+  L+K+ H N+V   G     
Sbjct: 20  IGSGGFGQVFKA--KHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC---- 73
Query: 596 WTLVYEYLPNGSLEDRLSCKDNSPPLS-------------------------WQTRIR-- 628
           W   ++Y P  S +D L   D  P  S                         W  + R  
Sbjct: 74  WD-GFDYDPETS-DDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 629 -----IATELCSVLI----FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 679
                +A EL   +     ++HS K   ++H DLKP+NI L      K+ DFG+   L  
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           +           RT  KGT  YM PE ++S +   + D+Y+ G+IL  LL
Sbjct: 189 D---------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 533 SLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPS--------EFQQEIDILSKIRH 582
           S  +G G  G +     R    +VAI+++        S          + EI+IL K+ H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 583 PNLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLI 638
           P ++ +      E + +V E +  G L D++             R++ AT       +L+
Sbjct: 214 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG---------NKRLKEATCKLYFYQMLL 264
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            +     + I+H DLKP N+LL +   + + K++DFG S+ L +  +     TLC     
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---TLC----- 316
Query: 696 KGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
            GT  Y+ PE L S          D +S G+IL   L+G P
Sbjct: 317 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 356

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    IG G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTIGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     K
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIK 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VADFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 529 NFDPSLKIGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           NF+    +G G YG ++          G L  M+V  K       +     + E  +L  
Sbjct: 55  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 580 IRH-PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           IR  P LVTL  A        L+ +Y+  G L   LS ++       Q  +    E+   
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV---GEIVLA 171
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LH      I++ D+K  NILLD+N    L+DFG+S+    +E +      C      
Sbjct: 172 LEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFC------ 221
Query: 697 GTFAYMDPEFLASGELTPKS--DVYSFGIILLRLLTG 731
           GT  YM P+ +  G+       D +S G+++  LLTG
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +     TLC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VTDFGFAK-----RVKGRTWTLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 7   DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 65  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 168
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 56/293 (19%)
Query: 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM---------QVAIKMLHPHSLQGPSEF 570
           F +I      F+ SL  G+G +  I+KG+ R +         +V +K+L          F
Sbjct: 2   FHKIRNEDLIFNESL--GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 571 QQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
            +   ++SK+ H +LV   G   C +   LV E++  GSL+  L    N   + W  ++ 
Sbjct: 60  FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLE 117
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILL---------DANFVSKLSDFGISRFLSQ 679
           +A +L   + FL     ++++HG++   NILL         +  F+ KLSD GIS     
Sbjct: 118 VAKQLAWAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGIS----- 168
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTG--RP--A 734
                   T+  +   +    ++ PE + +   L   +D +SFG  L  + +G  +P  A
Sbjct: 169 -------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221
Query: 735 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
           L   +++Q+  D  +L           P  +A +LANL   C +     RP  
Sbjct: 222 LDSQRKLQFYEDRHQL-----------PAPKAAELANLINNCMDYEPDHRPSF 263

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 7   DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 65  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 168
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 7   DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 65  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 168
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 7   DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 65  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 168
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
           +F+   ++G G  G ++K  + H    + +A K++H        ++  +E+ +L +   P
Sbjct: 7   DFEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            +V   GA     E+ ++  E++  GSL+  L      P    Q   +++  +   L +L
Sbjct: 65  YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYL 120
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +        GT +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV------GTRS 168
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           YM PE L     + +SD++S G+ L+ +  GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 13  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 54
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 55  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 114
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 115 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 167
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +     TLC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 168 VTDFGFAK-----RVKGRTWTLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 217 MAAGYPPFFADQPIQ 231

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQG +   +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQG +   +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +F+    +G+G +G + K    L     AIK +  H+ +  S    E+ +L+ + H  +V
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 587 TLVGACPEVWTLV---------------YEYLPNGSLEDRLSCKDNSPPLS--WQTRIRI 629
               A  E    V                EY  N +L D +  ++ +      W    R+
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL----------SQ 679
             ++   L ++HS     I+H DLKP NI +D +   K+ DFG+++ +          SQ
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLL----TGRPA 734
           N   S++      T   GT  Y+  E L  +G    K D+YS GII   ++    TG   
Sbjct: 179 NLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER 234
Query: 735 LGITKEVQ 742
           + I K+++
Sbjct: 235 VNILKKLR 242

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQG +   +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    E +  ++   IL  +  P LV L  +  +   L  V EY P G +
Sbjct: 69  YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     K
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG+++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGLAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 23/176 (13%)
Query: 565 QGPSE-FQQEIDILSKIRHPNLVTLVGACPEV----WTLVYEYLPNGSLEDRLSCKDNSP 619
           +GP E   QEI IL K+ HPN+V LV    +       +V+E +  G + +  + K    
Sbjct: 77  RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---- 132
Query: 620 PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 679
           PLS         +L   + +LH  K   I+H D+KP+N+L+  +   K++DFG+S     
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS----- 184
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKS-DVYSFGIILLRLLTGR 732
           NE   ++  L   ++  GT A+M PE L+      + K+ DV++ G+ L   + G+
Sbjct: 185 NEFKGSDALL---SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 33  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 93  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 146
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 200
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 246

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ H N++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANFVS---KLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 84  LGICLTSTVQLIMQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 137
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 191
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 85  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 138
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 192
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 86  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 139
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 193
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 84  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 137
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 191
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 29/244 (11%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNLVTLVG 590
           K+GEG YG +YK +  + +  VAIK +   H  +G P    +E+ +L +++H N++ L  
Sbjct: 41  KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                    L++EY  N    D     D +P +S +       +L + + F HS +    
Sbjct: 101 VIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---C 153
Query: 649 VHGDLKPANILLDANFVS-----KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           +H DLKP N+LL  +  S     K+ DFG++R        +    +   T    T  Y  
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--------AFGIPIRQFTHEIITLWYRP 205
Query: 704 PE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
           PE  L S   +   D++S   I   +L   P      E+       ++  L D     WP
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT--WP 263
Query: 763 FVQA 766
            V A
Sbjct: 264 GVTA 267

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEI----EGATHNFDP 532
           Y+++  ELQ  + +      +L K R     + + P +      S I    E    N   
Sbjct: 2   YRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITL 61
Query: 533 SLKIGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPN 584
              +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N
Sbjct: 62  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 121
Query: 585 LVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLI 638
           +V  +G   +     ++ E +  G L+  L      P     L+    + +A ++     
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +L     +  +H D+   N LL       V+K+ DFG++R + +   +S      C   P
Sbjct: 182 YLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---ASYYRKGGCAMLP 235
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
                +M PE    G  T K+D +SFG++L  + +
Sbjct: 236 ---VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 87  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 140
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 194
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 86  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 139
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 193
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 86  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 139
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 193
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 40/274 (14%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL 588
           +G+G +GS+ +  L+      ++VA+KML    +      EF +E   + +  HP++  L
Sbjct: 31  LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 589 VGACPE--------VWTLVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
           VG            +  ++  ++ +G L   L      +N   L  QT +R   ++   +
Sbjct: 91  VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L S    + +H DL   N +L  +    ++DFG+SR +   +        C    P  
Sbjct: 151 EYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG---CASKLP-- 202
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE--VQYALDTGKLKNL 753
              ++  E LA    T  SDV++FG+ +  ++T    P  GI       Y +   +LK  
Sbjct: 203 -VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ- 260
Query: 754 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 787
                   P    E++ +L  +C     K RP  
Sbjct: 261 --------PPECMEEVYDLMYQCWSADPKQRPSF 286

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ H N++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANF---VSKLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 86  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 139
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 193
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ H N++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANF---VSKLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 49/276 (17%)
Query: 571 QQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           ++EI IL+  RH N++ L  +    E   +++E++    + +R++   ++  L+ +  + 
Sbjct: 49  KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT--SAFELNEREIVS 106
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNN 686
              ++C  L FLHS   H+I H D++P NI+      S  K+ +FG +R L       +N
Sbjct: 107 YVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK----PGDN 159
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE----- 740
             L   T P+    Y  PE      ++  +D++S G ++  LL+G  P L  T +     
Sbjct: 160 FRLLF-TAPE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214
Query: 741 ---VQYALDTGKLKNLL----------------------DPLAGDWPFVQAEQLANLAMR 775
               +Y  D    K +                       + L   W   + E+++   +R
Sbjct: 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIR 274
Query: 776 CCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLG 811
             +  R     + KD+  V+   R SCGG+   + G
Sbjct: 275 TLKHRRYYHTLIKKDLNMVVSAARISCGGAIRSQKG 310

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 29  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 89  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 142
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 196
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 242

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 90  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 143
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 197
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 85  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 138
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 192
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLITQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 40/231 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGA-- 591
           +G+G YG +++G  +   VA+K+    S +    + +E ++ + +  RH N++  + +  
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 592 -----CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH----- 641
                  ++W L+  Y   GSL D L        L   + +RI   + S L  LH     
Sbjct: 73  TSRHSSTQLW-LITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 642 -SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ--NEISSNNTTLCCRTDPK-G 697
              KP +I H DLK  NIL+  N    ++D G++   SQ  N++   N       +P+ G
Sbjct: 128 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-------NPRVG 179
Query: 698 TFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           T  YM PE L         +   + D+++FG++L  +     + GI ++ +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ H N++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANF---VSKLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 40/231 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGA-- 591
           +G+G YG +++G  +   VA+K+    S +    + +E ++ + +  RH N++  + +  
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 592 -----CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH----- 641
                  ++W L+  Y   GSL D L        L   + +RI   + S L  LH     
Sbjct: 73  TSRHSSTQLW-LITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 642 -SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ--NEISSNNTTLCCRTDPK-G 697
              KP +I H DLK  NIL+  N    ++D G++   SQ  N++   N       +P+ G
Sbjct: 128 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-------NPRVG 179
Query: 698 TFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           T  YM PE L         +   + D+++FG++L  +     + GI ++ +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 77  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 130
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 184
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 230

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 569 EFQQEIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           E ++E+ IL ++ H N++TL  V        L+ E +  G L D L+ K++   LS +  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANI-LLDANF---VSKLSDFGISRFLSQNEI 682
                ++   + +LH+ K   I H DLKP NI LLD N      KL DFG++  + ++ +
Sbjct: 118 TSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGV 173
Query: 683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKE 740
              N          GT  ++ PE +    L  ++D++S G+I   LL+G  P LG TK+
Sbjct: 174 EFKNIF--------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 572 QEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
           +E+ +L +   P +V   GA     E+ ++  E++  GSL+  L      P    +   +
Sbjct: 63  RELQVLHECNSPYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKEAKRIPE---EILGK 118
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           ++  +   L +L   + H I+H D+KP+NIL+++    KL DFG+S  L    I S   +
Sbjct: 119 VSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANS 172
Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                   GT +YM PE L     + +SD++S G+ L+ L  GR
Sbjct: 173 FV------GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 48  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 108 LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 161
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 215
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 261

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    E +  ++   IL  +  P LV L  +  +   L  V EY P G +
Sbjct: 69  YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG+++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGLAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPH-SLQGPSEFQQEIDI- 576
            E    + +P +++G G YG + K  +RH+     +A+K +    + Q       ++DI 
Sbjct: 46  FEVKADDLEPIMELGRGAYGVVEK--MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 577 LSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           +  +  P  VT  GA     +VW +  E +     +      D    +      +IA  +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVW-ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
              L  LHS    S++H D+KP+N+L++A    K+ DFGIS +L    + S   T+    
Sbjct: 163 VKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDAGC 216
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            P      ++PE    G  + KSD++S GI ++ L   R
Sbjct: 217 KPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILR 254

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           KIGEG YG +YK    + +  A+K   L       PS   +EI IL +++H N+V L  V
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   LV+E+L +  L+  L   +          +   + L  +L  +  C    ++
Sbjct: 69  IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL-A 708
           H DLKP N+L++     K++DFG++R        +    +   T    T  Y  P+ L  
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--------AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           S + +   D++S G I   ++ G P      E    +   ++  L  P + +WP V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI--LGTPNSKNWPNV 228

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 20  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 80  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAEGMNYLED---R 133
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 187
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 233

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           KIGEG YG +YK    + +  A+K   L       PS   +EI IL +++H N+V L  V
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   LV+E+L +  L+  L   +          +   + L  +L  +  C    ++
Sbjct: 69  IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL-A 708
           H DLKP N+L++     K++DFG++R        +    +   T    T  Y  P+ L  
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--------AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           S + +   D++S G I   ++ G P      E    +   ++  L  P + +WP V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRI--LGTPNSKNWPNV 228

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           KIGEG YG +YK    + +  A+K   L       PS   +EI IL +++H N+V L  V
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   LV+E+L +  L+  L   +          +   + L  +L  +  C    ++
Sbjct: 69  IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL-A 708
           H DLKP N+L++     K++DFG++R        +    +   T    T  Y  P+ L  
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--------AFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           S + +   D++S G I   ++ G P      E    +   ++  L  P + +WP V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI--LGTPNSKNWPNV 228

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     K
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 40/231 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGA-- 591
           +G+G YG +++G  +   VA+K+    S +    + +E ++ + +  RH N++  + +  
Sbjct: 45  VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 592 -----CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH----- 641
                  ++W L+  Y   GSL D L        L   + +RI   + S L  LH     
Sbjct: 102 TSRHSSTQLW-LITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 642 -SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ--NEISSNNTTLCCRTDPK-G 697
              KP +I H DLK  NIL+  N    ++D G++   SQ  N++   N       +P+ G
Sbjct: 157 TQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-------NPRVG 208
Query: 698 TFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           T  YM PE L         +   + D+++FG++L  +     + GI ++ +
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 259

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           + I  ++   + FLHS     ++H DLKP+NI    + V K+ DFG+   + Q+E     
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 687 TT----LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
            T            GT  YM PE +     + K D++S G+IL  LL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSN 685
           I  ++ + + FLHS   H+I H D+KP N+L    + + V KL+DFG ++  +QN + + 
Sbjct: 114 IMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT- 169
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                    P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 170 ---------PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 48/256 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
              L    +   P   +      A ++     +LHS     +++ DLKP N+L+D     
Sbjct: 129 FSHLRRIGRFXEPHARF-----YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYI 180
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           +++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++ 
Sbjct: 181 QVTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 727 RLLTGRPALGITKEVQ 742
            +  G P     + +Q
Sbjct: 230 EMAAGYPPFFADQPIQ 245

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 174
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YY 222
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL----RHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G++YKGL       +++ + ++       P   ++ +D   +++ + +P++  L
Sbjct: 57  LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 117 LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 170
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 224
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 270

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
           NF+    +G+G +G +    ++      A+K+L    +    + +    E  ILS  R+ 
Sbjct: 24  NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIF 639
             +T +  C   P+    V E++  G L   +           + R R  A E+ S L+F
Sbjct: 84  PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----EARARFYAAEIISALMF 139
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LH      I++ DLK  N+LLD     KL+DFG+ +    N +++   T C      GT 
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFC------GTP 188
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
            Y+ PE L      P  D ++ G++L  +L G
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 536 IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +   + +  ++  A K +  + ++    F+QEI+I+  + HPN++ L     
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              +++ LV E    G L +R+  K            RI  ++ S + + H     ++ H
Sbjct: 77  DNTDIY-LVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKL---NVAH 129
Query: 651 GDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N L   +      KL DFG++      ++              GT  Y+ P+ L
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---------GTPYYVSPQVL 180
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             G   P+ D +S G+++  LL G P  
Sbjct: 181 -EGLYGPECDEWSAGVMMYVLLCGYPPF 207

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 48/256 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
              L    +   P      R   A ++     +LHS     +++ DLKP N+L+D     
Sbjct: 129 FSHLRRIGRFXEP----HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYI 180
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           +++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++ 
Sbjct: 181 QVTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 727 RLLTGRPALGITKEVQ 742
            +  G P     + +Q
Sbjct: 230 EMAAGYPPFFADQPIQ 245

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 42/243 (17%)
Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQE 573
           SDF    +E           + EGG+  +Y+   +    + A+K L  +  +      QE
Sbjct: 16  SDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQE 75
Query: 574 IDILSKIR-HPNLVTLVGACP---------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSW 623
           +  + K+  HPN+V    A           +   L+   L  G L + L   ++  PLS 
Sbjct: 76  VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS--------- 674
            T ++I  + C  +  +H  KP  I+H DLK  N+LL      KL DFG +         
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY 194
Query: 675 ------RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL---ASGELTPKSDVYSFGIIL 725
                 R L + EI+ N T +           Y  PE +   ++  +  K D+++ G IL
Sbjct: 195 SWSAQRRALVEEEITRNTTPM-----------YRTPEIIDLYSNFPIGEKQDIWALGCIL 243
Query: 726 LRL 728
             L
Sbjct: 244 YLL 246

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 48/256 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 609 EDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
              L    +   P      R   A ++     +LHS     +++ DLKP N+L+D     
Sbjct: 130 FSHLRRIGRFXEP----HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYI 181
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           +++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++ 
Sbjct: 182 QVTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 727 RLLTGRPALGITKEVQ 742
            +  G P     + +Q
Sbjct: 231 EMAAGYPPFFADQPIQ 246

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSN 685
           I  ++ + + FLHS   H+I H D+KP N+L    + + V KL+DFG ++  +QN + + 
Sbjct: 133 IMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT- 188
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                    P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 189 ---------PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 178
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 285
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 286 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 318

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +GEG +GS+ +G L+      ++VA+K   L   S +   EF  E   +    HPN++ L
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 589 VGACPEVWT-------LVYEYLPNGSLE-----DRLSCKDNSPPLSWQTRIRIATELCSV 636
           +G C E+ +       ++  ++  G L       RL       PL  QT ++   ++   
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLKFMVDIALG 159
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           + +L +    + +H DL   N +L  +    ++DFG+S+     +I S +     R   K
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSK-----KIYSGDYYRQGRI-AK 210
Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGI----ILLRLLTGRPALGITKEVQYALDTGKLK 751
               ++  E LA    T KSDV++FG+    I  R +T  P +   +   Y L   +LK
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK 269

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 96  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 152
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YY 200
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 85  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 138
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 192
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 176
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 177 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 224
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 168
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 169 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 216
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L   +S Q   +F  E  I+SK  H N+V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +   +S      C   P   
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---ASYYRKGGCAMLP--- 223
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 60  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 609 EDRLSCKDN---------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659
              L  K N            L+ +  I  + ++   + FL S K    +H DL   NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARNIL 176
Query: 660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVY 719
           L    V K+ DFG++R + +      +     + D +    +M PE +     T +SDV+
Sbjct: 177 LSEKNVVKIXDFGLARDIYK------DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 720 SFGIILLRLL----TGRPALGITKEVQYALDTG 748
           SFG++L  +     +  P + I +E    L  G
Sbjct: 231 SFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEG 263

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 87  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 140
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 194
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 174
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 222
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 85  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 138
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 192
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 609 EDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
              L    +   P      R   A ++     +LHS     +++ DLKP N+++D     
Sbjct: 129 FSHLRRIGRFXEP----HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYI 180
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++ 
Sbjct: 181 KVTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 727 RLLTGRPALGITKEVQ 742
            +  G P     + +Q
Sbjct: 230 EMAAGYPPFFADQPIQ 245

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 536 IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +   + +  ++  A K +  + ++    F+QEI+I+  + HPN++ L     
Sbjct: 34  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              +++ LV E    G L +R+  K            RI  ++ S + + H     ++ H
Sbjct: 94  DNTDIY-LVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKL---NVAH 146
Query: 651 GDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N L   +      KL DFG++      ++              GT  Y+ P+ L
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---------GTPYYVSPQVL 197
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             G   P+ D +S G+++  LL G P  
Sbjct: 198 -EGLYGPECDEWSAGVMMYVLLCGYPPF 224

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 85  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 138
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 192
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 159
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 160 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YY 207
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 178
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 285
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 286 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 318

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 92  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 148
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 149 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YY 196
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 178
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 179 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 226
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 24/220 (10%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDI 576
           +I+    +F+    +G+G +G ++    +      AIK L    +    + +    E  +
Sbjct: 12  QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 577 LS-KIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATE 632
           LS    HP L  +       E    V EYL  G L   + SC  +   LS  T    A E
Sbjct: 72  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFY--AAE 127
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR 692
           +   L FLHS     IV+ DLK  NILLD +   K++DFG+ +   +N +    T   C 
Sbjct: 128 IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFC- 180
Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
               GT  Y+ PE L   +     D +SFG++L  +L G+
Sbjct: 181 ----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 219
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 220 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 267
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 96  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 152
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YY 200
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 48/249 (19%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
           +F+    +G+G +G + K    L     AIK +  H+ +  S    E+ +L+ + H  +V
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVV 65
Query: 587 TLVGACPEVWTLV---------------YEYLPNGSLEDRLSCKDNSPPLS--WQTRIRI 629
               A  E    V                EY  N +L D +  ++ +      W    R+
Sbjct: 66  RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL----------SQ 679
             ++   L ++HS     I+H +LKP NI +D +   K+ DFG+++ +          SQ
Sbjct: 122 FRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 680 N-EISSNNTTLCCRTDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLL----TGRP 733
           N   SS+N T        GT  Y+  E L  +G    K D YS GII    +    TG  
Sbjct: 179 NLPGSSDNLTSAI-----GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXE 233
Query: 734 ALGITKEVQ 742
            + I K+++
Sbjct: 234 RVNILKKLR 242

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 90  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 143
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG ++ L   E   +          K    +M  E 
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA------EGGKVPIKWMALES 197
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPH-SLQGPSEFQQEIDI- 576
           +E    + +P +++G G YG + K  +RH+     +A+K +    + Q       ++DI 
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEK--MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 59
Query: 577 LSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
           +  +  P  VT  GA     +VW +  E +     +      D    +      +IA  +
Sbjct: 60  MRTVDCPFTVTFYGALFREGDVW-ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
              L  LHS    S++H D+KP+N+L++A    K+ DFGIS +L  +   + +    C+ 
Sbjct: 119 VKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDIDAGCK- 173
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            P      ++PE    G  + KSD++S GI ++ L   R
Sbjct: 174 -PYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILR 210

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 89  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 145
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 146 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 193
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRP 733
             PE +  + + T   DV+S G +L  LL G+P
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHS 642
                  EV+  LV +Y+P     +    S    + P+ +   +++   +L   L ++HS
Sbjct: 97  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHS 153
Query: 643 CKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y
Sbjct: 154 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YY 201
Query: 702 MDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
             PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 88  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 144
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 145 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 193
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY P G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 85  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 141
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 142 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 190
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----- 588
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 589 -VGACPEV--WTLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             G   +V    LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 582 HPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLI 638
           HP L  +       E    V EYL  G L   + SC  +   LS  T    A E+   L 
Sbjct: 77  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFY--AAEIILGLQ 132
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           FLHS     IV+ DLK  NILLD +   K++DFG+ +   +N +    T   C     GT
Sbjct: 133 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFC-----GT 181
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
             Y+ PE L   +     D +SFG++L  +L G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 35  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 95  DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 150
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 151 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 257
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 258 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 290

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +   L+R        A+K+L    +    E    +    +L   
Sbjct: 8   NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 66  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 121
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T  T C     
Sbjct: 122 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFC----- 169
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 170 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +   L+R        A+K+L    +    E    +    +L   
Sbjct: 5   NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T  T C     
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFC----- 166
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P L  L  +  +   L  V EY P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     K
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 536 IGEGGYGSIYKGL------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +GEG YG + + L       R +++  K        G +  ++EI +L ++RH N++ LV
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 590 GAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
                   +   +V EY   G  E   S  +   P+          +L   L +LHS   
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY--FCQLIDGLEYLHS--- 127
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             IVH D+KP N+LL      K+S  G++  L  +  ++++T   CRT  +G+ A+  PE
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL--HPFAADDT---CRTS-QGSPAFQPPE 181
Query: 706 FLASGELT---PKSDVYSFGIILLRLLTG 731
            +A+G  T    K D++S G+ L  + TG
Sbjct: 182 -IANGLDTFSGFKVDIWSAGVTLYNITTG 209

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +  G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 90  LGICLTSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 143
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 197
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG G +G +Y+  L      VAIK +    LQ      +E+ I+ K+ H N+V L     
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 593 ------PEVW-TLVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                  EV+  LV +Y+P     +    S    + P+ +        +L   L ++HS 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS- 140
Query: 644 KPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
               I H D+KP N+LLD +  V KL DFG ++ L + E   N + +C R        Y 
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR-------YYR 189
Query: 703 DPEFL-ASGELTPKSDVYSFGIILLRLLTGRPAL 735
            PE +  + + T   DV+S G +L  LL G+P  
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P L  L  +  +   L  V EY P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+++D     K
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 16  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 76  DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 131
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 132 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 238
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 239 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 271

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +  G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 23  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 83  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 136
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 190
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +  G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  L
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C      L+ + +P G L D +   KDN   +  Q  +    ++   + +L      
Sbjct: 90  LGICLTSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGMNYLED---R 143
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DL   N+L+      K++DFG+++ L   E   +          K    +M  E 
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------EGGKVPIKWMALES 197
Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 749
           +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G+
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +   L+R        A+K+L    +    E    +    +L   
Sbjct: 5   NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T  T C     
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFC----- 166
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 62  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 609 EDRLSCKDN-----------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
              L  K N              L+ +  I  + ++   + FL S K    +H DL   N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARN 178
Query: 658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSD 717
           ILL    V K+ DFG++R + ++           + D +    +M PE +     T +SD
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 718 VYSFGIILLRLLT 730
           V+SFG++L  + +
Sbjct: 233 VWSFGVLLWEIFS 245

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK+ H N+V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 209
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSI--YKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVG 590
           IG G YG +   +  L   QVAIK + P++    +  ++   E+ IL   +H N++    
Sbjct: 62  IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIA--- 117
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIF 639
               +  ++   +P G  +      D           +S PL+ +       +L   L +
Sbjct: 118 ----IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           +HS +   ++H DLKP+N+L++ N   K+ DFG++R L     +S        T+   T 
Sbjct: 174 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSPAEHQYFMTEYVATR 226
Query: 700 AYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGR 732
            Y  PE + S  E T   D++S G I   +L  R
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 208
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           IG GG+G ++K   R       IK +  ++ +     ++E+  L+K+ H N+V   G   
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWD 74
Query: 593 -----PEVWT------------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
                PE  +            +  E+   G+LE  +  K     L     + +  ++  
Sbjct: 75  GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLALELFEQITK 133
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            + ++HS K   +++ DLKP+NI L      K+ DFG+   L  +           R   
Sbjct: 134 GVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---------RXRS 181
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           KGT  YM PE ++S +   + D+Y+ G+IL  LL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 500 KSRKEASSSSHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAI 556
           ++R     ++H P+ + D++   +E G   ++    K+G G Y  +++ +    + +V +
Sbjct: 8   RARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 67
Query: 557 KMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTL-------VGACPEVWTLVYEYLPNGSL 608
           K+L P      ++ ++EI IL  +R  PN++TL       V   P    LV+E++ N   
Sbjct: 68  KILKP---VKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTP---ALVFEHVNNTDF 121
Query: 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-K 667
           +               T   I   +  +L  L  C    I+H D+KP N+++D      +
Sbjct: 122 KQLYQT---------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 172
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILL 726
           L D+G++ F    +    N  +  R        +  PE L   ++   S D++S G +L 
Sbjct: 173 LIDWGLAEFYHPGQ--EYNVRVASR-------YFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 727 RLL 729
            ++
Sbjct: 224 SMI 226

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK+ H N+V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 223
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ---- 553
           L+K    A +++H+ QF                +    +G G +G +   L++H +    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHKETGNH 68
Query: 554 VAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 208
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 19  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 79  DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 134
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 135 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 241
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 242 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 274

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ---- 553
           L+K    A +++H+ QF                +    +G G +G +   L++H +    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHKETGNH 68
Query: 554 VAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ---- 553
           L+K    A +++H+ QF                +    +G G +G +   L++H +    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHKETGNH 68
Query: 554 VAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 69  FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 175 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 225
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 15  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 75  DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 130
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    GT  YM PE +   
Sbjct: 131 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 237
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 238 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 270

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 536 IGEGGYGSI--YKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVG 590
           IG G YG +   +  L   QVAIK + P++    +  ++   E+ IL   +H N++    
Sbjct: 63  IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIA--- 118
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIF 639
               +  ++   +P G  +      D           +S PL+ +       +L   L +
Sbjct: 119 ----IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           +HS +   ++H DLKP+N+L++ N   K+ DFG++R L     +S        T+   T 
Sbjct: 175 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSPAEHQYFMTEYVATR 227
Query: 700 AYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGR 732
            Y  PE + S  E T   D++S G I   +L  R
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 50  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             +  +   L  V EY+P G +   L      S P     R   A ++     +LHS   
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL-- 161
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+L+D     +++DFG ++      +      LC      GT  Y+ PE
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTPEYLAPE 209
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            + S       D ++ G+++  +  G P     + +Q
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 48/256 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 28  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P L  L  +  +   L  V EY P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM 129
Query: 609 EDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
              L    +   P      R   A ++     +LHS     +++ DLKP N+++D     
Sbjct: 130 FSHLRRIGRFXEP----HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYI 181
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++ 
Sbjct: 182 KVTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 727 RLLTGRPALGITKEVQ 742
            +  G P     + +Q
Sbjct: 231 EMAAGYPPFFADQPIQ 246

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++HM+    
Sbjct: 27  LKKWENPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHMETGNH 68
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+  G +
Sbjct: 69  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 182 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 231 MAAGYPPFFADQPIQ 245

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++H +    
Sbjct: 28  LKKWESPAQNTAHLDQF----------------ERIKTLGTGSFGRVM--LVKHKETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   IL  +  P LV L  +  +   L  V EY+P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     +
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VTDFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 165 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 215
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 50  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             +  +   L  V EY+P G +   L      S P     R   A ++     +LHS   
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL-- 161
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+L+D     +++DFG ++      +      LC      GT  Y+ PE
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTPEYLAPE 209
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            + S       D ++ G+++  +  G P     + +Q
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 51  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 167
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQ 221
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 222 SDVWSFGVLLWEIFS 236

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 209
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 223
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 70  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             +  +   L  V EY+P G +   L      S P     R   A ++     +LHS   
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL-- 181
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+L+D     +++DFG ++      +      LC      GT  Y+ PE
Sbjct: 182 -DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTPEYLAPE 229
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            + S       D ++ G+++  +  G P     + +Q
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 61  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 609 EDRLSCKDN------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
              L  K N      +P       L+ +  I  + ++   + FL S K    +H DL   
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAAR 177
Query: 657 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS 716
           NILL    V K+ DFG++R + ++           + D +    +M PE +     T +S
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQS 231
Query: 717 DVYSFGIILLRLLT 730
           DV+SFG++L  + +
Sbjct: 232 DVWSFGVLLWEIFS 245

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 176 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG---CAMLP--- 226
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 60  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 609 EDRLSCKDN---------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659
              L  K N            L+ +  I  + ++   + FL S K    +H DL   NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARNIL 176
Query: 660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVY 719
           L    V K+ DFG++R + +      +     + D +    +M PE +     T +SDV+
Sbjct: 177 LSEKNVVKICDFGLARDIYK------DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 720 SFGIILLRLLT 730
           SFG++L  + +
Sbjct: 231 SFGVLLWEIFS 241

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 64  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 177
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +     TLC      GT 
Sbjct: 178 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLC------GTP 223
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 150 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG---CAMLP--- 200
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHS------LQGP--SEFQQEIDILSKIRHPNL 585
           +G G +G ++  +   ++ +V +K +          ++ P   +   EI ILS++ H N+
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 586 VTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           + ++        + LV E   +GS  D  +  D  P L       I  +L S + +L   
Sbjct: 92  IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL--- 146
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           +   I+H D+K  NI++  +F  KL DFG + +L + ++     T C      GT  Y  
Sbjct: 147 RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---YTFC------GTIEYCA 197
Query: 704 PEFLASGEL-TPKSDVYSFGIILLRLL 729
           PE L       P+ +++S G+ L  L+
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLV 224

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 178
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+  +        +TT   +    G   YM PE +   
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQP------DTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 285
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 286 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 318

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG++R + +           C   P   
Sbjct: 199 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG---CAMLP--- 249
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 51  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 167
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQ 221
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 222 SDVWSFGVLLWEIFS 236

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 42  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             +  +   L  V EY+P G +   L      S P     R   A ++     +LHS   
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL-- 153
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+L+D     +++DFG ++      +      LC      GT  Y+ PE
Sbjct: 154 -DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTPEYLAPE 201
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            + S       D ++ G+++  +  G P     + +Q
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 50  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             +  +   L  V EY P G +   L      S P     R   A ++     +LHS   
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL-- 161
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+++D     K++DFG ++      +      LC      GT  Y+ PE
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLC------GTPEYLAPE 209
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            + S       D ++ G+++  +  G P     + +Q
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +     K   R+   A+K+L    +    E    +    +L   
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRY--YAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T    C     
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXFC----- 166
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +   L+R        A+K+L    +    E    +    +L   
Sbjct: 10  NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 68  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 123
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T    C     
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXFC----- 171
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 172 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 60  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 176
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQ 230
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 231 SDVWSFGVLLWEIFS 245

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 127/315 (40%), Gaps = 74/315 (23%)
Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLK--IGEGGYGSIYKGLLRHMQV--AIKMLHPH 562
           SS     +F   S  E++   H     LK  IG+G YG +   +    +   AIK+++ +
Sbjct: 8   SSGRENLYFQGGSLLELQKKYH-----LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKN 62
Query: 563 SLQ--GPSEFQQ---EIDILSKIRHPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLS-- 613
            ++   P + ++   E+ ++ K+ HPN+  L  V    +   LV E    G L D+L+  
Sbjct: 63  KIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVF 122
Query: 614 ----------------------CKDNS---------PPLSWQTRIR----IATELCSVLI 638
                                 C + +           L +  R +    I  ++ S L 
Sbjct: 123 IDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182
Query: 639 FLHSCKPHSIVHGDLKPANILLDAN--FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           +LH+     I H D+KP N L   N  F  KL DFG+S+   +     NN      T   
Sbjct: 183 YLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK----LNNGEYYGMTTKA 235
Query: 697 GTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGR---PALGITKEVQYALDTGKL- 750
           GT  ++ PE L +      PK D +S G++L  LL G    P +     +   L+  KL 
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-KLC 294
Query: 751 -----KNLLDPLAGD 760
                 N+L PLA D
Sbjct: 295 FENPNYNVLSPLARD 309

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 530 FDPSLKIGEGGYG--SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +D    IG G +G   + +  L    VA+K +           Q+EI     +RHPN+V 
Sbjct: 22  YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80
Query: 588 L--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
              V   P    ++ EY   G L +R+    N+   S         +L S + + HS + 
Sbjct: 81  FKEVILTPTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSGVSYCHSMQ- 136
Query: 646 HSIVHGDLKPANILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             I H DLK  N LLD +   +L   DFG S+  S    S   +T+       GT AY+ 
Sbjct: 137 --ICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTV-------GTPAYIA 185
Query: 704 PEFLASGELTPK-SDVYSFGIILLRLLTG 731
           PE L   E   K +DV+S G+ L  +L G
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 42/233 (18%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
           IG+G +G +    K   + M  A+K ++       +E +   +E+ I+  + HP LV L 
Sbjct: 23  IGKGSFGKVCIVQKNDTKKM-YAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-----LCSVLIFLHS 642
            +    E   +V + L  G L   L           Q  +    E     +C +++ L  
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYHL-----------QQNVHFKEETVKLFICELVMALDY 130
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            +   I+H D+KP NILLD +    ++DF I+  L +    +  TT+       GT  YM
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMA------GTKPYM 181
Query: 703 DPEFLASGELTPKS---DVYSFGIILLRLLTGRPALGI-----TKEVQYALDT 747
            PE  +S +    S   D +S G+    LL GR    I     +KE+ +  +T
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 60  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 176
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVR------KGDARLPLKWMAPETIFDRVYTIQ 230
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 231 SDVWSFGVLLWEIFS 245

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
           ++   +   L +L   + H ++H D+KP+NILLD     KL DFGIS  L  ++    + 
Sbjct: 128 KMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTP-----KSDVYSFGIILLRLLTGR 732
                    G  AYM PE +   + T      ++DV+S GI L+ L TG+
Sbjct: 186 ---------GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G+G +G +     K   R+   A+K+L    +    E    +    +L   RHP L  L
Sbjct: 156 LGKGTFGKVILVKEKATGRY--YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY   G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK- 268
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
            ++V+ DLK  N++LD +   K++DFG    L +  I    T  T C      GT  Y+ 
Sbjct: 269 -NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKTFC------GTPEYLA 317
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 51  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 167
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQ 221
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 222 SDVWSFGVLLWEIFS 236

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G+G +G +     K   R+   A+K+L    +    E    +    +L   RHP L  L
Sbjct: 159 LGKGTFGKVILVKEKATGRY--YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY   G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK- 271
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
            ++V+ DLK  N++LD +   K++DFG    L +  I    T  T C      GT  Y+ 
Sbjct: 272 -NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKTFC------GTPEYLA 320
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 51  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 167
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQ 221
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 222 SDVWSFGVLLWEIFS 236

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 62  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 178
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQ 232
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 233 SDVWSFGVLLWEIFS 247

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 60  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 176
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQ 230
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 231 SDVWSFGVLLWEIFS 245

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++ ++  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 554 VAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLVTLVGACPEV---WTLVYEYLPNGSL 608
           VA+KML   +          E+ IL  I  H N+V L+GAC +      ++ E+   G+L
Sbjct: 97  VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 609 EDRLSCKDN-------SPP------LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKP 655
              L  K N       +P       L+ +  I  + ++   + FL S K    +H DL  
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 213
Query: 656 ANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
            NILL    V K+ DFG++R + ++           + D +    +M PE +     T +
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQ 267
Query: 716 SDVYSFGIILLRLLT 730
           SDV+SFG++L  + +
Sbjct: 268 SDVWSFGVLLWEIFS 282

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC 592
           +GEG Y  +     L    + A+K++   +    S   +E++ L + + + N++ L+   
Sbjct: 21  LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 593 PE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
            +   + LV+E L  GS+   L+        + +   R+  ++ + L FLH+     I H
Sbjct: 81  EDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHT---KGIAH 134
Query: 651 GDLKPANILLDA-NFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP NIL ++   VS  K+ DF +   +  N  S    T    T P G+  YM PE +
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNN-SCTPITTPELTTPCGSAEYMAPEVV 193
Query: 708 -----ASGELTPKSDVYSFGIILLRLLTGRP 733
                 +     + D++S G++L  +L+G P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +   L+R        A+K+L    +    E    +    +L   
Sbjct: 5   NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T    C     
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXFC----- 166
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T+P
Sbjct: 130 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----TEP 177
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 178 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 528 HNFDPSLKIGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKI 580
           ++FD    +G+G +G +     K   R+   A+K+L    +    E    +    +L   
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRY--YAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 581 RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           RHP L  L  A    +    V EY   G L   LS       +  + R R    E+ S L
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDP 695
            +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T    C     
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKXFC----- 166
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            GT  Y+ PE L   +     D +  G+++  ++ GR
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  P LV L
Sbjct: 42  LGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
             +  +   L  V EY+P G +   L    +   P      R   A ++     +LHS  
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFEYLHSL- 153
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              +++ DLKP N+L+D     +++DFG ++      +      LC      GT  Y+ P
Sbjct: 154 --DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTPEYLAP 200
Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           E + S       D ++ G+++  +  G P     + +Q
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 44  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 157
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 203
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 620 PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 679
           P++ +  I  + ++   + FL S K    +H DL   NILL  N V K+ DFG++R + +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRL--LTGRPALGI 737
                 N     + D +    +M PE +     + KSDV+S+G++L  +  L G P  G+
Sbjct: 252 ------NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
Query: 738 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
                  +D      L + +    P     ++  + + C     K RP   + V
Sbjct: 306 Q------MDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 173
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 174 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 221
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 129
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 177
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 179
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 180 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 227
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 228 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
           K+G G YG +YK   +  +     A+K +    +   +   +EI +L +++HPN+++L  
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQK 85
Query: 589 ---VGACPEVWTLVYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                A  +VW L+++Y  +     ++   + K N  P+    R  + + L  +L  +H 
Sbjct: 86  VFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQ-LPRGMVKSLLYQILDGIHY 143
Query: 643 CKPHSIVHGDLKPANILLDANFVS----KLSDFGISRFLSQNEISSNNTTL--CCRTDP- 695
              + ++H DLKPANIL+          K++D G +R          N+ L      DP 
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF--------NSPLKPLADLDPV 195
Query: 696 KGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGRPALGITKE 740
             TF Y  PE L       K+ D+++ G I   LLT  P     +E
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG-----PSEFQQEIDILSKIRHPNLVTL 588
           IG+G +  + + + R    Q A+K++              + ++E  I   ++HP++V L
Sbjct: 32  IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-LCSVLIFLHSCKP 645
           +       +  +V+E++    L   +  + ++  +  +    +A+  +  +L  L  C  
Sbjct: 92  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA---VASHYMRQILEALRYCHD 148
Query: 646 HSIVHGDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           ++I+H D+KP N+LL +   S   KL DFG++  L ++ + +            GT  +M
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV--------GTPHFM 200
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLK 751
            PE +         DV+  G+IL  LL+G  P  G  + +   +  GK K
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK 250

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 129
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 177
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 536 IGEGGYGSIYKGLLRHM-------QVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +G G +G +Y+G +  M       QVA+K L    S Q   +F  E  I+SK  H N+V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 588 LVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPP----LSWQTRIRIATELCSVLIFLH 641
            +G   +     ++ E +  G L+  L      P     L+    + +A ++     +L 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 642 SCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
               +  +H D+   N LL       V+K+ DFG+++ + +           C   P   
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG---CAMLP--- 209
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
             +M PE    G  T K+D +SFG++L  + +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T P
Sbjct: 137 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----TTP 184
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 185 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 85  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 143
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 144 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 191
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 192 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T P
Sbjct: 136 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----TTP 183
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 184 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 33/208 (15%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R  Q    VA+K +     +     ++EI     +RHPN+V    V
Sbjct: 27  IGAGNFG--VARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    +V EY   G L +R+ C  N+   S         +L S + + H+ +   + 
Sbjct: 84  ILTPTHLAIVMEYASGGELFERI-C--NAGRFSEDEARFFFQQLISGVSYAHAMQ---VA 137
Query: 650 HGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPK---GTFAYMDP 704
           H DLK  N LLD +     K++DFG S+                 + PK   GT AY+ P
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSK------------ASVLHSQPKSAVGTPAYIAP 185
Query: 705 EFLASGELTPK-SDVYSFGIILLRLLTG 731
           E L   E   K +DV+S G+ L  +L G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           L+ EY   G +   L   + +  +S    IR+  ++   + +LH    ++IVH DLKP N
Sbjct: 106 LILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQN 161
Query: 658 ILLDANFV---SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTP 714
           ILL + +     K+ DFG+SR +            C   +  GT  Y+ PE L    +T 
Sbjct: 162 ILLSSIYPLGDIKIVDFGMSRKIGH---------ACELREIMGTPEYLAPEILNYDPITT 212
Query: 715 KSDVYSFGIILLRLLT-GRPALG 736
            +D+++ GII   LLT   P +G
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVG 235

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 77  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEA 135
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 136 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 183
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 184 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T P
Sbjct: 130 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----TTP 177
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 178 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 569 EFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           + ++E  I   ++HPN+V L  +  E     LV++ +  G L + +  ++      + + 
Sbjct: 49  KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE------YYSE 102
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEIS 683
              +  +  +L  ++ C  + IVH DLKP N+LL +       KL+DFG++  +  ++ +
Sbjct: 103 ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                        GT  Y+ PE L         D+++ G+IL  LL G P
Sbjct: 163 WFGFA--------GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 46/255 (18%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV--- 554
           L+K    A +++H+ QF                +    +G G +G +   L++H +    
Sbjct: 28  LKKWESPAQNTAHLDQF----------------ERIRTLGTGSFGRVM--LVKHKETGNH 69
Query: 555 -AIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSL 608
            A+K+L    +    + +  ++   I   +  P LV L  +  +   L  V EY P G +
Sbjct: 70  YAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM 129
Query: 609 EDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
              L      S P     R   A ++     +LHS     +++ DLKP N+L+D     K
Sbjct: 130 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIK 182
Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           ++DFG ++      +      LC      GT  Y+ PE + S       D ++ G+++  
Sbjct: 183 VADFGFAK-----RVKGRTWXLC------GTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 728 LLTGRPALGITKEVQ 742
           +  G P     + +Q
Sbjct: 232 MAAGYPPFFADQPIQ 246

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 39/274 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQV-AIKM--LHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVG 590
           +IG GG   +++ L    Q+ AIK   L     Q    ++ EI  L+K++ H + +  + 
Sbjct: 35  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                   +Y  +  G+++     K       W+ +      L +V    H+   H IVH
Sbjct: 95  DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV----HTIHQHGIVH 150
Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKPAN L+  + + KL DFGI+     N++  +   +  +    GT  YM PE +   
Sbjct: 151 SDLKPANFLI-VDGMLKLIDFGIA-----NQMQPDXXXV-VKDSQVGTVNYMPPEAIKDM 203
Query: 711 ELTPKS-----------DVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLA 758
             + ++           DV+S G IL  +  G+ P   I  ++       KL  ++DP  
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNH 257
Query: 759 G-DWPFVQAEQLANLAMRCC----EMSRKSRPEL 787
             ++P +  + L ++ ++CC       R S PEL
Sbjct: 258 EIEFPDIPEKDLQDV-LKCCLKRDPKQRISIPEL 290

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T P
Sbjct: 131 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----TTP 178
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             T  Y+ PE L   +     D++S G+I+  LL G P  
Sbjct: 179 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 50/278 (17%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE-----FQQEIDILSKIRHPNLVTLVG 590
           IG+G +G +Y G   H +VAI+++    ++  +E     F++E+    + RH N+V  +G
Sbjct: 41  IGKGRFGQVYHGRW-HGEVAIRLI---DIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           AC  P    ++       +L      +D    L      +IA E+   + +LH+     I
Sbjct: 97  ACMSPPHLAIITSLCKGRTLYS--VVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGI 151
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLK  N+  D   V  ++DFG+       +       L  +    G   ++ PE + 
Sbjct: 152 LHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEIIR 207
Query: 709 SGELTP-----------KSDVYSFGIILLRL------LTGRPALGITKEVQYALDTGKLK 751
             +L+P            SDV++ G I   L         +PA  I     + + TG   
Sbjct: 208 --QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII----WQMGTGMKP 261
Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 789
           NL     G       ++++++ + C    ++ RP   K
Sbjct: 262 NLSQIGMG-------KEISDILLFCWAFEQEERPTFTK 292

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 569 EFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           + ++E  I   ++HPN+V L  +  E     LV++ +  G L + +  ++      + + 
Sbjct: 49  KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE------YYSE 102
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEIS 683
              +  +  +L  ++ C  + IVH DLKP N+LL +       KL+DFG++  +  ++ +
Sbjct: 103 ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                        GT  Y+ PE L         D+++ G+IL  LL G P
Sbjct: 163 WFGFA--------GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    L++     A+K+L+   +   +E   F++E D+L       + TL  
Sbjct: 82  IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A  +     LV +Y   G L   LS  ++  P     R  +A     ++I + S      
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEE-MARFYLA----EMVIAIDSVHQLHY 196
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL- 707
           VH D+KP NIL+D N   +L+DFG    L ++    ++  +       GT  Y+ PE L 
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-------GTPDYISPEILQ 249
Query: 708 ----ASGELTPKSDVYSFGIILLRLLTG 731
                 G   P+ D +S G+ +  +L G
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYG 277

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+++D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 30  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 88  PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 143
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 144 LHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 189
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 33/208 (15%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R  Q    VA+K +     +  +  ++EI     +RHPN+V    V
Sbjct: 27  IGSGNFG--VARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEV 83
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    +V EY   G L +R+    N+   S         +L S + + H+ +   + 
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQ---VC 137
Query: 650 HGDLKPANILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPK---GTFAYMDP 704
           H DLK  N LLD +   +L   DFG S+            +    + PK   GT AY+ P
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSK------------SSVLHSQPKSTVGTPAYIAP 185
Query: 705 EFLASGELTPK-SDVYSFGIILLRLLTG 731
           E L   E   K +DV+S G+ L  +L G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVG 590
           +GEG YG +     +     VAIK + P     P       +EI IL   +H N++T+  
Sbjct: 19  LGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 591 AC-PEVWTLVYE-YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P+ +    E Y+    ++  L    ++  LS         +    +  LH     ++
Sbjct: 77  IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NV 133
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--LCCRTDPKGTFAYMDPE- 705
           +H DLKP+N+L+++N   K+ DFG++R + ++   ++  T      T+   T  Y  PE 
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            L S + +   DV+S G IL  L   RP  
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIF 223

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
           P LV L  +  +   L  V EY+  G +   L    +   P   +      A ++     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFE 155
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GT 201
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 529 NFDPSLK---IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-H 582
           ++D  LK   +GEG +    K + +  +   A+K++   S +  +  Q+EI  L     H
Sbjct: 9   HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGH 65
Query: 583 PNLVTLVGACPEVW------TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           PN+V L     EV+       LV E L  G L +R+  K +    S      I  +L S 
Sbjct: 66  PNIVKL----HEVFHDQLHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSA 118
Query: 637 LIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           +  +H      +VH DLKP N+L    + N   K+ DFG +R         +N  L    
Sbjct: 119 VSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-----KPPDNQPL---K 167
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            P  T  Y  PE L         D++S G+IL  +L+G+
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
           P LV L  +  +   L  V EY+  G +   L    +   P   +      A ++     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFE 155
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GT 201
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
           P LV L  +  +   L  V EY+  G +   L    +   P   +      A ++     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFE 155
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GT 201
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      + P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 64  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
           P LV L  +  +   L  V EY+  G +   L    +   P   +      A ++     
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFE 176
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GT 222
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 38  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
           P LV L  +  +   L  V EY+  G +   L    +   P   +      A ++     
Sbjct: 96  PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFE 150
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT
Sbjct: 151 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GT 196
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 37/277 (13%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVA 555
           RK    +  ++ MP+  SD+   +     H       IG G YG +   Y  L + +   
Sbjct: 30  RKQHHSSKPTASMPRPHSDWQIPDRYEIRH------LIGTGSYGHVCEAYDKLEKRVVAI 83
Query: 556 IKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVG-ACPEVWTLVYEYLPNGSLEDRLS 613
            K+L     L       +EI IL+++ H ++V ++    P+      E      + D   
Sbjct: 84  KKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDF 143
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
            K    P+ + T + I T L ++L+ +       I+H DLKPAN L++ +   K+ DFG+
Sbjct: 144 KKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL 202
Query: 674 SRFLSQNEISSNNTTLCCRTDPKG--TFA-----------------YMDPEFLASGE-LT 713
           +R +   E  ++   +  R D     TF                  Y  PE +   E  T
Sbjct: 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT 262
Query: 714 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 750
              DV+S G I   LL       I + V Y  D G L
Sbjct: 263 EAIDVWSIGCIFAELLN-----MIKENVAYHADRGPL 294

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 536 IGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC 592
           +GEG +  +     L+   + A+K++        S   +E+++L + + H N++ L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 593 P--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              + + LV+E +  GS+   +  + +   L       +  ++ S L FLH+     I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN---KGIAH 134
Query: 651 GDLKPANILLD-ANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP NIL +  N VS  K+ DFG+   +  N   S  +T    T P G+  YM PE +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVV 193
Query: 708 ASGE-----LTPKSDVYSFGIILLRLLTGRPAL 735
            +          + D++S G+IL  LL+G P  
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVG 590
           +GEG YG +     +     VAIK + P     P       +EI IL   +H N++T+  
Sbjct: 19  LGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 591 AC-PEVWTLVYE-YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P+ +    E Y+    ++  L    ++  LS         +    +  LH     ++
Sbjct: 77  IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NV 133
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--LCCRTDPKGTFAYMDPE- 705
           +H DLKP+N+L+++N   K+ DFG++R + ++   ++  T      T+   T  Y  PE 
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            L S + +   DV+S G IL  L   RP  
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIF 223

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
           +F+  + +G+G +G +     +  +   AIK+L    +    + +    E  +L+ +  P
Sbjct: 20  DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 584 NLVTLVGACPEVWTLVY---EYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLI 638
             +T + +C +    +Y   EY+  G L   +    K   P       +  A E+   L 
Sbjct: 80  PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP-----QAVFYAAEISIGLF 134
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           FLH      I++ DLK  N++LD+    K++DFG+ +   ++ +    T   C     GT
Sbjct: 135 FLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFC-----GT 183
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE +A        D +++G++L  +L G+P  
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
            H D+KP NIL+ A+  + L DFGI+   +  +++    T+       GT  Y  PE  +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-------GTLYYXAPERFS 208
Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
               T ++D+Y+   +L   LTG P
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSP 233

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG 590
           ++G+G +  + + + +    + A K+++   L      + ++E  I   ++HPN+V L  
Sbjct: 38  ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +  E     LV++ +  G L + +  ++      + +    +  +  +L  ++    H I
Sbjct: 98  SISEEGFHYLVFDLVTGGELFEDIVARE------YYSEADASHCIHQILESVNHIHQHDI 151
Query: 649 VHGDLKPANILLDANF---VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP N+LL +       KL+DFG++  +   + +             GT  Y+ PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--------GTPGYLSPE 203
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
            L         D+++ G+IL  LL G P         +  D  KL   +   A D+P
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPPF-------WDEDQHKLYQQIKAGAYDFP 253

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 523 IEGATHNFD-------PSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPH-SLQGPSEF 570
            +GA  NF+       P  ++G G YG + K   RH+      A+K +    + Q     
Sbjct: 22  FQGAXENFEVKADDLEPIXELGRGAYGVVEK--XRHVPSGQIXAVKRIRATVNSQEQKRL 79
Query: 571 QQEIDILSK-IRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQT 625
             ++DI  + +  P  VT  GA     +VW  +   L + SL+       D    +    
Sbjct: 80  LXDLDISXRTVDCPFTVTFYGALFREGDVW--ICXELXDTSLDKFYKQVIDKGQTIPEDI 137
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
             +IA  +   L  LHS    S++H D+KP+N+L++A    K  DFGIS +L  +   + 
Sbjct: 138 LGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD--VAK 193
Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +    C+  P      ++PE    G  + KSD++S GI  + L   R
Sbjct: 194 DIDAGCK--PYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILR 237

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R  Q    VA+K +     +     ++EI     +RHPN+V    V
Sbjct: 26  IGSGNFG--VARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    +V EY   G L +R+    N+   S         +L S + + H+ +   + 
Sbjct: 83  ILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQ---VC 136
Query: 650 HGDLKPANILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPK---GTFAYMDP 704
           H DLK  N LLD +   +L   DFG S+            +    + PK   GT AY+ P
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSK------------SSVLHSQPKSTVGTPAYIAP 184
Query: 705 EFLASGELTPK-SDVYSFGIILLRLLTG 731
           E L   E   K +DV+S G+ L  +L G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ------EIDILSKIR----HP 583
           +G+GG+G+++ G  L   +QVAIK++  + + G S          E+ +L K+     HP
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 584 NLVTLVGA--CPEVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            ++ L+      E + LV E  LP   L D ++  +  P     +R         V+  +
Sbjct: 99  GVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT--EKGPLGEGPSRCFFG----QVVAAI 152
Query: 641 HSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
             C    +VH D+K  NIL+D     +KL DFG    L               TD  GT 
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----------TDFDGTR 202
Query: 700 AYMDPEFLASGELTP-KSDVYSFGIILLRLLTG 731
            Y  PE+++  +     + V+S GI+L  ++ G
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRH-PNLVTLVG 590
           +IG G YGS+ K + +     + +    S     E +Q   ++D++ +    P +V   G
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 591 A---------CPEVWTL----VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           A         C E+ +      Y+Y+         S  D+  P     +I +AT    V 
Sbjct: 89  ALFREGDCWICMELMSTSFDKFYKYV--------YSVLDDVIPEEILGKITLAT----VK 136
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
              H  +   I+H D+KP+NILLD +   KL DFGIS  L  +           +T   G
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---------IAKTRDAG 187
Query: 698 TFAYMDPEFL---ASGE-LTPKSDVYSFGIILLRLLTGR 732
              YM PE +   AS +    +SDV+S GI L  L TGR
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G+G +G +     K   R+   A+K+L    +    E    +    +L   RHP L  L
Sbjct: 17  LGKGTFGKVILVKEKATGRY--YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY   G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 75  KYSFQTHDRLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK- 129
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
            ++V+ DLK  N++LD +   K++DFG    L +  I    T    C      GT  Y+ 
Sbjct: 130 -NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFC------GTPEYLA 178
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ P  + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 583 PNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           P++V +V     ++       +V E L  G L  R+  + +    + +    I   +   
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQA-FTEREASEIXKSIGEA 173
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
           + +LHS    +I H D+KP N+L  +   N + KL+DFG ++     E +S+N+     T
Sbjct: 174 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSL----T 221
Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            P  T  Y+ PE L   +     D +S G+I   LL G P  
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 27/279 (9%)
Query: 535 KIGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG 590
           ++G+G +  + +   +L   + A K+++   L      + ++E  I   ++HPN+V L  
Sbjct: 29  ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 591 ACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +  E     L+++ +  G L + +  ++      + +    +  +  +L  +  C    +
Sbjct: 89  SISEEGHHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQMGV 142
Query: 649 VHGDLKPANILLDANF---VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP N+LL +       KL+DFG++  +   + +             GT  Y+ PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--------GTPGYLSPE 194
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV- 764
            L         D+++ G+IL  LL G P      E Q+ L         D  + +W  V 
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPF--WDEDQHRLYQQIKAGAYDFPSPEWDTVT 252
Query: 765 -QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 802
            +A+ L N  +      R +  E  K  W       ASC
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASC 291

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G+G +G +     K   R+   A+K+L    +    E    +    +L   RHP L  L
Sbjct: 18  LGKGTFGKVILVKEKATGRY--YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY   G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 76  KYSFQTHDRLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK- 130
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
            ++V+ DLK  N++LD +   K++DFG    L +  I    T    C      GT  Y+ 
Sbjct: 131 -NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFC------GTPEYLA 179
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIY------KGLLRHMQVA----IKMLHPHSLQGPSEFQQ 572
           I    ++F     IG GG+G +Y       G +  M+      IKM    +L        
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 242
Query: 573 EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
            + ++S    P +V +  A   P+  + + + +  G L   LS        S       A
Sbjct: 243 -LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYA 298
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            E+   L  +H+     +V+ DLKPANILLD +   ++SD G++   S+ +  ++     
Sbjct: 299 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 350
Query: 691 CRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTG 731
                 GT  YM PE L  G      +D +S G +L +LL G
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIY------KGLLRHMQVA----IKMLHPHSLQGPSEFQQ 572
           I    ++F     IG GG+G +Y       G +  M+      IKM    +L        
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 241
Query: 573 EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
            + ++S    P +V +  A   P+  + + + +  G L   LS        S       A
Sbjct: 242 -LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYA 297
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            E+   L  +H+     +V+ DLKPANILLD +   ++SD G++   S+ +  ++     
Sbjct: 298 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 349
Query: 691 CRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTG 731
                 GT  YM PE L  G      +D +S G +L +LL G
Sbjct: 350 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLVTL 588
           +G+G +G +     K   R+   A+K+L    +    E    +    +L   RHP L  L
Sbjct: 16  LGKGTFGKVILVKEKATGRY--YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
             +    +    V EY   G L   LS       +  + R R    E+ S L +LHS K 
Sbjct: 74  KYSFQTHDRLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK- 128
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPKGTFAYMD 703
            ++V+ DLK  N++LD +   K++DFG    L +  I    T    C      GT  Y+ 
Sbjct: 129 -NVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGATMKXFC------GTPEYLA 177
Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGR 732
           PE L   +     D +  G+++  ++ GR
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIY------KGLLRHMQVA----IKMLHPHSLQGPSEFQQ 572
           I    ++F     IG GG+G +Y       G +  M+      IKM    +L        
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 242
Query: 573 EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
            + ++S    P +V +  A   P+  + + + +  G L   LS        S       A
Sbjct: 243 -LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYA 298
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            E+   L  +H+     +V+ DLKPANILLD +   ++SD G++   S+ +  ++     
Sbjct: 299 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 691 CRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTG 731
                 GT  YM PE L  G      +D +S G +L +LL G
Sbjct: 352 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIY------KGLLRHMQVA----IKMLHPHSLQGPSEFQQ 572
           I    ++F     IG GG+G +Y       G +  M+      IKM    +L        
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM- 242
Query: 573 EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
            + ++S    P +V +  A   P+  + + + +  G L   LS        S       A
Sbjct: 243 -LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYA 298
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            E+   L  +H+     +V+ DLKPANILLD +   ++SD G++   S+ +  ++     
Sbjct: 299 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 691 CRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTG 731
                 GT  YM PE L  G      +D +S G +L +LL G
Sbjct: 352 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 68  SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 127
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 128 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 176
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 177 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 226
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 227 ELLTGR 232

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           +  A E+C  L  LH      IV+ DLKP NILLD +   ++SD G++  + + +     
Sbjct: 289 VFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 345
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                     GT  YM PE + +   T   D ++ G +L  ++ G+
Sbjct: 346 V---------GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV-- 589
           +G G YGS+   Y   LR      K+  P  SL       +E+ +L  ++H N++ L+  
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 590 ---GACPEVWTLVY--EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                  E ++ VY    L    L + + C+     LS +    +  +L   L ++HS  
Sbjct: 96  FTPATSIEDFSEVYLVTTLMGADLNNIVKCQ----ALSDEHVQFLVYQLLRGLKYIHSA- 150
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I+H DLKP+N+ ++ +   ++ DFG++R  +  E++    T   R  P+    +M  
Sbjct: 151 --GIIHRDLKPSNVAVNEDSELRILDFGLAR-QADEEMTGYVATRWYRA-PEIMLNWM-- 204
Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGR 732
                       D++S G I+  LL G+
Sbjct: 205 ------HYNQTVDIWSVGCIMAELLQGK 226

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHP 583
           T  ++    IG G Y    + + +  +M+ A+K++   S + P+E   EI+IL +  +HP
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-SKRDPTE---EIEILLRYGQHP 76
Query: 584 NLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N++TL  V    +   +V E +  G L D++         S +    +   +   + +LH
Sbjct: 77  NIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVEYLH 133
Query: 642 SCKPHSIVHGDLKPANILL---DANFVS-KLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
           +     +VH DLKP+NIL      N  S ++ DFG ++     ++ + N  L     P  
Sbjct: 134 A---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLRAENGLLMT---PCY 182
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           T  ++ PE L         D++S G++L  +LTG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 1   GSHSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 57
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 118 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 166
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 167 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 216
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 217 ELLTGR 222

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   IG G YGS+         ++VA+K L   
Sbjct: 7   SQERPTFYRQELNKTIWEVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRP 63
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 64  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 124 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKIL 172
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 173 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 222
Query: 730 TGR 732
           TGR
Sbjct: 223 TGR 225

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           +  A E+C  L  LH      IV+ DLKP NILLD +   ++SD G++  + + +     
Sbjct: 289 VFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 345
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                     GT  YM PE + +   T   D ++ G +L  ++ G+
Sbjct: 346 V---------GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 1   GSMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 57
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 118 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSEL 166
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 167 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 216
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 217 ELLTGR 222

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV-- 589
           +G G YGS+   Y   LR      K+  P  SL       +E+ +L  ++H N++ L+  
Sbjct: 28  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 590 ---GACPEVWTLVY--EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                  E ++ VY    L    L + + C+     LS +    +  +L   L ++HS  
Sbjct: 88  FTPATSIEDFSEVYLVTTLMGADLNNIVKCQ----ALSDEHVQFLVYQLLRGLKYIHSA- 142
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I+H DLKP+N+ ++ +   ++ DFG++R  +  E++    T   R  P+    +M  
Sbjct: 143 --GIIHRDLKPSNVAVNEDCELRILDFGLAR-QADEEMTGYVATRWYRA-PEIMLNWM-- 196
Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGR 732
                       D++S G I+  LL G+
Sbjct: 197 ------HYNQTVDIWSVGCIMAELLQGK 218

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 68  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 127
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 128 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 176
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 177 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 226
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 227 ELLTGR 232

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 1   GSMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 57
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 118 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 166
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 167 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 216
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 217 ELLTGR 222

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 505 ASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
            S S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 68  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 127
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 128 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 176
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 177 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 226
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 227 ELLTGR 232

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   Y   LR      K+  P  SL       +E+ +L  ++H N++ L+  
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                 +      YL    +   L+    S  LS +    +  +L   L ++HS     I
Sbjct: 96  FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA---GI 152
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLKP+N+ ++ +   ++ DFG++R  +  E++    T   R  P+    +M      
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR-QADEEMTGYVATRWYRA-PEIMLNWM------ 204
Query: 709 SGELTPKSDVYSFGIILLRLLTGR 732
                   D++S G I+  LL G+
Sbjct: 205 --HYNQTVDIWSVGCIMAELLQGK 226

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    +++ +   A+K+L+   +   +E   F++E D+L       +  L  
Sbjct: 82  IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 591 ACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A  +     LV +Y   G L   LS  ++  P     R  I      +++ + S      
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED-MARFYIG----EMVLAIDSIHQLHY 196
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH D+KP N+LLD N   +L+DFG    L  N+  +  +++       GT  Y+ PE L 
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAV-----GTPDYISPEILQ 249
Query: 709 S-----GELTPKSDVYSFGIILLRLLTG 731
           +     G+  P+ D +S G+ +  +L G
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYG 277

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVG 590
           IG G +G +    +++ +   A+K+L+   +   +E   F++E D+L       +  L  
Sbjct: 98  IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 591 ACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           A  +     LV +Y   G L   LS  ++  P     R  I      +++ + S      
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED-MARFYIG----EMVLAIDSIHQLHY 212
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH D+KP N+LLD N   +L+DFG    L  N+  +  +++       GT  Y+ PE L 
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAV-----GTPDYISPEILQ 265
Query: 709 S-----GELTPKSDVYSFGIILLRLLTG 731
           +     G+  P+ D +S G+ +  +L G
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYG 293

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 536 IGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGA 591
           IG+G +  + +   L    + A K+++   L      + ++E  I   ++H N+V L  +
Sbjct: 12  IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 592 CPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
             E     LV++ +  G L + +  ++      + +    +  +  +L  +  C    +V
Sbjct: 72  ISEEGFHYLVFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQMGVV 125
Query: 650 HGDLKPANILLDANF---VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP N+LL +       KL+DFG++  +  ++ +             GT  Y+ PE 
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGYLSPEV 177
Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 762
           L         D+++ G+IL  LL G P         +  D  KL   +   A D+P
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPF-------WDEDQHKLYQQIKAGAYDFP 226

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 7   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 63
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 64  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 124 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKIL 172
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 173 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 222
Query: 730 TGR 732
           TGR
Sbjct: 223 TGR 225

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 42/247 (17%)
Query: 504 EASSSSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKM 558
           ++++S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K 
Sbjct: 21  QSNASQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKK 77
Query: 559 LHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLE 609
           L     S+       +E+ +L  ++H N++ L+       +L     VY   +L    L 
Sbjct: 78  LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 137
Query: 610 DRLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665
           + + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +  
Sbjct: 138 NIVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 186
Query: 666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL 725
            K+ DFG++R  + +E+     T   R  P+    +M              D++S G I+
Sbjct: 187 LKILDFGLARH-TDDEMXGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIM 236
Query: 726 LRLLTGR 732
             LLTGR
Sbjct: 237 AELLTGR 243

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      L       GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLA------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVG 590
           +GEG YG +     +     VAIK + P     P       +EI IL   +H N++T+  
Sbjct: 19  LGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 591 AC-PEVWTLVYE-YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
              P+ +    E Y+    ++  L    ++  LS         +    +  LH     ++
Sbjct: 77  IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NV 133
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT--LCCRTDPKGTFAYMDPE- 705
           +H DLKP+N+L+++N   K+ DFG++R + ++   ++  T       +   T  Y  PE 
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            L S + +   DV+S G IL  L   RP  
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIF 223

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 44/244 (18%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRL 728
           DFG++R  + +E++    T   R           PE + +        D++S G I+  L
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA----------PEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 729 LTGR 732
           LTGR
Sbjct: 217 LTGR 220

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 13  SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 69
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 70  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 130 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKIL 178
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 179 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 228
Query: 730 TGR 732
           TGR
Sbjct: 229 TGR 231

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 509 SHM----PQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
           SHM    P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 18  SHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 74
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 75  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 134
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 135 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 183
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 184 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 233
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 234 ELLTGR 239

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 509 SHM----PQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML 559
           SHM    P F+    + +  E+     N  P   +G G YGS+         ++VA+K L
Sbjct: 19  SHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKL 75
Query: 560 HP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
                S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 76  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 136 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 184
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 185 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 234
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 235 ELLTGR 240

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      LC      GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLC------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
             + PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 77  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 123
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 124 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 170
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 72  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 118
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 119 ---VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 165
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 9   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 65
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 66  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 126 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 174
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 175 DFGLARH-TADEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 224
Query: 730 TGR 732
           TGR
Sbjct: 225 TGR 227

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----- 588
           +G GG G ++  +      +VAIK +     Q      +EI I+ ++ H N+V +     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 589 ---------VGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                    VG+  E+ +  +V EY+      D  +  +  P L    R+    +L   L
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMET----DLANVLEQGPLLEEHARL-FMYQLLRGL 133
Query: 638 IFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
            ++HS    +++H DLKPAN+ ++  + V K+ DFG++R +  +     + +    T   
Sbjct: 134 KYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK-- 188
Query: 697 GTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
               Y  P  L S    T   D+++ G I   +LTG+       E++
Sbjct: 189 ---WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 13  SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 69
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 70  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 130 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 178
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 179 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 228
Query: 730 TGR 732
           TGR
Sbjct: 229 TGR 231

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 9   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 65
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 66  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 126 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 174
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 175 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 224
Query: 730 TGR 732
           TGR
Sbjct: 225 TGR 227

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 7   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 63
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 64  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 124 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 172
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 173 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 222
Query: 730 TGR 732
           TGR
Sbjct: 223 TGR 225

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 1   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 57
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 58  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 117
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 118 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 166
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 167 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 216
Query: 730 TGR 732
           TGR
Sbjct: 217 TGR 219

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           +  A E+   L FL S     I++ DLK  N++LD+    K++DFG+ +   +N      
Sbjct: 445 VFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVT 498
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           T   C     GT  Y+ PE +A        D ++FG++L  +L G+
Sbjct: 499 TKXFC-----GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 9   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 65
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 66  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 126 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 174
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 175 DFGLARH-TADEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 224
Query: 730 TGR 732
           TGR
Sbjct: 225 TGR 227

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 8   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 64
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 65  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 125 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 173
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 174 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 223
Query: 730 TGR 732
           TGR
Sbjct: 224 TGR 226

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 4   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 61  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 121 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 169
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 170 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 219
Query: 730 TGR 732
           TGR
Sbjct: 220 TGR 222

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 92  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 138
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 139 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 185
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 76  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 122
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 123 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 169
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 31  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 91  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 137
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 138 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 184
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 9   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 65
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 66  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 126 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 174
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 175 DFGLARH-TADEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 224
Query: 730 TGR 732
           TGR
Sbjct: 225 TGR 227

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 96  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 202
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 203 WM--------HYNQTVDIWSVGCIMAELLTGR 226

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 77  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 123
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 124 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 170
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 31  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 91  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 137
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 138 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 184
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           +  A E+   L FL S     I++ DLK  N++LD+    K++DFG+ +   +N      
Sbjct: 124 VFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVT 177
Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           T   C     GT  Y+ PE +A        D ++FG++L  +L G+
Sbjct: 178 TKXFC-----GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 150
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 151 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 197
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH    + ++H DLK  N+ L+ +   K+ DFG++  +  +       TLC      GT
Sbjct: 136 YLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLC------GT 184
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L+    + + DV+S G I+  LL G+P  
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 30/223 (13%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID---ILSKIRH 582
           FD    +G G +G +   L++H +     A+K+L    +    + +  ++   IL  +  
Sbjct: 43  FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 583 PNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           P LV L  +  +   L  V EY+  G +   L      S P     R   A ++     +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 156
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     +++ DLKP N+L+D     +++DFG ++      +      L       GT 
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLX------GTP 202
Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            Y+ PE + S       D ++ G+++  +  G P     + +Q
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH+   + ++H DLK  N+ L+ +   K+ DFG++  +  +       TLC      GT
Sbjct: 157 YLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKTLC------GT 205
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L     + + D++S G IL  LL G+P  
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 96  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 202
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 203 WM--------HYNQTVDIWSVGCIMAELLTGR 226

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 92  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 138
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 139 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 185
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 25  SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 81
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 82  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 142 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 190
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 191 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 240
Query: 730 TGR 732
           TGR
Sbjct: 241 TGR 243

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 536 IGEGGYGSIYK--GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC 592
           +GEG +  +     L+   + A+K++        S   +E+++L + + H N++ L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 593 P--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              + + LV+E +  GS+   +  + +   L       +  ++ S L FLH+     I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN---KGIAH 134
Query: 651 GDLKPANILLD-ANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP NIL +  N VS  K+ DF +   +  N   S  +T    T P G+  YM PE +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVV 193
Query: 708 ASGE-----LTPKSDVYSFGIILLRLLTGRPAL 735
            +          + D++S G+IL  LL+G P  
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H DLK  N+ L+ +   K+ DFG++  +  +       TLC      GT  Y+ PE L
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLC------GTPNYIAPEVL 189
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRPAL 735
           +    + + DV+S G I+  LL G+P  
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 217

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H DLK  N+ L+ +   K+ DFG++  +  +       TLC      GT  Y+ PE L
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKTLC------GTPNYIAPEVL 189
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRPAL 735
           +    + + DV+S G I+  LL G+P  
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 217

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 32  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 92  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 138
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 139 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 185
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGXVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 15  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 75  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 121
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 122 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 168
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 508 SSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ 565
            SHM   FSD            +     IG G Y    + + +  +M+ A+K++   S +
Sbjct: 18  GSHMNLVFSD-----------GYVVKETIGVGSYSECKRCVHKATNMEYAVKVID-KSKR 65
Query: 566 GPSEFQQEIDILSKI-RHPNLVTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPL 621
            PSE   EI+IL +  +HPN++TL     +   V+ LV E +  G L D++  +      
Sbjct: 66  DPSE---EIEILLRYGQHPNIITLKDVYDDGKHVY-LVTELMRGGELLDKILRQKF---F 118
Query: 622 SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL-LDANF---VSKLSDFGISRFL 677
           S +    +   +   + +LHS     +VH DLKP+NIL +D +      ++ DFG ++  
Sbjct: 119 SEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-- 173
Query: 678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
              ++ + N  L     P  T  ++ PE L         D++S GI+L  +L G
Sbjct: 174 ---QLRAENGLLMT---PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 59  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 165
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 166 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 212
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 151
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 152 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 198
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 150
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 151 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 197
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 77  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 123
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 124 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 170
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 151
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 152 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 198
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 150
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 151 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 197
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 517 DFSF-SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQE 573
           D+ +  E+  ATH     L++G G +G +++   +    Q A+K +     +      +E
Sbjct: 66  DYEYREEVHWATHQ----LRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EE 116
Query: 574 IDILSKIRHPNLVTLVGACPE-VWTLVY-EYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           +   + +  P +V L GA  E  W  ++ E L  GSL   +  +   P       +    
Sbjct: 117 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLG 173
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-SKLSDFGISRFLSQNEISSNNTTLC 690
           +    L +LHS     I+HGD+K  N+LL ++   + L DFG +  L  + +  +   L 
Sbjct: 174 QALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD---LL 227
Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
                 GT  +M PE +       K DV+S   ++L +L G
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 157
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 158 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 204
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 44  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 150
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 151 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 197
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 151
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 152 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 198
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 59  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 165
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 166 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 212
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 45  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 151
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 152 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 198
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 46/246 (18%)
Query: 509 SHM----PQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVAIKM 558
           SHM    P F+    + +  E+     N  P   +G G YGS+   +     H     K+
Sbjct: 18  SHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKL 74
Query: 559 LHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
             P  S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 75  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 134
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 135 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 183
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 184 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 233
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 234 ELLTGR 239

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 7   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 63
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 64  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 124 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 172
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 173 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 222
Query: 730 TGR 732
           TGR
Sbjct: 223 TGR 225

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 46/246 (18%)
Query: 509 SHM----PQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVAIKM 558
           SHM    P F+    + +  E+     N  P   +G G YGS+   +     H     K+
Sbjct: 19  SHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKL 75
Query: 559 LHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
             P  S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 76  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 136 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 184
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E++    T   R  P+    +M              D++S G I+ 
Sbjct: 185 KILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 234
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 235 ELLTGR 240

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 64  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 170
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 171 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 217
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 218 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 52/226 (23%)
Query: 537 GEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDI---LSKIRHPNLVTLVGA 591
           G+G +G++  G  +   M VAIK +    +Q P    +E+ I   L+ + HPN+V L   
Sbjct: 32  GQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 592 CPEVWTL------------VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
               +TL            V EY+P+        C++      ++ ++     L  V +F
Sbjct: 88  ---FYTLGERDRRDIYLNVVMEYVPDTL---HRCCRN-----YYRRQVAPPPILIKVFLF 136
Query: 640 --------LHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLC 690
                   LH     ++ H D+KP N+L++ A+   KL DFG ++ LS +E   N   +C
Sbjct: 137 QLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYIC 193
Query: 691 CRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPAL 735
            R        Y  PE +   +  T   D++S G I   ++ G P  
Sbjct: 194 SRY-------YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 72  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 118
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 119 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 165
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2OXQ|C Chain C, Structure Of The Ubch5 :chip U-Box Complex Length = 80

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 810 LGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHK 869
           +GS++R E P Y    I  E+M +P +   G TY+ + ++  L       P+T  PL   
Sbjct: 3   MGSKKR-EIPDYLCGKISFELMAEPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQD 61
Query: 870 NLVPNLALRSAIQEWLQQH 888
            L+PNLA++  I  ++Q++
Sbjct: 62  QLIPNLAMKEVIDAFIQEN 80

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 517 DFSF-SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQE 573
           D+ +  E+  ATH     L++G G +G +++   +    Q A+K +     +      +E
Sbjct: 85  DYEYREEVHWATHQ----LRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EE 135
Query: 574 IDILSKIRHPNLVTLVGACPE-VWTLVY-EYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           +   + +  P +V L GA  E  W  ++ E L  GSL   +  +   P       +  A 
Sbjct: 136 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL 195
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-SKLSDFGISRFLSQNEISSNNTTLC 690
           E    L +LHS     I+HGD+K  N+LL ++   + L DFG +  L  + +     +L 
Sbjct: 196 E---GLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL---GKSLL 246
Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
                 GT  +M PE +       K DV+S   ++L +L G
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 39  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 99  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 145
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 146 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 192
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 87  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 138
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 193
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 194 WM--------HYNQTVDIWSVGCIMAELLTGR 217

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVAIKMLHP 561
           S   P F+    + +  E+     N  P   +G G YGS+   +     H     K+  P
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DFG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 87  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 138
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 139 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 193
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 194 WM--------HYNQTVDIWSVGCIMAELLTGR 217

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H DLK  N+ L+ +   K+ DFG++   ++ E       + C     GT  Y+ PE L
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLC-----GTPNYIAPEVL 187
Query: 708 ASGELTPKSDVYSFGIILLRLLTGRPAL 735
           +    + + DV+S G I+  LL G+P  
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPF 215

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 96  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 147
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 148 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 202
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 203 WM--------HYNQTVDIWSVGCIMAELLTGR 226

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G GG+G ++   ++     +    +        +G      E  IL+K+    +V+L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 591 ACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTR-IRIATELCSVLIFLHSCKPH 646
           A  E  T   LV   +  G +   +   D   P   + R I    ++ S L  LH     
Sbjct: 253 AF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I++ DLKP N+LLD +   ++SD G++  L   +  +            GT  +M PE 
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--------GTPGFMAPEL 360
Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L   E     D ++ G+ L  ++  R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH    + ++H DLK  N+ L+ +   K+ DFG++   ++ E       + C     GT
Sbjct: 154 YLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLC-----GT 202
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L+    + + DV+S G I+  LL G+P  
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R  Q    VA+K +     +     ++EI     +RHPN+V    V
Sbjct: 27  IGSGNFG--VARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    +V EY   G L +R+    N+   S         +L S + + H+ +   + 
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQ---VC 137
Query: 650 HGDLKPANILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPK---GTFAYMDP 704
           H DLK  N LLD +   +L    FG S+            +    + PK   GT AY+ P
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSK------------SSVLHSQPKSTVGTPAYIAP 185
Query: 705 EFLASGELTPK-SDVYSFGIILLRLLTG 731
           E L   E   K +DV+S G+ L  +L G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R  Q    VA+K +     +     ++EI     +RHPN+V    V
Sbjct: 27  IGSGNFG--VARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    +V EY   G L +R+    N+   S         +L S + + H+ +   + 
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQ---VC 137
Query: 650 HGDLKPANILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPK---GTFAYMDP 704
           H DLK  N LLD +   +L    FG S+            +    + PK   GT AY+ P
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSK------------SSVLHSQPKDTVGTPAYIAP 185
Query: 705 EFLASGELTPK-SDVYSFGIILLRLLTG 731
           E L   E   K +DV+S G+ L  +L G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH    + ++H DLK  N+ L+ +   K+ DFG++   ++ E       + C     GT
Sbjct: 156 YLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLC-----GT 204
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L+    + + DV+S G I+  LL G+P  
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+   PE    +++++   G+L++ L+         WQ        
Sbjct: 72  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-----FFWQ-------- 118
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 119 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 165
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKML--HPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+ E   G ++KG  +   + +K+L     S +   +F +E   L    HPN++ ++GAC
Sbjct: 17  KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 593 -----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                P   TL+  ++P GSL + L    N   +     ++ A ++   + FLH+ +P  
Sbjct: 77  QSPPAPHP-TLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLI 134
Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
             H  L   ++++D +  +++S   + +F  Q+              P   +A   P ++
Sbjct: 135 PRHA-LNSRSVMIDEDMTARISMADV-KFSFQS--------------PGRMYA---PAWV 175
Query: 708 ASGELTPK--------SDVYSFGIILLRLLTGRPALGITKEVQYA 744
           A   L  K        +D++SF ++L  L        +T+EV +A
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWEL--------VTREVPFA 212

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G GG+G ++   ++     +    +        +G      E  IL+K+    +V+L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 591 ACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTR-IRIATELCSVLIFLHSCKPH 646
           A  E  T   LV   +  G +   +   D   P   + R I    ++ S L  LH     
Sbjct: 253 AF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I++ DLKP N+LLD +   ++SD G++  L   +  +            GT  +M PE 
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--------GTPGFMAPEL 360
Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L   E     D ++ G+ L  ++  R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 86  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 192
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 193 WM--------HYNQTVDIWSVGCIMAELLTGR 216

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 529 NFDPSLKIGEGGYGSI-YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLV 586
           +F P   +G G  G+I Y+G+  +  VA+K + P      S   +E+ +L +   HPN++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVI 81
Query: 587 TLVGACPEV---WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                C E    +  +   L   +L++ +  KD +  L  +  I +  +  S L  LHS 
Sbjct: 82  RYF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAH-LGLEP-ITLLQQTTSGLAHLHSL 137
Query: 644 KPHSIVHGDLKPANILLD-----ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
              +IVH DLKP NIL+          + +SDFG+ + L+    S +      R+   GT
Sbjct: 138 ---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-----RSGVPGT 189
Query: 699 FAYMDPEFLASG---ELTPKSDVYSFGIILLRLLT 730
             ++ PE L+       T   D++S G +   +++
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 151
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 152 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 206
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 207 WM--------HYNQTVDIWSVGCIMAELLTGR 230

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH+   + ++H DLK  N+ L+ +   K+ DFG++   ++ E         C     GT
Sbjct: 157 YLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKXLC-----GT 205
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L     + + D++S G IL  LL G+P  
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 46/246 (18%)
Query: 509 SHM----PQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVAIKM 558
           SHM    P F+    + +  E+     N  P   +G G YGS+   +     H     K+
Sbjct: 19  SHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKL 75
Query: 559 LHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLED 610
             P  S+       +E+ +L  ++H N++ L+       +L     VY   +L    L +
Sbjct: 76  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 611 RLSCK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
            + C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   
Sbjct: 136 IVKCQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 184
Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           K+ DFG++R  + +E+     T   R  P+    +M              D++S G I+ 
Sbjct: 185 KILDFGLARH-TDDEMXGXVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMA 234
Query: 727 RLLTGR 732
            LLTGR
Sbjct: 235 ELLTGR 240

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
           IG G Y    + + +  +M+ A+K++   S + PSE   EI+IL +  +HPN++TL    
Sbjct: 35  IGVGSYSECKRCVHKATNMEYAVKVID-KSKRDPSE---EIEILLRYGQHPNIITLKDVY 90
Query: 593 PE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
            +   V+ LV E +  G L D++         S +    +   +   + +LHS     +V
Sbjct: 91  DDGKHVY-LVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVEYLHS---QGVV 143
Query: 650 HGDLKPANIL-LDANF---VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H DLKP+NIL +D +      ++ DFG ++     ++ + N  L     P  T  ++ PE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRAENGLLMT---PCYTANFVAPE 195
Query: 706 FLASGELTPKSDVYSFGIILLRLLTG 731
            L         D++S GI+L  +L G
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G GG+G ++   ++     +    +        +G      E  IL+K+    +V+L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 591 ACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTR-IRIATELCSVLIFLHSCKPH 646
           A  E  T   LV   +  G +   +   D   P   + R I    ++ S L  LH     
Sbjct: 253 AF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I++ DLKP N+LLD +   ++SD G++  L   +  +            GT  +M PE 
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--------GTPGFMAPEL 360
Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L   E     D ++ G+ L  ++  R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 88  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 139
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 140 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 194
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 195 WM--------HYNQTVDIWSVGCIMAELLTGR 218

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +G GG+G ++   ++     +    +        +G      E  IL+K+    +V+L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 591 ACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTR-IRIATELCSVLIFLHSCKPH 646
           A  E  T   LV   +  G +   +   D   P   + R I    ++ S L  LH     
Sbjct: 253 AF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I++ DLKP N+LLD +   ++SD G++  L   +  +            GT  +M PE 
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--------GTPGFMAPEL 360
Query: 707 LASGELTPKSDVYSFGIILLRLLTGR 732
           L   E     D ++ G+ L  ++  R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           D+G++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DYGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 569 EFQQEIDILSKIRHPNLVTLVGACPEVW--TLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
           + ++E  I   ++HPN+V L  +  E     L+++ +  G L + +  ++      + + 
Sbjct: 56  KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE------YYSE 109
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFGISRFLSQNEIS 683
              +  +  +L  +  C    +VH +LKP N+LL +       KL+DFG++  +   + +
Sbjct: 110 ADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169
Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY 743
                        GT  Y+ PE L         D+++ G+IL  LL G P      E Q+
Sbjct: 170 WFGFA--------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW--DEDQH 219
Query: 744 ALDTGKLKNLLDPLAGDWPFV--QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
            L         D  + +W  V  +A+ L N  +      R +  E  K  W       AS
Sbjct: 220 RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVAS 279
Query: 802 C 802
           C
Sbjct: 280 C 280

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+     +   +++A+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 59  VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                +L     VY   +L    L + + C+     L+      +  ++   L ++HS  
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHSA- 173
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    +M  
Sbjct: 174 --DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWMHY 229
Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGR 732
                       D++S G I+  LLTGR
Sbjct: 230 NMTV--------DIWSVGCIMAELLTGR 249

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 90  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGFVATRWYRA-PEIMLN 196
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 197 WM--------HYNQTVDIWSVGCIMAELLTGR 220

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 90  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 141
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGFVATRWYRA-PEIMLN 196
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 197 WM--------HYNQTVDIWSVGCIMAELLTGR 220

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 86  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 192
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 193 WM--------HYNQTVDIWSVGCIMAELLTGR 216

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           LV+E L + +L D L    N   +S     + A ++C+ L+FL +    SI+H DLKP N
Sbjct: 133 LVFEML-SYNLYDLLR-NTNFRGVSLNLTRKFAQQMCTALLFL-ATPELSIIHCDLKPEN 189
Query: 658 ILL--DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
           ILL        K+ DFG S  L Q       +             Y  PE L        
Sbjct: 190 ILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF-----------YRSPEVLLGMPYDLA 238
Query: 716 SDVYSFGIILLRLLTGRPALGITKEV 741
            D++S G IL+ + TG P      EV
Sbjct: 239 IDMWSLGCILVEMHTGEPLFSGANEV 264

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH+   + ++H DLK  N+ L+ +   K+ DFG++   ++ E         C     GT
Sbjct: 157 YLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKDLC-----GT 205
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L     + + D++S G IL  LL G+P  
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
           +LH+   + ++H DLK  N+ L+ +   K+ DFG++   ++ E         C     GT
Sbjct: 141 YLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKDLC-----GT 189
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
             Y+ PE L     + + D++S G IL  LL G+P  
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226

>pdb|2F42|A Chain A, Dimerization And U-Box Domains Of Zebrafish C-Terminal Of Hsp70 Interacting Protein Length = 179

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 817 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 876
           E P Y    I  E+M++P +   G TY+ + ++  L       P+T  PL    L+PNLA
Sbjct: 102 EIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLA 161
Query: 877 LRSAIQEWLQQH 888
           ++  I  ++Q++
Sbjct: 162 MKEVIDAFIQEN 173

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQ--TRIRIATELCSVLIFLHSCKPHSIV 649
                +L  E   +  L   L   D +  +  Q  T   +   +  +L  L       I+
Sbjct: 90  FTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    +M       
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM------- 198
Query: 710 GELTPKSDVYSFGIILLRLLTGR 732
                  D++S G I+  LLTGR
Sbjct: 199 -HYNQTVDIWSVGCIMAELLTGR 220

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSC----KDNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C     D+   L +Q        +   L ++
Sbjct: 86  FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMTGYVATRWYRA-PEIMLN 192
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 193 WM--------HYNQTVDIWSVGCIMAELLTGR 216

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +G G YGS+   +     H     K+  P  S+       +E+ +L  ++H N++ L+  
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 592 CPEVWTL-----VY--EYLPNGSLEDRLSCK----DNSPPLSWQTRIRIATELCSVLIFL 640
                +L     VY   +L    L + + C+    D+   L +Q        +   L ++
Sbjct: 86  FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ--------ILRGLKYI 137
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     I+H DLKP+N+ ++ +   K+ DFG++R  + +E++    T   R  P+    
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEMAGFVATRWYRA-PEIMLN 192
Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           +M              D++S G I+  LLTGR
Sbjct: 193 WM--------HYNQTVDIWSVGCIMAELLTGR 216

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 582 HPNLVTLVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C +  +    V EY+  G L   +  +   P    +   R  + E+   L
Sbjct: 80  HPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 134
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH      I++ DLK  N+LLD+    KL+D+G+ +   +     + T+  C     G
Sbjct: 135 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFC-----G 183
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 738
           T  Y+ PE L   +     D ++ G+++  ++ GR    I 
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           LV+E L + +L D L    N   +S     + A ++C+ L+FL +    SI+H DLKP N
Sbjct: 114 LVFEML-SYNLYDLLR-NTNFRGVSLNLTRKFAQQMCTALLFL-ATPELSIIHCDLKPEN 170
Query: 658 ILL--DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
           ILL        K+ DFG S  L Q       +             Y  PE L        
Sbjct: 171 ILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----------YRSPEVLLGMPYDLA 219
Query: 716 SDVYSFGIILLRLLTGRPALGITKEV 741
            D++S G IL+ + TG P      EV
Sbjct: 220 IDMWSLGCILVEMHTGEPLFSGANEV 245

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            L  LHS     +VH D+KPANI L      KL DFG+       E+ +         DP
Sbjct: 169 ALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL-----LVELGTAGAGEVQEGDP 220
Query: 696 KGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           +    YM PE L  G     +DV+S G+ +L
Sbjct: 221 R----YMAPELL-QGSYGTAADVFSLGLTIL 246

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPP 620
             S+       +E+ +L  ++H N++ L+       +L  E   +  L   L   D +  
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNI 116
Query: 621 LSWQ--TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 678
           +  Q  T   +   +  +L  L       I+H DLKP+N+ ++ +   K+ DFG++R  +
Sbjct: 117 VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-T 175
Query: 679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            +E++    T   R  P+    +M              D++S G I+  LLTGR
Sbjct: 176 DDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
           LV+E L + +L D L    N   +S     + A ++C+ L+FL +    SI+H DLKP N
Sbjct: 133 LVFEML-SYNLYDLLR-NTNFRGVSLNLTRKFAQQMCTALLFL-ATPELSIIHCDLKPEN 189
Query: 658 ILL--DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK 715
           ILL        K+ DFG S  L Q       +             Y  PE L        
Sbjct: 190 ILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----------YRSPEVLLGMPYDLA 238
Query: 716 SDVYSFGIILLRLLTGRPALGITKEV 741
            D++S G IL+ + TG P      EV
Sbjct: 239 IDMWSLGCILVEMHTGEPLFSGANEV 264

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 582 HPNLVTLVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C +  +    V EY+  G L   +  +   P    +   R  + E+   L
Sbjct: 112 HPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 166
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH      I++ DLK  N+LLD+    KL+D+G+ +   +     + T+  C     G
Sbjct: 167 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFC-----G 215
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 738
           T  Y+ PE L   +     D ++ G+++  ++ GR    I 
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +IGEG +G I++G  LL + QVAIK   P     P        +  + R   L+      
Sbjct: 17  RIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAPQ-------LRDEYRTYKLLAGCTGI 68
Query: 593 PEVWTLVYEYLPN--------GSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           P V+    E L N         SLED L  C       S +T   +A     +L  + S 
Sbjct: 69  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC---GRKFSVKT---VAMAAKQMLARVQSI 122
Query: 644 KPHSIVHGDLKPANILL------DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
              S+V+ D+KP N L+      +AN +  + DFG+ +F  ++ ++  +     + +  G
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIY-VVDFGMVKFY-RDPVTKQHIPYREKKNLSG 180
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           T  YM        E + + D+ + G + +  L G
Sbjct: 181 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 41/228 (17%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           KIGEG + S+Y    +       ++A+K L P S   P     E+  L+     + V  V
Sbjct: 28  KIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGV 85
Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             C    +   +   YL + S  D L+       LS+Q        L   L  +H     
Sbjct: 86  KYCFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---F 136
Query: 647 SIVHGDLKPANILLDANFVS-KLSDFGIS-----------RFLS----QNEISSNNTTLC 690
            IVH D+KP+N L +       L DFG++           +F+     Q   S N  ++C
Sbjct: 137 GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 691 C----RTDPK-GTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGR 732
                +  P+ GT  +  PE L      T   D++S G+I L LL+GR
Sbjct: 197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 582 HPNLVTLVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C +  +    V EY+  G L   +  +   P    +   R  + E+   L
Sbjct: 65  HPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 119
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH      I++ DLK  N+LLD+    KL+D+G+ +   +     + T+  C     G
Sbjct: 120 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFC-----G 168
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 738
           T  Y+ PE L   +     D ++ G+++  ++ GR    I 
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +IGEG +G I++G  LL + QVAIK   P     P        +  + R   L+      
Sbjct: 16  RIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAPQ-------LRDEYRTYKLLAGCTGI 67
Query: 593 PEVWTLVYEYLPN--------GSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           P V+    E L N         SLED L  C       S +T   +A     +L  + S 
Sbjct: 68  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC---GRKFSVKT---VAMAAKQMLARVQSI 121
Query: 644 KPHSIVHGDLKPANILL------DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
              S+V+ D+KP N L+      +AN +  + DFG+ +F  ++ ++  +     + +  G
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNSKNANMIY-VVDFGMVKFY-RDPVTKQHIPYREKKNLSG 179
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           T  YM        E + + D+ + G + +  L G
Sbjct: 180 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 213

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 582 HPNLVTLVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
           HP LV L  +C +  +    V EY+  G L   +  +   P    +   R  + E+   L
Sbjct: 69  HPFLVGL-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----EEHARFYSAEISLAL 123
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +LH      I++ DLK  N+LLD+    KL+D+G+ +   +     + T+  C     G
Sbjct: 124 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFC-----G 172
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 738
           T  Y+ PE L   +     D ++ G+++  ++ GR    I 
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
            FG++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 GFGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 30/237 (12%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKD---- 616
             S+       +E+ +L  ++H N++ L+       +L  E   +  L   L   D    
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNI 116
Query: 617 -NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
             S  L+      +  ++   L ++HS     I+H DLKP+N+ ++ +   K+ DFG+ R
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR 173
Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
             + +E++    T   R  P+    +M              D++S G I+  LLTGR
Sbjct: 174 H-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 43/228 (18%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHP--HSLQGPSEFQQEIDIL 577
           E+     +  P   +G G YG++   +      +VAIK L+    S        +E+ +L
Sbjct: 22  EVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 78
Query: 578 SKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLS------------WQT 625
             +RH N++ L+            + P+ +L+D        P +              + 
Sbjct: 79  KHMRHENVIGLLDV----------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 626 RIR-IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 684
           RI+ +  ++   L ++H+     I+H DLKP N+ ++ +   K+ DFG++R  + +E+  
Sbjct: 129 RIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR-QADSEMXG 184
Query: 685 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
              T   R  P+    +M          T   D++S G I+  ++TG+
Sbjct: 185 XVVTRWYRA-PEVILNWM--------RYTQTVDIWSVGCIMAEMITGK 223

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           D G++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DAGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 40/213 (18%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKML-HPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
           IG G  G +   Y  +L    VAIK L  P   Q  ++   +E+ ++  + H N++ L+ 
Sbjct: 32  IGSGAQGIVVAAYDAILER-NVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 591 ACPEVWTLVYEYLPNGSLED----RLSCKDNSPPLSWQTRIRIATELCSVLIF------- 639
                      + P  SLE+     +  +     LS   ++ +  E  S L++       
Sbjct: 91  V----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 640 -LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            LHS     I+H DLKP+NI++ ++   K+ DFG++R            T    T    T
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFMMTPYVVT 188
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
             Y  PE +         D++S G+I+  ++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           D G++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DRGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG-----PSEFQQEIDILSKIRHPNLVTL 588
           IG+G +  + + + R    Q A+K++              + ++E  I   ++HP++V L
Sbjct: 34  IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-LCSVLIFLHSCKP 645
           +       +  +V+E++    L   +  + ++  +  +    +A+  +  +L  L  C  
Sbjct: 94  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA---VASHYMRQILEALRYCHD 150
Query: 646 HSIVHGDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           ++I+H D+KP  +LL +   S   KL  FG++  L ++ + +            GT  +M
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--------GTPHFM 202
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLK 751
            PE +         DV+  G+IL  LL+G  P  G  + +   +  GK K
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK 252

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 40/213 (18%)
Query: 536 IGEGGYGSI---YKGLLRHMQVAIKML-HPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
           IG G  G +   Y  +L    VAIK L  P   Q  ++   +E+ ++  + H N++ L+ 
Sbjct: 32  IGSGAQGIVCAAYDAILER-NVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 591 ACPEVWTLVYEYLPNGSLED----RLSCKDNSPPLSWQTRIRIATELCSVLIF------- 639
                      + P  SLE+     +  +     LS   ++ +  E  S L++       
Sbjct: 91  V----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 640 -LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            LHS     I+H DLKP+NI++ ++   K+ DFG++R            T    T    T
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFMMTPYVVT 188
Query: 699 FAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
             Y  PE +         D++S G+I+  ++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP- 561
           S   P F+    + +  E+     N  P   +G G YGS+         ++VA+K L   
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           D G++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DGGLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG-----PSEFQQEIDILSKIRHPNLVTL 588
           IG+G +  + + + R    Q A+K++              + ++E  I   ++HP++V L
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-LCSVLIFLHSCKP 645
           +       +  +V+E++    L   +  + ++  +  +    +A+  +  +L  L  C  
Sbjct: 92  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA---VASHYMRQILEALRYCHD 148
Query: 646 HSIVHGDLKPANILLDANFVS---KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           ++I+H D+KP  +LL +   S   KL  FG++  L ++ + +            GT  +M
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV--------GTPHFM 200
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLK 751
            PE +         DV+  G+IL  LL+G  P  G  + +   +  GK K
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK 250

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 51/221 (23%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLH----------PHSLQGPSE----------FQQE 573
           +G GG+GS+Y G+    ++ VAIK +           P+  + P E          F   
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 574 IDILSKIRHPNLVTLVGACPEVWTLVYEYLP-NGSLEDRLSCKDNSPPLSWQTRIRIATE 632
           I +L     P+   L+    E    +++++   G+L++ L+         WQ        
Sbjct: 76  IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARS-----FFWQ-------- 122
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCC 691
              VL  +  C    ++H D+K  NIL+D N    KL DFG    L              
Sbjct: 123 ---VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------V 169
Query: 692 RTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTG 731
            TD  GT  Y  PE++       +S  V+S GI+L  ++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHP 583
           T  ++    IG G Y    + + +  + + A+K++   S + P+E   EI+IL +  +HP
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK-SKRDPTE---EIEILLRYGQHP 76
Query: 584 NLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N++TL  V    +   +V E    G L D++         S +    +   +   + +LH
Sbjct: 77  NIITLKDVYDDGKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITKTVEYLH 133
Query: 642 SCKPHSIVHGDLKPANILL---DANFVS-KLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
           +     +VH DLKP+NIL      N  S ++ DFG ++     ++ + N  L     P  
Sbjct: 134 A---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLRAENGLLXT---PCY 182
Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           T  ++ PE L         D++S G++L   LTG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLC 690
           +L   + F+HS     I H D+KP N+L+++ +   KL DFG ++ L  +E S     +C
Sbjct: 149 QLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV--AXIC 203
Query: 691 CRTDPKGTFAYMDPEF-LASGELTPKSDVYSFGIILLRLLTGRPAL 735
            R        Y  PE  L + E TP  D++S G +   L+ G+P  
Sbjct: 204 SR-------FYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 509 SHM-PQFFS----DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKML-H 560
           SHM  QF+S    D +F+ ++     +     IG G  G +      +  + VA+K L  
Sbjct: 2   SHMDSQFYSVQVADSTFTVLK----RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR 57
Query: 561 PHSLQGPSE-FQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLED----RLSCK 615
           P   Q  ++   +E+ +L  + H N+++L+            + P  +LE+     L  +
Sbjct: 58  PFQNQTHAKRAYRELVLLKCVNHKNIISLLNV----------FTPQKTLEEFQDVYLVME 107
Query: 616 DNSPPLSWQTRIRIATELCSVLIFLHSC---KPHS--IVHGDLKPANILLDANFVSKLSD 670
                L     + +  E  S L++   C     HS  I+H DLKP+NI++ ++   K+ D
Sbjct: 108 LMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 167
Query: 671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
           FG++R  S N + +             T  Y  PE +         D++S G I+  L+ 
Sbjct: 168 FGLARTASTNFMMTPYVV---------TRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 218
Query: 731 G 731
           G
Sbjct: 219 G 219

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 508 SSHMPQFFS---DFSFSEIEGATHNFDPSLKIGEGGYGSI---YKGLLRHMQVAIKMLHP 561
           S   P F+    + +  E+     N  P   +G G YGS+   +     H     K+  P
Sbjct: 2   SQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRP 58
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL-----VY--EYLPNGSLEDRLS 613
             S+       +E+ +L  ++H N++ L+       +L     VY   +L    L + + 
Sbjct: 59  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 614 CK----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           C+    D+   L +Q        +   L ++HS     I+H DLKP+N+ ++ +   K+ 
Sbjct: 119 CQKLTDDHVQFLIYQ--------ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 167
Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL 729
           DF ++R  + +E++    T   R  P+    +M              D++S G I+  LL
Sbjct: 168 DFYLARH-TDDEMTGYVATRWYRA-PEIMLNWM--------HYNQTVDIWSVGCIMAELL 217
Query: 730 TGR 732
           TGR
Sbjct: 218 TGR 220

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 50/246 (20%)
Query: 529 NFDPSLK---IGEG--GYGS----IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           NF+ SLK   + E   GYGS    +++G  +   VA+K +    +        EI +L++
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTE 64
Query: 580 IR-HPNLVTLVGACPEV---WTLVYEYLPNGSLEDRLSCKDNSPP-LSWQTR---IRIAT 631
              HPN++     C E    +  +   L N +L+D +  K+ S   L  Q     I +  
Sbjct: 65  SDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------------NFVSKLSDFGISRFLS 678
           ++ S +  LHS K   I+H DLKP NIL+               N    +SDFG+ + L 
Sbjct: 123 QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-------LTPKSDVYSFGIILLRLLT- 730
             + SS  T L    +P GT  +  PE L           LT   D++S G +   +L+ 
Sbjct: 180 SGQ-SSFRTNL---NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 731 GRPALG 736
           G+   G
Sbjct: 236 GKHPFG 241

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   NILL    V K+ DFG++R + +      +     + D +    +M PE + 
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYK------DPDYVRKGDARLPLKWMAPETIF 275
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
               T +SDV+SFG++L  + +
Sbjct: 276 DRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   NILL    V K+ DFG++R + ++           + D +    +M PE + 
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIF 268
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
               T +SDV+SFG++L  + +
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIFS 290

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   NILL    V K+ DFG++R + +      +     + D +    +M PE + 
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYK------DPDYVRKGDARLPLKWMAPETIF 273
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
               T +SDV+SFG++L  + +
Sbjct: 274 DRVYTIQSDVWSFGVLLWEIFS 295

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DL   NILL    V K+ DFG++R + ++           + D +    +M PE + 
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIF 266
Query: 709 SGELTPKSDVYSFGIILLRLLT 730
               T +SDV+SFG++L  + +
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIFS 288

>pdb|2C2L|A Chain A, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 819 PPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALR 878
           P Y    I  E+M++P +   G TY+ + ++  L      +P+T  PL  + L+PNLA++
Sbjct: 206 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMK 265
Query: 879 SAIQEWLQQH 888
             I  ++ ++
Sbjct: 266 EVIDAFISEN 275

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEF-----QQEIDILSKIRHPNLVTL 588
           +G G YGS+   + +    +VAIK L   S    SE       +E+ +L  ++H N++ L
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 589 VGACPEVWTL-----VYEYLP--NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           +       +L      Y  +P     L+  +  K +   + +     +  ++   L ++H
Sbjct: 89  LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH 143
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S     +VH DLKP N+ ++ +   K+ DFG++R  +  E++    T   R  P+   ++
Sbjct: 144 SA---GVVHRDLKPGNLAVNEDCELKILDFGLARH-ADAEMTGYVVTRWYRA-PEVILSW 198
Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
           M              D++S G I+  +LTG+
Sbjct: 199 M--------HYNQTVDIWSVGCIMAEMLTGK 221

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 32/209 (15%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKML-HPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
           IG G  G +      +  + VA+K L  P   Q  ++   +E+ +L  + H N+++L+  
Sbjct: 32  IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 592 CPEVWTLVYEYLPNGSLED----RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC---K 644
                     + P  +LE+     L  +     L     + +  E  S L++   C    
Sbjct: 92  ----------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKH 141
Query: 645 PHS--IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            HS  I+H DLKP+NI++ ++   K+ DFG++R    N + +             T  Y 
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV---------TRYYR 192
Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTG 731
            PE +         D++S G I+  L+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCR 692
           S+L  L +   + I+H DLKP NILL     S  K+ DFG S +  Q   +   +     
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF--- 264
Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 735
                   Y  PE +         D++S G IL  LLTG P L
Sbjct: 265 --------YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	888
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-99
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-86
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-67
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-66
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-63
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-61
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-61
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-60
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-59
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-59
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-57
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-54
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-51
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-50
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-49
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-47
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-39
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-37
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-37
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-37
1t1h_A	78	Gspef-atpub14, armadillo repeat containing protein	7e-37
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-36
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-35
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-35
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-35
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-35
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-35
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-35
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-35
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-35
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-35
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-35
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-34
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-34
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-34
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-34
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-34
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-34
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-34
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-34
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-34
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-34
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-34
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-34
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-34
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	9e-34
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-33
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-33
2f42_A	179	STIP1 homology and U-box containing protein 1; cha	1e-33
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-33
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-33
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-33
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-33
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-33
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-33
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-33
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-33
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-33
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-33
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-33
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-32
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-32
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-32
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-32
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-32
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-31
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-31
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-31
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-31
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-31
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-31
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-31
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-31
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-31
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-31
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-30
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-30
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-30
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-30
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-30
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	9e-30
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-29
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-29
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-29
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-29
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-29
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-29
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-29
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-29
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-28
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-28
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-28
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-28
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-28
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-28
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-28
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-28
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-28
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-28
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-28
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-28
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-28
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-27
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-27
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-27
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-27
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-27
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-27
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-27
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-27
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-27
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-26
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-26
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-26
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-26
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-26
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-26
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-26
2kr4_A	85	Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ri	6e-26
3fme_A	290	Dual specificity mitogen-activated protein kinase;	8e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-26
2kre_A	100	Ubiquitin conjugation factor E4 B; U-box domain, E	1e-25
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-25
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-25
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-25
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-25
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-25
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-25
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-25
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-25
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-24
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-24
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-24
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-24
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-24
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-24
1wgm_A	98	Ubiquitin conjugation factor E4A; ubiquitinating e	6e-24
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-24
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-23
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-23
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-23
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-23
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-23
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-22
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-21
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-21
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-21
2c2l_A	281	CHIP, carboxy terminus of HSP70-interacting protei	3e-21
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-21
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-20
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-20
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-19
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-19
3m62_A	968	Ubiquitin conjugation factor E4; armadillo-like re	2e-19
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-19
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-19
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-19
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-19
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-19
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-18
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-18
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-18
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-17
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-17
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-17
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-17
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-17
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-17
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-15
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-15
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-15
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-14
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-14
2yu4_A	94	E3 SUMO-protein ligase NSE2; SP-ring domain, struc	3e-14
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-13
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-11
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-11
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-11
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-10
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-10
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	9e-10
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	5e-09
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	1e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	4e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-06
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	5e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-09
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-09
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-09
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	7e-09
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	1e-07
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	1e-07
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	8e-07
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	9e-07
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	2e-06
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	6e-06
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	1e-05
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	2e-05
1c1g_A	284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	2e-04
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	7e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	7e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	5e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	8e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-07
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	5e-07
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	1e-06
2bay_A	61	PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin l	1e-06
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	3e-06
2efr_A	155	General control protein GCN4 and tropomyosin 1 Al;	6e-06
1w1w_A	430	Structural maintenance of chromosome 1; cohesin, c	1e-05
1cii_A	602	Colicin IA; bacteriocin, ION channel formation, tr	4e-05
2v71_A	189	Nuclear distribution protein NUDE-like 1; developm	4e-05
3htk_C	267	E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-	1e-04
1f5n_A	592	Interferon-induced guanylate-binding protein 1; GB	1e-04
2xs1_A	704	Programmed cell death 6-interacting protein; prote	2e-04
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	2e-04
2fxo_A	129	Myosin heavy chain, cardiac muscle beta isoform; c	3e-04
3qwe_A	279	GMIP, GEM-interacting protein; structural genomics	3e-04
3na7_A	256	HP0958; flagellar biogenesis, flagellum export, C4	4e-04
4f61_I	240	Stathmin-like domain R4; alpha-tubulin, beta-tubul	5e-04
3auy_A	371	DNA double-strand break repair RAD50 ATPase; DNA r	5e-04
2v0o_A	276	FCHO2, FCH domain only protein 2; lipid-binding pr	6e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  311 bits (799), Expect = 3e-99
 Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 31/314 (9%)

Query: 501 SRKEASSSSHMPQFFS-DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKM 558
           S  +A SSS++  F S      ++E AT+NFD    IG G +G +YKG+LR   +VA+K 
Sbjct: 11  SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70

Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKD 616
             P S QG  EF+ EI+ LS  RHP+LV+L+G C E     L+Y+Y+ NG+L+  L   D
Sbjct: 71  RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130

Query: 617 N-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 675
             +  +SW+ R+ I       L +LH+    +I+H D+K  NILLD NFV K++DFGIS+
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK 187

Query: 676 FLSQNE---ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
             ++ +   +S         T  KGT  Y+DPE+   G LT KSDVYSFG++L  +L  R
Sbjct: 188 KGTELDQTHLS---------TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238

Query: 733 PALGITKE------VQYA---LDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRK 782
            A+  +         ++A    + G+L+ ++DP LA         +  + A++C  +S +
Sbjct: 239 SAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298

Query: 783 SRPELGKDVWRVLE 796
            RP +G DV   LE
Sbjct: 299 DRPSMG-DVLWKLE 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  309 bits (794), Expect = 1e-98
 Identities = 114/304 (37%), Positives = 171/304 (56%), Gaps = 31/304 (10%)

Query: 518 FSFSEIEGATHNFDPSL------KIGEGGYGSIYKGLLRHMQVAIKMLHPH----SLQGP 567
           FSF E++  T+NFD         K+GEGG+G +YKG + +  VA+K L       + +  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74

Query: 568 SEFQQEIDILSKIRHPNLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQT 625
            +F QEI +++K +H NLV L+G   +     LVY Y+PNGSL DRLSC D +PPLSW  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134

Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
           R +IA    + + FLH    +  +H D+K ANILLD  F +K+SDFG++R   +   +  
Sbjct: 135 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191

Query: 686 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
            + +       GT AYM PE L  GE+TPKSD+YSFG++LL ++TG PA+   +E Q  L
Sbjct: 192 TSRI------VGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244

Query: 746 --------DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 797
                   +   +++ +D    D      E + ++A +C    +  RP++   V ++L+ 
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK-KVQQLLQE 303

Query: 798 MRAS 801
           M AS
Sbjct: 304 MTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  277 bits (710), Expect = 4e-86
 Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 31/299 (10%)

Query: 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGP-SEFQQEID 575
           FS  E++ A+ NF     +G GG+G +YKG L     VA+K L     QG   +FQ E++
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 576 ILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATE 632
           ++S   H NL+ L G C       LVY Y+ NGS+   L    ++ PPL W  R RIA  
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139

Query: 633 LCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE--ISSNNTTL 689
               L +LH  C P  I+H D+K ANILLD  F + + DFG+++ +   +  ++      
Sbjct: 140 SARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT------ 192

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--------V 741
              T  +GT  ++ PE+L++G+ + K+DV+ +G++LL L+TG+ A  + +         +
Sbjct: 193 ---TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249

Query: 742 QYA---LDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 796
            +    L   KL+ L+D  L G++   + EQL  +A+ C + S   RP++  +V R+LE
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS-EVVRMLE 307

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  225 bits (576), Expect = 3e-67
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 21/273 (7%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
            +G G +G + K   R   VAIK +   S +    F  E+  LS++ HPN+V L GAC  
Sbjct: 15  VVGRGAFGVVCKAKWRAKDVAIKQIESESERK--AFIVELRQLSRVNHPNIVKLYGACLN 72

Query: 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654
              LV EY   GSL + L   +  P  +    +    +    + +LHS +P +++H DLK
Sbjct: 73  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132

Query: 655 PANILLDANF-VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT 713
           P N+LL A   V K+ DFG +  +  +            T+ KG+ A+M PE       +
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTH-----------MTNNKGSAAWMAPEVFEGSNYS 181

Query: 714 PKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 772
            K DV+S+GIIL  ++T R P   I       +          PL  + P    + + +L
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-NGTRPPLIKNLP----KPIESL 236

Query: 773 AMRCCEMSRKSRPELGKDVWRVLEPMRASCGGS 805
             RC       RP + +++ +++  +     G+
Sbjct: 237 MTRCWSKDPSQRPSM-EEIVKIMTHLMRYFPGA 268

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  222 bits (569), Expect = 3e-66
 Identities = 83/315 (26%), Positives = 134/315 (42%), Gaps = 21/315 (6%)

Query: 492 VKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH 551
           +K              ++    F       +++    + +   KIG G +G++++     
Sbjct: 1   MKHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG 60

Query: 552 MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGS 607
             VA+K+L           EF +E+ I+ ++RHPN+V  +GA   P   ++V EYL  GS
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120

Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
           L   L        L  + R+ +A ++   + +LH+  P  IVH +LK  N+L+D  +  K
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVK 179

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           + DFG+SR  +   +SS            GT  +M PE L       KSDVYSFG+IL  
Sbjct: 180 VCDFGLSRLKASTFLSS--------KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231

Query: 728 LLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 786
           L T + P   +    Q     G  K     +  +       Q+A +   C       RP 
Sbjct: 232 LATLQQPWGNLN-PAQVVAAVGF-KCKRLEIPRNLN----PQVAAIIEGCWTNEPWKRPS 285

Query: 787 LGKDVWRVLEPMRAS 801
               +  +L P+  S
Sbjct: 286 F-ATIMDLLRPLIKS 299

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  214 bits (546), Expect = 7e-63
 Identities = 67/319 (21%), Positives = 115/319 (36%), Gaps = 53/319 (16%)

Query: 501 SRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLH 560
                 SS        D     +   +           G +G ++K  L +  VA+K+  
Sbjct: 3   HHHHHHSSG------VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFP 56

Query: 561 PHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWT---LVYEYLPNGSLEDRLSC 614
               Q   + + E+  L  ++H N++  +GA      V     L+  +   GSL D L  
Sbjct: 57  IQDKQS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-- 113

Query: 615 KDNSPPLSWQTRIRIATELCSVLIFLHS--------CKPHSIVHGDLKPANILLDANFVS 666
              +  +SW     IA  +   L +LH          KP  I H D+K  N+LL  N  +
Sbjct: 114 --KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTA 170

Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSF 721
            ++DFG++      + + +           GT  YM PE L        +   + D+Y+ 
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQV------GTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224

Query: 722 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 781
           G++L  L +   A     + +Y L         + +                M+   + +
Sbjct: 225 GLVLWELASRCTAADGPVD-EYML------PFEEEIGQHPSLED--------MQEVVVHK 269

Query: 782 KSRPELGKDVWRVLEPMRA 800
           K RP L +D W+    M  
Sbjct: 270 KKRPVL-RDYWQKHAGMAM 287

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  208 bits (531), Expect = 2e-61
 Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 36/279 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS----EFQQEIDILSKIRHPNLVTLVG 590
            IG GG+G +Y+      +VA+K       +  S      +QE  + + ++HPN++ L G
Sbjct: 14  IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
            C       LV E+   G L   LS K     +     +  A ++   + +LH      I
Sbjct: 74  VCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPI 129

Query: 649 VHGDLKPANILLD--------ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           +H DLK +NIL+         +N + K++DFG++R   +    S            G +A
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA----------AGAYA 179

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAG 759
           +M PE + +   +  SDV+S+G++L  LLTG  P  GI   +  A        L  P+  
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-GLAVAYGVAM-NKLALPIPS 237

Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
             P    E  A L   C      SRP    ++   L  +
Sbjct: 238 TCP----EPFAKLMEDCWNPDPHSRPSF-TNILDQLTTI 271

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  207 bits (528), Expect = 9e-61
 Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 26/273 (9%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
           +IG G +G++YKG   H  VA+KML+  +        F+ E+ +L K RH N++  +G  
Sbjct: 31  RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89

Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
                 +V ++    SL   L    +      +  I IA +    + +LH+     I+H 
Sbjct: 90  TAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DLK  NI L  +   K+ DFG++   S+   S             G+  +M PE +   +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ------LSGSILWMAPEVIRMQD 198

Query: 712 LTP---KSDVYSFGIILLRLLTGR-PALGIT--KEVQYALDTGKLKNLLDPLAGDWPFVQ 765
             P   +SDVY+FGI+L  L+TG+ P   I    ++   +  G L   L  +  + P   
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP--- 255

Query: 766 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
            +++  L   C +  R  RP     +   +E +
Sbjct: 256 -KRMKRLMAECLKKKRDERPSF-PRILAEIEEL 286

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  204 bits (521), Expect = 8e-60
 Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 38/282 (13%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS-------EFQQEIDILSKIRHPNL 585
           +IG+GG+G ++KG  +     VAIK L     +G +       EFQ+E+ I+S + HPN+
Sbjct: 26  QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85

Query: 586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           V L G       +V E++P G L  RL   D + P+ W  ++R+  ++   + ++ +  P
Sbjct: 86  VKLYGLMHNPPRMVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143

Query: 646 HSIVHGDLKPANILLD-----ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
             IVH DL+  NI L      A   +K++DFG+S+        S ++     +   G F 
Sbjct: 144 -PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-------SVHSV----SGLLGNFQ 191

Query: 701 YMDPEFLASGEL--TPKSDVYSFGIILLRLLTGR-PALGIT-KEVQYALDTGKLKNLLDP 756
           +M PE + + E   T K+D YSF +IL  +LTG  P    +  ++++     + + L   
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRPT 250

Query: 757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
           +  D P     +L N+   C     K RP     + + L  +
Sbjct: 251 IPEDCP----PRLRNVIELCWSGDPKKRPHF-SYIVKELSEL 287

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  205 bits (523), Expect = 1e-59
 Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 20/281 (7%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
            +G+G +G   K   R     + +K L     +    F +E+ ++  + HPN++  +G  
Sbjct: 17  VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              +    + EY+  G+L   +  K       W  R+  A ++ S + +LHS     I+H
Sbjct: 77  YKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIH 131

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK------GTFAYMDP 704
            DL   N L+  N    ++DFG++R +   +          + D K      G   +M P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           E +       K DV+SFGI+L  ++    A                  L      + P  
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP-- 249

Query: 765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGS 805
                  + +RCC++  + RP     +   LE +R    G 
Sbjct: 250 --PSFFPITVRCCDLDPEKRPSF-VKLEHWLETLRMHLAGH 287

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  201 bits (513), Expect = 3e-58
 Identities = 58/279 (20%), Positives = 109/279 (39%), Gaps = 33/279 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
            IG+G +G +Y G   H +VAI+++            F++E+    + RH N+V  +GAC
Sbjct: 40  LIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
             P    ++       +L   +  +D    L      +IA E+   + +LH+     I+H
Sbjct: 99  MSPPHLAIITSLCKGRTLYSVV--RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLK  N+  D   V  ++DFG+       +       L       G   ++ PE +   
Sbjct: 154 KDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKL---RIQNGWLCHLAPEIIRQL 209

Query: 711 EL---------TPKSDVYSFGIILLRLLTGR-PALGITKE-VQYALDTGKLKNLLDPLAG 759
                      +  SDV++ G I   L     P      E + + + TG      +    
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM---KPNLSQI 266

Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
                  ++++++ + C    ++ RP     +  +LE +
Sbjct: 267 GMG----KEISDILLFCWAFEQEERPTF-TKLMDMLEKL 300

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  197 bits (502), Expect = 3e-57
 Identities = 51/275 (18%), Positives = 108/275 (39%), Gaps = 32/275 (11%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
           K+ E   G ++KG  +   + +K+L           +F +E   L    HPN++ ++GAC
Sbjct: 17  KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76

Query: 593 --PEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
             P       +  ++P GSL + L  +  +  +     ++ A ++   + FLH+ +P  I
Sbjct: 77  QSPPAPHPTLITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEP-LI 134

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL- 707
               L   ++++D +  +++S   +                          A++ PE L 
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQS-------------PGRMYAPAWVAPEALQ 181

Query: 708 --ASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
                     +D++SF ++L  L+T   P   ++  ++  +    L+ L   +       
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-NMEIGMKVA-LEGLRPTIPPGIS-- 237

Query: 765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 799
               ++ L   C       RP+    +  +LE M+
Sbjct: 238 --PHVSKLMKICMNEDPAKRPKF-DMIVPILEKMQ 269

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  190 bits (483), Expect = 5e-54
 Identities = 65/248 (26%), Positives = 96/248 (38%), Gaps = 31/248 (12%)

Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI 576
           + + SE      N      IG G YG++YKG L    VA+K+    + Q    F  E +I
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ---NFINEKNI 58

Query: 577 --LSKIRHPNLVTLVGAC--------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
             +  + H N+   +            E   LV EY PNGSL   L    +     W + 
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYL-LVMEYYPNGSLXKYL----SLHTSDWVSS 113

Query: 627 IRIATELCSVLIFLHSCKPHS------IVHGDLKPANILLDANFVSKLSDFGISRFLSQN 680
            R+A  +   L +LH+  P        I H DL   N+L+  +    +SDFG+S  L+ N
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173

Query: 681 EISSNNTTLCCRTDPKGTFAYMDPEFL-------ASGELTPKSDVYSFGIILLRLLTGRP 733
            +              GT  YM PE L              + D+Y+ G+I   +     
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233

Query: 734 ALGITKEV 741
            L   + V
Sbjct: 234 DLFPGESV 241

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  181 bits (460), Expect = 4e-51
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC 592
            +G+G YG +++G  +   VA+K+      +    + +E ++     +RH N++  + + 
Sbjct: 15  CVGKGRYGEVWRGSWQGENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASD 71

Query: 593 -------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS--- 642
                   ++W L+  Y   GSL D L        L   + +RI   + S L  LH    
Sbjct: 72  MTSRHSSTQLW-LITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126

Query: 643 ---CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
               KP +I H DLK  NIL+  N    ++D G++   SQ+     N          GT 
Sbjct: 127 GTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST----NQLDVGNNPRVGTK 181

Query: 700 AYMDPEFL------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            YM PE L         +   + D+++FG++L  +     + GI ++ +
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  176 bits (449), Expect = 2e-49
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 34/229 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC 592
           +IG+G YG ++ G  R  +VA+K+           + +E +I     +RH N++  + A 
Sbjct: 44  QIGKGRYGEVWMGKWRGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAAD 100

Query: 593 -------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS--- 642
                   +++ L+ +Y  NGSL D L     S  L  ++ +++A    S L  LH+   
Sbjct: 101 IKGTGSWTQLY-LITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155

Query: 643 ---CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
               KP +I H DLK  NIL+  N    ++D G++     +     N          GT 
Sbjct: 156 STQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT----NEVDIPPNTRVGTK 210

Query: 700 AYMDPEFLA------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
            YM PE L         +    +D+YSFG+IL  +     + GI +E Q
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  172 bits (438), Expect = 1e-47
 Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 41/284 (14%)

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEG 539
           E   L           ++L      + S S +P          I            IG+G
Sbjct: 1   EDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQE-------SIGKG 53

Query: 540 GYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC----- 592
            +G +++G  R  +VA+K+      +    + +E +I     +RH N++  + A      
Sbjct: 54  RFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNG 110

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS------CK 644
              ++W LV +Y  +GSL D L    N   ++ +  I++A    S L  LH        K
Sbjct: 111 TWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
           P +I H DLK  NIL+  N    ++D G++           +T         GT  YM P
Sbjct: 166 P-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA----TDTIDIAPNHRVGTKRYMAP 220

Query: 705 EFL------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 742
           E L         E   ++D+Y+ G++   +       GI ++ Q
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  147 bits (372), Expect = 4e-39
 Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
            +G+G   ++++G  RH       AIK+ +  S   P +   +E ++L K+ H N+V L 
Sbjct: 16  ILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73

Query: 590 GACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            A  E  T     L+ E+ P GSL   L    N+  L     + +  ++   +  L    
Sbjct: 74  -AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-- 130

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
            + IVH ++KP NI+     D   V KL+DFG +R L  +E      +L       GT  
Sbjct: 131 -NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLY------GTEE 180

Query: 701 YMDPEFLASGEL--------TPKSDVYSFGIILLRLLTGRP 733
           Y+ P+      L            D++S G+      TG  
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  141 bits (358), Expect = 2e-37
 Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 40/285 (14%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL- 588
           K+G GG  ++Y     + +++VAIK +     +       F++E+   S++ H N+V++ 
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77

Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    + + LV EY+   +L + +   ++  PLS  T I    ++   +   H      
Sbjct: 78  DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD---MR 131

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           IVH D+KP NIL+D+N   K+ DFGI++ LS+  ++  N  L       GT  Y  PE  
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-------GTVQYFSPEQA 184

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP------ALGI-TKEVQYALDTGKLKNLLDPLAGD 760
                   +D+YS GI+L  +L G P      A+ I  K +Q ++       +   +  D
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-----VTTDVRKD 239

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP----ELGKDVWRVLEPMRAS 801
            P    + L+N+ +R  E  + +R     E+  D+  VL   RA+
Sbjct: 240 IP----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  143 bits (363), Expect = 2e-37
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
           +IG G +G ++ G LR  +  VA+K           ++F QE  IL +  HPN+V L+G 
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180

Query: 592 CPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           C +   ++ +V E +  G     L  +     L  +T +++  +  + + +L S      
Sbjct: 181 CTQKQPIY-IVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES---KCC 234

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MDPEF 706
           +H DL   N L+    V K+SDFG+SR  +    +         +            PE 
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA--------ASGGLRQVPVKWTAPEA 286

Query: 707 LASGELTPKSDVYSFGIILLRLLT-GR-PALGIT-KEVQYALDTGKLKNLLDPLAGDWPF 763
           L  G  + +SDV+SFGI+L    + G  P   ++ ++ +  ++ G     L       P 
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG---GRLPC-----PE 338

Query: 764 VQAEQLANLAMRCCEMSRKSRP 785
           +  + +  L  +C       RP
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRP 360

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  143 bits (363), Expect = 3e-37
 Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
            +G+G   ++++G  RH       AIK+ +  S   P +   +E ++L K+ H N+V L 
Sbjct: 16  ILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73

Query: 590 GACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            A  E  T     L+ E+ P GSL   L    N+  L     + +  ++   +  L    
Sbjct: 74  -AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-- 130

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
            + IVH ++KP NI+     D   V KL+DFG +R L  +E      +L       GT  
Sbjct: 131 -NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLY------GTEE 180

Query: 701 YMDPEFLASGEL--------TPKSDVYSFGIILLRLLTGRP 733
           Y+ P+      L            D++S G+      TG  
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221

>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 Length = 78

 Score =  132 bits (334), Expect = 7e-37
 Identities = 31/72 (43%), Positives = 44/72 (61%)

Query: 817 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 876
           E P YF CPI  E+M+DP + + G TYE  +++ WLD+GH+T P +   L H  L PN  
Sbjct: 4   EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63

Query: 877 LRSAIQEWLQQH 888
           L+S I  W + +
Sbjct: 64  LKSLIALWCESN 75

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  138 bits (351), Expect = 3e-36
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 28/228 (12%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
            +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  
Sbjct: 22  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+G C    V  L+ + +P G L D +  +++   +  Q  +    ++   + +L     
Sbjct: 82  LLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYMD 703
             +VH DL   N+L+      K++DFG+++ L   E               G     +M 
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK--------EYHAEGGKVPIKWMA 187

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            E +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  138 bits (349), Expect = 3e-36
 Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL- 588
            +G GG G +Y+    +R   VA+K++       P      Q+E     +++ P++V + 
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100

Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
             G       +    +    L   L       PL+    + I  ++ S L   H+     
Sbjct: 101 DFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDAAHA---AG 154

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
             H D+KP NIL+ A+  + L DFGI+   +  +++    T+       GT  YM PE  
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-------GTLYYMAPERF 207

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
           +    T ++D+Y+   +L   LTG P
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSP 233

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  137 bits (346), Expect = 1e-35
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNL--VTLV 589
           +IG GG   +++ L    Q  AIK ++       +   ++ EI  L+K++  +   + L 
Sbjct: 35  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94

Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                 +   +V E   N  L   L  K     +    R      +   +  +H    H 
Sbjct: 95  DYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HG 147

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           IVH DLKPAN L+    + KL DFGI+  +  +  S    +        GT  YM PE +
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV------GTVNYMPPEAI 200

Query: 708 -----------ASGELTPKSDVYSFGIILLRLLTGRP 733
                      +  +++PKSDV+S G IL  +  G+ 
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  135 bits (342), Expect = 1e-35
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 25/214 (11%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVT 587
            IG G YG   K   R       +  K L   S+   +E Q    E+++L +++HPN+V 
Sbjct: 13  TIGTGSYGRCQKI--RRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVR 69

Query: 588 LVGACPEVWT----LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                 +       +V EY   G L   +         L  +  +R+ T+L   L   H 
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129

Query: 643 CK--PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
                H+++H DLKPAN+ LD     KL DFG++R L+ +  +S   T        GT  
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKTFV------GTPY 181

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA 734
           YM PE +       KSD++S G +L  L    P 
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  136 bits (344), Expect = 1e-35
 Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 19/208 (9%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLV 589
           KIG G +  +Y+       + VA+K +    L          +EID+L ++ HPN++   
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98

Query: 590 GACPEVWTL--VYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            +  E   L  V E    G L   +   K     +  +T  +   +LCS L  +HS    
Sbjct: 99  ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---R 155

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            ++H D+KPAN+ + A  V KL D G+ RF         ++         GT  YM PE 
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFF--------SSKTTAAHSLVGTPYYMSPER 207

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPA 734
           +       KSD++S G +L  +   +  
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSP 235

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  136 bits (344), Expect = 2e-35
 Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 22/252 (8%)

Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVA 555
           +  S      SS   +    F    +     ++    K+GEGG+  +   +GL      A
Sbjct: 1   MGSSHHHHHHSS--GRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYA 58

Query: 556 IKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-------PEVWTLVYEYLPNGSL 608
           +K +  H  Q   E Q+E D+     HPN++ LV  C        E W L+  +   G+L
Sbjct: 59  LKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW-LLLPFFKRGTL 117

Query: 609 EDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
            + +   KD    L+    + +   +C  L  +H+       H DLKP NILL       
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPV 174

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPK--GTFAYMDPEFLAS---GELTPKSDVYSFG 722
           L D G         +  +   L  +       T +Y  PE  +      +  ++DV+S G
Sbjct: 175 LMDLGSMNQAC-IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG 233

Query: 723 IILLRLLTGRPA 734
            +L  ++ G   
Sbjct: 234 CVLYAMMFGEGP 245

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  136 bits (345), Expect = 3e-35
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNL--VTLV 589
           +IG GG   +++ L    Q  AIK ++       +   ++ EI  L+K++  +   + L 
Sbjct: 16  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75

Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                 +   +V E   N  L   L  K     +    R      +   +  +H    H 
Sbjct: 76  DYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HG 128

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           IVH DLKPAN L+    + KL DFGI+  +  +  S    +        GT  YM PE +
Sbjct: 129 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV------GTVNYMPPEAI 181

Query: 708 -----------ASGELTPKSDVYSFGIILLRLLTGRP 733
                      +  +++PKSDV+S G IL  +  G+ 
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  135 bits (341), Expect = 3e-35
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 21/207 (10%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVT 587
            +GEG +G +              QVA+K L P S     ++ ++EI+IL  + H N+V 
Sbjct: 28  DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87

Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             G C         L+ E+LP+GSL++ L    N   ++ + +++ A ++C  + +L S 
Sbjct: 88  YKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGS- 144

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                VH DL   N+L+++    K+ DFG+++ +  ++          + D      +  
Sbjct: 145 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK-----EYYTVKDDRDSPVFWYA 197

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT 730
           PE L   +    SDV+SFG+ L  LLT
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  134 bits (340), Expect = 4e-35
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+               VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76

Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L +  
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-----EFFKVKEPGESPIFWYAP 186

Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  134 bits (340), Expect = 4e-35
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 24/223 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNL 585
           +F+P   +G GG+G +++   +      AIK +  P+      +  +E+  L+K+ HP +
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65

Query: 586 VTLVGACPEVWT--------------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
           V    A  E  T              +  +     +L+D ++ +           + I  
Sbjct: 66  VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE----ISSNNT 687
           ++   + FLHS     ++H DLKP+NI    + V K+ DFG+   + Q+E    + +   
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182

Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 730
                T   GT  YM PE +     + K D++S G+IL  LL 
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  135 bits (341), Expect = 5e-35
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+               VA+K L   + +   +F++EI+IL  ++H N+V  
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107

Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G C         L+ EYLP GSL D L  + +   +     ++  +++C  + +L +  
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 163

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   NIL++     K+ DFG+++ L Q++          +   +    +  P
Sbjct: 164 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-----EYYKVKEPGESPIFWYAP 217

Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L   + +  SDV+SFG++L  L T
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  135 bits (341), Expect = 6e-35
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
           ++G+G +GS+               VA+K L         +FQ+EI IL  +    +V  
Sbjct: 30  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89

Query: 589 VGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            G           LV EYLP+G L D L  + +   L     +  ++++C  + +L S  
Sbjct: 90  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS-- 145

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               VH DL   NIL+++    K++DFG+++ L  ++          R   +    +  P
Sbjct: 146 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-----DYYVVREPGQSPIFWYAP 199

Query: 705 EFLASGELTPKSDVYSFGIILLRLLT 730
           E L+    + +SDV+SFG++L  L T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  135 bits (342), Expect = 6e-35
 Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 24/235 (10%)

Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL 564
            SS +     +  F  +E     +    KIGEG +G            Q  IK +   S 
Sbjct: 7   HSSGVDLGTENLYFQSME----KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISR 61

Query: 565 QGPSEFQ---QEIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP 619
               E +   +E+ +L+ ++HPN+V    +  E  +L  V +Y   G L  R++      
Sbjct: 62  MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN-AQKGV 120

Query: 620 PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 679
                  +    ++C  L  +H  K   I+H D+K  NI L  +   +L DFGI+R L+ 
Sbjct: 121 LFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177

Query: 680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA 734
                            GT  Y+ PE   +     KSD+++ G +L  L T + A
Sbjct: 178 T--VELARACI------GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  132 bits (335), Expect = 9e-35
 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 23/222 (10%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +IG G +G ++ G      +VAIK +   ++    +F +E +++ K+ HP LV L G C 
Sbjct: 15  EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 73

Query: 594 E---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           E   +  LV E++ +G L D L  +      + +T + +  ++C  + +L       ++H
Sbjct: 74  EQAPIC-LVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 127

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNE-ISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
            DL   N L+  N V K+SDFG++RF+  ++  SS  T    +        +  PE  + 
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSF 179

Query: 710 GELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
              + KSDV+SFG+++  + +    P    +  EV   + TG
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  136 bits (343), Expect = 1e-34
 Identities = 64/281 (22%), Positives = 103/281 (36%), Gaps = 41/281 (14%)

Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHN---FDPS 533
           +        + R   +KE    +  R+   S           S S  E  +     +   
Sbjct: 2   HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSIL 61

Query: 534 LKIGEGGYGSIYKGLLRHMQ-VAIKM-----LHPHSLQGPSEFQQEIDILSKIRHPNL-- 585
            +IG GG   +++ L    Q  AIK          +L     ++ EI  L+K++  +   
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKI 118

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           + L       +   +V E   N  L   L  K     +    R      +   +  +H  
Sbjct: 119 IRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ- 173

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             H IVH DLKPAN L+    + KL DFGI+  +  +  S    +        G   YM 
Sbjct: 174 --HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV------GAVNYMP 224

Query: 704 PEFL-----------ASGELTPKSDVYSFGIILLRLLTGRP 733
           PE +           +  +++PKSDV+S G IL  +  G+ 
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  137 bits (346), Expect = 1e-34
 Identities = 72/220 (32%), Positives = 112/220 (50%), Gaps = 19/220 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L     
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249

Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E  ++ +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 250 EEPIY-IVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 357

Query: 712 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            T KSDV+SFGI+L  L T    P  G+  +EV   ++ G
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  140 bits (354), Expect = 1e-34
 Identities = 65/286 (22%), Positives = 99/286 (34%), Gaps = 52/286 (18%)

Query: 535 KIGEGGYGSIYKGL---LRHMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL-- 588
            I  GG G IY  L   +    V +K L              E   L+++ HP++V +  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 589 VGACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                +        +V EY+   SL+           L     I    E+   L +LHS 
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHS- 200

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               +V+ DLKP NI+L    + KL D G         I+S            GT  +  
Sbjct: 201 --IGLVYNDLKPENIMLTEEQL-KLIDLGAVS-----RINSFGYLY-------GTPGFQA 245

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 763
           PE +     T  +D+Y+ G  L  L    P              G+    +D L  D P 
Sbjct: 246 PE-IVRTGPTVATDIYTVGRTLAALTLDLPT-----------RNGR---YVDGLPEDDPV 290

Query: 764 VQA-EQLANLAMRCCEMSRKSRP----ELGKDVWRVLEPMRASCGG 804
           ++  +    L  R  +   + R     E+   +  VL  + A   G
Sbjct: 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTG 336

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  131 bits (332), Expect = 2e-34
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 23/222 (10%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  +    VA+KM+   S+    EF QE   + K+ HP LV   G C 
Sbjct: 15  ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS 73

Query: 594 E---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           +   ++ +V EY+ NG L + L  + +   L     + +  ++C  + FL S   H  +H
Sbjct: 74  KEYPIY-IVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIH 127

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNE-ISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
            DL   N L+D +   K+SDFG++R++  ++ +SS  T    +        +  PE    
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK--------WSAPEVFHY 179

Query: 710 GELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            + + KSDV++FGI++  + +    P    T  EV   +  G
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  137 bits (346), Expect = 2e-34
 Identities = 63/222 (28%), Positives = 116/222 (52%), Gaps = 21/222 (9%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 285

Query: 593 PE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                 + ++ E++  G+L D L  + N   +S    + +AT++ S + +L      + +
Sbjct: 286 TREPPFY-IITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEK---KNFI 340

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H +L   N L+  N + K++DFG+SR ++ +  ++           K    +  PE LA 
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-------HAGAKFPIKWTAPESLAY 393

Query: 710 GELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            + + KSDV++FG++L  + T    P  GI   +V   L+  
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  139 bits (351), Expect = 3e-34
 Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 32/216 (14%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
           ++G GG+G + +    H     QVAIK           E +  EI I+ K+ HPN+V+  
Sbjct: 21  RLGTGGFGYVLRW--IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78

Query: 590 GACPEVWT---------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
              P+            L  EY   G L   L+  +N   L       + +++ S L +L
Sbjct: 79  -EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137

Query: 641 HSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
           H    + I+H DLKP NI+L       + K+ D G ++ L Q E+    T         G
Sbjct: 138 HE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFV------G 185

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T  Y+ PE L   + T   D +SFG +    +TG  
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  135 bits (343), Expect = 4e-34
 Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 29/223 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
            IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G    
Sbjct: 200 TIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
               ++ +V EY+  GSL D L        L     ++ + ++C  + +L     ++ VH
Sbjct: 258 EKGGLY-IVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MDPEFLA 708
            DL   N+L+  + V+K+SDFG+++  S              T   G        PE L 
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEAS-------------STQDTGKLPVKWTAPEALR 359

Query: 709 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
             + + KSDV+SFGI+L  + +    P   I  K+V   ++ G
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 402

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  131 bits (332), Expect = 4e-34
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 26/210 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
           +IG G + ++YKGL     ++VA         +      F++E ++L  ++HPN+V    
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           +            LV E + +G+L+  L        +  +       ++   L FLH+  
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHTRT 149

Query: 645 PHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           P  I+H DLK  NI +       K+ D G++     +   +            GT  +M 
Sbjct: 150 P-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV----------IGTPEFMA 198

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           PE           DVY+FG+ +L + T   
Sbjct: 199 PEMYEEK-YDESVDVYAFGMCMLEMATSEY 227

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  130 bits (330), Expect = 6e-34
 Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 19/220 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G ++ G    H +VA+K L   S+  P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 78

Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +  ++ ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H 
Sbjct: 79  QEPIY-IITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+      K++DFG++R +  NE ++       R   K    +  PE +  G 
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGT 186

Query: 712 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            T KSDV+SFGI+L  ++T    P  G+T  EV   L+ G
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  131 bits (332), Expect = 6e-34
 Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH 582
             +F+    +G+G +G + K   R+       AIK +  H+ +  S    E+ +L+ + H
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNH 61

Query: 583 PNLVTLVGA------------CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRI 627
             +V    A              +  + ++   EY  NG+L D +     +         
Sbjct: 62  QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYW 119

Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 687
           R+  ++   L ++HS     I+H DLKP NI +D +   K+ DFG+++ + ++       
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176

Query: 688 TLCCRTDPK------GTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTG 731
           +              GT  Y+  E L  +G    K D+YS GII   ++  
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  130 bits (330), Expect = 6e-34
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 25/227 (11%)

Query: 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
           +++G G +GS+ +G+ R     + VAIK+L          E  +E  I+ ++ +P +V L
Sbjct: 16  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G C    +  LV E    G L   L        +       +  ++   + +L      
Sbjct: 76  IGVCQAEALM-LVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEE---K 129

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYMDP 704
           + VH DL   N+LL     +K+SDFG+S+ L  ++               G +   +  P
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-------SYYTARSAGKWPLKWYAP 182

Query: 705 EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
           E +   + + +SDV+S+G+ +   L+   +P   +   EV   ++ G
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 229

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  135 bits (341), Expect = 7e-34
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 21/221 (9%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G G +G ++      H +VA+K + P S+     F  E +++  ++H  LV L     
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT 253

Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           +  ++ ++ E++  GSL D L   D          I  + ++   + F+      + +H 
Sbjct: 254 KEPIY-IITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHR 308

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNE-ISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           DL+ ANIL+ A+ V K++DFG++R +  NE  +        +        +  PE +  G
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAINFG 360

Query: 711 ELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
             T KSDV+SFGI+L+ ++T    P  G++  EV  AL+ G
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 401

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  132 bits (333), Expect = 7e-34
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 28/228 (12%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
            +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +P++  
Sbjct: 22  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+G C    V  L+ + +P G L D +  +++   +  Q  +    ++   + +L     
Sbjct: 82  LLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYMD 703
             +VH DL   N+L+      K++DFG+++ L   E               G     +M 
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK--------EYHAEGGKVPIKWMA 187

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            E +     T +SDV+S+G+ +  L+T   +P  GI   E+   L+ G
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  136 bits (344), Expect = 7e-34
 Identities = 72/220 (32%), Positives = 112/220 (50%), Gaps = 19/220 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           K+G+G +G ++ G      +VAIK L P ++  P  F QE  ++ K+RH  LV L     
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 332

Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E  ++ +V EY+  GSL D L   +    L     + +A ++ S + ++      + VH 
Sbjct: 333 EEPIY-IVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G 
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGR 440

Query: 712 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            T KSDV+SFGI+L  L T    P  G+  +EV   ++ G
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  130 bits (329), Expect = 9e-34
 Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 29/223 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
            IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G    
Sbjct: 28  TIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
               ++ +V EY+  GSL D L        L     ++ + ++C  + +L     ++ VH
Sbjct: 86  EKGGLY-IVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MDPEFLA 708
            DL   N+L+  + V+K+SDFG+++  S              T   G        PE L 
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEAS-------------STQDTGKLPVKWTAPEALR 187

Query: 709 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
             + + KSDV+SFGI+L  + +    P   I  K+V   ++ G
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  130 bits (329), Expect = 1e-33
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 41/227 (18%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN 584
           +F     IG GG+G ++K   +H        IK +  ++ +   + ++E+  L+K+ H N
Sbjct: 12  DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIKRV-KYNNE---KAEREVKALAKLDHVN 65

Query: 585 LVTLVGA---------------CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTR 626
           +V   G                       ++   E+   G+LE  +  K     L     
Sbjct: 66  IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLA 124

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           + +  ++   + ++HS K   +++ DLKP+NI L      K+ DFG+   L  +      
Sbjct: 125 LELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKR 178

Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T         GT  YM PE ++S +   + D+Y+ G+IL  LL    
Sbjct: 179 TRSK------GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  130 bits (329), Expect = 1e-33
 Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 23/222 (10%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           ++G G +G +  G  R    VAIKM+   S+    EF +E  ++  + H  LV L G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89

Query: 594 E---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           +   ++ ++ EY+ NG L + L  ++       Q  + +  ++C  + +L S      +H
Sbjct: 90  KQRPIF-IITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNE-ISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
            DL   N L++   V K+SDFG+SR++  +E  SS  +    R        +  PE L  
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR--------WSPPEVLMY 195

Query: 710 GELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            + + KSD+++FG+++  + +    P    T  E    +  G
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237

>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C Length = 179

 Score =  126 bits (318), Expect = 1e-33
 Identities = 22/77 (28%), Positives = 40/77 (51%)

Query: 812 SEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNL 871
             ++ E P Y    I  E+M++P +   G TY+ + ++  L       P+T  PL    L
Sbjct: 97  KRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQL 156

Query: 872 VPNLALRSAIQEWLQQH 888
           +PNLA++  I  ++Q++
Sbjct: 157 IPNLAMKEVIDAFIQEN 173

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  130 bits (328), Expect = 1e-33
 Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 25/224 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G YG +Y+G+ +   + VA+K L   +++   EF +E  ++ +I+HPNLV L+G C
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78

Query: 593 PE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                 + ++ E++  G+L D L  + N   +S    + +AT++ S + +L      + +
Sbjct: 79  TREPPFY-IITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEK---KNFI 133

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MDPEFL 707
           H DL   N L+  N + K++DFG+SR ++ +  +++             F      PE L
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA---------GAKFPIKWTAPESL 184

Query: 708 ASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
           A  + + KSDV++FG++L  + T    P  GI   +V   L+  
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  129 bits (327), Expect = 2e-33
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 21/201 (10%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G         + VA+K L P  L  P    +F +E++ +  + H NL+
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84

Query: 587 TLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L G      +  +V E  P GSL DRL  + +       T  R A ++   + +L S  
Sbjct: 85  RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
               +H DL   N+LL    + K+ DFG+ R L QN+          +   K  FA+  P
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-----DHYVMQEHRKVPFAWCAP 193

Query: 705 EFLASGELTPKSDVYSFGIIL 725
           E L +   +  SD + FG+ L
Sbjct: 194 ESLKTRTFSHASDTWMFGVTL 214

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  131 bits (330), Expect = 2e-33
 Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 46/229 (20%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEF-----------------QQEIDIL 577
            + +G +  I      +   A+K      L+   +F                 + E+ I+
Sbjct: 38  TLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 578 SKIRHPNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSC-----KDNSPPLSWQTR 626
           + I++   +T       + T      ++YEY+ N S+           K+ +  +  Q  
Sbjct: 98  TDIKNEYCLTCE----GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVI 153

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
             I   + +   ++H+ K  +I H D+KP+NIL+D N   KLSDFG     S+  +    
Sbjct: 154 KCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFG----ESEYMVDKKI 207

Query: 687 TTLCCRTDPKGTFAYMDPEFLASGELT--PKSDVYSFGIILLRLLTGRP 733
                     GT+ +M PEF ++       K D++S GI L  +     
Sbjct: 208 KGSR------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  129 bits (327), Expect = 3e-33
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
            IG+G +G +Y G         +Q AIK L     +Q    F +E  ++  + HPN++ L
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87

Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           +G           ++  Y+ +G L   +  +      + +  I    ++   + +L    
Sbjct: 88  IGIMLPPEGLPH-VLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYLAE-- 142

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYM 702
               VH DL   N +LD +F  K++DFG++R +   E  S       +          + 
Sbjct: 143 -QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS------VQQHRHARLPVKWT 195

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
             E L +   T KSDV+SFG++L  LLT    P   I   ++ + L  G
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  129 bits (327), Expect = 3e-33
 Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 32/308 (10%)

Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLH 560
             S+  P+         I  ++     +  IG G +G +Y G L       +  A+K L+
Sbjct: 3   DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 62

Query: 561 P-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLEDRLSCKD 616
               +   S+F  E  I+    HPN+++L+G C            Y+ +G L + +  ++
Sbjct: 63  RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RN 120

Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 676
            +   + +  I    ++   + +L S      VH DL   N +LD  F  K++DFG++R 
Sbjct: 121 ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 177

Query: 677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPA 734
           +   E  S +     +   K    +M  E L + + T KSDV+SFG++L  L+T    P 
Sbjct: 178 MYDKEYYSVHNKTGAKLPVK----WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233

Query: 735 LGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKD 790
             +   ++   L  G     L       P    + L  + ++C     + RP   EL   
Sbjct: 234 PDVNTFDITVYLLQG---RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285

Query: 791 VWRVLEPM 798
           +  +    
Sbjct: 286 ISAIFSTF 293

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  128 bits (325), Expect = 3e-33
 Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 27/207 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +G++Y  L R  Q    +A+K+L    L+      Q   E++I S +RHPN++ L
Sbjct: 17  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 589 VG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
            G         L+ EY P G++   L           Q      TEL + L + HS    
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHS---K 128

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            ++H D+KP N+LL +    K++DFG     S +  SS  T LC      GT  Y+ PE 
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLC------GTLDYLPPEM 178

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           +       K D++S G++    L G+P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKP 205

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  129 bits (326), Expect = 5e-33
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 23/207 (11%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
            +GEG +G +               VA+K L      Q  S ++QEIDIL  + H +++ 
Sbjct: 38  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97

Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
             G C         LV EY+P GSL D L    +S  L+    +  A ++C  + +LH+ 
Sbjct: 98  YKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQL--LLFAQQICEGMAYLHAQ 153

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
                +H DL   N+LLD + + K+ DFG+++ + +            R D      +  
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH-----EYYRVREDGDSPVFWYA 205

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT 730
           PE L   +    SDV+SFG+ L  LLT
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLT 232

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  129 bits (326), Expect = 5e-33
 Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 24/226 (10%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
            +G G +G+++KG+         + V IK++      Q        +  +  + H ++V 
Sbjct: 20  VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79

Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+G CP   +  LV +YLP GSL D +  + +   L  Q  +    ++   + +L     
Sbjct: 80  LLGLCPGSSLQ-LVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYYLEE--- 133

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H +VH +L   N+LL +    +++DFG++  L  ++           ++ K    +M  E
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL------YSEAKTPIKWMALE 187

Query: 706 FLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            +  G+ T +SDV+S+G+ +  L+T    P  G+   EV   L+ G
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 233

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  127 bits (322), Expect = 6e-33
 Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 24/225 (10%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
            +GEG +G +Y+G+  +     + VA+K      +L    +F  E  I+  + HP++V L
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G   E   W ++ E  P G L   L  + N   L   T +  + ++C  + +L S    
Sbjct: 79  IGIIEEEPTW-IIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---I 132

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           + VH D+   NIL+ +    KL DFG+SR++   +    + T       +    +M PE 
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-------RLPIKWMSPES 185

Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
           +     T  SDV+ F + +  +L+   +P   +  K+V   L+ G
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  127 bits (322), Expect = 7e-33
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 24/225 (10%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
            IGEG +G +++G+        + VAIK      S     +F QE   + +  HP++V L
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G   E  VW ++ E    G L   L  +     L   + I  A +L + L +L S    
Sbjct: 82  IGVITENPVW-IIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES---K 135

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             VH D+   N+L+ +N   KL DFG+SR++  +            +  K    +M PE 
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-------ASKGKLPIKWMAPES 188

Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
           +     T  SDV+ FG+ +  +L    +P  G+   +V   ++ G
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 233

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  127 bits (322), Expect = 7e-33
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 42/238 (17%)

Query: 535 KIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
            +G+G +  I+KG+ R           +V +K+L          F +   ++SK+ H +L
Sbjct: 15  SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74

Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           V   G C    E   LV E++  GSL+  L  K N   ++   ++ +A +L + + FL  
Sbjct: 75  VLNYGVCVCGDENI-LVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEE 131

Query: 643 CKPHSIVHGDLKPANILLDA--------NFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
              ++++HG++   NILL              KLSD GIS  +   +I            
Sbjct: 132 ---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL----------- 177

Query: 695 PKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG 748
            +    ++ PE       L   +D +SFG  L  + +G  +P   +  +      +  
Sbjct: 178 -QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR 234

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  130 bits (327), Expect = 8e-33
 Identities = 46/262 (17%), Positives = 87/262 (33%), Gaps = 35/262 (13%)

Query: 498 LRKSRKEASSSSHMPQFFSDFS----FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-- 551
           L    K  SS  +  ++          +E +  +        +GEG +  +Y+       
Sbjct: 31  LSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLN 90

Query: 552 -----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604
                 +  +K+  P +        Q ++ L        +    A        LV E   
Sbjct: 91  DAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYS 150

Query: 605 NGSLEDRLSCKDNSP--PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662
            G+L + ++   N+P   +     I  A  +  ++  +H C+   I+HGD+KP N +L  
Sbjct: 151 YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGN 207

Query: 663 NFVS-----------KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
            F+             L D G S  +      +  T  C       T  +   E L++  
Sbjct: 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKC------ETSGFQCVEMLSNKP 261

Query: 712 LTPKSDVYSFGIILLRLLTGRP 733
              + D +     +  +L G  
Sbjct: 262 WNYQIDYFGVAATVYCMLFGTY 283

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  128 bits (325), Expect = 9e-33
 Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTL 588
            IG G  G +  G LR      + VAIK L    + +   +F  E  I+ +  HPN++ L
Sbjct: 56  IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115

Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            G          +V EY+ NGSL+  L  + +    +    + +   + + + +L     
Sbjct: 116 EGVVTRGRLAM-IVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSD--- 169

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MD 703
              VH DL   N+L+D+N V K+SDFG+SR L  +  ++  TT        G        
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT-------GGKIPIRWTA 222

Query: 704 PEFLASGELTPKSDVYSFGIIL 725
           PE +A    +  SDV+SFG+++
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVM 244

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  128 bits (323), Expect = 3e-32
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 27/228 (11%)

Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
            +G G +G +  G L     + + VAIK L   ++ +   +F  E  I+ +  HPN++ L
Sbjct: 52  VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111

Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            G   +   V  +V EY+ NGSL+  L  + +    +    + +   + S + +L     
Sbjct: 112 EGVVTKSKPVM-IVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSD--- 165

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--MD 703
              VH DL   NIL+++N V K+SDFG+ R L  +  ++  T         G        
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR-------GGKIPIRWTS 218

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
           PE +A  + T  SDV+S+GI+L  +++   RP   ++ ++V  A+D G
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  127 bits (322), Expect = 4e-32
 Identities = 68/301 (22%), Positives = 119/301 (39%), Gaps = 33/301 (10%)

Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQ 553
             +      S+  P+         I  ++     +  IG G +G +Y G L       + 
Sbjct: 60  GANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 119

Query: 554 VAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLE 609
            A+K L+    +   S+F  E  I+    HPN+++L+G C            Y+ +G L 
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179

Query: 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
           + +  ++ +   + +  I    ++   + FL S      VH DL   N +LD  F  K++
Sbjct: 180 NFI--RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVA 234

Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLR 727
           DFG++R +   E  S                  +M  E L + + T KSDV+SFG++L  
Sbjct: 235 DFGLARDMYDKEFDS------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288

Query: 728 LLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR 784
           L+T    P   +   ++   L  G     L       P    + L  + ++C     + R
Sbjct: 289 LMTRGAPPYPDVNTFDITVYLLQG---RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMR 340

Query: 785 P 785
           P
Sbjct: 341 P 341

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  126 bits (318), Expect = 5e-32
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 30/214 (14%)

Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
            +G GG   ++        R   VA+K+L     + PS    F++E    + + HP +V 
Sbjct: 19  ILGFGGMSEVHLARDLRDHR--DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76

Query: 588 L------VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           +            +  +V EY+   +L D +       P++ +  I +  + C  L F H
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSH 133

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE--ISSNNTTLCCRTDPKGTF 699
               + I+H D+KPANI++ A    K+ DFGI+R ++ +   ++     +       GT 
Sbjct: 134 Q---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-------GTA 183

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            Y+ PE      +  +SDVYS G +L  +LTG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  126 bits (319), Expect = 5e-32
 Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 25/203 (12%)

Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
            IG G +G +YKG+L+       + VAIK L    + +   +F  E  I+ +  H N++ 
Sbjct: 51  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110

Query: 588 LVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           L G   +   +  ++ EY+ NG+L+  L  ++     S    + +   + + + +L +  
Sbjct: 111 LEGVISKYKPMM-IITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYLAN-- 165

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY--M 702
             + VH DL   NIL+++N V K+SDFG+SR L  +  ++  T+        G       
Sbjct: 166 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS-------GGKIPIRWT 217

Query: 703 DPEFLASGELTPKSDVYSFGIIL 725
            PE ++  + T  SDV+SFGI++
Sbjct: 218 APEAISYRKFTSASDVWSFGIVM 240

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  126 bits (318), Expect = 6e-32
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 20/219 (9%)

Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGA 591
            + EGG+  +Y  + +    + A+K L  +  +      QE+  + K+  HPN+V    A
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 592 CPEVWT---------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                          L+   L  G L + L   ++  PLS  T ++I  + C  +  +H 
Sbjct: 95  ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK----GT 698
            KP  I+H DLK  N+LL      KL DFG +  +S     S +       + +     T
Sbjct: 155 QKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213

Query: 699 FAYMDPE---FLASGELTPKSDVYSFGIILLRLLTGRPA 734
             Y  PE     ++  +  K D+++ G IL  L   +  
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  125 bits (315), Expect = 7e-32
 Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%)

Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
           +G+G YG +Y G     Q  +AIK +     +      +EI +   ++H N+V  +G+  
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 594 EVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
           E   +    E +P GSL   L  K      + QT      ++   L +LH  +   IVH 
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHR 146

Query: 652 DLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
           D+K  N+L++  + V K+SDFG S+ L+   I+    T        GT  YM PE +  G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETF------TGTLQYMAPEIIDKG 198

Query: 711 EL--TPKSDVYSFGIILLRLLTGRP 733
                  +D++S G  ++ + TG+P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKP 223

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  131 bits (331), Expect = 8e-32
 Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 32/262 (12%)

Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
            IGEG +G +++G+        M VAIK      S     +F QE   + +  HP++V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +G   E  VW ++ E    G L   L  +     L   + I  A +L + L +L S    
Sbjct: 457 IGVITENPVW-IIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES---K 510

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             VH D+   N+L+ +N   KL DFG+SR++  +            +  K    +M PE 
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-------ASKGKLPIKWMAPES 563

Query: 707 LASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPF 763
           +     T  SDV+ FG+ +  +L    +P  G+   +V   ++ G     L       P 
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPM-----PP 615

Query: 764 VQAEQLANLAMRCCEMSRKSRP 785
                L +L  +C       RP
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRRP 637

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  124 bits (313), Expect = 1e-31
 Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 32/211 (15%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +  +Y      +     VAIKM+   ++      Q+   E+ I  +++HP+++ L
Sbjct: 19  LGKGSFAGVY--RAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76

Query: 589 VGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                  +       LV E   NG +   L  K+   P S         ++ + +++LHS
Sbjct: 77  Y----NYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLHS 130

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              H I+H DL  +N+LL  N   K++DFG++  L        + TLC      GT  Y+
Sbjct: 131 ---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--HEKHYTLC------GTPNYI 179

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE         +SDV+S G +   LL GRP
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  130 bits (329), Expect = 1e-31
 Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 19/224 (8%)

Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           ++G G +GS+ +G+ R     + VAIK+L          E  +E  I+ ++ +P +V L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 590 GAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           G C  E   LV E    G L   L        +       +  ++   + +L      + 
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEE---KNF 457

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           VH +L   N+LL     +K+SDFG+S+ L  ++     +    R+  K    +  PE + 
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADD-----SYYTARSAGKWPLKWYAPECIN 512

Query: 709 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 749
             + + +SDV+S+G+ +   L+   +P   +   EV   ++ GK
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  124 bits (314), Expect = 1e-31
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 35/215 (16%)

Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++             M VA+K L   +L    +FQ+E ++L+ ++H ++V 
Sbjct: 22  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81

Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRIATE 632
             G C +     +V+EY+ +G L   L               +     L     + IA++
Sbjct: 82  FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCR 692
           + S +++L S      VH DL   N L+ AN + K+ DFG+SR +   +          R
Sbjct: 142 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY--------YR 190

Query: 693 TDPKGTF--AYMDPEFLASGELTPKSDVYSFGIIL 725
                     +M PE +   + T +SDV+SFG+IL
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  123 bits (311), Expect = 2e-31
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 27/207 (13%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G+G +G++Y  L R  Q    +A+K+L    L+      Q   EI+I S +RHPN++ +
Sbjct: 22  LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79

Query: 589 VG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
                  +   L+ E+ P G L   L           Q       EL   L + H     
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCHE---R 133

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            ++H D+KP N+L+      K++DFG     S +  S    T+C      GT  Y+ PE 
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRTMC------GTLDYLPPEM 183

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           +       K D++  G++    L G P
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMP 210

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  126 bits (319), Expect = 3e-31
 Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 27/218 (12%)

Query: 529 NFDPSLKIGEGGYGSI-YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLV 586
           +F P   +G G  G+I Y+G+  +  VA+K + P          +E+ +L +   HPN++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI 81

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                    +   +  E     +L++ +  KD +        I +  +  S L  LHS  
Sbjct: 82  RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHS-- 136

Query: 645 PHSIVHGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
             +IVH DLKP NIL+          + +SDFG+ + L+    S +  +        GT 
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-----GTE 190

Query: 700 AYMDPEFL---ASGELTPKSDVYSFGIILLRLLT-GRP 733
            ++ PE L        T   D++S G +   +++ G  
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  124 bits (313), Expect = 3e-31
 Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 45/277 (16%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           ++GEG +G ++     +       M VA+K L   S     +FQ+E ++L+ ++H ++V 
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107

Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRL------------SCKDNSPPLSWQTRIRIATEL 633
             G C E     +V+EY+ +G L   L                   PL     + +A+++
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
            + +++L        VH DL   N L+    V K+ DFG+SR     +I S +     R 
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DIYSTDYY---RV 216

Query: 694 DPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
             +      +M PE +   + T +SDV+SFG++L  + T   +P   ++  E    +  G
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276

Query: 749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                L+      P     ++  +   C +   + R 
Sbjct: 277 ---RELER-----PRACPPEVYAIMRGCWQREPQQRH 305

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  123 bits (311), Expect = 4e-31
 Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 33/236 (13%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVT 587
            +GEG +GS+ +G L+      ++VA+K +     S +   EF  E   +    HPN++ 
Sbjct: 41  ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100

Query: 588 LVGAC----PEVWTLVY---EYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
           L+G C     +          ++  G L   L     +     +  QT ++   ++   +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L +    + +H DL   N +L  +    ++DFG+S+ +   +                
Sbjct: 161 EYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR--------IA 209

Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
                ++  E LA    T KSDV++FG+ +  + T    P  G+   E+   L  G
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  124 bits (312), Expect = 4e-31
 Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 24/252 (9%)

Query: 488 RDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG 547
              + K      ++               D+ + E     H      ++G G +G +++ 
Sbjct: 21  SSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYRE---EVHWMTHQPRVGRGSFGEVHRM 77

Query: 548 LLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEY 602
             +    Q A+K +     +      +E+   + +  P +V L GA    P V  +  E 
Sbjct: 78  KDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVN-IFMEL 131

Query: 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662
           L  GSL   +        L     +    +    L +LH+ +   I+HGD+K  N+LL +
Sbjct: 132 LEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS 185

Query: 663 NFVS-KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSF 721
           +     L DFG +  L  + +     +L       GT  +M PE +       K D++S 
Sbjct: 186 DGSRAALCDFGHALCLQPDGLG---KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242

Query: 722 GIILLRLLTGRP 733
             ++L +L G  
Sbjct: 243 CCMMLHMLNGCH 254

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  122 bits (309), Expect = 5e-31
 Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 25/226 (11%)

Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +       VA+K+L   +       E   E +++ ++ +P +V +
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 589 VGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L    +   +  +  I +  ++   + +L      +
Sbjct: 84  IGICEAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE---SN 137

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF--AYMDPE 705
            VH DL   N+LL     +K+SDFG+S+ L  +E          +    G +   +  PE
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-------NYYKAQTHGKWPVKWYAPE 190

Query: 706 FLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
            +   + + KSDV+SFG+++    +   +P  G+   EV   L+ G
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  122 bits (309), Expect = 8e-31
 Identities = 59/264 (22%), Positives = 89/264 (33%), Gaps = 43/264 (16%)

Query: 482 DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGY 541
             +   + + V    E  ++ +        P+ F   SF  +           ++G G Y
Sbjct: 21  QSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLS----------RLGHGSY 70

Query: 542 GSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQ---QEIDILSKI-RHPNLVTLVGACPEV 595
           G ++K   +      A+K       +GP +      E+    K+ +HP  V L  A    
Sbjct: 71  GEVFKVRSKEDGRLYAVKRS-MSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQA---- 125

Query: 596 WT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
           W       L  E     SL+    C+     L          +    L  LHS     +V
Sbjct: 126 WEEGGILYLQTELC-GPSLQQH--CEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLV 179

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+KPANI L      KL DFG+   L                   G   YM PE L  
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTA---GAGEVQE------GDPRYMAPELLQG 230

Query: 710 GELTPKSDVYSFGIILLRLLTGRP 733
                 +DV+S G+ +L +     
Sbjct: 231 S-YGTAADVFSLGLTILEVACNME 253

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  122 bits (309), Expect = 9e-31
 Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 42/310 (13%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
           ++G+G +G +Y+G+ +         +VAIK ++   S++   EF  E  ++ +    ++V
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91

Query: 587 TLVGACPEV--WTLVYEYLPNGSLED-------RLSCKDNSPPLSWQTRIRIATELCSVL 637
            L+G   +     ++ E +  G L+         ++      P S    I++A E+   +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L++   +  VH DL   N ++  +F  K+ DFG++R + + +          R   KG
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY--------YRKGGKG 200

Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKN 752
                +M PE L  G  T  SDV+SFG++L  + T   +P  G++ ++V   +  G    
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---G 257

Query: 753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGS 812
           LLD      P    + L  L   C + + K RP    ++   ++          S+    
Sbjct: 258 LLDK-----PDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIKEEMEPGFREVSFYYSE 311

Query: 813 EERCEPPPYF 822
           E +   P   
Sbjct: 312 ENKLPEPEEL 321

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  122 bits (307), Expect = 1e-30
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 34/237 (14%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVT 587
            +G+G +GS+ +  L+      ++VA+KML     +     EF +E   + +  HP++  
Sbjct: 30  MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89

Query: 588 LVGAC----PEVWT----LVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSV 636
           LVG       +       ++  ++ +G L   L      +N   L  QT +R   ++   
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           + +L S    + +H DL   N +L  +    ++DFG+SR +   +          R    
Sbjct: 150 MEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY--------YRQGCA 198

Query: 697 GTFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
                 ++  E LA    T  SDV++FG+ +  ++T    P  GI   E+   L  G
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  122 bits (307), Expect = 3e-30
 Identities = 43/345 (12%), Positives = 87/345 (25%), Gaps = 60/345 (17%)

Query: 484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
            +       +EA +   +  EA +++  PQ       S +            +  G    
Sbjct: 18  EEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSV 77

Query: 544 IYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGACPEVWT- 597
           ++           A+K+    +    SE     +     +++   +          +   
Sbjct: 78  VFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS 137

Query: 598 ---------------------------LVYEYLPNGSLEDRLSCKDNSP----PLSWQTR 626
                                      L+     +  LE   S  D              
Sbjct: 138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMP-AASVDLELLFSTLDFVYVFRGDEGILAL 196

Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
             +  +L  +   L S     +VHG   P N+ +  +    L D          ++ +  
Sbjct: 197 HILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALW-----KVGTRG 248

Query: 687 TTLCCRTDPKGTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLTGRPALGITKEVQYA 744
                         Y   EFL +     T   + +  G+ + R+       G+       
Sbjct: 249 PASS------VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI-- 300

Query: 745 LDTGKLKNLLDPLAGDWPFVQA----EQLANLAMRCCEMSRKSRP 785
             + K  +L  P      F       + +  L  R     R+ R 
Sbjct: 301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL 345

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  121 bits (305), Expect = 3e-30
 Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 41/273 (15%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
            +G G +G +Y+G +         +QVA+K L    S Q   +F  E  I+SK  H N+V
Sbjct: 37  GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96

Query: 587 TLVGACPEV--WTLVYEYLPNGSLED----RLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
             +G   +     ++ E +  G L+               L+    + +A ++     +L
Sbjct: 97  RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

Query: 641 HSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
                +  +H D+   N LL       V+K+ DFG++R + +            R     
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS--------YYRKGGCA 205

Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKN 752
                +M PE    G  T K+D +SFG++L  + +    P    + +EV   + +G    
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG---G 262

Query: 753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +DP     P      +  +  +C +   + RP
Sbjct: 263 RMDP-----PKNCPGPVYRIMTQCWQHQPEDRP 290

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  120 bits (303), Expect = 3e-30
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 27/208 (12%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
           +G+GG+   +   +         A K++    L  P    +   EI I   + H ++V  
Sbjct: 23  LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80

Query: 589 VGACPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            G   E    V+   E     SL +    +     L+         ++     +LH    
Sbjct: 81  HG-FFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR--- 133

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           + ++H DLK  N+ L+ +   K+ DFG++  +  +        LC      GT  Y+ PE
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLC------GTPNYIAPE 185

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L+    + + DV+S G I+  LL G+P
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKP 213

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  120 bits (303), Expect = 7e-30
 Identities = 52/246 (21%), Positives = 95/246 (38%), Gaps = 35/246 (14%)

Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----V 554
             +   A  +  +P+   D        +   +     +G+GG+   +   +         
Sbjct: 18  PGAPAAAPPAKEIPEVLVD------PRSRRRYVRGRFLGKGGFAKCF--EISDADTKEVF 69

Query: 555 AIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSL 608
           A K++    L  P    +   EI I   + H ++V   G   E    V+   E     SL
Sbjct: 70  AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG-FFEDNDFVFVVLELCRRRSL 128

Query: 609 EDRLSCKDNSPPLS-WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
            +    +     L+  + R     ++     +LH    + ++H DLK  N+ L+ +   K
Sbjct: 129 LELHKRRK---ALTEPEAR-YYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVK 181

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           + DFG++  +  +        LC      GT  Y+ PE L+    + + DV+S G I+  
Sbjct: 182 IGDFGLATKVEYD--GERKKVLC------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233

Query: 728 LLTGRP 733
           LL G+P
Sbjct: 234 LLVGKP 239

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  119 bits (301), Expect = 9e-30
 Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 39/219 (17%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
            +G G +G + +            M VA+KML P   L        E+ +LS +  H N+
Sbjct: 30  TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRL---------------SCKDNSPPLSWQTRIR 628
           V L+GAC       ++ EY   G L + L                 +D+   L  +  + 
Sbjct: 90  VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
            + ++   + FL S      +H DL   NILL    ++K+ DFG++R +  +        
Sbjct: 150 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG- 205

Query: 689 LCCRTDPKGTFAY--MDPEFLASGELTPKSDVYSFGIIL 725
                          M PE + +   T +SDV+S+GI L
Sbjct: 206 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFL 237

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  119 bits (300), Expect = 2e-29
 Identities = 71/321 (22%), Positives = 125/321 (38%), Gaps = 43/321 (13%)

Query: 490 KAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLL 549
           K ++E E   + RK   +     Q   +    + E  +       ++G G  G ++K   
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKIS-------ELGAGNGGVVFKVSH 54

Query: 550 RHMQ--VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGAC---PEVWTLVYE 601
           +     +A K++H      P+   Q   E+ +L +   P +V   GA     E+  +  E
Sbjct: 55  KPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-ICME 111

Query: 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661
           ++  GSL+  L     +  +  Q   +++  +   L +L     H I+H D+KP+NIL++
Sbjct: 112 HMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 166

Query: 662 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSF 721
           +    KL DFG+S  L     S  N+ +       GT +YM PE L     + +SD++S 
Sbjct: 167 SRGEIKLCDFGVSGQLID---SMANSFV-------GTRSYMSPERLQGTHYSVQSDIWSM 216

Query: 722 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMS- 780
           G+ L+ +  GR  +      +  L  G             P      L    M       
Sbjct: 217 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA 276

Query: 781 ---------RKSRPELGKDVW 792
                     +  P+L   V+
Sbjct: 277 IFELLDYIVNEPPPKLPSGVF 297

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  119 bits (301), Expect = 2e-29
 Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 41/273 (15%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
            +G G +G +Y+G +         +QVA+K L    S Q   +F  E  I+SK  H N+V
Sbjct: 78  GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137

Query: 587 TLVGACPEV--WTLVYEYLPNGSLEDRL----SCKDNSPPLSWQTRIRIATELCSVLIFL 640
             +G   +     ++ E +  G L+  L            L+    + +A ++     +L
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

Query: 641 HSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
                +  +H D+   N LL       V+K+ DFG++R + +            R     
Sbjct: 198 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG--------YYRKGGCA 246

Query: 698 TFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKN 752
                +M PE    G  T K+D +SFG++L  + +    P    + +EV   + +G    
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG---G 303

Query: 753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +DP     P      +  +  +C +   + RP
Sbjct: 304 RMDP-----PKNCPGPVYRIMTQCWQHQPEDRP 331

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  117 bits (295), Expect = 4e-29
 Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 40/218 (18%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
           ++GE  +G +YKG L           VAIK L          EF+ E  + ++++HPN+V
Sbjct: 16  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75

Query: 587 TLVGAC----PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRI 629
            L+G      P   ++++ Y  +G L + L               +     L     + +
Sbjct: 76  CLLGVVTKDQP--LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
             ++ + + +L S   H +VH DL   N+L+      K+SD G+ R +   +        
Sbjct: 134 VAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY------- 183

Query: 690 CCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIIL 725
             +          +M PE +  G+ +  SD++S+G++L
Sbjct: 184 -YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 220

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  118 bits (297), Expect = 4e-29
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 39/219 (17%)

Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
            +GEG +G +                + VA+KML    + +  S+   E++++  I +H 
Sbjct: 42  PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
           N++ L+GAC       ++ EY   G+L + L               +     ++++  + 
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
              +L   + +L S K    +H DL   N+L+  N V K++DFG++R ++  +     T 
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT- 217

Query: 689 LCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIIL 725
                   G     +M PE L     T +SDV+SFG+++
Sbjct: 218 -------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  117 bits (294), Expect = 5e-29
 Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 21/204 (10%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V  + + 
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               E+W +V EYL  GSL D ++       +       +  E    L FLHS   + ++
Sbjct: 87  LVGDELW-VVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVI 138

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+K  NILL  +   KL+DFG    ++  E S  +T +       GT  +M PE +  
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSTMV-------GTPYWMAPEVVTR 190

Query: 710 GELTPKSDVYSFGIILLRLLTGRP 733
               PK D++S GI+ + ++ G P
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEP 214

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  119 bits (299), Expect = 6e-29
 Identities = 32/295 (10%), Positives = 78/295 (26%), Gaps = 53/295 (17%)

Query: 482 DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSF-SEIEGATHNFDPSLKIGEGG 540
           +         V+   E  +S  ++  S+ +      F   SE+            +G+  
Sbjct: 31  ELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQED 90

Query: 541 YGSIYKG--LLRHMQVAIKML----------------------------HPHSLQGPSEF 570
             +  +           + +                             +    +    F
Sbjct: 91  PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF 150

Query: 571 QQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLEDRL----SCKDNSPPLSW 623
               D++   +   ++ +     ++W L           +L+       S       L  
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVH 210

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
             R+++  ++  +L  LH    + +VH  L+P +I+LD      L+ F            
Sbjct: 211 HARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLV-------R 260

Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRP 733
              + +                 L         +T   D ++ G+ +  +     
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  117 bits (295), Expect = 6e-29
 Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 36/238 (15%)

Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNLVTL 588
            IGEG +G + K  ++     M  AIK +    S     +F  E+++L K+  HPN++ L
Sbjct: 32  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91

Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRIATEL 633
           +GAC       L  EY P+G+L D L                  +  LS Q  +  A ++
Sbjct: 92  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
              + +L        +H DL   NIL+  N+V+K++DFG+SR   +  +      L  R 
Sbjct: 152 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG-QEVYVKKTMGRLPVR- 206

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 748
                  +M  E L     T  SDV+S+G++L  +++  G P  G+T  E+   L  G
Sbjct: 207 -------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  116 bits (294), Expect = 7e-29
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 42/245 (17%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
            +G G +G + +              VA+KML    +         E+ IL  I  H N+
Sbjct: 34  PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93

Query: 586 VTLVGACPEV---WTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRI 629
           V L+GAC +      ++ E+   G+L   L                     L+ +  I  
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           + ++   + FL S K    +H DL   NILL    V K+ DFG++R + ++         
Sbjct: 154 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-- 208

Query: 690 CCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIILLRLLT-GR---PALGITKEVQY 743
                        +M PE +     T +SDV+SFG++L  + + G    P + I +E   
Sbjct: 209 ------DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262

Query: 744 ALDTG 748
            L  G
Sbjct: 263 RLKEG 267

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  119 bits (300), Expect = 8e-29
 Identities = 58/262 (22%), Positives = 98/262 (37%), Gaps = 41/262 (15%)

Query: 535 KIGEGGYGSI-YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
            +G G  G++ ++G  +   VA+K +             EI +L++   HPN++    + 
Sbjct: 22  ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYYCSE 78

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL----CSVLIFLHSCKPH 646
                  +  E   N +L+D +  K+ S       +      L     S +  LHS    
Sbjct: 79  TTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134

Query: 647 SIVHGDLKPANILLD-------------ANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
            I+H DLKP NIL+               N    +SDFG+ + L   + S          
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL----N 190

Query: 694 DPKGTFAYMDPEFLASGE-------LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL 745
           +P GT  +  PE L           LT   D++S G +   +L+ G+   G     +  +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250

Query: 746 DTGKLKNLLDPLAGDWPFVQAE 767
             G   +L +        + AE
Sbjct: 251 IRGIF-SLDEMKCLHDRSLIAE 271

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  117 bits (294), Expect = 8e-29
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           KIGEG  G +     +H   QVA+KM+     Q       E+ I+   +H N+V +  + 
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               E+W ++ E+L  G+L D +S       L+ +    +   +   L +LH+     ++
Sbjct: 112 LVGEELW-VLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHA---QGVI 163

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+K  +ILL  +   KLSDFG    +S  ++    + +       GT  +M PE ++ 
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKSLV-------GTPYWMAPEVISR 215

Query: 710 GELTPKSDVYSFGIILLRLLTGRP 733
                + D++S GI+++ ++ G P
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEP 239

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  117 bits (296), Expect = 1e-28
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 39/219 (17%)

Query: 535 KIGEGGYGSIYKGLLR---------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
            +GEG +G +                 +VA+KML    + +  S+   E++++  I +H 
Sbjct: 76  PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 135

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
           N++ L+GAC       ++ EY   G+L + L                +    LS +  + 
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
            A ++   + +L S K    +H DL   N+L+  + V K++DFG++R +   +       
Sbjct: 196 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------ 246

Query: 689 LCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIIL 725
              +    G     +M PE L     T +SDV+SFG++L
Sbjct: 247 --YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  117 bits (295), Expect = 1e-28
 Identities = 33/288 (11%), Positives = 79/288 (27%), Gaps = 63/288 (21%)

Query: 494 EAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-- 551
            +E ++ +     S+S           SE+            +G+    +  +   +   
Sbjct: 39  TSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETG 98

Query: 552 MQVAIKML----------------------------HPHSLQGPSEFQQEIDILSKIRHP 583
               + +                             +    +    F    D++   +  
Sbjct: 99  ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158

Query: 584 NLVTLVGACPEVWTLVY---EYLPNGSLEDRL----SCKDNSPPLSWQTRIRIATELCSV 636
            ++ +     ++W L           +L+       S       L    R+++  ++  +
Sbjct: 159 KMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 218

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L  LH    + +VH  L+P +I+LD      L+ F                    R    
Sbjct: 219 LASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------RVVSS 263

Query: 697 GTFAYMDPEFLAS-----------GELTPKSDVYSFGIILLRLLTGRP 733
            +  +  PE  A              +T   D ++ G+++  +     
Sbjct: 264 VSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  115 bits (291), Expect = 1e-28
 Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 32/230 (13%)

Query: 521 SEIEGATHNFDPSL------KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ 572
            E E    + DP+       ++G+G +G +YK   +      A K++   S +   ++  
Sbjct: 6   REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65

Query: 573 EIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR- 628
           EI+IL+   HP +V L+GA     ++W ++ E+ P G+++  +   +    L+ + +I+ 
Sbjct: 66  EIEILATCDHPYIVKLLGAYYHDGKLW-IMIEFCPGGAVDAIM--LELDRGLT-EPQIQV 121

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
           +  ++   L FLHS     I+H DLK  N+L+      +L+DFG+S       +   ++ 
Sbjct: 122 VCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KTLQKRDSF 177

Query: 689 LCCRTDPKGTFAYMDPEFLASGELT-----PKSDVYSFGIILLRLLTGRP 733
           +       GT  +M PE +    +       K+D++S GI L+ +    P
Sbjct: 178 I-------GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  116 bits (293), Expect = 2e-28
 Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)

Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
            +G G +G + +            ++VA+KML              E+ I+S + +H N+
Sbjct: 53  TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATE 632
           V L+GAC       ++ EY   G L           E   +    +   S +  +  +++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE--ISSNNTTLC 690
           +   + FL S    + +H D+   N+LL    V+K+ DFG++R +  +   I   N  L 
Sbjct: 173 VAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL 725
            +        +M PE +     T +SDV+S+GI+L
Sbjct: 230 VK--------WMAPESIFDCVYTVQSDVWSYGILL 256

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  115 bits (289), Expect = 2e-28
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 22/208 (10%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
           K+G G +G ++    R   ++  IK ++    Q P E  + EI++L  + HPN++ +   
Sbjct: 29  KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                   +V E    G L +R+         LS      +  ++ + L + HS     +
Sbjct: 89  FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHV 145

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP NIL      +   K+ DFG++     +E S   T         GT  YM PE
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAA------GTALYMAPE 196

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
                ++T K D++S G+++  LLTG  
Sbjct: 197 VF-KRDVTFKCDIWSAGVVMYFLLTGCL 223

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  115 bits (290), Expect = 2e-28
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 23/206 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
            +G G +  ++    R      A+K +        S  + EI +L KI+H N+VTL    
Sbjct: 16  VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75

Query: 592 -CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                + LV + +  G L DR+  +      + +    +  ++ S + +LH    + IVH
Sbjct: 76  ESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE---NGIVH 129

Query: 651 GDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N+L    + N    ++DFG+S+      +    +T C      GT  Y+ PE L
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----STAC------GTPGYVAPEVL 179

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
           A    +   D +S G+I   LL G P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYP 205

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  119 bits (299), Expect = 2e-28
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 26/209 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLV 589
            +G+G +G +     +    + A+K++    ++  ++     +E+ +L ++ HPN++ L 
Sbjct: 33  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92

Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                   + LV E    G L D +  +      S     RI  ++ S + ++H    + 
Sbjct: 93  EFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHK---NK 146

Query: 648 IVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
           IVH DLKP N+LL     +   ++ DFG+S     ++            D  GT  Y+ P
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---------MKDKIGTAYYIAP 197

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L  G    K DV+S G+IL  LL+G P
Sbjct: 198 EVL-HGTYDEKCDVWSTGVILYILLSGCP 225

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  117 bits (294), Expect = 2e-28
 Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 32/262 (12%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
           K        + +   K  E++ K              +  +   E            ++G
Sbjct: 13  KVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILE------------ELG 60

Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--P 593
            G +G +++ + +        K ++          + EI I++++ HP L+ L  A    
Sbjct: 61  SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120

Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
               L+ E+L  G L DR++ +D    +S    I    + C  L  +H    HSIVH D+
Sbjct: 121 YEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQACEGLKHMHE---HSIVHLDI 175

Query: 654 KPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           KP NI+ +    S  K+ DFG++  L+ +EI               T  +  PE +    
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIV---KVTT------ATAEFAAPEIVDREP 226

Query: 712 LTPKSDVYSFGIILLRLLTGRP 733
           +   +D+++ G++   LL+G  
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLS 248

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  115 bits (290), Expect = 3e-28
 Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 44/224 (19%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
            +GEG +G + K    H         VA+KML    S     +   E ++L ++ HP+++
Sbjct: 30  TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL---------------------SCKDNSPPLSW 623
            L GAC       L+ EY   GSL   L                         +   L+ 
Sbjct: 90  KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
              I  A ++   + +L   K   +VH DL   NIL+      K+SDFG+SR + + +  
Sbjct: 150 GDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206

Query: 684 SNNTTLCCRTDPKGTF--AYMDPEFLASGELTPKSDVYSFGIIL 725
              +        +G     +M  E L     T +SDV+SFG++L
Sbjct: 207 VKRS--------QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  114 bits (288), Expect = 4e-28
 Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 19/211 (9%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGA 591
            IG G    +       +  +VAIK ++    Q    E  +EI  +S+  HPN+V+   +
Sbjct: 22  VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81

Query: 592 ---CPEVWTLVYEYLPNGSLED--RLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSC 643
                E+W LV + L  GS+ D  +                 IAT   E+   L +LH  
Sbjct: 82  FVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK- 139

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             +  +H D+K  NILL  +   +++DFG+S FL+      + T    R    GT  +M 
Sbjct: 140 --NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT---GGDITRNKVRKTFVGTPCWMA 194

Query: 704 PEFLASGEL-TPKSDVYSFGIILLRLLTGRP 733
           PE +        K+D++SFGI  + L TG  
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAA 225

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  114 bits (288), Expect = 4e-28
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 27/207 (13%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+GEG YGS+YK + +     VAIK +         E  +EI I+ +   P++V   G+ 
Sbjct: 36  KLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSY 93

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKPH 646
               ++W +V EY   GS+ D +  +  +  L   T   IAT        L +LH     
Sbjct: 94  FKNTDLW-IVMEYCGAGSVSDII--RLRNKTL---TEDEIATILQSTLKGLEYLHF---M 144

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
             +H D+K  NILL+    +KL+DFG++  L+ + ++  NT +       GT  +M PE 
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DTMAKRNTVI-------GTPFWMAPEV 196

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           +        +D++S GI  + +  G+P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKP 223

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  115 bits (291), Expect = 4e-28
 Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 26/271 (9%)

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF---- 530
           Q+ +   +E +     A        KS++ ++ +  +P   + F    +           
Sbjct: 30  QDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY 89

Query: 531 --DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
               +  +G G +G ++K       +++A K++    ++   E + EI +++++ H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            L  A        LV EY+  G L DR+  +  +  L+    I    ++C  +  +H   
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQ-- 205

Query: 645 PHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              I+H DLKP NIL         K+ DFG++R     E               GT  ++
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNF------GTPEFL 255

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE +    ++  +D++S G+I   LL+G  
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  118 bits (297), Expect = 5e-28
 Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
           K+G G YG +     +  H++ AIK++   S+   S     +E+ +L  + HPN++ L  
Sbjct: 44  KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                  + LV E    G L D +  +      +      I  ++ S + +LH    H+I
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHK---HNI 157

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP N+LL   + + + K+ DFG+S      +            +  GT  Y+ PE
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---------MKERLGTAYYIAPE 208

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L   +   K DV+S G+IL  LL G P
Sbjct: 209 VL-RKKYDEKCDVWSIGVILFILLAGYP 235

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  115 bits (290), Expect = 5e-28
 Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 44/224 (19%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
            +G G +G +              +QVA+KML              E+ +++++  H N+
Sbjct: 52  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSL--------------------EDRLSCKDNSPPLSW 623
           V L+GAC       L++EY   G L                    + RL  +++   L++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
           +  +  A ++   + FL        VH DL   N+L+    V K+ DFG++R +  +   
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228

Query: 684 SNNTTLCCRTDPKGTF--AYMDPEFLASGELTPKSDVYSFGIIL 725
                              +M PE L  G  T KSDV+S+GI+L
Sbjct: 229 VVRG--------NARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  114 bits (287), Expect = 5e-28
 Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 28/208 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGA 591
           KIG+G +G ++KG+    Q  VAIK++     +    + QQEI +LS+   P +    G+
Sbjct: 29  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88

Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKP 645
                ++W ++ EYL  GS  D L       PL      +IAT   E+   L +LHS   
Sbjct: 89  YLKDTKLW-IIMEYLGGGSALDLLEPG----PL---DETQIATILREILKGLDYLHS--- 137

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H D+K AN+LL  +   KL+DFG++  L+       NT +       GT  +M PE
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFV-------GTPFWMAPE 189

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +       K+D++S GI  + L  G P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEP 217

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  116 bits (292), Expect = 7e-28
 Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 38/241 (15%)

Query: 515 FSDFSFSEIEGATHNF----DPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS 568
           F D +  +              S  +G G  G +     R    +VAI+++        S
Sbjct: 118 FFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS 177

Query: 569 E--------FQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNS 618
                     + EI+IL K+ HP ++ +       + + +V E +  G L D++      
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR- 235

Query: 619 PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISR 675
             L   T      ++   + +LH    + I+H DLKP N+LL   + + + K++DFG S+
Sbjct: 236 --LKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290

Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL---TPKSDVYSFGIILLRLLTGR 732
            L +  +     TLC      GT  Y+ PE L S          D +S G+IL   L+G 
Sbjct: 291 ILGETSLM---RTLC------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341

Query: 733 P 733
           P
Sbjct: 342 P 342

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  115 bits (289), Expect = 8e-28
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 39/219 (17%)

Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
            +GEG +G +                + VA+KML    + +  S+   E++++  I +H 
Sbjct: 88  PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
           N++ L+GAC       ++ EY   G+L + L               +     ++++  + 
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
              +L   + +L S K    +H DL   N+L+  N V K++DFG++R ++  +       
Sbjct: 208 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------ 258

Query: 689 LCCRTDPKGTFA--YMDPEFLASGELTPKSDVYSFGIIL 725
              +    G     +M PE L     T +SDV+SFG+++
Sbjct: 259 --YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  115 bits (289), Expect = 1e-27
 Identities = 46/243 (18%), Positives = 80/243 (32%), Gaps = 23/243 (9%)

Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEG--GYGSIYKGLLRHMQ--VAIKM-- 558
           A    H  +       S        ++    IG+G     ++     +     V ++   
Sbjct: 2   AHHHHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN 61

Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA---CPEVWTLVYEYLPNGSLEDRLSCK 615
           L   S +  +  Q E+ +     HPN+V          E+W +V  ++  GS +D +   
Sbjct: 62  LEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW-VVTSFMAYGSAKDLICTH 120

Query: 616 DNSPPLSWQTRIRIATELCSVLI---FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 672
                      + IA  L  VL    ++H       VH  +K ++IL+  +    LS   
Sbjct: 121 FMDG----MNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLR 173

Query: 673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLT 730
            +  +  +                    ++ PE L         KSD+YS GI    L  
Sbjct: 174 SNLSMI-SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232

Query: 731 GRP 733
           G  
Sbjct: 233 GHV 235

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  118 bits (296), Expect = 1e-27
 Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 20/262 (7%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
           +K +    ++    +   +    S  +        Q++      + +    ++D   ++G
Sbjct: 107 RKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELG 166

Query: 538 EGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--P 593
            G +G +++   R      A K +           ++EI  +S +RHP LV L  A    
Sbjct: 167 TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 226

Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
               ++YE++  G L ++++ + N   +S    +    ++C  L  +H    ++ VH DL
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHE---NNYVHLDL 281

Query: 654 KPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           KP NI+      +  KL DFG++  L   +               GT  +  PE      
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSV---KVTT------GTAEFAAPEVAEGKP 332

Query: 712 LTPKSDVYSFGIILLRLLTGRP 733
           +   +D++S G++   LL+G  
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLS 354

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  113 bits (285), Expect = 1e-27
 Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 28/207 (13%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTL- 588
           IG+G +  +     RH+    +VAIK++    L   S     +E+ I+  + HPN+V L 
Sbjct: 23  IGKGNFAKVKLA--RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80

Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            V    +   L+ EY   G + D L        +  +       ++ S + + H      
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQ---KR 134

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           IVH DLK  N+LLDA+   K++DFG S   +           C      G   Y  PE  
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---AFC------GAPPYAAPELF 185

Query: 708 ASGEL--TPKSDVYSFGIILLRLLTGR 732
             G+    P+ DV+S G+IL  L++G 
Sbjct: 186 -QGKKYDGPEVDVWSLGVILYTLVSGS 211

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  111 bits (281), Expect = 2e-27
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 23/206 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
            IG G +G +   + +   ++ A K +  + ++    F+QEI+I+  + HPN++ L    
Sbjct: 16  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  LV E    G L +R+  K            RI  ++ S + + H     ++ H
Sbjct: 76  EDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHK---LNVAH 129

Query: 651 GDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            DLKP N L      +   KL DFG++      ++     T        GT  Y+ P+ L
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKV------GTPYYVSPQVL 180

Query: 708 ASGELTPKSDVYSFGIILLRLLTGRP 733
             G   P+ D +S G+++  LL G P
Sbjct: 181 -EGLYGPECDEWSAGVMMYVLLCGYP 205

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  111 bits (281), Expect = 3e-27
 Identities = 61/240 (25%), Positives = 96/240 (40%), Gaps = 66/240 (27%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEF--------------------- 570
           IG+G YG +      +       A+K+L    L   + F                     
Sbjct: 21  IGKGSYGVVKLA--YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78

Query: 571 -----QQEIDILSKIRHPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDN 617
                 QEI IL K+ HPN+V LV    EV          +V+E +  G + +  + K  
Sbjct: 79  PIEQVYQEIAILKKLDHPNVVKLV----EVLDDPNEDHLYMVFELVNQGPVMEVPTLK-- 132

Query: 618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 677
             PLS         +L   + +LH      I+H D+KP+N+L+  +   K++DFG+S   
Sbjct: 133 --PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS--- 184

Query: 678 SQNEISSNNTTL--CCRTDPKGTFAYMDPEFLASGELT---PKSDVYSFGIILLRLLTGR 732
             NE   ++  L         GT A+M PE L+           DV++ G+ L   + G+
Sbjct: 185 --NEFKGSDALLSNTV-----GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  115 bits (290), Expect = 3e-27
 Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVG 590
            +G+G +G + K   R    + A+K+++  S +    S   +E+++L K+ HPN++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                  + +V E    G L D +  +      S     RI  ++ S + ++H    H+I
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNI 142

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP NILL   + +   K+ DFG+S    QN                GT  Y+ PE
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRI------GTAYYIAPE 193

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L  G    K DV+S G+IL  LL+G P
Sbjct: 194 VL-RGTYDEKCDVWSAGVILYILLSGTP 220

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  115 bits (291), Expect = 3e-27
 Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 36/219 (16%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS-------------EFQQEIDILSK 579
           K+G G YG +     +  H + AIK++                      E   EI +L  
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102

Query: 580 IRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           + HPN++ L       + + LV E+   G L +++  +             I  ++ S +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGI 159

Query: 638 IFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +LH    H+IVH D+KP NILL   ++    K+ DFG+S F S++              
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL---RDRL---- 209

Query: 695 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             GT  Y+ PE L   +   K DV+S G+I+  LL G P
Sbjct: 210 --GTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYP 245

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  111 bits (280), Expect = 4e-27
 Identities = 56/218 (25%), Positives = 86/218 (39%), Gaps = 41/218 (18%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVT 587
           +GEG YG + +          + A+K+L    L+     +     EI +L ++RH N++ 
Sbjct: 13  LGEGSYGKVKEV--LDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 588 LVGACPEVWT--------LVYEYLPNGSLE--DRLSCKDNSPPLS-WQTRIRIATELCSV 636
           LV    +V          +V EY   G  E  D +  K         Q       +L   
Sbjct: 71  LV----DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK----RFPVCQAH-GYFCQLIDG 121

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           L +LHS     IVH D+KP N+LL      K+S  G++  L          T        
Sbjct: 122 LEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ------ 172

Query: 697 GTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLTGR 732
           G+ A+  PE     +     K D++S G+ L  + TG 
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  112 bits (282), Expect = 5e-27
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 44/224 (19%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
            IGEG +G +++              VA+KML    S    ++FQ+E  ++++  +PN+V
Sbjct: 54  DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113

Query: 587 TLVGACPEV--WTLVYEYLPNGSLEDRL---------------------SCKDNSPPLSW 623
            L+G C       L++EY+  G L + L                           PPLS 
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
             ++ IA ++ + + +L        VH DL   N L+  N V K++DFG+SR +   +  
Sbjct: 174 AEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY- 229

Query: 684 SNNTTLCCRTDPKGTF--AYMDPEFLASGELTPKSDVYSFGIIL 725
                   + D        +M PE +     T +SDV+++G++L
Sbjct: 230 -------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  111 bits (281), Expect = 5e-27
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 34/217 (15%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--------FQQEIDILSKIRHPN 584
            +G G  G +     R    +VAIK++        S          + EI+IL K+ HP 
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76

Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           ++ +       + + +V E +  G L D++        L   T      ++   + +LH 
Sbjct: 77  IIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE 132

Query: 643 CKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
              + I+H DLKP N+LL   + + + K++DFG S+ L +  +     TLC      GT 
Sbjct: 133 ---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLC------GTP 180

Query: 700 AYMDPEFLASGEL---TPKSDVYSFGIILLRLLTGRP 733
            Y+ PE L S          D +S G+IL   L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  109 bits (275), Expect = 1e-26
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 29/208 (13%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G G +G +  G   H     +VA+K+L+   ++      +   EI  L   RHP+++ L
Sbjct: 19  LGVGTFGKVKIG--EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             V + P  + +V EY+  G L D +        +      R+  ++ S + + H    H
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHR---H 130

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            +VH DLKP N+LLDA+  +K++DFG+S  +S  E      T C      G+  Y  PE 
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSC------GSPNYAAPEV 181

Query: 707 LASGEL--TPKSDVYSFGIILLRLLTGR 732
           + SG L   P+ D++S G+IL  LL G 
Sbjct: 182 I-SGRLYAGPEVDIWSCGVILYALLCGT 208

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  109 bits (275), Expect = 1e-26
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
            +G+G +G + K   R    + A+K+++  S +        +E+++L K+ HPN++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                  + +V E    G L D +  +      S     RI  ++ S + ++H    H+I
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNI 142

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH DLKP NILL   + +   K+ DFG+S    QN                GT  Y+ PE
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRI------GTAYYIAPE 193

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L  G    K DV+S G+IL  LL+G P
Sbjct: 194 VL-RGTYDEKCDVWSAGVILYILLSGTP 220

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  110 bits (277), Expect = 1e-26
 Identities = 70/246 (28%), Positives = 105/246 (42%), Gaps = 35/246 (14%)

Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPH 562
           +S    +   +   S +      F+    +G G YG +YKG  RH++     AIK++   
Sbjct: 3   ASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG--RHVKTGQLAAIKVMDVT 60

Query: 563 SLQGPSEFQQEIDILSKI-RHPNLVTLVGA---------CPEVWTLVYEYLPNGSLEDRL 612
                 E +QEI++L K   H N+ T  GA           ++W LV E+   GS+ D +
Sbjct: 61  G-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW-LVMEFCGAGSVTDLI 118

Query: 613 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 672
                +          I  E+   L  LH    H ++H D+K  N+LL  N   KL DFG
Sbjct: 119 KNTKGNTLKEEWIAY-ICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFG 174

Query: 673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-----PKSDVYSFGIILLR 727
           +S  L    +   NT +       GT  +M PE +A  E        KSD++S GI  + 
Sbjct: 175 VSAQLD-RTVGRRNTFI-------GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226

Query: 728 LLTGRP 733
           +  G P
Sbjct: 227 MAEGAP 232

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  110 bits (277), Expect = 2e-26
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
           ++G G +  + K   +   ++ A K +     +         E ++E+ IL ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           TL           L+ E +  G L D L+ K++   LS +       ++   + +LH+  
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-- 133

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              I H DLKP NI+L          KL DFG++  +           +       GT  
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIF------GTPE 183

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           ++ PE +    L  ++D++S G+I   LL+G  
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  109 bits (274), Expect = 2e-26
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
           ++G G +  + K   +    + A K +    L          E ++E++IL +IRHPN++
Sbjct: 12  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           TL           L+ E +  G L D L+ K++   L+     +   ++   + +LHS  
Sbjct: 72  TLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS-- 126

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              I H DLKP NI+L      N   KL DFGI+  +           +       GT  
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIF------GTPE 176

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           ++ PE +    L  ++D++S G+I   LL+G  
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 209

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  108 bits (272), Expect = 3e-26
 Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 32/210 (15%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
           +GEG YG +   L  +      VA+K++         E  ++EI I   + H N+V    
Sbjct: 15  LGEGAYGEVQ--LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY- 71

Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                        L  EY   G L DR+        +      R   +L + +++LH   
Sbjct: 72  ---GHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG-- 123

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ P
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAP 176

Query: 705 EFLASGEL--TPKSDVYSFGIILLRLLTGR 732
           E L           DV+S GI+L  +L G 
Sbjct: 177 ELL-KRREFHAEPVDVWSCGIVLTAMLAGE 205

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  109 bits (274), Expect = 3e-26
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 30/214 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHP-HSLQGPSEFQQEIDI-LSKIRHPNLVTL 588
           +IG G YGS+ K    H      +A+K +      +   +   ++D+ +     P +V  
Sbjct: 29  EIGRGAYGSVNKM--VHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86

Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
            GA     + W +  E + + S +       +         I  +I       L  L   
Sbjct: 87  YGALFREGDCW-ICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE- 143

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I+H D+KP+NILLD +   KL DFGIS  L  + I+             G   YM 
Sbjct: 144 -NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDA--------GCRPYMA 193

Query: 704 PEFLASGELTP----KSDVYSFGIILLRLLTGRP 733
           PE +           +SDV+S GI L  L TGR 
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  109 bits (273), Expect = 5e-26
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 9/175 (5%)

Query: 563 SLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP 620
           S         +I  +      N V  +        L    +     +L+D ++ + +   
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160

Query: 621 LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 680
                 + I  ++   + FLHS     ++H DLKP+NI    + V K+ DFG+   + Q+
Sbjct: 161 REHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217

Query: 681 E----ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           E    + +        T   GT  YM PE +     + K D++S G+IL  LL  
Sbjct: 218 EEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272

>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus} Length = 85

 Score =  101 bits (253), Expect = 6e-26
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 813 EERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV 872
            +  + P  F  P+   +M DP     G   +   +   L +   T P     L    L 
Sbjct: 6   IDYSDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSP-TDPFNRQMLTESMLE 64

Query: 873 PNLALRSAIQEWLQQH 888
           P   L+  IQ W+++ 
Sbjct: 65  PVPELKEQIQAWMREK 80

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  107 bits (269), Expect = 8e-26
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHP-HSLQGPSEFQQEIDI-LSKIRHPNLVTL 588
           ++G G YG + K   RH+     +A+K +    + Q       ++DI +  +  P  VT 
Sbjct: 14  ELGRGAYGVVEKM--RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71

Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
            GA     +VW +  E + + SL+       D    +      +IA  +   L  LHS  
Sbjct: 72  YGALFREGDVW-ICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-- 127

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
             S++H D+KP+N+L++A    K+ DFGIS +L           +    D  G   YM P
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV--------DDVAKDID-AGCKPYMAP 178

Query: 705 EFLASGELTP----KSDVYSFGIILLRLLTGRP 733
           E +           KSD++S GI ++ L   R 
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRF 211

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  107 bits (269), Expect = 9e-26
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 24/208 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
           ++G+G +  + + + +   ++ A K+++   L        ++E  I  K++HPN+V L  
Sbjct: 13  ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +        LV++ +  G L + +  ++     S         ++   + + HS   + I
Sbjct: 73  SIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS---NGI 126

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH +LKP N+LL         KL+DFG++  ++ +E               GT  Y+ PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFA------GTPGYLSPE 177

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L     +   D+++ G+IL  LL G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYP 205

>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B Length = 100

 Score =  100 bits (252), Expect = 1e-25
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 1/82 (1%)

Query: 807 SYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPL 866
                  +  + P  F  P+   +M DP     G   +   +   L +   T P     L
Sbjct: 15  KNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSP-TDPFNRQTL 73

Query: 867 AHKNLVPNLALRSAIQEWLQQH 888
               L P   L+  IQ W+++ 
Sbjct: 74  TESMLEPVPELKEQIQAWMREK 95

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  107 bits (269), Expect = 2e-25
 Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
           ++G G +  + K   +   +Q A K +     +         + ++E+ IL +I+HPN++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           TL           L+ E +  G L D L+ K++   L+ +       ++ + + +LHS  
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              I H DLKP NI+L          K+ DFG++  +           +       GT  
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIF------GTPE 182

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           ++ PE +    L  ++D++S G+I   LL+G  
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  107 bits (270), Expect = 2e-25
 Identities = 61/283 (21%), Positives = 101/283 (35%), Gaps = 64/283 (22%)

Query: 503 KEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLH 560
               SS     +F   S  E+      +     IG+G YG +   +        AIK+++
Sbjct: 4   HHHHSSGRENLYFQGGSLLEL---QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60

Query: 561 PHSLQGPSE-----FQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLS 613
            + ++  +       + E+ ++ K+ HPN+  L       +   LV E    G L D+L+
Sbjct: 61  KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120

Query: 614 CKDNSPPLSWQTRI-------------------------------------RIATELCSV 636
              +         +                                      I  ++ S 
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180

Query: 637 LIFLHSCKPHSIVHGDLKPANILL--DANFVSKLSDFGISRFLSQNEISSNN--TTLCCR 692
           L +LH+     I H D+KP N L   + +F  KL DFG+S+   +         TT    
Sbjct: 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-- 235

Query: 693 TDPKGTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLTGRP 733
               GT  ++ PE L +      PK D +S G++L  LL G  
Sbjct: 236 ----GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV 274

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  106 bits (268), Expect = 2e-25
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 25/207 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
            +G G +G +++ +          K +           ++EI IL+  RH N++ L  + 
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              E   +++E++    + +R++       L+ +  +    ++C  L FLHS   H+I H
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLHS---HNIGH 125

Query: 651 GDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            D++P NI+      +    K+ +FG +R L   +       L           Y  PE 
Sbjct: 126 FDIRPENIIYQTRRSSTI--KIIEFGQARQLKPGDNF---RLLF------TAPEYYAPEV 174

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
                ++  +D++S G ++  LL+G  
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGIN 201

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  107 bits (268), Expect = 2e-25
 Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 27/211 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHP-HSLQGPSEFQQEIDILSK-IRHPNLVTLVG 590
           ++G G  G ++K   R     +A+K +    + +       ++D++ K    P +V   G
Sbjct: 32  EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91

Query: 591 AC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                 +V+ +  E +     E     K    P+  +   ++   +   L +L     H 
Sbjct: 92  TFITNTDVF-IAMELM-GTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYLKE--KHG 145

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+KP+NILLD     KL DFGIS  L  ++ + + +         G  AYM PE +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSA--------GCAAYMAPERI 196

Query: 708 ASGEL-----TPKSDVYSFGIILLRLLTGRP 733
              +        ++DV+S GI L+ L TG+ 
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQF 227

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  107 bits (268), Expect = 2e-25
 Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 32/210 (15%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
           +GEG YG +   L  +      VA+K++         E  ++EI I   + H N+V    
Sbjct: 15  LGEGAYGEVQ--LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY- 71

Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
                        L  EY   G L DR+        +      R   +L + +++LH   
Sbjct: 72  ---GHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG-- 123

Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
              I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ P
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAP 176

Query: 705 EFLASGEL--TPKSDVYSFGIILLRLLTGR 732
           E L           DV+S GI+L  +L G 
Sbjct: 177 ELL-KRREFHAEPVDVWSCGIVLTAMLAGE 205

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  107 bits (270), Expect = 2e-25
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
           ++G G +  + K   +   ++ A K +     +         E ++E+ IL ++ HPN++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78

Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           TL           L+ E +  G L D L+ K++   LS +       ++   + +LH+  
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-- 133

Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              I H DLKP NI+L          KL DFG++  +           +       GT  
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIF------GTPE 183

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           ++ PE +    L  ++D++S G+I   LL+G  
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  105 bits (265), Expect = 3e-25
 Identities = 49/229 (21%), Positives = 85/229 (37%), Gaps = 45/229 (19%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQ---QEIDILSKI-RHPNLVTL 588
           KIG G +GS++K + R      AIK      L G  + Q   +E+   + + +H ++V  
Sbjct: 18  KIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76

Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
             A  E   +    EY   GSL D +S                +  ++   L ++HS   
Sbjct: 77  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 135

Query: 646 HSIVHGDLKPANILLDAN-------------------FVSKLSDFGISRFLSQNEISSNN 686
             +VH D+KP+NI +                       + K+ D G         ISS  
Sbjct: 136 --LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT-----RISSPQ 188

Query: 687 TTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTGRPA 734
                    +G   ++  E L  +    PK+D+++  + ++      P 
Sbjct: 189 VE-------EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  107 bits (270), Expect = 3e-25
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 24/208 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
           ++G+G +  + + + +   ++ A K+++   L        ++E  I  K++HPN+V L  
Sbjct: 36  ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +        LV++ +  G L + +  ++     S         ++   + + HS   + I
Sbjct: 96  SIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS---NGI 149

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH +LKP N+LL         KL+DFG++  ++ +E               GT  Y+ PE
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFA------GTPGYLSPE 200

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L     +   D+++ G+IL  LL G P
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYP 228

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  105 bits (265), Expect = 4e-25
 Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 35/219 (15%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---------FQQEIDILSKI-RH 582
            +G G    + + + +    + A+K++        S            +E+DIL K+  H
Sbjct: 24  ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83

Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           PN++ L         + LV++ +  G L D L+ K     LS +   +I   L  V+  L
Sbjct: 84  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICAL 140

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H     +IVH DLKP NILLD +   KL+DFG S  L   E       +C      GT +
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVC------GTPS 188

Query: 701 YMDPEFLASGEL------TPKSDVYSFGIILLRLLTGRP 733
           Y+ PE +             + D++S G+I+  LL G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  105 bits (263), Expect = 9e-25
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 29/231 (12%)

Query: 525 GATHNFDPSLK---------IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQE 573
           G+T +F    +         +GEG +  +   +      + A+K++        S   +E
Sbjct: 1   GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE 60

Query: 574 IDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
           +++L + + H N++ L+      + + LV+E +  GS+   +  + +    +      + 
Sbjct: 61  VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVV 117

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNT 687
            ++ S L FLH+     I H DLKP NIL    +     K+ DF +   +  N   S  +
Sbjct: 118 QDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174

Query: 688 TLCCRTDPKGTFAYMDPEFLASGELTPKS-----DVYSFGIILLRLLTGRP 733
           T    T P G+  YM PE + +            D++S G+IL  LL+G P
Sbjct: 175 TPELLT-PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  105 bits (264), Expect = 1e-24
 Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 34/309 (11%)

Query: 444 DQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRK 503
              +    +   + +  + L               ++            K+  + +    
Sbjct: 10  GVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGT 69

Query: 504 EASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP 561
           E      M        ++  +     +DP   IG G    + + + R    + A+K++  
Sbjct: 70  ENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV 129

Query: 562 HSLQGPSE--------FQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNGSLED 610
            + +   E         ++E  IL ++  HP+++TL+ +        LV++ +  G L D
Sbjct: 130 TAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD 189

Query: 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670
            L+ K     LS +    I   L   + FLH+   ++IVH DLKP NILLD N   +LSD
Sbjct: 190 YLTEKVA---LSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSD 243

Query: 671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL------TPKSDVYSFGII 724
           FG S  L   E       LC      GT  Y+ PE L             + D+++ G+I
Sbjct: 244 FGFSCHLEPGEKL---RELC------GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294

Query: 725 LLRLLTGRP 733
           L  LL G P
Sbjct: 295 LFTLLAGSP 303

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  104 bits (262), Expect = 1e-24
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRH-PNLVTLV 589
           ++G G +  + + + +    + A K L          +E   EI +L   +  P ++ L 
Sbjct: 36  ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95

Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
                     L+ EY   G +       + +  +S    IR+  ++   + +LH    ++
Sbjct: 96  EVYENTSEIILILEYAAGGEIFSLC-LPELAEMVSENDVIRLIKQILEGVYYLHQ---NN 151

Query: 648 IVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
           IVH DLKP NILL         K+ DFG+SR +           +       GT  Y+ P
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---REIM------GTPEYLAP 202

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L    +T  +D+++ GII   LLT   
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTS 231

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  106 bits (267), Expect = 2e-24
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 23/208 (11%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
           ++G+G +  + + +      + A  +++   L        ++E  I   ++HPN+V L  
Sbjct: 18  ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           +        L+++ +  G L + +  ++     S         ++   ++  H      +
Sbjct: 78  SISEEGHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQ---MGV 131

Query: 649 VHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           VH +LKP N+LL         KL+DFG++  +   +               GT  Y+ PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--QAWFGFA------GTPGYLSPE 183

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            L         D+++ G+IL  LL G P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYP 211

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  104 bits (262), Expect = 2e-24
 Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 30/247 (12%)

Query: 500 KSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIK 557
                      +     D  F ++      ++    IG+G +  + + + R    Q A+K
Sbjct: 2   SPGISGGGGGILDMADDDVLFEDV------YELCEVIGKGPFSVVRRCINRETGQQFAVK 55

Query: 558 M-----LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLED 610
           +               + ++E  I   ++HP++V L+       +  +V+E++    L  
Sbjct: 56  IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115

Query: 611 RLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVS 666
            +  + ++    S         ++   L + H    ++I+H D+KP  +LL   + +   
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPV 172

Query: 667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 726
           KL  FG++  L ++                GT  +M PE +         DV+  G+IL 
Sbjct: 173 KLGGFGVAIQLGES--GLVAGGRV------GTPHFMAPEVVKREPYGKPVDVWGCGVILF 224

Query: 727 RLLTGRP 733
            LL+G  
Sbjct: 225 ILLSGCL 231

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  103 bits (260), Expect = 2e-24
 Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 35/214 (16%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKML------HPHSLQGPSEFQQEIDILSKIRH--P 583
           +G GG+GS+Y G    +     VAIK +          L   +    E+ +L K+     
Sbjct: 51  LGSGGFGSVYSG--IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108

Query: 584 NLVTL--VGACPEVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            ++ L      P+ + L+ E   P   L D ++ +     L  +       ++   +   
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHC 165

Query: 641 HSCKPHSIVHGDLKPANILLDANFVS-KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           H+     ++H D+K  NIL+D N    KL DFG    L         T         GT 
Sbjct: 166 HN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFD------GTR 212

Query: 700 AYMDPEFLASGELT-PKSDVYSFGIILLRLLTGR 732
            Y  PE++         + V+S GI+L  ++ G 
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  103 bits (259), Expect = 5e-24
 Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 26/267 (9%)

Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPS 533
           + ++      + +  +    ++     +     ++S +P ++ D S    +  +  F+  
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGS--NRDALSDFFEVE 58

Query: 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
            ++G G    +Y+   +      A+K+L           + EI +L ++ HPN++ L   
Sbjct: 59  SELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIKLKEI 116

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P   +LV E +  G L DR+  K      S +       ++   + +LH    + IV
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHE---NGIV 170

Query: 650 HGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP N+L      +   K++DFG+S+ +    +     T+C      GT  Y  PE 
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM---KTVC------GTPGYCAPEI 221

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           L      P+ D++S GII   LL G  
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFE 248

>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2 Length = 98

 Score = 96.0 bits (239), Expect = 6e-24
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 813 EERCEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNL 871
           E   +    F  PI   +M DP V      T +   +   L S   T P    PL    +
Sbjct: 14  ETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQ-TDPFNRSPLTMDQI 72

Query: 872 VPNLALRSAIQEWLQQH 888
            PN  L+  IQ WL + 
Sbjct: 73  RPNTELKEKIQRWLAER 89

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  102 bits (256), Expect = 7e-24
 Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +GEG + ++   L R +      AIK+L    +   ++      E D++S++ HP  V L
Sbjct: 38  LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95

Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
                  E       Y  NG L   +  K  S   +  TR   A E+ S L +LH     
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG---K 149

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            I+H DLKP NILL+ +   +++DFG ++ LS     +   +        GT  Y+ PE 
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV------GTAQYVSPEL 203

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           L        SD+++ G I+ +L+ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLP 230

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  104 bits (262), Expect = 1e-23
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 37/212 (17%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +G G +G +  G  +H     +VA+K+L+   ++      +   EI  L   RHP+++ L
Sbjct: 24  LGVGTFGKVKVG--KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 589 VGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                +V +      +V EY+  G L D +        L  +   R+  ++ S + + H 
Sbjct: 82  Y----QVISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHR 134

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              H +VH DLKP N+LLDA+  +K++DFG+S  +S  E      T C      G+  Y 
Sbjct: 135 ---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSC------GSPNYA 182

Query: 703 DPEFLASGEL--TPKSDVYSFGIILLRLLTGR 732
            PE + SG L   P+ D++S G+IL  LL G 
Sbjct: 183 APEVI-SGRLYAGPEVDIWSSGVILYALLCGT 213

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  102 bits (256), Expect = 1e-23
 Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 31/211 (14%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
            +G G  G + +   R    + A+K+L+          +QE+D   +    P++V ++  
Sbjct: 36  VLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----ARQEVDHHWQASGGPHIVCILDV 90

Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
              +        ++ E +  G L  R+  + +    + +    I  ++ + + FLHS   
Sbjct: 91  YENMHHGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFLHS--- 146

Query: 646 HSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
           H+I H D+KP N+L    + + V KL+DFG ++  +QN +     T C       T  Y+
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL----QTPC------YTPYYV 196

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE L   +     D++S G+I+  LL G P
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  102 bits (256), Expect = 1e-23
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 36/213 (16%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKML---HPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++Y          VAIK +      S +   +  +E+  L K+RHPN +   
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120

Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSC 643
           G        W LV EY   GS  D L  + +  PL     + IA         L +LHS 
Sbjct: 121 GCYLREHTAW-LVMEYCL-GSASDLL--EVHKKPL---QEVEIAAVTHGALQGLAYLHS- 172

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             H+++H D+K  NILL    + KL DFG +     + ++  N+ +       GT  +M 
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANSFV-------GTPYWMA 218

Query: 704 PEFLAS---GELTPKSDVYSFGIILLRLLTGRP 733
           PE + +   G+   K DV+S GI  + L   +P
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  102 bits (256), Expect = 1e-23
 Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 30/208 (14%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
           +GEG +G +      H     +VA+K +    L+      +   EI  L  +RHP+++ L
Sbjct: 17  LGEGSFGKVKLA--THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             V   P    +V EY   G L D +  K     ++     R   ++   + + H    H
Sbjct: 75  YDVITTPTDIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHR---H 127

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
            IVH DLKP N+LLD N   K++DFG+S  ++         T C      G+  Y  PE 
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK---TSC------GSPNYAAPEV 178

Query: 707 LASGEL--TPKSDVYSFGIILLRLLTGR 732
           + +G+L   P+ DV+S GI+L  +L GR
Sbjct: 179 I-NGKLYAGPEVDVWSCGIVLYVMLVGR 205

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  101 bits (254), Expect = 2e-23
 Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 35/214 (16%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKM-----LHPHSLQGPSEFQQ---EIDILSKIRHP 583
           +G G +G ++           +V +K      +         +  +   EI ILS++ H 
Sbjct: 32  LGSGAFGFVWTA--VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89

Query: 584 NLVTL--VGACPEVWTLVYEYLPNGS-LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           N++ +  +      + LV E   +G  L   +        L       I  +L S + +L
Sbjct: 90  NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYL 146

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
                  I+H D+K  NI++  +F  KL DFG + +L + ++     T C      GT  
Sbjct: 147 RL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY---TFC------GTIE 194

Query: 701 YMDPEFLASGEL--TPKSDVYSFGIILLRLLTGR 732
           Y  PE L  G     P+ +++S G+ L  L+   
Sbjct: 195 YCAPEVL-MGNPYRGPELEMWSLGVTLYTLVFEE 227

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  100 bits (250), Expect = 4e-23
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 37/216 (17%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKML------HPHSLQGPSEFQQEIDILSKIR---- 581
           +G+GG+G+++ G    +    QVAIK++          L        E+ +L K+     
Sbjct: 39  LGKGGFGTVFAG--HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 582 HPNLVTL--VGACPEVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
           HP ++ L       E + LV E  LP   L D ++ K     L          ++ + + 
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQ 153

Query: 639 FLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
             HS     +VH D+K  NIL+D     +KL DFG    L         T         G
Sbjct: 154 HCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TDFD------G 200

Query: 698 TFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGR 732
           T  Y  PE+++  +     + V+S GI+L  ++ G 
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  100 bits (251), Expect = 4e-23
 Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 25/207 (12%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGA 591
            +GEG +    K + +  +   A+K++           Q+EI  L     HPN+V L   
Sbjct: 18  PLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT---QKEITALKLCEGHPNIVKLHEV 74

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                   LV E L  G L +R+  K +    S      I  +L S +  +H      +V
Sbjct: 75  FHDQLHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHD---VGVV 128

Query: 650 HGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP N+L    + N   K+ DFG +R         +N  L     P  T  Y  PE 
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARL-----KPPDNQPL---KTPCFTLHYAAPEL 180

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRP 733
           L         D++S G+IL  +L+G+ 
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQV 207

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 99.0 bits (247), Expect = 6e-23
 Identities = 34/208 (16%), Positives = 56/208 (26%), Gaps = 54/208 (25%)

Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
             G       ++     L R  QVA+  + P  +       E       LS+I  P +  
Sbjct: 38  FHGGVPPLQFWQALDTALDR--QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 588 L--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           +  V        +V E++  GSL++       + P      IR    L +     H    
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQEVAD----TSPSPVGA-IRAMQSLAAAADAAHR--- 147

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +      P+ + +  +    L                               A M   
Sbjct: 148 AGVALSIDHPSRVRVSIDGDVVL----------------------------AYPATMPDA 179

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
                   P+ D+   G  L  LL  R 
Sbjct: 180 -------NPQDDIRGIGASLYALLVNRW 200

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 97.4 bits (243), Expect = 6e-22
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 29/209 (13%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSK-IRHPNLVTLVGA 591
            IG G Y    + + +  +M+ A+K++            +EI+IL +  +HPN++TL   
Sbjct: 29  DIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP----TEEIEILLRYGQHPNIITLKDV 84

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   +V E +  G L D++  +      S +    +   +   + +LH+     +V
Sbjct: 85  YDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA---QGVV 138

Query: 650 HGDLKPANILL-----DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
           H DLKP+NIL      +   + ++ DFG ++ L          T C       T  ++ P
Sbjct: 139 HRDLKPSNILYVDESGNPESI-RICDFGFAKQLRAEN--GLLMTPC------YTANFVAP 189

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRP 733
           E L         D++S G++L  +LTG  
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYT 218

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 97.1 bits (242), Expect = 2e-21
 Identities = 63/280 (22%), Positives = 103/280 (36%), Gaps = 46/280 (16%)

Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
           ++LL    +E    ++ +DK V  A+ L+ +         +     DF            
Sbjct: 18  LDLLLGVHQELGASELAQDKYV--ADFLQWAEPIVVRLKEVRLQRDDFEI---------- 65

Query: 531 DPSLK-IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIRH 582
              LK IG G +  +   +++  Q     A+K+++   +    E   F++E D+L     
Sbjct: 66  ---LKVIGRGAFSEVA--VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120

Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
             +  L  A        LV EY   G L   LS      P     R  +A E+   +  +
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM-ARFYLA-EIVMAIDSV 178

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H       VH D+KP NILLD     +L+DFG    L  +    +           GT  
Sbjct: 179 HR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL-VAV------GTPD 228

Query: 701 YMDPEFLASGELTPKSDVY-------SFGIILLRLLTGRP 733
           Y+ PE L +    P +  Y       + G+    +  G+ 
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 96.7 bits (241), Expect = 2e-21
 Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 30/211 (14%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
            +G G  G + +   +    + A+KML           ++E+++  +  + P++V +V  
Sbjct: 69  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 123

Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
              ++       +V E L  G L  R+  + +    + +    I   +   + +LHS   
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS--- 179

Query: 646 HSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            +I H D+KP N+L      N + KL+DFG ++  + +      TT C       T  Y+
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL---TTPC------YTPYYV 230

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE L   +     D++S G+I+  LL G P
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYP 261

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 96.7 bits (241), Expect = 3e-21
 Identities = 69/303 (22%), Positives = 116/303 (38%), Gaps = 46/303 (15%)

Query: 447 SLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
             LE  I +           + + +++L     E +   + R+K +   E L  ++   S
Sbjct: 7   RQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNI--LEYLEWAKPFTS 64

Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQ----VAIKMLHP 561
               M     DF               LK IG G +G +   +++        A+K+L+ 
Sbjct: 65  KVKQMRLHREDFEI-------------LKVIGRGAFGEVA--VVKLKNADKVFAMKILNK 109

Query: 562 HSLQGPSE---FQQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKD 616
             +   +E   F++E D+L       + TL  A        LV +Y   G L   LS  +
Sbjct: 110 WEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE 169

Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS-R 675
           +  P     R  +A E+   +  +H       VH D+KP NIL+D N   +L+DFG   +
Sbjct: 170 DRLPEEM-ARFYLA-EMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224

Query: 676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKS-----DVYSFGIILLRLLT 730
            +    + S+           GT  Y+ PE L + E          D +S G+ +  +L 
Sbjct: 225 LMEDGTVQSS--VAV------GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY 276

Query: 731 GRP 733
           G  
Sbjct: 277 GET 279

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 95.0 bits (237), Expect = 3e-21
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
            +GEG YG + K   R+      VAIK                +EI +L ++RH NLV L
Sbjct: 32  LVGEGSYGMVMKC--RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +  C +   W LV+E++ + ++ D L  +     L +Q   +   ++ + + F HS   H
Sbjct: 90  LEVCKKKKRWYLVFEFVDH-TILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHS---H 143

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           +I+H D+KP NIL+  + V KL DFG +R      +++         D   T  Y  PE 
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFAR-----TLAAPGEVY---DDEVATRWYRAPEL 195

Query: 707 L-ASGELTPKSDVYSFGIILLRLLTGRP 733
           L    +     DV++ G ++  +  G P
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEP 223

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 95.5 bits (238), Expect = 3e-21
 Identities = 57/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)

Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
           IG G +G     L+R       VA+K +   +       Q+EI     +RHPN+V    V
Sbjct: 28  IGSGNFGVAR--LMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEV 84

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P    ++ EY   G L +R+         S         +L S + + HS     I 
Sbjct: 85  ILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHS---MQIC 138

Query: 650 HGDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           H DLK  N LLD +     K+ DFG S+    +       +        GT AY+ PE L
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STV------GTPAYIAPEVL 189

Query: 708 ASGEL--TPKSDVYSFGIILLRLLTGR 732
              +      +DV+S G+ L  +L G 
Sbjct: 190 -LRQEYDGKIADVWSCGVTLYVMLVGA 215

>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281

 Score = 93.8 bits (233), Expect = 3e-21
 Identities = 20/77 (25%), Positives = 41/77 (53%)

Query: 812 SEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNL 871
             ++ + P Y    I  E+M++P +   G TY+ + ++  L      +P+T  PL  + L
Sbjct: 199 KRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL 258

Query: 872 VPNLALRSAIQEWLQQH 888
           +PNLA++  I  ++ ++
Sbjct: 259 IPNLAMKEVIDAFISEN 275

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 94.2 bits (235), Expect = 4e-21
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL- 588
           K+G G Y ++YKG   +      VA+K +   S +G PS   +EI ++ +++H N+V L 
Sbjct: 12  KLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69

Query: 589 -VGACPEVWTLVYEYLPN--GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            V       TLV+E++ N      D  +  +    L          +L   L F H    
Sbjct: 70  DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE--- 126

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA----- 700
           + I+H DLKP N+L++     KL DFG++R                   P  TF+     
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG---------------IPVNTFSSEVVT 171

Query: 701 --YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
             Y  P+  + S   +   D++S G IL  ++TG+P
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 92.9 bits (231), Expect = 4e-20
 Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 50/229 (21%)

Query: 534 LKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
            K+G G YG +YK   +  +     A+K +    +       +EI +L +++HPN+++L 
Sbjct: 27  CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQ 84

Query: 590 GACPE-----VWTLVYEYLPN---GSLEDRLSCKDNSP--PLSWQTRIRIATELCSVLIF 639
                     VW L+++Y  +     ++   + K N     L       +  ++   + +
Sbjct: 85  KVFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVS----KLSDFGISRFLSQNEISSNNTTLCCRTDP 695
           LH+   + ++H DLKPANIL+          K++D G +R  +                P
Sbjct: 144 LHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN---------------SP 185

Query: 696 KGTFAYMDPE-----------FLASGELTPKSDVYSFGIILLRLLTGRP 733
               A +DP             L +   T   D+++ G I   LLT  P
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 90.3 bits (225), Expect = 8e-20
 Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 25/208 (12%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
           KIGEG YG ++K   R+      VAIK                +EI +L +++HPNLV L
Sbjct: 10  KIGEGSYGVVFKC--RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67

Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
           +          LV+EY  + ++   L        +       I  +    + F H    H
Sbjct: 68  LEVFRRKRRLHLVFEYCDH-TVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHK---H 121

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           + +H D+KP NIL+  + V KL DFG +R      ++  +       D   T  Y  PE 
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFAR-----LLTGPSDYY---DDEVATRWYRSPEL 173

Query: 707 LASGEL-TPKSDVYSFGIILLRLLTGRP 733
           L       P  DV++ G +   LL+G P
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVP 201

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 88.7 bits (221), Expect = 2e-19
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 34/212 (16%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL--V 589
           KIGEG YG +YK    + +  A+K +       G PS   +EI IL +++H N+V L  V
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   LV+E+L    L+  L        L   T      +L + + + H      ++
Sbjct: 69  IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA-------YM 702
           H DLKP N+L++     K++DFG++R                   P   +        Y 
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFG---------------IPVRKYTHEIVTLWYR 167

Query: 703 DPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            P+  + S + +   D++S G I   ++ G P
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 89.6 bits (223), Expect = 2e-19
 Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 34/218 (15%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNL 585
            +    K+GEG Y ++YKG  +     VA+K +     +G P    +E+ +L  ++H N+
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62

Query: 586 VTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           VTL  +    +  TLV+EYL    L+  L   D    ++         +L   L + H  
Sbjct: 63  VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHR- 118

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA--- 700
               ++H DLKP N+L++     KL+DFG++R  S                P  T+    
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKS---------------IPTKTYDNEV 161

Query: 701 ----YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
               Y  P+  L S + + + D++  G I   + TGRP
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRP 199

>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A Length = 968

 Score = 93.3 bits (231), Expect = 2e-19
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 8/123 (6%)

Query: 767 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 826
            +  ++  R   ++     E   +     E  R +            E  + P  F  P+
Sbjct: 843 VRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKAD------EEEDLEYGDVPDEFLDPL 896

Query: 827 FQEVMQDPHV-AADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWL 885
              +M+DP +  A     +   +K  L S   T P   +PL  +++ PN  LR  I  + 
Sbjct: 897 MYTIMKDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLKLEDVTPNEELRQKILCFK 955

Query: 886 QQH 888
           +Q 
Sbjct: 956 KQK 958

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 90.1 bits (224), Expect = 3e-19
 Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 45/268 (16%)

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLK-IGE 538
           + D   + ++K +     L + +   +    +     D+               +K IG 
Sbjct: 35  DLDFPALRKNKNI--DNFLSRYKDTINKIRDLRMKAEDYEV-------------VKVIGR 79

Query: 539 GGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGA 591
           G +G +   L+RH       A+K+L    +   S+   F +E DI++    P +V L  A
Sbjct: 80  GAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 137

Query: 592 --CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                   +V EY+P G L + +S  D         R   A E+   L  +HS      +
Sbjct: 138 FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA-EVVLALDAIHS---MGFI 190

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H D+KP N+LLD +   KL+DFG    +++  +   + T        GT  Y+ PE L S
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD-TAV------GTPDYISPEVLKS 243

Query: 710 ----GELTPKSDVYSFGIILLRLLTGRP 733
               G    + D +S G+ L  +L G  
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDT 271

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 88.8 bits (221), Expect = 3e-19
 Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL--V 589
           K+GEG YG +YK      + VA+K +   +   G PS   +EI +L ++ HPN+V+L  V
Sbjct: 28  KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87

Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                  TLV+E++    L+  L   +N   L          +L   +   H    H I+
Sbjct: 88  IHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRIL 141

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA-------YM 702
           H DLKP N+L++++   KL+DFG++R                   P  ++        Y 
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFG---------------IPVRSYTHEVVTLWYR 186

Query: 703 DPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            P+  + S + +   D++S G I   ++TG+P
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 89.3 bits (222), Expect = 4e-19
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 51/221 (23%)

Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTL 588
           IG+G +G +   +++        A+K ++       +E +   +E+ I+  + HP LV L
Sbjct: 23  IGKGSFGKVC--IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80

Query: 589 VGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATELCS 635
             +    E   +V + L  G L           E+               ++ I  EL  
Sbjct: 81  WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-------------VKLFIC-ELVM 126

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 695
            L +L +     I+H D+KP NILLD +    ++DF I+  L +       TT+      
Sbjct: 127 ALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMA----- 175

Query: 696 KGTFAYMDPEFLASGELTPKS---DVYSFGIILLRLLTGRP 733
            GT  YM PE  +S +    S   D +S G+    LL GR 
Sbjct: 176 -GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 91.1 bits (226), Expect = 6e-19
 Identities = 78/344 (22%), Positives = 131/344 (38%), Gaps = 47/344 (13%)

Query: 406 EELKRRKEFEEALAN-GKLEL-ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKEL 463
           EE K   EF E +    KLE  E       E+ +   +            +  +     L
Sbjct: 77  EEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHL 136

Query: 464 EQKIISAVELLQNYKKEQ-DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSE 522
            +K +   +L Q Y +E    L+ +  +   E+++  +  +  +   ++    +DFS   
Sbjct: 137 VKKQVPP-DLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSV-- 193

Query: 523 IEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQ---QEIDI 576
                       + IG GG+G +Y           A+K L    ++          E  +
Sbjct: 194 -----------HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242

Query: 577 LSKI---RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-A 630
           LS +     P +V +  A   P+  + + + +  G L   LS          +  +R  A
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS----EADMRFYA 298

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            E+   L  +H+     +V+ DLKPANILLD +   ++SD G++      + S       
Sbjct: 299 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC-----DFSKKKPHAS 350

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKS-DVYSFGIILLRLLTGRP 733
                 GT  YM PE L  G     S D +S G +L +LL G  
Sbjct: 351 V-----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 88.1 bits (219), Expect = 6e-19
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 45/220 (20%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL 588
           K+GEG YG +YK           VAIK +     + G P    +E+ +L +++H N++ L
Sbjct: 41  KLGEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             V        L++EY  N    D     D +P +S +       +L + + F HS    
Sbjct: 99  KSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---R 151

Query: 647 SIVHGDLKPANILLDANFVS-----KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA- 700
             +H DLKP N+LL  +  S     K+ DFG++R                   P   F  
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG---------------IPIRQFTH 196

Query: 701 ------YMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRP 733
                 Y  PE L  S   +   D++S   I   +L   P
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 86.8 bits (216), Expect = 9e-19
 Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 39/217 (17%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL 588
           KIGEG YG+++K   ++ +    VA+K +       G PS   +EI +L +++H N+V L
Sbjct: 9   KIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66

Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             V    +  TLV+E+     L+        +  L  +       +L   L F HS    
Sbjct: 67  HDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHS---R 120

Query: 647 SIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA------ 700
           +++H DLKP N+L++ N   KL++FG++R                   P   ++      
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFG---------------IPVRCYSAEVVTL 165

Query: 701 -YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRPAL 735
            Y  P+    +   +   D++S G I   L      L
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 89.0 bits (221), Expect = 1e-18
 Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 45/289 (15%)

Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSD 517
           +T +E  ++  +A++ + +  K+Q   +M+            +  + + +        ++
Sbjct: 91  ETPEE-REEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE 149

Query: 518 FSFSEIEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQ 572
           F +             LK +G+G +G +   L++        A+K+L    +    E   
Sbjct: 150 FEY-------------LKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAH 194

Query: 573 ---EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI 627
              E  +L   RHP L  L  +    +    V EY   G L   LS +        + R 
Sbjct: 195 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----EDRA 250

Query: 628 RI-ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 686
           R    E+ S L +LHS    ++V+ DLK  N++LD +   K++DFG    L +  I    
Sbjct: 251 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFG----LCKEGIKDGA 304

Query: 687 T--TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T  T C      GT  Y+ PE L   +     D +  G+++  ++ GR 
Sbjct: 305 TMKTFC------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 86.1 bits (214), Expect = 3e-18
 Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 48/221 (21%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ--------EIDILSKIRH 582
            +GEG + ++YK   R       VAIK +    L   SE +         EI +L ++ H
Sbjct: 17  FLGEGQFATVYKA--RDKNTNQIVAIKKIK---LGHRSEAKDGINRTALREIKLLQELSH 71

Query: 583 PNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           PN++ L+ A       +LV++++    LE  +  KDNS  L+              L +L
Sbjct: 72  PNIIGLLDAFGHKSNISLVFDFMET-DLEVII--KDNSLVLTPSHIKAYMLMTLQGLEYL 128

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H    H I+H DLKP N+LLD N V KL+DFG+++                   P   + 
Sbjct: 129 HQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFG---------------SPNRAYT 170

Query: 701 -------YMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
                  Y  PE    +       D+++ G IL  LL   P
Sbjct: 171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 84.9 bits (211), Expect = 6e-18
 Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 55/230 (23%)

Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV-------AIKMLHPHSLQGPSEFQ--QEIDILS 578
            F+  LK +G+G +G ++  L++ +         A+K+L   +L+     +   E DIL 
Sbjct: 25  QFEL-LKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81

Query: 579 KIRHPNLVTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQT 625
           ++ HP +V L  A        L+ ++L  G L           E+               
Sbjct: 82  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------------V 128

Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 685
           +  +A EL   L  LHS     I++ DLKP NILLD     KL+DFG    LS+  I   
Sbjct: 129 KFYLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG----LSKESIDHE 180

Query: 686 NT--TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
               + C      GT  YM PE +     T  +D +SFG+++  +LTG  
Sbjct: 181 KKAYSFC------GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 85.8 bits (213), Expect = 6e-18
 Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 43/218 (19%)

Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----- 588
            IG G +G +++  L    +VAIK +    LQ      +E+ I+  ++HPN+V L     
Sbjct: 47  VIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102

Query: 589 --VGACPEVW-TLVYEYLP---NGSLEDRLSCKDNSPPL-----SWQTRIRIATELCSVL 637
                  EV+  LV EY+P     +       K   P L      +Q        L   L
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ--------LLRSL 154

Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
            ++HS     I H D+KP N+LLD    V KL DFG ++ L   E    N +  C     
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSYIC----- 203

Query: 697 GTFAYMDPEF-LASGELTPKSDVYSFGIILLRLLTGRP 733
            +  Y  PE    +   T   D++S G ++  L+ G+P
Sbjct: 204 -SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP 240

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 88.0 bits (217), Expect = 7e-18
 Identities = 112/721 (15%), Positives = 214/721 (29%), Gaps = 246/721 (34%)

Query: 7   VPAIAQGVDSVRCPDIQ--MAGITSSR--RGIVEEPVASVIEDKIYVAVAKQVKESKSVL 62
             A     D   C D+Q     I S      I+    A                     L
Sbjct: 26  EDAFVDNFD---CKDVQDMPKSILSKEEIDHIIMSKDA---VSGTLR------------L 67

Query: 63  LWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQ------AYREIERQDMHN 116
            W L +   + +    V    ++      KF  S ++ E+ Q       Y E +R  ++N
Sbjct: 68  FWTLLSKQ-EEMVQKFVEEVLRI----NYKFLMSPIKTEQRQPSMMTRMYIE-QRDRLYN 121

Query: 117 HLDMCLLICRQMGV-RAEKLDTESESTEKGILELISH-----YGIR---K--LVMGAAAD 165
                  +  +  V R +          + +LEL         G+    K  + +     
Sbjct: 122 DNQ----VFAKYNVSRLQPY----LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 166 KHYKKKM------MDL---KSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEI 216
              + KM      ++L    S + +    Q              L+Y  + +      + 
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-------------KLLYQIDPNWT-SRSDH 219

Query: 217 SSPSFQASHNTENR---------HPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFD 267
           SS      H+ +           + NCL    +VL +         VQ+      + N  
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCL----LVLLN---------VQNAKA-WNAFNLS 265

Query: 268 RNVGNVMTSQD-SIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPL 326
             +  ++T++   +    S A+ +   +S D  +   +  +   S       +D      
Sbjct: 266 CKI--LLTTRFKQVTDFLSAATTT--HISLDHHSMTLTPDE-VKSLLLK--YLDCR---- 314

Query: 327 IRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKA 386
                   LP   E L ++P                  ++            E++R G A
Sbjct: 315 -----PQDLPR--EVLTTNP---------------RRLSI----------IAESIRDGLA 342

Query: 387 --------EKDAIESIRRAKAS-ESLYAEELKRRKEFEEALA----NGKLE---LERM-- 428
                     D + +I   ++S   L   E ++   F+  L+    +  +    L  +  
Sbjct: 343 TWDNWKHVNCDKLTTII--ESSLNVLEPAEYRKM--FDR-LSVFPPSAHIPTILLSLIWF 397

Query: 429 KKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMER 488
                +VM  +   L + SL+E Q  ES           IS   +    K + +      
Sbjct: 398 DVIKSDVMVVVN-KLHKYSLVEKQPKES----------TISIPSIYLELKVKLENEYALH 446

Query: 489 DKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL 548
              V      +    +     ++ Q+F    +S I                G+       
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYF----YSHI----------------GH------- 479

Query: 549 LRHMQVAIKMLHPHSLQGPSEFQQE-ID---ILSKIRHPNLVTLVGACPEVWTLV----- 599
             H++    + HP  +   + F+   +D   +  KIRH +  T   A   +   +     
Sbjct: 480 --HLK---NIEHPERM---TLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNTLQQLKF 529

Query: 600 YE-YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
           Y+ Y+            DN P      R+     + ++L FL   + + I     K  ++
Sbjct: 530 YKPYI-----------CDNDPKYE---RL-----VNAILDFLPKIEENLICS---KYTDL 567

Query: 659 L 659
           L
Sbjct: 568 L 568

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 3e-08
 Identities = 75/568 (13%), Positives = 152/568 (26%), Gaps = 165/568 (29%)

Query: 366 MAEAENSRR---EAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
             E +   +     FE+A       KD  +  +   + E +  + +   K+         
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGT---L 65

Query: 423 LELERMKKQHDEVMEELQIALDQK--SLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
                +  + +E++++    + +     L S I    +    + +  I   + L N  + 
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 481 QDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGG 540
             +  + R +      +LR++  E   + ++                         G  G
Sbjct: 126 FAKYNVSRLQPYL---KLRQALLELRPAKNV--------------LID--------GVLG 160

Query: 541 YGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI----LSKIRHPNLVTLVGACPEVW 596
            G   K  +     A+ +   + +Q   +F+    I    L     P  V  +     + 
Sbjct: 161 SG---KTWV-----ALDVCLSYKVQCKMDFK----IFWLNLKNCNSPETVLEM-----LQ 203

Query: 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKP 655
            L+Y+  PN +     S        S Q  +R         +       +  +V  +++ 
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR--------LLKSKPYENCLLVLLNVQN 255

Query: 656 ANILLDANFVSKLSDFG-----ISRFLS-QNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           A    +A F     +        +RF    + +S+  TT         T      E    
Sbjct: 256 AKA-WNA-F-----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT--PDEVK-- 304

Query: 710 GELTPKSDVYSFGIILLRL----LTGRP-ALG-ITKEVQYALDTGKLKNLLDPLAGDWPF 763
             L  K            L    LT  P  L  I + ++  L T    N        W  
Sbjct: 305 -SLLLK----YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT--WDN--------WKH 349

Query: 764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFT 823
           V  ++L  +                     VLEP              +E R     +  
Sbjct: 350 VNCDKLTTIIESSLN---------------VLEP--------------AEYR---KMFDR 377

Query: 824 CPIFQEVMQDPHVAA--------DGFTYEAE----------ALKGWLDSG----H----- 856
             +F       H+          D    +             ++                
Sbjct: 378 LSVFPP---SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 857 ETSPMTNLPLAHKNLVPNLALRSAIQEW 884
               + N    H+++V +  +       
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSD 462

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 86.8 bits (215), Expect = 9e-18
 Identities = 72/337 (21%), Positives = 119/337 (35%), Gaps = 31/337 (9%)

Query: 411 RKEFEEALANGKLELERMKKQHDEVME-ELQIALDQKSLLESQIAESDQTAKELEQKIIS 469
           R  F E  A  + EL R     D V E E+     +K+   +                + 
Sbjct: 64  RLLFREFCAT-RPELSRCVAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVP 122

Query: 470 --AVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGAT 527
              V       ++     + ++      E L  +       S     F  + + E +  T
Sbjct: 123 RQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVT 182

Query: 528 -HNFDPSLKIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
            + F     +G+GG+G +    +R      A K L    ++          E  IL K+ 
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242

Query: 582 HPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLI 638
              +V+L  A    +   LV   +  G L+  +           + R    A E+C  L 
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP-EARAVFYAAEICCGLE 300

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPK 696
            LH      IV+ DLKP NILLD +   ++SD G++       +    T           
Sbjct: 301 DLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAV-----HVPEGQTIKGRV------ 346

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  YM PE + +   T   D ++ G +L  ++ G+ 
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 86.4 bits (214), Expect = 1e-17
 Identities = 64/340 (18%), Positives = 120/340 (35%), Gaps = 42/340 (12%)

Query: 405 AEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELE 464
            E+     +  + + +           +D   + L+    Q         ++      L+
Sbjct: 79  HEQHGPALQLWKDIED-----------YDTADDALRPQKAQALRAAYLEPQAQLFCSFLD 127

Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIE 524
            + ++            D L     +AV     L ++  +    S     F  + + E +
Sbjct: 128 AETVARAR-----AGAGDGLFQPLLRAVLA--HLGQAPFQEFLDSLYFLRFLQWKWLEAQ 180

Query: 525 GAT-HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDI 576
                 F     +G GG+G ++    +        A K L+   L+    +Q    E  I
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVF--ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238

Query: 577 LSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATEL 633
           L+K+    +V+L  A        LV   +  G +   +   D   P   + R      ++
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
            S L  LH     +I++ DLKP N+LLD +   ++SD G++  L   +  +         
Sbjct: 299 VSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYA--- 350

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
              GT  +M PE L   E     D ++ G+ L  ++  R 
Sbjct: 351 ---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 84.2 bits (209), Expect = 1e-17
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 48/249 (19%)

Query: 511 MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ- 565
           M + +        +  +  ++   KIG+G +G ++K   RH +    VA+K +   + + 
Sbjct: 1   MAKQYDSVECPFCDEVS-KYEKLAKIGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKE 57

Query: 566 G-PSEFQQEIDILSKIRHPNLVTLVGACPEVWT----------LVYEYLPN---GSLEDR 611
           G P    +EI IL  ++H N+V L+  C    +          LV+++  +   G L + 
Sbjct: 58  GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 117

Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
                     +     R+   L + L ++H    + I+H D+K AN+L+  + V KL+DF
Sbjct: 118 ------LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168

Query: 672 GISRFLSQNEISSNNT------TLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGII 724
           G++R  S  + S  N       TL           Y  PE  L   +  P  D++  G I
Sbjct: 169 GLARAFSLAKNSQPNRYTNRVVTLW----------YRPPELLLGERDYGPPIDLWGAGCI 218

Query: 725 LLRLLTGRP 733
           +  + T  P
Sbjct: 219 MAEMWTRSP 227

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 83.4 bits (207), Expect = 2e-17
 Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)

Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG-----PSEFQQEIDIL---SKIRH 582
           +IG G YG++YK   R       VA+K +   +  G     P    +E+ +L       H
Sbjct: 16  EIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH 73

Query: 583 PNLVTLV-------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATE 632
           PN+V L+              TLV+E++       L+         P L  +T   +  +
Sbjct: 74  PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-----PPPGLPAETIKDLMRQ 128

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCC 691
               L FLH+   + IVH DLKP NIL+ +    KL+DFG++R +  Q  ++    TL  
Sbjct: 129 FLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLW- 184

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                    Y  PE L         D++S G I   +   +P
Sbjct: 185 ---------YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 83.9 bits (208), Expect = 2e-17
 Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 50/268 (18%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
           KK  ++  ++   A  + + L+K    + +++ +      F   +             +G
Sbjct: 7   KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----DQFDRIKT------------LG 50

Query: 538 EGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLVG 590
            G +G +   L++H +     A+K+L    +    + +    E  IL  +  P LV L  
Sbjct: 51  TGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108

Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           +        +V EY+  G +   L                R   A ++     +LHS   
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-----HARFYAA-QIVLTFEYLHS--- 159

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
             +++ DLKP N+L+D     +++DFG ++      +     TLC      GT   + PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLC------GTPEALAPE 208

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRP 733
            + S       D ++ G+++  +  G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYP 236

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 84.8 bits (210), Expect = 2e-17
 Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 54/265 (20%)

Query: 489 DKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL 548
              V   ++  K     ++    P    + S+++ +           IG G +G +Y+  
Sbjct: 25  SMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK----------VIGNGSFGVVYQAK 74

Query: 549 LRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT--------L 598
           L      VAIK +    LQ      +E+ I+ K+ H N+V L                 L
Sbjct: 75  LCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130

Query: 599 VYEYLP---NGSLEDRLSCKDNSPPL-----SWQTRIRIATELCSVLIFLHSCKPHSIVH 650
           V +Y+P             K   P +      +Q        L   L ++HS     I H
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--------LFRSLAYIHS---FGICH 179

Query: 651 GDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLA 708
            D+KP N+LLD +  V KL DFG ++ L + E    N +  C      +  Y  PE    
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYIC------SRYYRAPELIFG 230

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP 733
           + + T   DV+S G +L  LL G+P
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQP 255

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 83.4 bits (207), Expect = 2e-17
 Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 57/232 (24%)

Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV-------AIKMLH-PHSLQGPSEFQQ---EIDI 576
            F+  L+ +G+GGYG ++   +R +         A+K+L     ++   +      E +I
Sbjct: 18  CFEL-LRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74

Query: 577 LSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSW 623
           L +++HP +V L+ A        L+ EYL  G L           ED             
Sbjct: 75  LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT------------ 122

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
                +A E+   L  LH      I++ DLKP NI+L+     KL+DFG    L +  I 
Sbjct: 123 -ACFYLA-EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFG----LCKESIH 173

Query: 684 SNNT--TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 T C      GT  YM PE L         D +S G ++  +LTG P
Sbjct: 174 DGTVTHTFC------GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 83.0 bits (204), Expect = 3e-17
 Identities = 50/265 (18%), Positives = 79/265 (29%), Gaps = 59/265 (22%)

Query: 508 SSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--- 564
           S   P  FS          T       KIGEG +G +++ +  H  VAIK++        
Sbjct: 6   SQKGPVPFSHCL------PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLV 59

Query: 565 -----QGPSEFQQEIDILSKI---------RHPNLVTLV------GACPEVWTLVYEYLP 604
                +   E   EI I  ++         R    + L       G+ P +    +++  
Sbjct: 60  NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYN 119

Query: 605 --NGSLEDRLS--------------------CKDNSPPLSWQTRIRIATELCSVLIFLHS 642
              GS  DR                       +  +   S  T   I  +L + L     
Sbjct: 120 STKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE- 178

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISR---FLSQNEISSNNTTLCCRTDPKGTF 699
                  H DL   N+LL    + KL      +     S     S       R +  G  
Sbjct: 179 -ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIV 237

Query: 700 AYMDPEF---LASGELTPKSDVYSF 721
            + D      L +G+   + D+Y  
Sbjct: 238 VFCDVSMDEDLFTGDGDYQFDIYRL 262

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 82.7 bits (205), Expect = 4e-17
 Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 33/247 (13%)

Query: 500 KSRKEASSSSHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAI 556
           ++R     ++H P+ + D+    +E G   ++    K+G G Y  +++ +    + +V +
Sbjct: 7   RARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 66

Query: 557 KMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTL--VGACPEVWTLVY--EYLPNGSLEDR 611
           K+L P   +   + ++EI IL  +R  PN++TL  +   P   T     E++ N      
Sbjct: 67  KILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF--- 120

Query: 612 LSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLS 669
              K     L+    IR    E+   L + HS     I+H D+KP N+++D  +   +L 
Sbjct: 121 ---KQLYQTLT-DYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLI 173

Query: 670 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRL 728
           D+G++ F    +                +  +  PE L   ++     D++S G +L  +
Sbjct: 174 DWGLAEFYHPGQ---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 224

Query: 729 LTGRPAL 735
           +  +   
Sbjct: 225 IFRKEPF 231

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 82.2 bits (204), Expect = 4e-17
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 42/214 (19%)

Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTL 588
           +G G +G ++  L+R        A+K+L    +    + +    E  +LS + HP ++ +
Sbjct: 14  LGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71

Query: 589 VGAC--PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELCSVLIF 639
            G     +   ++ +Y+  G L        R                +  A E+C  L +
Sbjct: 72  WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP----------NPVAKFYAAEVCLALEY 121

Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTF 699
           LHS     I++ DLKP NILLD N   K++DFG ++      +     TLC      GT 
Sbjct: 122 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLC------GTP 167

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            Y+ PE +++       D +SFGI++  +L G  
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 82.3 bits (204), Expect = 5e-17
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 41/220 (18%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDIL---SKIRHPN 584
           +IGEG YG ++K   R ++     VA+K +   + +   P    +E+ +L       HPN
Sbjct: 18  EIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75

Query: 585 LVTLVGACPEVW-------TLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELC 634
           +V L   C           TLV+E++       L+         P +  +T   +  +L 
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-----PEPGVPTETIKDMMFQLL 130

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRT 693
             L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R +  Q  ++S   TL    
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW--- 184

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                  Y  PE L         D++S G I   +   +P
Sbjct: 185 -------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 80.3 bits (199), Expect = 3e-16
 Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 53/221 (23%)

Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKIRHP 583
           +G+G +G +       + V         A+K+L    +    E      E  +L   RHP
Sbjct: 13  LGKGTFGKV-------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 584 NLVTLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELC 634
            L  L  A    +    V EY   G L      E   +          + R R    E+ 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT----------EERARFYGAEIV 115

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCR 692
           S L +LHS     +V+ D+K  N++LD +   K++DFG    L +  IS   T  T C  
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFC-- 166

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
               GT  Y+ PE L   +     D +  G+++  ++ GR 
Sbjct: 167 ----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 77.3 bits (191), Expect = 2e-15
 Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 51/211 (24%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
            +G G  G + +   +    + A+KML           ++E+++  +  + P++V +V  
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 79

Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
              ++       +V E L  G L  R+  + +    + +    I   +   + +LHS   
Sbjct: 80  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS--- 135

Query: 646 HSIVHGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
            +I H D+KP N+L      N + KL+DFG +                            
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------------------- 167

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             E           D++S G+I+  LL G P
Sbjct: 168 -KETTGEK-YDKSCDMWSLGVIMYILLCGYP 196

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 78.2 bits (193), Expect = 2e-15
 Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 40/246 (16%)

Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH 562
            S S     F+S             +     IG G  G +           VAIK L   
Sbjct: 2   GSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-SR 60

Query: 563 SLQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLP---NGS 607
             Q  +  ++   E+ ++  + H N++ L         +    +V+ +V E +       
Sbjct: 61  PFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY-IVMELMDANLCQV 119

Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
           ++  L   +    L +Q        LC  +  LHS     I+H DLKP+NI++ ++   K
Sbjct: 120 IQMELD-HERMSYLLYQM-------LCG-IKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           + DFG++R    + +          T    T  Y  PE +         D++S G I+  
Sbjct: 168 ILDFGLARTAGTSFMM---------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218

Query: 728 LLTGRP 733
           ++ G  
Sbjct: 219 MIKGGV 224

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 77.3 bits (191), Expect = 3e-15
 Identities = 49/242 (20%), Positives = 81/242 (33%), Gaps = 39/242 (16%)

Query: 516 SDFSFSEIEGATHN----FDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSE- 569
            + +  ++    H     +     I  G YG++  G+    + VAIK +      G +  
Sbjct: 6   GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVN 65

Query: 570 -FQQ---------EIDILSKIRHPNLVTLVGA-CPEVWT------LVYEYLPNGSLEDRL 612
                        EI +L+   HPN++ L                LV E +    L   +
Sbjct: 66  ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI 124

Query: 613 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 672
              D    +S Q        +   L  LH      +VH DL P NILL  N    + DF 
Sbjct: 125 --HDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFN 179

Query: 673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTG 731
           ++R  + +            T       Y  PE  +     T   D++S G ++  +   
Sbjct: 180 LAREDTADANK---------THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230

Query: 732 RP 733
           + 
Sbjct: 231 KA 232

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 76.9 bits (190), Expect = 4e-15
 Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 74/286 (25%)

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPSLK-IG 537
                  +     ++   ++   + A+ + H  +    +F               LK +G
Sbjct: 17  GAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFEL-------------LKVLG 63

Query: 538 EGGYGSIYKGLLRHMQV-------AIKMLHPHSLQGPSEFQQ----EIDILSKIRH-PNL 585
            G YG ++  L+R +         A+K+L   ++   ++  +    E  +L  IR  P L
Sbjct: 64  TGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121

Query: 586 VTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATE 632
           VTL  A        L+ +Y+  G L           E                +I +  E
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-------------VQIYVG-E 167

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT---TL 689
           +   L  LH      I++ D+K  NILLD+N    L+DFG    LS+  ++         
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFG----LSKEFVADETERAYDF 220

Query: 690 CCRTDPKGTFAYMDPEFLASGEL--TPKSDVYSFGIILLRLLTGRP 733
           C      GT  YM P+ +  G+       D +S G+++  LLTG  
Sbjct: 221 C------GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 77.0 bits (190), Expect = 6e-15
 Identities = 59/281 (20%), Positives = 103/281 (36%), Gaps = 61/281 (21%)

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPS 533
            +Y     E    +       EE +++     S          DF               
Sbjct: 10  HDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDL------------- 56

Query: 534 LK-IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEF---QQEIDILSKI-RHPN 584
           L+ IG G Y  +   L+R  +     A++++    +    +    Q E  +  +   HP 
Sbjct: 57  LRVIGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 114

Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELC 634
           LV L  +C         V EY+  G L      + +L           +   R  + E+ 
Sbjct: 115 LVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----------EEHARFYSAEIS 163

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCR 692
             L +LH      I++ DLK  N+LLD+    KL+D+G    + +  +   +T  T C  
Sbjct: 164 LALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFC-- 214

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
               GT  Y+ PE L   +     D ++ G+++  ++ GR 
Sbjct: 215 ----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 76.2 bits (188), Expect = 7e-15
 Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 46/255 (18%)

Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAI 556
                 A++++  P+      F ++      +     IGEG YG +      L  ++VAI
Sbjct: 2   HHHHHMAAAAAAGPEMVRGQVF-DV---GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAI 57

Query: 557 KMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLVTLVGACP--------EVWTLV 599
           K + P        F+          EI IL + RH N++ +             +V+ +V
Sbjct: 58  KKISP--------FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY-IV 108

Query: 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659
            + +     E  L     +  LS         ++   L ++HS    +++H DLKP+N+L
Sbjct: 109 QDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLL 160

Query: 660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDV 718
           L+     K+ DFG++R    +   +        T+   T  Y  PE  L S   T   D+
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFL-----TEYVATRWYRAPEIMLNSKGYTKSIDI 215

Query: 719 YSFGIILLRLLTGRP 733
           +S G IL  +L+ RP
Sbjct: 216 WSVGCILAEMLSNRP 230

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 76.2 bits (188), Expect = 8e-15
 Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 40/220 (18%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS----EFQQEIDILSKIRHPNLVTL 588
             G+G +G++  G  +   M VAIK +    +Q P     E Q  +  L+ + HPN+V L
Sbjct: 30  MAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQ-IMQDLAVLHHPNIVQL 84

Query: 589 --------VGACPEVW-TLVYEYLPNGSLED--RL--SCKDNSPPLSWQTRIRIATELCS 635
                        +++  +V EY+P    +   R   +                  +L  
Sbjct: 85  QSYFYTLGERDRRDIYLNVVMEYVP----DTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            +  LH     ++ H D+KP N+L++ A+   KL DFG ++ LS +E    N    C   
Sbjct: 141 SIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYIC--- 193

Query: 695 PKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
              +  Y  PE    +   T   D++S G I   ++ G P
Sbjct: 194 ---SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 76.1 bits (188), Expect = 9e-15
 Identities = 78/280 (27%), Positives = 112/280 (40%), Gaps = 69/280 (24%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLK-I 536
            + Q+   M  + A   A   + +   +S+    P   SDF F             LK I
Sbjct: 3   SQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKP---SDFHF-------------LKVI 46

Query: 537 GEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEF---QQEIDILSK-IRHPNLVTL 588
           G+G +G +   L RH       A+K+L   ++    E      E ++L K ++HP LV L
Sbjct: 47  GKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104

Query: 589 VGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATELCS 635
             +    +    V +Y+  G L           E R              R   A E+ S
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-------------ARFYAA-EIAS 150

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCCRT 693
            L +LHS    +IV+ DLKP NILLD+     L+DFG    L +  I  N+T  T C   
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFG----LCKENIEHNSTTSTFC--- 200

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
              GT  Y+ PE L         D +  G +L  +L G P
Sbjct: 201 ---GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 76.8 bits (189), Expect = 9e-15
 Identities = 60/320 (18%), Positives = 108/320 (33%), Gaps = 78/320 (24%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
            ++ +          ++  + RK    +  ++ MP+  SD+   +       ++    IG
Sbjct: 9   AQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPD------RYEIRHLIG 62

Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLV 586
            G YG + +   +     VAIK +          F+          EI IL+++ H ++V
Sbjct: 63  TGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREIAILNRLNHDHVV 115

Query: 587 TLVGACP--------EVWTLVYEYLP---------NGSLEDRLSCKDNSPPLSWQTRIRI 629
            ++            E++ +V E               L +          L +      
Sbjct: 116 KVLDIVIPKDVEKFDELY-VVLEIADSDFKKLFRTPVYLTELHIKT-----LLYNL---- 165

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
              L   + ++HS     I+H DLKPAN L++ +   K+ DFG++R +   E  ++   +
Sbjct: 166 ---LVG-VKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218

Query: 690 CCRTDPKGTFAYMD-------------------PE-FLASGELTPKSDVYSFGIILLRLL 729
             R D      +                     PE  L     T   DV+S G I   LL
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278

Query: 730 TGRPALGITKEVQYALDTGK 749
                       +  L  G 
Sbjct: 279 NMIKENVAYHADRGPLFPGS 298

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 75.3 bits (186), Expect = 1e-14
 Identities = 57/217 (26%), Positives = 84/217 (38%), Gaps = 44/217 (20%)

Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSK-IRH 582
           +G+G +G +                   AIK L    +    +      E  +LS    H
Sbjct: 25  LGKGSFGKV-------FLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77

Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIF 639
           P L  +       E    V EYL  G L   +            +R    A E+   L F
Sbjct: 78  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD----LSRATFYAAEIILGLQF 133

Query: 640 LHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNT--TLCCRTDPK 696
           LHS     IV+ DLK  NILLD +  + K++DFG    + +  +  +    T C      
Sbjct: 134 LHS---KGIVYRDLKLDNILLDKDGHI-KIADFG----MCKENMLGDAKTNTFC------ 179

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           GT  Y+ PE L   +     D +SFG++L  +L G+ 
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 49/243 (20%), Positives = 84/243 (34%), Gaps = 60/243 (24%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL---- 588
            +G G +G + +        + A+K +       P    +E+DI+  + H N++ L    
Sbjct: 14  TLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYF 69

Query: 589 -----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE----------- 632
                    P      +  L   +       K      S    + +  E           
Sbjct: 70  YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLK 129

Query: 633 --------------------LCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF 671
                               L   + F+HS     I H D+KP N+L+++     KL DF
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDF 186

Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLT 730
           G ++ L  +E    +    C      +  Y  PE  L + E TP  D++S G +   L+ 
Sbjct: 187 GSAKKLIPSE---PSVAYIC------SRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237

Query: 731 GRP 733
           G+P
Sbjct: 238 GKP 240

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 75.0 bits (185), Expect = 2e-14
 Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 56/223 (25%)

Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
           IG G Y  +       + V         A+K++    +    +    Q E  +  +   H
Sbjct: 17  IGRGSYAKV-------LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69

Query: 583 PNLVTLVGAC---PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATE 632
           P LV L  +C         V EY+  G L      + +L           +   R  + E
Sbjct: 70  PFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----------EEHARFYSAE 118

Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLC 690
           +   L +LH      I++ DLK  N+LLD+    KL+D+G    + +  +   +T  T C
Sbjct: 119 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFC 171

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 GT  Y+ PE L   +     D ++ G+++  ++ GR 
Sbjct: 172 ------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 76.0 bits (187), Expect = 2e-14
 Identities = 49/236 (20%), Positives = 86/236 (36%), Gaps = 22/236 (9%)

Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
           S S    QF+S             +     IG G  G +           VAIK L    
Sbjct: 40  SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-SRP 98

Query: 564 LQGPSEFQQ---EIDILSKIRHPNLVTL---VGACPEVWTLVYEYLPNGSLEDRLSCKDN 617
            Q  +  ++   E+ ++  + H N+++L         +      YL    ++  L     
Sbjct: 99  FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158

Query: 618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 677
                 +    +   LC  +  LHS     I+H DLKP+NI++ ++   K+ DFG++R  
Sbjct: 159 MELDHERMSYLLYQMLCG-IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214

Query: 678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             + +          T    T  Y  PE +         D++S G I+  ++  + 
Sbjct: 215 GTSFMM---------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 75.0 bits (185), Expect = 2e-14
 Identities = 59/222 (26%), Positives = 86/222 (38%), Gaps = 54/222 (24%)

Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
           +G+G +G +       M           A+K+L    +    +      E  ILS    H
Sbjct: 31  LGKGSFGKV-------MLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83

Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATEL 633
           P L  L      P+    V E++  G L        R            + R R  A E+
Sbjct: 84  PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----------EARARFYAAEI 133

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCC 691
            S L+FLH      I++ DLK  N+LLD     KL+DFG    + +  I +  T  T C 
Sbjct: 134 ISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFG----MCKEGICNGVTTATFC- 185

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                GT  Y+ PE L      P  D ++ G++L  +L G  
Sbjct: 186 -----GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 75.0 bits (185), Expect = 2e-14
 Identities = 51/222 (22%), Positives = 83/222 (37%), Gaps = 54/222 (24%)

Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
           +G+G +G +       M           A+K+L    +    +      E  +L+   + 
Sbjct: 28  LGKGSFGKV-------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80

Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATEL 633
           P L  L       +    V EY+  G L        R            +      A E+
Sbjct: 81  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK----------EPHAVFYAAEI 130

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TLCC 691
              L FL S     I++ DLK  N++LD+    K++DFG    + +  I    T  T C 
Sbjct: 131 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFG----MCKENIWDGVTTKTFC- 182

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                GT  Y+ PE +A        D ++FG++L  +L G+ 
Sbjct: 183 -----GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 74.6 bits (184), Expect = 2e-14
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 55/234 (23%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EIDILS 578
           F     +GEG YG +     +     VAIK + P        F +         EI IL 
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIKILK 64

Query: 579 KIRHPNLVTLVGACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLS-------- 622
             +H N++T+             EV+ ++ E +    L   +S    +  LS        
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVY-IIQELMQT-DLHRVIS----TQMLSDDHIQYFI 118

Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 682
           +QT       L + +  LH     +++H DLKP+N+L+++N   K+ DFG++R + ++  
Sbjct: 119 YQT-------LRA-VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167

Query: 683 SSNNTTLCCR--TDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            ++  T       +   T  Y  PE  L S + +   DV+S G IL  L   RP
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221

>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 68.1 bits (166), Expect = 3e-14
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 822 FTCPIFQEVMQDPHVAAD-GFTYEAEALKGWLDSGHETS-----PMT---NLPLAHKNLV 872
           FTCPI +E M+ P      G TYE +A+   ++S  +       P     +  +   +L+
Sbjct: 8   FTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLI 67

Query: 873 PNLALRSAIQEWLQQH 888
            + ALR AI+   ++ 
Sbjct: 68  QDEALRRAIENHNKKR 83

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 74.0 bits (182), Expect = 6e-14
 Identities = 53/290 (18%), Positives = 97/290 (33%), Gaps = 73/290 (25%)

Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM--QVAI 556
                 +   +   Q   +    +      N+     IG G YG +Y    ++    VAI
Sbjct: 3   HHHHHSSGRENLYFQGIKNVHVPD------NYIIKHLIGRGSYGYVYLAYDKNTEKNVAI 56

Query: 557 KMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLVTLVGACP--------EVWTLV 599
           K ++         F+          EI IL++++   ++ L             E++ +V
Sbjct: 57  KKVN-------RMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY-IV 108

Query: 600 YEYLP---------NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
            E               L +     ++   + +         L     F+H      I+H
Sbjct: 109 LEIADSDLKKLFKTPIFLTE-----EHIKTILYNL-------LLG-ENFIHES---GIIH 152

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD------- 703
            DLKPAN LL+ +   K+ DFG++R ++  + ++    L    +P      +        
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212

Query: 704 -------PE-FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 745
                  PE  L     T   D++S G I   LL    +       ++ L
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 73.5 bits (180), Expect = 2e-13
 Identities = 57/284 (20%), Positives = 105/284 (36%), Gaps = 56/284 (19%)

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATH 528
              E  +  +++ +  ++ +     E +      K  ++ +      +DF+F        
Sbjct: 294 EGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNF-------- 345

Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEFQQ---EID 575
                L  +G+G +G +       M           A+K+L    +    + +    E  
Sbjct: 346 -----LMVLGKGSFGKV-------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393

Query: 576 ILSKI-RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-AT 631
           +L+   + P L  L       +    V EY+  G L   +           +      A 
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK----EPHAVFYAA 449

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT--TL 689
           E+   L FL S     I++ DLK  N++LD+    K++DFG    + +  I    T  T 
Sbjct: 450 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFG----MCKENIWDGVTTKTF 502

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           C      GT  Y+ PE +A        D ++FG++L  +L G+ 
Sbjct: 503 C------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 29/225 (12%)

Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
              +     +G GG G ++  +      +VAIK +    L  P   +    EI I+ ++ 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLD 66

Query: 582 HPNLVTLVGA-CPEVWTLVYEYLPNGSLED-----RLSCKD-----NSPPLSWQTRIRIA 630
           H N+V +     P    L  +      L            D        PL  +      
Sbjct: 67  HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM 126

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTL 689
            +L   L ++HS    +++H DLKPAN+ ++  + V K+ DFG++R +  +   S+   L
Sbjct: 127 YQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY--SHKGHL 181

Query: 690 CCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
              ++   T  Y  P   L+    T   D+++ G I   +LTG+ 
Sbjct: 182 ---SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 71.6 bits (176), Expect = 2e-13
 Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 43/247 (17%)

Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH 562
           + S      F+              +     +G G YGS+   + +    +VAIK L   
Sbjct: 1   SLSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-SR 59

Query: 563 SLQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLP---NGS 607
             Q     ++   E+ +L  ++H N++ L         +    + + LV  ++       
Sbjct: 60  PFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY-LVMPFMQTDLQKI 118

Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
           +  + S ++    L +Q        L   L ++HS     +VH DLKP N+ ++ +   K
Sbjct: 119 MGLKFS-EEKIQYLVYQM-------LKG-LKYIHSA---GVVHRDLKPGNLAVNEDCELK 166

Query: 668 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILL 726
           + DFG++R          +  +   T    T  Y  PE  L+        D++S G I+ 
Sbjct: 167 ILDFGLAR--------HADAEM---TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 215

Query: 727 RLLTGRP 733
            +LTG+ 
Sbjct: 216 EMLTGKT 222

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 70.9 bits (174), Expect = 6e-13
 Identities = 62/221 (28%), Positives = 88/221 (39%), Gaps = 51/221 (23%)

Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRH------PN 584
           IG+G +G + K      H  VA+KM+           +Q   EI IL  +R        N
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMN 160

Query: 585 LVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
           ++ ++         C     + +E L + +L + L  K+     S     + A  +   L
Sbjct: 161 VIHMLENFTFRNHIC-----MTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCL 213

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVS--KLSDFGISRFLSQN---EISSNNTTLCCR 692
             LH  +   I+H DLKP NILL     S  K+ DFG S +  Q     I S       R
Sbjct: 214 DALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQS-------R 263

Query: 693 TDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                 F Y  PE +         D++S G IL  LLTG P
Sbjct: 264 ------F-YRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 40/241 (16%)

Query: 512 PQFFSDFSFSEIEGA----THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ 565
           P   S F   E+          +     +G G YG++   +      +VAIK L     Q
Sbjct: 5   PPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQ 63

Query: 566 GPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLPNGSLEDRLS 613
                ++   E+ +L  +RH N++ L         +    + + LV  ++        L 
Sbjct: 64  SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY-LVMPFM-----GTDLG 117

Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
                  L       +  ++   L ++H+     I+H DLKP N+ ++ +   K+ DFG+
Sbjct: 118 KLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174

Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGR 732
           +R                 T    T  Y  PE  L     T   D++S G I+  ++TG+
Sbjct: 175 ARQADSE-----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

Query: 733 P 733
            
Sbjct: 224 T 224

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 68.5 bits (168), Expect = 3e-12
 Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 36/243 (14%)

Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
             S   P F+       I      +     +G G YGS+         ++VA+K L    
Sbjct: 7   HHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRP 65

Query: 564 LQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLPNGSLEDR 611
            Q     ++   E+ +L  ++H N++ L         +    +V+ LV   +    L + 
Sbjct: 66  FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-LVTHLMGA-DLNNI 123

Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
           + C+     L+      +  ++   L ++HS     I+H DLKP+N+ ++ +   K+ DF
Sbjct: 124 VKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176

Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLT 730
           G++R  +              T    T  Y  PE  L         D++S G I+  LLT
Sbjct: 177 GLARHTADE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225

Query: 731 GRP 733
           GR 
Sbjct: 226 GRT 228

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 67.8 bits (166), Expect = 5e-12
 Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 63/246 (25%)

Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EID 575
              ++   K+G+G YG ++K + R     VA+K +          FQ          EI 
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREIM 60

Query: 576 ILSKIR-HPNLVTLVGACP-----EVWTLVYEYLPNGSLEDRLSCKDNSPPLS------- 622
           IL+++  H N+V L+         +V+ LV++Y+     E  L     +  L        
Sbjct: 61  ILTELSGHENIVNLLNVLRADNDRDVY-LVFDYM-----ETDLHAVIRANILEPVHKQYV 114

Query: 623 -WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 681
            +Q        +   + +LHS     ++H D+KP+NILL+A    K++DFG+SR      
Sbjct: 115 VYQL-------IKV-IKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163

Query: 682 ISSNNTTLCCRTDPKGTFAYMD-------------PE-FLASGELTPKSDVYSFGIILLR 727
             +NN  L    + +                    PE  L S + T   D++S G IL  
Sbjct: 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223

Query: 728 LLTGRP 733
           +L G+P
Sbjct: 224 ILCGKP 229

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 32/268 (11%)

Query: 500 KSRKEASSSSHMPQFFSDFSF----------SEIEGA-THNFDPSLKIGE-GGYGSIYKG 547
           K  KE ++ S      S+               + GA T    P + I E   +G++   
Sbjct: 58  KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 117

Query: 548 LLRHMQVAIK-MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNG 606
           L       +         +   ++   I +  K R  ++ +   +       V E   + 
Sbjct: 118 LRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS--GFVEEKSLSD 175

Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
             E+          L+ +  I  + ++   + FL S K    +H DL   NILL    V 
Sbjct: 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 232

Query: 667 KLSDFGISRFLSQNE--ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGII 724
           K+ DFG++R + ++   +   +  L  +        +M PE +     T +SDV+SFG++
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLK--------WMAPETIFDRVYTIQSDVWSFGVL 284

Query: 725 LLRLLT-GR---PALGITKEVQYALDTG 748
           L  + + G    P + I +E    L  G
Sbjct: 285 LWEIFSLGASPYPGVKIDEEFCRRLKEG 312

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 43/195 (22%), Positives = 65/195 (33%), Gaps = 32/195 (16%)

Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
            +G G +G + +     +        VA+KML    +         E+ IL  I  H N+
Sbjct: 29  PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88

Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           V L+GAC        ++ E+   G+L   L  K N          R       V      
Sbjct: 89  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYV------ 142

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG---TF 699
                 +  DLK     + ++  S  S F   + LS  E       L            +
Sbjct: 143 ----GAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICY 198

Query: 700 AY-----MDPEFLAS 709
           ++     M  EFLAS
Sbjct: 199 SFQVAKGM--EFLAS 211

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 41/239 (17%), Positives = 91/239 (38%), Gaps = 71/239 (29%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKML------HPHSLQGPSEFQQEIDILSKIR----- 581
           K+G G + +++    ++ +  VA+K++         +       + EI +L ++      
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA-------EDEIKLLQRVNDADNT 78

Query: 582 ------HPNLVTLVGA-----------CPEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSW 623
                   +++ L+                   +V+E L   +L   +   ++   PL  
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVV-----MVFEVL-GENLLALIKKYEHRGIPLI- 131

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS------KLSDFGISRFL 677
             + +I+ +L   L ++H  +   I+H D+KP N+L++           K++D G + + 
Sbjct: 132 YVK-QISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188

Query: 678 SQ---NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            +   N I +                Y  PE L        +D++S   ++  L+TG  
Sbjct: 189 DEHYTNSIQTR--------------EYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 65.9 bits (161), Expect = 2e-11
 Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 45/220 (20%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP------ 583
            IG+G +G + K    +    VAIK++        +   Q   E+ +L  +         
Sbjct: 61  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKY 116

Query: 584 NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCS 635
            +V L          C     LV+E L + +L D L  ++ +   +S     + A ++C+
Sbjct: 117 YIVHLKRHFMFRNHLC-----LVFEML-SYNLYDLL--RNTNFRGVSLNLTRKFAQQMCT 168

Query: 636 VLIFLHSCKPHSIVHGDLKPANILL--DANFVSKLSDFGISRFLSQNEISSNNTTLCCRT 693
            L+FL + +   I+H DLKP NILL        K+ DFG S  L Q         +  R 
Sbjct: 169 ALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSR- 222

Query: 694 DPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
                F Y  PE L         D++S G IL+ + TG P
Sbjct: 223 -----F-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 27/211 (12%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
           KIG G +G IY G  +    +VAIK+    +     +   E  I   ++    +  +   
Sbjct: 16  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWC 73

Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           GA  +   +V E L  G SLED  +        S +T + +A ++ S + ++HS    + 
Sbjct: 74  GAEGDYNVMVMELL--GPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS---KNF 126

Query: 649 VHGDLKPANILL----DANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPK--GTFAY 701
           +H D+KP N L+      N V  + DFG++ ++      +  +  +  R +    GT  Y
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRD----ARTHQHIPYRENKNLTGTARY 181

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                    E + + D+ S G +L+    G 
Sbjct: 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 65.2 bits (159), Expect = 3e-11
 Identities = 43/245 (17%), Positives = 90/245 (36%), Gaps = 47/245 (19%)

Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQ-----QEIDILSKIRH 582
            IG+GG+G IY   +             +K+    +    +E +      + + + K   
Sbjct: 42  PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101

Query: 583 PNLVTLVGACPEVWT------------LVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRI 629
              +  +G      +            ++ +    G  L+     + N+   S +T +++
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIY--EANAKRFSRKTVLQL 157

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDFGISRFLSQNEISSNNT 687
           +  +  +L ++H    H  VHGD+K +N+LL+     +  L D+G++             
Sbjct: 158 SLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAY-----RYCPEGV 209

Query: 688 TLCCRTDPK----GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGI---TK 739
                 DPK    GT  +   +       + + D+   G  +++ LTG  P        K
Sbjct: 210 HKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269

Query: 740 EVQYA 744
            V+ +
Sbjct: 270 YVRDS 274

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 62.4 bits (152), Expect = 2e-10
 Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 45/244 (18%)

Query: 535 KIGEGGYGSIYKG----------LLRHMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHP 583
                  G +Y+             +  + ++K+      L     F Q      ++   
Sbjct: 49  FQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKW 108

Query: 584 NLVTLVGAC--PEVWT----------LVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIA 630
             +        P              LV   L  G SL+           LS ++ +++A
Sbjct: 109 KKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQS-ALDVSPKHVLSERSVLQVA 165

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDFGISRFLSQNEISSNNTT 688
             L   L FLH    +  VHG++   NI +D    S+  L+ +G +          +   
Sbjct: 166 CRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF-----RYCPSGKH 217

Query: 689 LCCRTDPK----GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGI---TKE 740
           +      +    G   ++  +       + +SD+ S G  +L+ L G  P       T++
Sbjct: 218 VAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTED 277

Query: 741 VQYA 744
           +   
Sbjct: 278 IMKQ 281

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 47/228 (20%), Positives = 84/228 (36%), Gaps = 44/228 (19%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG GG+G IY      +  + A  ++     +    F  E+    ++   + +      
Sbjct: 44  KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQRVAKKDCIKKWIER 102

Query: 593 --------PEVW-------------TLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIA 630
                   P  +              +V E L  G  L+        +      T +++ 
Sbjct: 103 KQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKISGQ---NGTFKKSTVLQLG 157

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDFGISRFLSQNEISSNNTT 688
             +  VL ++H    +  VHGD+K AN+LL      +  L+D+G+S          N   
Sbjct: 158 IRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSY-----RYCPNGNH 209

Query: 689 LCCRTDPK----GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
              + +P+    GT  +   +      L+ +SDV   G  +LR L G+
Sbjct: 210 KQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK 257

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 61.8 bits (150), Expect = 9e-10
 Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 14/156 (8%)

Query: 360  DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
            +++   +A  +    E   E   R + E++  + ++  K        +L+ + E EE  A
Sbjct: 912  EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLE-EEEAA 970

Query: 420  NGKLELERMKKQHDEVMEELQIALD-----------QKSLLESQIAESDQTAKELEQKII 468
              KL+LE  K   D  +++++  +            ++ LLE ++++      E E+K  
Sbjct: 971  RQKLQLE--KVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAK 1028

Query: 469  SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
            +  +L   ++    EL++   K  K  +EL K +++
Sbjct: 1029 NLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRK 1064

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 59.5 bits (144), Expect = 5e-09
 Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 4/148 (2%)

Query: 361  QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKAS----ESLYAEELKRRKEFEE 416
                 + + E+      ++  +  K  K   E +     +    E       K + + E 
Sbjct: 980  TADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHES 1039

Query: 417  ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
             ++  ++ L++ +K   E+ +  +    + S L  QIAE      EL+ ++    E LQ 
Sbjct: 1040 MISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQA 1099

Query: 477  YKKEQDELQMERDKAVKEAEELRKSRKE 504
                 ++   +++ A+K+  EL     +
Sbjct: 1100 ALARLEDETSQKNNALKKIRELESHISD 1127

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 54.8 bits (132), Expect = 1e-07
 Identities = 29/154 (18%), Positives = 62/154 (40%), Gaps = 11/154 (7%)

Query: 356  DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
            ++  ++L +     E    E   +       E++  +++ + K        EL+ R + E
Sbjct: 996  EDQNNKLTKERKLLE----ERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKE 1051

Query: 416  EA----LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
            E     L   K +LE       E + ELQ    Q + L++Q+A+ ++  +    ++    
Sbjct: 1052 EKSRQELEKIKRKLEGESSDLHEQIAELQ---AQIAELKAQLAKKEEELQAALARLEDET 1108

Query: 472  ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
                N  K+  EL+       ++ E  + +R +A
Sbjct: 1109 SQKNNALKKIRELESHISDLQEDLESEKAARNKA 1142

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 26/144 (18%), Positives = 56/144 (38%)

Query: 363  AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
             Q   E    + +   E     +AE+  +    + +  E +  E   R +E EE     +
Sbjct: 888  TQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQ 947

Query: 423  LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
             E ++M++Q  ++ E+L+     +  L+ +   +D   K++E  I+   +      KE+ 
Sbjct: 948  AEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERK 1007

Query: 483  ELQMERDKAVKEAEELRKSRKEAS 506
             L+           E  +  K  +
Sbjct: 1008 LLEERVSDLTTNLAEEEEKAKNLT 1031

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 52.9 bits (127), Expect = 4e-07
 Identities = 24/161 (14%), Positives = 63/161 (39%), Gaps = 7/161 (4%)

Query: 356  DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
              L ++++           +A      + K E    E   R K  E    E  K +++ E
Sbjct: 1007 KLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLE 1066

Query: 416  EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQI-------AESDQTAKELEQKII 468
               ++   ++  ++ Q  E+  +L    ++     +++         + +  +ELE  I 
Sbjct: 1067 GESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHIS 1126

Query: 469  SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSS 509
               E L++ K  +++ + ++    +E E L+   ++   ++
Sbjct: 1127 DLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDTLDTT 1167

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 50.6 bits (121), Expect = 2e-06
 Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 18/140 (12%)

Query: 368  EAENSRREAFEEALRRGKAE-KDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE 426
            + E   R+  E+  R+ + E  D  E I   +A  +    +L + KE E   A  +LE E
Sbjct: 1049 KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAK-KEEELQAALARLEDE 1107

Query: 427  R------------MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
                         ++    ++ E+L+     ++  E Q  +  +  + L+ ++    E  
Sbjct: 1108 TSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL----EDT 1163

Query: 475  QNYKKEQDELQMERDKAVKE 494
             +    Q EL+    K   +
Sbjct: 1164 LDTTATQQELRGSDYKDDDD 1183

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 49.4 bits (118), Expect = 5e-06
 Identities = 20/127 (15%), Positives = 51/127 (40%)

Query: 379 EALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEE 438
             L+  + E++        + ++    +     KE E+       E   ++++     E 
Sbjct: 848 PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907

Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
              A + +  L ++  E ++   E+E +I    E  Q  + E+ ++Q +     ++ EE 
Sbjct: 908 YAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEE 967

Query: 499 RKSRKEA 505
             +R++ 
Sbjct: 968 EAARQKL 974

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
           +IGEG +G I++G  LL + QVAIK     S     + + E      +     +  V   
Sbjct: 17  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYF 74

Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           G       LV + L  G SLED L         S +T    A ++ + +  +H     S+
Sbjct: 75  GQEGLHNVLVIDLL--GPSLEDLL--DLCGRKFSVKTVAMAAKQMLARVQSIHE---KSL 127

Query: 649 VHGDLKPANILL------DANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPK--GTF 699
           V+ D+KP N L+      +AN +  + DFG+   +            +  R      GT 
Sbjct: 128 VYRDIKPDNFLIGRPNSKNANMIY-VVDFGMVKFYRD----PVTKQHIPYREKKNLSGTA 182

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            YM        E + + D+ + G + +  L G 
Sbjct: 183 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 215

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 29/213 (13%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH----PNLVTL 588
           KIG G +G +  G  L  +  VAIK+    S     +   E     ++      P +   
Sbjct: 16  KIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYF 73

Query: 589 VGACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
            G C +   +V E L  G SLED     D +   S +T + IA +L S + ++HS    +
Sbjct: 74  -GPCGKYNAMVLELL--GPSLEDLFDLCDRT--FSLKTVLMIAIQLISRMEYVHS---KN 125

Query: 648 IVHGDLKPANILLDANFVSK-----LSDFGIS-RFLSQNEISSNNTTLCCRTDPK--GTF 699
           +++ D+KP N L+            + DF ++  ++           +  R      GT 
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE----TKKHIPYREHKSLTGTA 181

Query: 700 AYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
            YM        E + + D+ + G + +  L G 
Sbjct: 182 RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 214

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
           KIG G +G IY G  +  + +VAIK+ +  +     +   E  I   ++    +  V   
Sbjct: 14  KIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWF 71

Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
           G   +   LV + L  G SLED       S  LS +T + +A ++ + + F+HS    S 
Sbjct: 72  GVEGDYNVLVMDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMINRVEFVHS---KSF 124

Query: 649 VHGDLKPANILL----DANFVSKLSDFGIS-RFLSQNEISSNNTTLCCRTDPK--GTFAY 701
           +H D+KP N L+     AN V  + DFG++ ++   +     +  +  R +    GT  Y
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVY-IIDFGLAKKYRDTS----THQHIPYRENKNLTGTARY 179

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGR 732
                    E + + D+ S G +L+  L G 
Sbjct: 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 57.0 bits (137), Expect = 7e-09
 Identities = 25/145 (17%), Positives = 55/145 (37%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
           ++LA A+ + E + + A E        E  A +   + +  E    E     ++ +    
Sbjct: 104 ERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYE 163

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
               +L  ++   +   E  +++  + + LE +I       K LE +     +    Y++
Sbjct: 164 EVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEE 223

Query: 480 EQDELQMERDKAVKEAEELRKSRKE 504
           E   L  +  +A   AE   +S  +
Sbjct: 224 EIKVLSDKLKEAETRAEFAERSVTK 248

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 22/147 (14%), Positives = 62/147 (42%), Gaps = 2/147 (1%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
             A+A  +A   R +  E+ L   + +  A E             +  ++ +  E+   +
Sbjct: 23  DEAEADKKAAEDRSKQLEDELVSLQKKLKATED--ELDKYSEALKDAQEKLELAEKKATD 80

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + ++  + ++     EEL  A ++ +    ++ E+++ A E E+ +       Q  +++
Sbjct: 81  AEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEK 140

Query: 481 QDELQMERDKAVKEAEELRKSRKEASS 507
            +  +++  +A   AE+  +  +E + 
Sbjct: 141 MEIQEIQLKEAKHIAEDADRKYEEVAR 167

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 32/143 (22%), Positives = 66/143 (46%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
           +    QL +A   AE++ R+  E A +    E D   +  RA+ SE   AE  +  K   
Sbjct: 142 EIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVT 201

Query: 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQ 475
             L + + + E+  ++ D+  EE+++  D+    E++   ++++  +LE+ I    + L 
Sbjct: 202 NNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELY 261

Query: 476 NYKKEQDELQMERDKAVKEAEEL 498
             K +   +  E D A+ +   +
Sbjct: 262 AQKLKYKAISEELDHALNDMTSI 284

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 50.8 bits (121), Expect = 8e-07
 Identities = 22/146 (15%), Positives = 50/146 (34%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
            +  +   + E    +  E       A++   E  R+    ES      +R +  E   A
Sbjct: 132 SRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCA 191

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
             + E++ +      +  + +    ++   E +I       KE E +   A   +   +K
Sbjct: 192 ELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEK 251

Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
             D+L+ E      + + + +    A
Sbjct: 252 SIDDLEDELYAQKLKYKAISEELDHA 277

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 50.4 bits (120), Expect = 9e-07
 Identities = 22/148 (14%), Positives = 54/148 (36%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           ++     + EN+   A E    +  AE  + +      + +           ++ EAL +
Sbjct: 7   KMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKD 66

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + +LE  +K+  +   ++     +  L E ++  + +      QK+  A +     ++ 
Sbjct: 67  AQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERG 126

Query: 481 QDELQMERDKAVKEAEELRKSRKEASSS 508
              ++    K  ++ E      KEA   
Sbjct: 127 MKVIESRAQKDEEKMEIQEIQLKEAKHI 154

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 20/151 (13%), Positives = 55/151 (36%)

Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
              D+L +     ++++ +      +   AE D     RR +  E       +R     +
Sbjct: 52  ATEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQ 111

Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
            L   +   +  ++    +    Q   ++  + E Q+ E+   A++ ++K       L  
Sbjct: 112 KLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVI 171

Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEASS 507
            + + +  +   + +  +  EL +  K  ++
Sbjct: 172 IESDLERAEERAELSEGKCAELEEEIKTVTN 202

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 20/146 (13%), Positives = 51/146 (34%), Gaps = 2/146 (1%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           ++ ++ A+ +  + E  E  L+  K   +  +  R+ +             +  EE    
Sbjct: 128 KVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD--RKYEEVARKLVIIESDLERAEERAEL 185

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + +   ++++   V   L+    Q      +  + ++  K L  K+  A    +  ++ 
Sbjct: 186 SEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERS 245

Query: 481 QDELQMERDKAVKEAEELRKSRKEAS 506
             +L+   D    E    +   K  S
Sbjct: 246 VTKLEKSIDDLEDELYAQKLKYKAIS 271

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 22/148 (14%), Positives = 63/148 (42%), Gaps = 3/148 (2%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
             L + +   E+   +   EAL+  + + +  E  ++A  +E+  A   +R + FEE L 
Sbjct: 44  VSLQKKLKATEDELDKY-SEALKDAQEKLELAE--KKATDAEADVASLNRRIQLFEEELD 100

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
             +  L    ++ +E  +    +     ++ES+  + ++  +  E ++  A  + ++  +
Sbjct: 101 RAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADR 160

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASS 507
           + +E+  +      + E   +  + +  
Sbjct: 161 KYEEVARKLVIIESDLERAEERAELSEG 188

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 17/83 (20%), Positives = 41/83 (49%)

Query: 425 LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDEL 484
           ++ +KK+   +  + + ALD+    E+    ++  +K+LE +++S  + L+  + E D+ 
Sbjct: 1   MDAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKY 60

Query: 485 QMERDKAVKEAEELRKSRKEASS 507
                 A ++ E   K   +A +
Sbjct: 61  SEALKDAQEKLELAEKKATDAEA 83

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 22/159 (13%), Positives = 60/159 (37%), Gaps = 7/159 (4%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
           +    +   A A+  +  R          +A++    ++++ + +E    E  +  K  E
Sbjct: 72  ELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIE 131

Query: 416 EALANGKLELERMKKQHDEV---MEELQIALD----QKSLLESQIAESDQTAKELEQKII 468
                 + ++E  + Q  E     E+     +    +  ++ES +  +++ A+  E K  
Sbjct: 132 SRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCA 191

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
              E ++        L+ + +K  ++ ++  +  K  S 
Sbjct: 192 ELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSD 230

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 58.6 bits (142), Expect = 7e-09
 Identities = 24/149 (16%), Positives = 61/149 (40%), Gaps = 1/149 (0%)

Query: 361  QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEALA 419
             L   +      RR   +  L++ K E  ++E  ++          +L+R+  E  +   
Sbjct: 886  TLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYK 945

Query: 420  NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
            +   ++  ++  +    E+L+  +++  + E +   +      L+++I    + L   + 
Sbjct: 946  SLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT 1005

Query: 480  EQDELQMERDKAVKEAEELRKSRKEASSS 508
            E+  ++   DK   E E+L    KE ++ 
Sbjct: 1006 EKKTIEEWADKYKHETEQLVSELKEQNTL 1034

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 54.7 bits (132), Expect = 1e-07
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 14/158 (8%)

Query: 361  QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
            +      + E    E +++       E   ++  R+       Y   L++    E   + 
Sbjct: 903  KRELKKLKIEARSVERYKKL--HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST 960

Query: 421  GKLEL----ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
               +L    ER++       EE + A ++   L+ +IA+  +   + + +  +  E    
Sbjct: 961  ETEKLRSDVERLRMS----EEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADK 1016

Query: 477  YKKEQDELQMERDKAV----KEAEELRKSRKEASSSSH 510
            YK E ++L  E  +       E EEL +   + +    
Sbjct: 1017 YKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 52.8 bits (127), Expect = 4e-07
 Identities = 24/147 (16%), Positives = 58/147 (39%), Gaps = 3/147 (2%)

Query: 361  QLAQAMAEAENSRREAFEEALRRGKAEKDAIES-IRRAKASESLYAEELKRRKEFEEALA 419
            +  +++   ++ R         R       ++   RR  A   L   +++ R        
Sbjct: 863  REHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKL 922

Query: 420  NGKLE--LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
            +  LE  + +++++ DE  +E +  L++ + LE   +   +  +   +++  + E  +N 
Sbjct: 923  HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNA 982

Query: 478  KKEQDELQMERDKAVKEAEELRKSRKE 504
                  LQ E  K  KE  + +  +K 
Sbjct: 983  TNRVLSLQEEIAKLRKELHQTQTEKKT 1009

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 52.0 bits (125), Expect = 7e-07
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 14/173 (8%)

Query: 342 LQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE 401
           +Q      +       + D      A           + + R       I+   R   + 
Sbjct: 822 IQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSI-IIQKHVRGWLAR 880

Query: 402 SLYAEELKRR----KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESD 457
             Y   LK        +   +A  K EL+++K +   V    ++       LE++I +  
Sbjct: 881 VHYHRTLKAIVYLQCCYRRMMA--KRELKKLKIEARSVERYKKL----HIGLENKIMQLQ 934

Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH 510
           +   E  ++      LL+     +     E +K   + E LR S +EA ++++
Sbjct: 935 RKIDEQNKEY---KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATN 984

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.3 bits (118), Expect = 5e-06
 Identities = 14/145 (9%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
           +        +    ++ +R   A      +++     +  Y   + +R+  +  +    +
Sbjct: 857 KYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSV 916

Query: 424 E-LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
           E  +++    +  + +LQ  +D+      +     +    LE          +  + + +
Sbjct: 917 ERYKKLHIGLENKIMQLQRKIDE---QNKEYKSLLEKMNNLEITY---STETEKLRSDVE 970

Query: 483 ELQMERDKAVKEAEELRKSRKEASS 507
            L+M  ++A      +   ++E + 
Sbjct: 971 RLRMSEEEAKNATNRVLSLQEEIAK 995

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 47.0 bits (112), Expect = 2e-05
 Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 364  QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
            +     E  +  +  E LR  + E     +   +        EE+ + ++        K 
Sbjct: 955  EITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQ------EEIAKLRKELHQTQTEKK 1008

Query: 424  ELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
             +E    ++    E+L   L  Q +LL+++  E ++   +  ++I   +E  +   +E  
Sbjct: 1009 TIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETME--KKLVEETK 1066

Query: 483  ELQMERDKAVKEAE 496
            +L+++ +      +
Sbjct: 1067 QLELDLNDERLRYQ 1080

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 54.3 bits (131), Expect = 8e-08
 Identities = 57/246 (23%), Positives = 90/246 (36%), Gaps = 77/246 (31%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKML---HPHSLQGPSEFQQEIDILSKIRH-----PN 584
           K+G+G +G +     +      A+K++     ++       + E DIL KI++      N
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA----KIEADILKKIQNDDINNNN 97

Query: 585 LVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIR-IATELCS 635
           +V   G        C     L++E L   SL + +    N+      +  I+    E+  
Sbjct: 98  IVKYHGKFMYYDHMC-----LIFEPL-GPSLYEII--TRNNYNGFHIE-DIKLYCIEILK 148

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVS-------------------------KLSD 670
            L +L       + H DLKP NILLD  +                           KL D
Sbjct: 149 ALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205

Query: 671 FGISRFLSQNE---ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 727
           FG + F S      I++       R        Y  PE + +      SD++SFG +L  
Sbjct: 206 FGCATFKSDYHGSIINT-------RQ-------YRAPEVILNLGWDVSSDMWSFGCVLAE 251

Query: 728 LLTGRP 733
           L TG  
Sbjct: 252 LYTGSL 257

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 54.1 bits (130), Expect = 9e-08
 Identities = 51/271 (18%), Positives = 86/271 (31%), Gaps = 95/271 (35%)

Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF-QQEIDILSKIR-----HPN-- 584
           K+G G + +++    +     VA+K++   S +  +E    EI +L  +R      PN  
Sbjct: 44  KLGWGHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNRE 101

Query: 585 -LVTLVGA-----------CPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIAT 631
            +V L+             C     +V+E L  G  L      K N   L      +I  
Sbjct: 102 MVVQLLDDFKISGVNGTHIC-----MVFEVL--GHHLLK-WIIKSNYQGLPLPCVKKIIQ 153

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILL------------------------------- 660
           ++   L +LH+     I+H D+KP NILL                               
Sbjct: 154 QVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 211

Query: 661 ------------------DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                                   K++D G + ++ +             T+   T  Y 
Sbjct: 212 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----------HFTEDIQTRQYR 260

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             E L        +D++S   +   L TG  
Sbjct: 261 SLEVLIGSGYNTPADIWSTACMAFELATGDY 291

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 52.7 bits (127), Expect = 2e-07
 Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 69/240 (28%)

Query: 535 KIGEGGYGSIYKGLLRHMQ---VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP----- 583
            +GEG +G + + +        VA+K++           +    EI +L  +        
Sbjct: 21  TLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNST 76

Query: 584 -NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIR-IATEL 633
              V ++         C     +V+E L   S  D +  K+N   P      IR +A ++
Sbjct: 77  FRCVQMLEWFEHHGHIC-----IVFELL-GLSTYDFI--KENGFLPFRLD-HIRKMAYQI 127

Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVS-------------------KLSDFGIS 674
           C  + FLHS K   + H DLKP NIL   +  +                   K+ DFG +
Sbjct: 128 CKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

Query: 675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPE-FLASGELTPKSDVYSFGIILLRLLTGRP 733
            +  ++      T +  R        Y  PE  LA G   P  DV+S G IL+    G  
Sbjct: 185 TYDDEHHS----TLVSTR------H-YRAPEVILALGWSQP-CDVWSIGCILIEYYLGFT 232

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 52.3 bits (126), Expect = 3e-07
 Identities = 50/240 (20%), Positives = 84/240 (35%), Gaps = 69/240 (28%)

Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP----- 583
            +GEG +G + + L       QVA+K++           +    EI++L KI+       
Sbjct: 26  NLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENK 81

Query: 584 -NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
              V +          C     + +E L   +  +    ++N  P        +A +LC 
Sbjct: 82  FLCVLMSDWFNFHGHMC-----IAFELL-GKNTFE-FLKENNFQPYPLPHVRHMAYQLCH 134

Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVS-------------------KLSDFGISRF 676
            L FLH  +   + H DLKP NIL   +                      +++DFG + F
Sbjct: 135 ALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191

Query: 677 LSQNE---ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
             ++    +++       R        Y  PE +         DV+S G IL     G  
Sbjct: 192 DHEHHTTIVAT-------R------H-YRPPEVILELGWAQPCDVWSIGCILFEYYRGFT 237

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 50.2 bits (119), Expect = 5e-07
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 431 QHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIIS-AVELLQNYKKEQDELQMERD 489
           Q D + +E +     +     ++ E D  +K +EQ+    A + L+ + + Q E Q+E++
Sbjct: 76  QADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSE-QVEKN 134

Query: 490 KAV--KEAEELRKSRKE 504
           K       +   +    
Sbjct: 135 KINNRIADKAFYQQPDA 151

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 33/110 (30%)

Query: 361 QLAQAMAEAENSR--REAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
           Q  +   E E+ R  RE   + L     E DA   +           +E +     E+A 
Sbjct: 76  QADRLTQEPESIRKWREEQRKRL----QELDAASKVME---------QEWR-----EKA- 116

Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
              K +LE   ++  E +E        K+ + ++IA+     ++ +  II
Sbjct: 117 ---KKDLEEWNQRQSEQVE--------KNKINNRIAD-KAFYQQPDADII 154

>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A Length = 61

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 821 YFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVP 873
           +  C I  +V + P ++      +E   L+ ++       P+TN PL+ + +V 
Sbjct: 3   HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVE 55

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 50.2 bits (119), Expect = 3e-06
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 8/140 (5%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           Q     +EAE +R+E  E      +A   A+ES   AKA     AE    R E E ++  
Sbjct: 691 QKILDQSEAEKARKELLEL-----EAMSMAVESTGNAKAEAESRAEA--ARIEGEGSVLQ 743

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQT-AKELEQKIISAVELLQNYKK 479
            KL+ + +  + +  +E ++   + + +      E + + A++L        + +     
Sbjct: 744 AKLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALG 803

Query: 480 EQDELQMERDKAVKEAEELR 499
                 +       + + L+
Sbjct: 804 PGTIRDLAVAGPEMQVKLLQ 823

>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 26/145 (17%), Positives = 60/145 (41%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           ++ Q   + E    + +       + +K    +  RA+ SE   AE  +  K     L +
Sbjct: 1   RMKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKS 60

Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
            + + E+  ++ D+  EE+++  D+    E++   ++++  +LE+ I    + L   K +
Sbjct: 61  LEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK 120

Query: 481 QDELQMERDKAVKEAEELRKSRKEA 505
              +  E  +   + EEL       
Sbjct: 121 YKAISEEMKQLEDKVEELLSKNYHL 145

>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 18/144 (12%), Positives = 50/144 (34%), Gaps = 9/144 (6%)

Query: 370 ENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG---KLELE 426
           +    + +   L        A   +      E + A+         E ++     K E E
Sbjct: 124 KTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYE 183

Query: 427 RMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL------LQNYKKE 480
            +K++ +++ +    ++  +  +  ++        E+  +              +    E
Sbjct: 184 ELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLEVLFQGPRGSRYDEAEGRFEVINNE 243

Query: 481 QDELQMERDKAVKEAEELRKSRKE 504
            ++L+ E  K + +  +++K RKE
Sbjct: 244 TEQLKAEEKKILNQFLKIKKKRKE 267

>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 Length = 602

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 1/151 (0%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR-RKEF 414
               + L+    E EN R EA +       A +    +++  +A  +  A+  ++  +  
Sbjct: 56  TAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNADAADITRQEFRLL 115

Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
           +  L       E        +  E ++       L     E+    ++ E++   A    
Sbjct: 116 QAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNAD 175

Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
           +       E +  +        EL K+   A
Sbjct: 176 KKAADMLAEYERRKGILDTRLSELEKNGGAA 206

>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 7/155 (4%)

Query: 359 YDQLAQAMAEAENSRREAFEEAL-----RRGKAEKDAIESIRRAKA-SESLYAEELKRRK 412
           + +    + E +   RE  E  L     +  +  +D     +R K   E+L  +   +  
Sbjct: 26  FQEARDELVEFQEGSRE-LEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYA 84

Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
           +  + ++  + +L + +   +++ + ++        LE     +  + ++ EQ++  A+E
Sbjct: 85  QSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIE 144

Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
                + E DE +       +  +E R  R+E + 
Sbjct: 145 RNAFLESELDEKESLLVSVQRLKDEARDLRQELAV 179

>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae} Length = 267

 Score = 43.8 bits (102), Expect = 1e-04
 Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 822 FTCPIFQEVMQDPHVAAD-GFTYEAEALKGWLDSGHETS-PMT--NLPLAHKNLVPNLAL 877
            TCPI  +  + P ++      ++ + ++ +L        P    +  ++ ++ V +  +
Sbjct: 182 LTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIM 241

Query: 878 RSAIQEWLQQH 888
               +    + 
Sbjct: 242 ELRCKIAKMKE 252

>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592

 Score = 44.6 bits (104), Expect = 1e-04
 Identities = 21/164 (12%), Positives = 60/164 (36%), Gaps = 13/164 (7%)

Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
              Y    Q + + +    + +EE  +  +AE+     ++  ++      +  +   E E
Sbjct: 430 PGGYRLFVQKLQDLKK---KYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486

Query: 416 EALANGKLELERMKKQHDEVMEELQ-----IALDQKSLLESQIAESDQTAKELEQKIISA 470
           + +   +++ E  +     + E  +     +   ++S  E     +++   +  Q +   
Sbjct: 487 KEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQ 546

Query: 471 VELLQNYKKEQDEL-----QMERDKAVKEAEELRKSRKEASSSS 509
              L    +EQ++L     Q E      E ++L+   +   + +
Sbjct: 547 ERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACT 590

>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704

 Score = 44.2 bits (103), Expect = 2e-04
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%)

Query: 360 DQLAQAMAEAENSRREAFE---------EALRRGKAE-KDAIESIRRAKASESLYAEELK 409
                 + +A  +  +  E           L + + E   AI S   AK  +   +E + 
Sbjct: 499 TNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPSANPAKTMQG--SEVVN 556

Query: 410 RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIIS 469
             K     L   K E E ++     V  ++          +  I E   +  EL++    
Sbjct: 557 VLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTELDRVYGG 616

Query: 470 AVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
               +Q   K+Q+ L      + +E  ++++S  EA+
Sbjct: 617 LTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEAN 653

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 44.0 bits (102), Expect = 2e-04
 Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 8/166 (4%)

Query: 355 DDNLYDQLAQAMAEAENSRREAFEEALR-RGKAEKDAIESIRRAKASESLYAEELKRRKE 413
           +   Y +  + + +      +     L  R + EK   + +           E+  +   
Sbjct: 20  EVGNYKRTVKRIDDGHRLCSD-LMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGT 78

Query: 414 FEEALANGKLELERMKKQHDEVMEELQ------IALDQKSLLESQIAESDQTAKELEQKI 467
            E+A      E ER+ + H EV   L       I   QK     Q+    +  KE E   
Sbjct: 79  VEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGF 138

Query: 468 ISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
             A +      KE +  +     A KE +        + +   +  
Sbjct: 139 RKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNP 184

>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 22/121 (18%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 381 LRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQ 440
           L+  + EK+           +    +   RRKE EE       ++  + ++ +++  ++Q
Sbjct: 6   LKSAEREKEMASMKEEFTRLKEALEKSEARRKELEE-------KMVSLLQEKNDLQLQVQ 58

Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
              D  +  E +  +  +   +LE K+    + L++ ++   EL  ++ K   E  EL++
Sbjct: 59  AEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKR 118

Query: 501 S 501
            
Sbjct: 119 D 119

>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} Length = 279

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 16/144 (11%)

Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEA 417
            Y  LA    E E  R+E  E+ ++  K   +A++++RRA+      +E+L+ R +    
Sbjct: 99  YYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPE 158

Query: 418 LANGKLE------LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
            +  +         ER ++  +E   + Q A       ++ + E++   ++LE      V
Sbjct: 159 DSAPQASPGPSKQQERRRRSREEAQAKAQEAEAL---YQACVREANARQQDLEIAKQRIV 215

Query: 472 ELLQNYKKEQDELQMERDKAVKEA 495
             ++       +L  + D+ ++  
Sbjct: 216 SHVR-------KLVFQGDEVLRRV 232

>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Length = 256

 Score = 42.0 bits (98), Expect = 4e-04
 Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 5/97 (5%)

Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
              +E  + L     + E   K    + EE      Q S  E  + +++     +++K+ 
Sbjct: 25  PLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMS 84

Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
                    ++E   L +E D A + + +  +  +  
Sbjct: 85  EIKS-----ERELRSLNIEEDIAKERSNQANREIENL 116

>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene} Length = 240

 Score = 41.9 bits (97), Expect = 5e-04
 Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 5/146 (3%)

Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
           +LAQ M   + +R   F   L R + +    E +R+    E         +   E+    
Sbjct: 97  KLAQKMESNKENREAHFAAMLERLQEKDKHAEEVRQRAIEE----NNNWIKMAKEKLAQK 152

Query: 421 GKLELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
            +   E  K Q  E+++ L    + ++ +++  I E++   K  ++K+   +E  +  ++
Sbjct: 153 MESNKENRKYQEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENRE 212

Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
                 +ER +   +  E  +  KE 
Sbjct: 213 AHFAAMLERLQEKDKHAEEVRKNKEL 238

>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371

 Score = 42.5 bits (100), Expect = 5e-04
 Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 12/143 (8%)

Query: 366 MAEAENSRREAFEEAL----------RRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
           ++   + + E   + L          + G+  K+  + + R +   +   E LK R +  
Sbjct: 141 LSLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYKEESLKARLKEM 200

Query: 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQ 475
             L   K +L +  +  D+V         Q  L E  +    +   E   +       ++
Sbjct: 201 SNLEKEKEKLTKFVEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVE 260

Query: 476 NYKKEQDELQMERDKAVKEAEEL 498
               +  E+++     V   + L
Sbjct: 261 --LTKDFEVRVHAPNGVLTIDNL 281

>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} Length = 276

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 29/229 (12%), Positives = 77/229 (33%), Gaps = 28/229 (12%)

Query: 375 EAFEEALRRGKAEKDAIESIR-----RAKASESLYAEELKR----------RKEFEEALA 419
             F+      K  + + + +      RA   E  Y+  + +             F     
Sbjct: 18  SGFDVLYHNMKHGQISTKELADFVRERATI-EEAYSRSMTKLAKSASNYSQLGTFAPVWD 76

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
             K   E++   H +++ +LQ  + +   ++    E  ++ K+ ++++   +E +Q  + 
Sbjct: 77  VFKTSTEKLANCHLDLVRKLQELIKE---VQKYGEEQVKSHKKTKEEVAGTLEAVQTIQS 133

Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSE---------IEGATHNF 530
               LQ  ++    +  E  + +KE ++   + +       +             A  +F
Sbjct: 134 ITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADF 193

Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
           +  +      +  I +  L H++  I  L     +   +  Q  +    
Sbjct: 194 EQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFIN 242

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	888
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-64
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-56
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-54
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-54
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-54
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-54
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-54
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-53
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-53
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-53
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-52
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-52
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-52
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-52
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-51
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-51
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-50
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-50
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-50
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-50
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-50
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-49
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-48
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-48
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-47
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-46
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-46
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-46
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-46
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-45
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-45
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-45
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-44
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-44
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-43
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-43
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-40
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-40
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-40
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-40
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-39
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-39
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-38
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-38
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-38
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-37
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-37
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-36
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-35
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-35
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-34
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-34
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-34
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-33
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-32
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-31
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-30
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-29
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-28
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-27
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-25
d1t1ha_	78	g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cre	1e-20
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-18
d2c2la2	80	g.44.1.2 (A:225-304) STIP1 homology and U box-cont	2e-14
d1wgma_	98	g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Hu	1e-11
d1jm7a_	103	g.44.1.1 (A:) brca1 RING domain {Human (Homo sapie	2e-07
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	1e-05
d1eq1a_	166	a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [Ta	1e-04
d2baya1	56	g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {	5e-04
d2es4d1	280	a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)	8e-04
d2es4d1	280	a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)	0.002

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  215 bits (549), Expect = 2e-64
 Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 26/276 (9%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +IG G +G++YKG      VA+KML+  +   Q    F+ E+ +L K RH N++  +G  
Sbjct: 15  RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73

Query: 593 PEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
                 +V ++    SL   L              I IA +    + +LH     SI+H 
Sbjct: 74  TAPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL---A 708
           DLK  NI L  +   K+ DFG++   S+   S     L       G+  +M PE +    
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVIRMQD 182

Query: 709 SGELTPKSDVYSFGIILLRLLTGRP---ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
               + +SDVY+FGI+L  L+TG+     +    ++ + +  G L   L  +  + P   
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP--- 239

Query: 766 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
            + +  L   C +  R  RP     +   +E +  S
Sbjct: 240 -KAMKRLMAECLKKKRDERPLF-PQILASIELLARS 273

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (494), Expect = 1e-56
 Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 22/270 (8%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           ++G G +G ++ G    H +VA+K L   S   P  F  E +++ +++H  LV L     
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78

Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   ++ EY+ NGSL D L    +   L+    + +A ++   + F+      + +H D
Sbjct: 79  QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+      K++DFG++R +  NE          R   K    +  PE +  G  
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNE-------YTAREGAKFPIKWTAPEAINYGTF 187

Query: 713 TPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 771
           T KSDV+SFGI+L  ++T GR         +       ++NL        P    E+L  
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV------IQNLERGYRMVRPDNCPEELYQ 241

Query: 772 LAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
           L   C +   + RP     +  VLE    +
Sbjct: 242 LMRLCWKERPEDRPTF-DYLRSVLEDFFTA 270

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (477), Expect = 2e-54
 Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 28/269 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
            IG+G +G +  G  R  +VA+K +   +      F  E  +++++RH NLV L+G    
Sbjct: 14  TIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 71

Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
                 +V EY+  GSL D L  +  S  L     ++ + ++C  + +L     ++ VH 
Sbjct: 72  EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG---NNFVHR 127

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N+L+  + V+K+SDFG+++  S             +   K    +  PE L   +
Sbjct: 128 DLAARNVLVSEDNVAKVSDFGLTKEASST-----------QDTGKLPVKWTAPEALREKK 176

Query: 712 LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 770
            + KSDV+SFGI+L  + + GR                 +  +      D P      + 
Sbjct: 177 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV------VPRVEKGYKMDAPDGCPPAVY 230

Query: 771 NLAMRCCEMSRKSRPELGKDVWRVLEPMR 799
            +   C  +    RP     +   LE ++
Sbjct: 231 EVMKNCWHLDAAMRPSF-LQLREQLEHIK 258

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (481), Expect = 2e-54
 Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSK 579
           +E    +F+   ++G G  G ++K   +   + +A K++H        ++  +E+ +L +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 580 IRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
              P +V   GA       ++  E++  GSL+  L     +  +  Q   +++  +   L
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117

Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            +L     H I+H D+KP+NIL+++    KL DFG+S  L  +                G
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFVG 165

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           T +YM PE L     + +SD++S G+ L+ +  GR 
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  188 bits (477), Expect = 4e-54
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 35/304 (11%)

Query: 514 FFSDFSFSEIEGATHNFDPSL---------KIGEGGYGSIYKGLLR-----HMQVAIKML 559
           F   F+F +   A   F   +          IG G +G +  G L+      + VAIK L
Sbjct: 3   FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 62

Query: 560 HP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKD 616
              ++ +   +F  E  I+ +  HPN++ L G         ++ E++ NGSL+     + 
Sbjct: 63  KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF--LRQ 120

Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 676
           N    +    + +   + + + +L      + VH DL   NIL+++N V K+SDFG+SRF
Sbjct: 121 NDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 177

Query: 677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPA 734
           L  +   +++ T       K    +  PE +   + T  SDV+S+GI++  +++   RP 
Sbjct: 178 LEDD---TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 234

Query: 735 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 794
             +T +         +  +        P      L  L + C +  R  RP+    +   
Sbjct: 235 WDMTNQDV-------INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF-GQIVNT 286

Query: 795 LEPM 798
           L+ M
Sbjct: 287 LDKM 290

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (474), Expect = 6e-54
 Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 20/269 (7%)

Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           K+G+G +G ++ G      +VAIK L P +   P  F QE  ++ K+RH  LV L     
Sbjct: 24  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 82

Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
            E   +V EY+  GSL       +    L     + +A ++ S + ++      + VH D
Sbjct: 83  EEPIYIVTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 138

Query: 653 LKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL 712
           L+ ANIL+  N V K++DFG++R +  NE ++       R   K    +  PE    G  
Sbjct: 139 LRAANILVGENLVCKVADFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRF 191

Query: 713 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 772
           T KSDV+SFGI+L  L T           +  LD    +    P   + P    E L +L
Sbjct: 192 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECP----ESLHDL 246

Query: 773 AMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
             +C     + RP   + +   LE    S
Sbjct: 247 MCQCWRKEPEERPTF-EYLQAFLEDYFTS 274

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (472), Expect = 8e-54
 Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 22/270 (8%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
           +IG G +G ++ G   +   VAIK +   +     +F +E +++ K+ HP LV L G C 
Sbjct: 12  EIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70

Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
                 LV+E++ +G L D    +      + +T + +  ++C  +      +   ++H 
Sbjct: 71  EQAPICLVFEFMEHGCLSDY--LRTQRGLFAAETLLGMCLDVCEGM---AYLEEACVIHR 125

Query: 652 DLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE 711
           DL   N L+  N V K+SDFG++RF+  ++ +S+  T       K    +  PE  +   
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT-------KFPVKWASPEVFSFSR 178

Query: 712 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 771
            + KSDV+SFG+++  + +        +          ++++        P + +  +  
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQ 233

Query: 772 LAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
           +   C +   + RP     + R L  +  S
Sbjct: 234 IMNHCWKERPEDRPAF-SRLLRQLAEIAES 262

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (470), Expect = 3e-53
 Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 42/297 (14%)

Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
            IG+G +G +++G  R  +VA+K+      +     + EI     +RH N++  + A   
Sbjct: 10  SIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNK 68

Query: 593 ----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-----C 643
                    LV +Y  +GSL D L    N   ++ +  I++A    S L  LH       
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
              +I H DLK  NIL+  N    ++D G++        S+ +T         GT  YM 
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD----SATDTIDIAPNHRVGTKRYMA 180

Query: 704 PEFLAS------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-------------A 744
           PE L         E   ++D+Y+ G++   +       GI ++ Q               
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240

Query: 745 LDTGKLKNLLDP-LAGDWPFVQA-EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 799
           +     +  L P +   W   +A   +A +   C   +  +R      + + L  + 
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLS 296

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 5e-53
 Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 30/262 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
           +IG G + ++YKGL     ++VA   L    L       F++E ++L  ++HPN+V    
Sbjct: 16  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 75

Query: 591 AC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           +        +   LV E + +G+L+  L        +  +       ++   L FLH+  
Sbjct: 76  SWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHTRT 132

Query: 645 PHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           P  I+H DLK  NI +       K+ D G++        +S    +       GT  +M 
Sbjct: 133 PP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVI------GTPEFMA 181

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 763
           PE +   +     DVY+FG+ +L + T        +         ++ + + P    +  
Sbjct: 182 PE-MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR--RVTSGVKPA--SFDK 236

Query: 764 VQAEQLANLAMRCCEMSRKSRP 785
           V   ++  +   C   ++  R 
Sbjct: 237 VAIPEVKEIIEGCIRQNKDERY 258

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  184 bits (467), Expect = 6e-53
 Identities = 72/288 (25%), Positives = 140/288 (48%), Gaps = 24/288 (8%)

Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQE 573
           S  ++ + E    +     K+G G YG +Y+G+ +   + VA+K L   +++   EF +E
Sbjct: 5   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKE 63

Query: 574 IDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
             ++ +I+HPNLV L+G C     + ++ E++  G+L D L  + N   +S    + +AT
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 122

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
           ++ S + +L      + +H DL   N L+  N + K++DFG+SR ++ +  +++      
Sbjct: 123 QISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA--- 176

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 751
               K    +  PE LA  + + KSDV++FG++L  + T   +          +D  ++ 
Sbjct: 177 ----KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVY 226

Query: 752 NLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
            LL+     + P    E++  L   C + +   RP    ++ +  E M
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETM 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 1e-52
 Identities = 57/270 (21%), Positives = 110/270 (40%), Gaps = 24/270 (8%)

Query: 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
           +++G G +GS+ +G+ R     + VAIK+L   + +    E  +E  I+ ++ +P +V L
Sbjct: 15  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 74

Query: 589 VGACPEV-WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C      LV E    G L   L        +       +  ++   + +L      +
Sbjct: 75  IGVCQAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLE---EKN 129

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L  ++      +            +  PE +
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK-----WPLKWYAPECI 184

Query: 708 ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 766
              + + +SDV+S+G+ +   L+ G+      K  +       +  +      + P    
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------MAFIEQGKRMECPPECP 238

Query: 767 EQLANLAMRCCEMSRKSRPELGKDVWRVLE 796
            +L  L   C     + RP+    V + + 
Sbjct: 239 PELYALMSDCWIYKWEDRPDF-LTVEQRMR 267

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 2e-52
 Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 23/272 (8%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
           +     ++G G +G +  G  R    VAIKM+   S     EF +E  ++  + H  LV 
Sbjct: 5   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L G C       ++ EY+ NG L + L    +      Q  + +  ++C  + +L     
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLE---S 118

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H DL   N L++   V K+SDFG+SR++  +E +S           K    +  PE
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-------SVGSKFPVRWSPPE 171

Query: 706 FLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
            L   + + KSD+++FG+++  + + G+         +        +++   L    P +
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET------AEHIAQGLRLYRPHL 225

Query: 765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 796
            +E++  +   C       RP     +  +L+
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 3e-52
 Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 30/274 (10%)

Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
           ++G G +G++ KG  +       VA+K+L   +       E   E +++ ++ +P +V +
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G C  E W LV E    G L   L     +  +  +  I +  ++   + +L      +
Sbjct: 74  IGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---ESN 127

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH DL   N+LL     +K+SDFG+S+ L      ++      +T  K    +  PE +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALR-----ADENYYKAQTHGKWPVKWYAPECI 182

Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFV 764
              + + KSDV+SFG+++    +   +P  G+   EV   L+ G+            P  
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE----RMGCPAGCP-- 236

Query: 765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
              ++ +L   C     ++RP     V   L   
Sbjct: 237 --REMYDLMNLCWTYDVENRPGF-AAVELRLRNY 267

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 7e-52
 Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 25/268 (9%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPN 584
           +++    IG G YG   K   +     +  K L   S+          E+++L +++HPN
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 585 LVTLVGAC----PEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
           +V               +V EY   G L   ++        L  +  +R+ T+L   L  
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124

Query: 640 LH--SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 697
            H  S   H+++H DLKPAN+ LD     KL DFG++R L+ +  +S             
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFVG------ 176

Query: 698 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 757
           T  YM PE +       KSD++S G +L  L    P      + +          + +  
Sbjct: 177 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL------AGKIREGK 230

Query: 758 AGDWPFVQAEQLANLAMRCCEMSRKSRP 785
               P+  +++L  +  R   +    RP
Sbjct: 231 FRRIPYRYSDELNEIITRMLNLKDYHRP 258

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 3e-51
 Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 26/260 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G+G +G +YK   +      A K++   S +   ++  EIDIL+   HPN+V L+ A 
Sbjct: 19  ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 78

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  ++ E+   G+++  +   +   PL+      +  +    L +LH    + I+H
Sbjct: 79  YYENNLWILIEFCAGGAVDAVM--LELERPLTESQIQVVCKQTLDALNYLHD---NKIIH 133

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS- 709
            DLK  NIL   +   KL+DFG+S   ++        T+  R    GT  +M PE +   
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTR--------TIQRRDSFIGTPYWMAPEVVMCE 185

Query: 710 ----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
                    K+DV+S GI L+ +    P       ++  L   K +         W    
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS--- 242

Query: 766 AEQLANLAMRCCEMSRKSRP 785
                +   +C E +  +R 
Sbjct: 243 -SNFKDFLKKCLEKNVDARW 261

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 4e-51
 Identities = 71/274 (25%), Positives = 113/274 (41%), Gaps = 27/274 (9%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNL 585
           ++D    +GEG YG +   + R     VA+K++    ++  P   ++EI I   + H N+
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
           V   G      +  L  EY   G L DR+        +      R   +L + +++LH  
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG- 121

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I H D+KP N+LLD     K+SDFG++     N        +C      GT  Y+ 
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVA 173

Query: 704 PEFLASGEL-TPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   E      DV+S GI+L  +L G       +   Q   D  + K  L+P    W
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----W 229

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP---ELGKDVW 792
             + +     L  +    +  +R    ++ KD W
Sbjct: 230 KKIDSA-PLALLHKILVENPSARITIPDIKKDRW 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (452), Expect = 1e-50
 Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 26/277 (9%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
            IG G +G +Y G L       +  A+K L+  +  G  S+F  E  I+    HPN+++L
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93

Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           +G C        +V  Y+ +G L +    ++ +   + +  I    ++   +        
Sbjct: 94  LGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGM---KFLAS 148

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              VH DL   N +LD  F  K++DFG++R +   E      ++  +T  K    +M  E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF----DSVHNKTGAKLPVKWMALE 204

Query: 706 FLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
            L + + T KSDV+SFG++L  L+T G P           +   + + LL P     P  
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP--EYCP-- 260

Query: 765 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
             + L  + ++C     + RP    ++   +  + ++
Sbjct: 261 --DPLYEVMLKCWHPKAEMRPSF-SELVSRISAIFST 294

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 2e-50
 Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 23/260 (8%)

Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLV 586
           K+G+G +G + +G       + + VA+K L P  L   +   +F +E++ +  + H NL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74

Query: 587 TLVGACPEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
            L G        +V E  P GSL DR   + +       T  R A ++   + +L S   
Sbjct: 75  RLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSRYAVQVAEGMGYLES--- 129

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
              +H DL   N+LL    + K+ DFG+ R L QN+                 FA+  PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK-----VPFAWCAPE 184

Query: 706 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
            L +   +  SD + FG+ L  + T      I       L     +    P   D P   
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP--- 241

Query: 766 AEQLANLAMRCCEMSRKSRP 785
            + + N+ ++C     + RP
Sbjct: 242 -QDIYNVMVQCWAHKPEDRP 260

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 3e-50
 Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 27/290 (9%)

Query: 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQG-PSEFQQE 573
           +EI            IG G +G +YKG+L+       + VAIK L     +    +F  E
Sbjct: 2   TEIH--PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE 59

Query: 574 IDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
             I+ +  H N++ L G   +     ++ EY+ NG+L+     ++     S    + +  
Sbjct: 60  AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF--LREKDGEFSVLQLVGMLR 117

Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 691
            + + + +L +      VH DL   NIL+++N V K+SDFG+SR L  +  ++  T+   
Sbjct: 118 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 174

Query: 692 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 751
                    +  PE ++  + T  SDV+SFGI++  ++T                   +K
Sbjct: 175 -----IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-----MK 224

Query: 752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 801
            + D      P      +  L M+C +  R  RP+   D+  +L+ +  +
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKF-ADIVSILDKLIRA 273

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (443), Expect = 7e-50
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 30/264 (11%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
           +F+    +G+G +G++Y    +     +A+K+L    L+      + ++E++I S +RHP
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           N++ L G         L+ EY P G++   L           Q      TEL + L + H
Sbjct: 67  NILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH 123

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S     ++H D+KP N+LL +    K++DFG S        SS  TTLC      GT  Y
Sbjct: 124 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC------GTLDY 170

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 761
           + PE +       K D++S G++    L G+P          A    +    +  +   +
Sbjct: 171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFTF 223

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    E   +L  R  + +   RP
Sbjct: 224 PDFVTEGARDLISRLLKHNPSQRP 247

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  176 bits (447), Expect = 8e-50
 Identities = 65/261 (24%), Positives = 100/261 (38%), Gaps = 33/261 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLV 589
           +IG G +G++Y          VAIK +     Q      +  +E+  L K+RHPN +   
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           G         LV EY    + +     + +  PL       +       L +LHS   H+
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDL---LEVHKKPLQEVEIAAVTHGALQGLAYLHS---HN 135

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
           ++H D+K  NILL    + KL DFG +  ++                  GT  +M PE +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------NSFVGTPYWMAPEVI 183

Query: 708 AS---GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
            +   G+   K DV+S GI  + L   +P L     +  AL            +G W   
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWS-- 240

Query: 765 QAEQLANLAMRCCEMSRKSRP 785
             E   N    C +   + RP
Sbjct: 241 --EYFRNFVDSCLQKIPQDRP 259

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  175 bits (443), Expect = 1e-49
 Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 50/315 (15%)

Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQG-PS 568
           +     +E   +N +    IGEG +G +++     +        VA+KML   +     +
Sbjct: 2   NPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 61

Query: 569 EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------- 612
           +FQ+E  ++++  +PN+V L+G C   +   L++EY+  G L + L              
Sbjct: 62  DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 121

Query: 613 -------SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665
                        PPLS   ++ IA ++ + + +L   K    VH DL   N L+  N V
Sbjct: 122 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMV 178

Query: 666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIIL 725
            K++DFG+SR +   +    +              +M PE +     T +SDV+++G++L
Sbjct: 179 VKIADFGLSRNIYSADYYKADGNDA------IPIRWMPPESIFYNRYTTESDVWAYGVVL 232

Query: 726 LRLLTGR--PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 783
             + +    P  G+  E         +  + D      P     +L NL   C       
Sbjct: 233 WEIFSYGLQPYYGMAHEEV-------IYYVRDGNILACPENCPLELYNLMRLCWSKLPAD 285

Query: 784 RPELGKDVWRVLEPM 798
           RP     + R+L+ M
Sbjct: 286 RPSF-CSIHRILQRM 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 4e-48
 Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 48/284 (16%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKI-RHPNL 585
            +G G +G +              +QVA+KML   +          E+ +++++  H N+
Sbjct: 44  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK--------------------DNSPPLSW 623
           V L+GAC       L++EY   G L + L  K                    ++   L++
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 163

Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 683
           +  +  A ++   + FL      S VH DL   N+L+    V K+ DFG++R +  +   
Sbjct: 164 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 220

Query: 684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEV 741
                            +M PE L  G  T KSDV+S+GI+L  + +    P  GI  + 
Sbjct: 221 VVRGNAR------LPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 742 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
            +       K + +    D PF   E++  +   C     + RP
Sbjct: 275 NF------YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP 312

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 7e-48
 Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 23/255 (9%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG+G  G++Y  +      +VAI+ ++            EI ++ + ++PN+V  + + 
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              +   +V EYL  GSL D ++       +       +  E    L FLHS   + ++H
Sbjct: 87  LVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIH 139

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            D+K  NILL  +   KL+DFG    ++  +          R+   GT  +M PE +   
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--------SKRSTMVGTPYWMAPEVVTRK 191

Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 770
              PK D++S GI+ + ++ G P       ++       +     P   +   + A    
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAI-FR 247

Query: 771 NLAMRCCEMSRKSRP 785
           +   RC +M  + R 
Sbjct: 248 DFLNRCLDMDVEKRG 262

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 3e-47
 Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
            IGEG +G +++G+        + VAIK     +     E F QE   + +  HP++V L
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73

Query: 589 VGACPEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
           +G   E    ++ E    G L      +     L   + I  A +L + L +L S +   
Sbjct: 74  IGVITENPVWIIMELCTLGELRSF--LQVRKYSLDLASLILYAYQLSTALAYLESKR--- 128

Query: 648 IVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 707
            VH D+   N+L+ +N   KL DFG+SR++  +            +  K    +M PE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-------SKGKLPIKWMAPESI 181

Query: 708 ASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
                T  SDV+ FG+ +  +L    +P  G+                  P+  + P   
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGERLPMPPNCP--- 235

Query: 766 AEQLANLAMRCCEMSRKSRP---ELGKDVWRVLEPMRA 800
              L +L  +C       RP   EL   +  +LE  +A
Sbjct: 236 -PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 2e-46
 Identities = 74/308 (24%), Positives = 125/308 (40%), Gaps = 55/308 (17%)

Query: 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPH-SLQGPSE 569
           ++D  F +             IGEG +G + K  ++     M  AIK +  + S     +
Sbjct: 9   WNDIKFQD------------VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56

Query: 570 FQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------S 613
           F  E+++L K+  HPN++ L+GAC       L  EY P+G+L D L              
Sbjct: 57  FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116

Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 673
               +  LS Q  +  A ++   + +L        +H DL   NIL+  N+V+K++DFG+
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 173

Query: 674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR- 732
           SR                +T  +    +M  E L     T  SDV+S+G++L  +++   
Sbjct: 174 SRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 224

Query: 733 -PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
            P  G+T    Y       + L      + P    +++ +L  +C       RP     +
Sbjct: 225 TPYCGMTCAELY-------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQI 276

Query: 792 WRVLEPMR 799
              L  M 
Sbjct: 277 LVSLNRML 284

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 4e-46
 Identities = 64/290 (22%), Positives = 117/290 (40%), Gaps = 40/290 (13%)

Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKI-RHPNL 585
            +G G +G + +            M VA+KML P +          E+ +LS +  H N+
Sbjct: 30  TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89

Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK---------------DNSPPLSWQTRIR 628
           V L+GAC       ++ EY   G L + L  K               D+   L  +  + 
Sbjct: 90  VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
            + ++   + FL S    + +H DL   NILL    ++K+ DFG++R +       N++ 
Sbjct: 150 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDI------KNDSN 200

Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 748
              + + +    +M PE + +   T +SDV+S+GI L  L +   +      V       
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF--- 257

Query: 749 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
             K + +      P     ++ ++   C +     RP   K + +++E  
Sbjct: 258 -YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTF-KQIVQLIEKQ 305

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (416), Expect = 4e-46
 Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 25/276 (9%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLV 589
            +G GG   ++       H  VA+K+L     + PS    F++E    + + HP +V + 
Sbjct: 14  ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73

Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                      +  +V EY+   +L D +  +    P++ +  I +  + C  L F H  
Sbjct: 74  DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ- 129

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
             + I+H D+KPANI++ A    K+ DFGI+R ++ +  S   T         GT  Y+ 
Sbjct: 130 --NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-----GTAQYLS 182

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 763
           PE      +  +SDVYS G +L  +LTG P       V  A     ++    P +     
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ--HVREDPIPPSARHEG 240

Query: 764 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 799
           + +  L  + ++    + ++R +   ++   L  + 
Sbjct: 241 L-SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  166 bits (422), Expect = 5e-46
 Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 25/258 (9%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G G +G +++   R      A K +           ++EI  +S +RHP LV L  A 
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  ++YE++  G L ++++ + N   +S    +    ++C  L  +H    ++ VH
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHE---NNYVH 147

Query: 651 GDLKPANILL--DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
            DLKP NI+     +   KL DFG++  L                   GT  +  PE   
Sbjct: 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---------QSVKVTTGTAEFAAPEVAE 198

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 767
              +   +D++S G++   LL+G     G   +           N+ D           E
Sbjct: 199 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS----E 254

Query: 768 QLANLAMRCCEMSRKSRP 785
              +   +       +R 
Sbjct: 255 DGKDFIRKLLLADPNTRM 272

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 1e-45
 Identities = 62/313 (19%), Positives = 121/313 (38%), Gaps = 29/313 (9%)

Query: 530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRH 582
           F     +G G +G++YKGL         + VAIK L    S +   E   E  +++ + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 583 PNLVTLVGACPE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
           P++  L+G C      L+ + +P G L D    +++   +  Q  +    ++   + +L 
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDY--VREHKDNIGSQYLLNWCVQIAKGMNYLE 128

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                 +VH DL   N+L+      K++DFG+++ L   E              K    +
Sbjct: 129 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE------KEYHAEGGKVPIKW 179

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           M  E +     T +SDV+S+G+ +  L+T G          +          L       
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI------SSILEKGERLP 233

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPP 820
            P +    +  + ++C  +   SRP+  +++      M           +  +ER   P 
Sbjct: 234 QPPICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMARDP--QRYLVIQGDERMHLPS 290

Query: 821 YFTCPIFQEVMQD 833
                 ++ +M +
Sbjct: 291 PTDSNFYRALMDE 303

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  164 bits (415), Expect = 5e-45
 Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 23/257 (8%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           ++G G +G +++ + +        K ++          + EI I++++ HP L+ L  A 
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
                  L+ E+L  G L DR+        +S    I    + C  L  +H    HSIVH
Sbjct: 96  EDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVH 150

Query: 651 GDLKPANILLDANFVS--KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
            D+KP NI+ +    S  K+ DFG++  L+ +EI    T          T  +  PE + 
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---------ATAEFAAPEIVD 201

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
              +   +D+++ G++   LL+G        +++   +    +   +     +  V  E 
Sbjct: 202 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV--KRCDWEFDEDAFSSVSPE- 258

Query: 769 LANLAMRCCEMSRKSRP 785
             +      +   + R 
Sbjct: 259 AKDFIKNLLQKEPRKRL 275

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 9e-45
 Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 35/305 (11%)

Query: 512 PQFFSDFSF---SEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHP 561
           P++FS        E E A      S ++G+G +G +Y+G+ + +       +VAIK ++ 
Sbjct: 1   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 60

Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNS 618
             S++   EF  E  ++ +    ++V L+G     +   ++ E +  G L+  L     +
Sbjct: 61  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 120

Query: 619 -------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
                   P S    I++A E+   + +L++   +  VH DL   N ++  +F  K+ DF
Sbjct: 121 MANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 177

Query: 672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG 731
           G++R + + +                   +M PE L  G  T  SDV+SFG++L  + T 
Sbjct: 178 GMTRDIYETDYYRKGGKGL------LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 231

Query: 732 RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
                     +       L+ +++    D P    + L  L   C + + K RP    ++
Sbjct: 232 AEQPYQGLSNEQV-----LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEI 285

Query: 792 WRVLE 796
              ++
Sbjct: 286 ISSIK 290

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 3e-44
 Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 26/258 (10%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
            +G G +G +++ +          K +           ++EI IL+  RH N++ L  + 
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
              E   +++E++    + +R+    ++  L+ +  +    ++C  L FLHS   H+I H
Sbjct: 71  ESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEALQFLHS---HNIGH 125

Query: 651 GDLKPANILLDA--NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
            D++P NI+     +   K+ +FG +R L   +                   Y  PE   
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---------NFRLLFTAPEYYAPEVHQ 176

Query: 709 SGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 767
              ++  +D++S G ++  LL+G  P L  T +              +    +       
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS----I 232

Query: 768 QLANLAMRCCEMSRKSRP 785
           +  +   R     RKSR 
Sbjct: 233 EAMDFVDRLLVKERKSRM 250

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (403), Expect = 4e-44
 Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 26/264 (9%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
           +F     +GEG + ++          + AIK+L    +   +      +E D++S++ HP
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
             V L       E       Y  NG L   +                   E+ S L +LH
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLH 125

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                 I+H DLKP NILL+ +   +++DFG ++ LS     +   +        GT  Y
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV------GTAQY 176

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 761
           + PE L        SD+++ G I+ +L+ G P      E        KL+        D+
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE-------YDF 229

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P     +  +L  +   +    R 
Sbjct: 230 PEKFFPKARDLVEKLLVLDATKRL 253

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  157 bits (397), Expect = 4e-43
 Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 28/260 (10%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGA 591
            +G G +  +     +     VAIK +   +L+G     + EI +L KI+HPN+V L   
Sbjct: 16  VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 75

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                   L+ + +  G L DR+  K      + +   R+  ++   + +LH      IV
Sbjct: 76  YESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG---IV 129

Query: 650 HGDLKPANILL---DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H DLKP N+L    D +    +SDFG+S+      +    +T C      GT  Y+ PE 
Sbjct: 130 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL---STAC------GTPGYVAPEV 180

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
           LA    +   D +S G+I   LL G P          +            P   D     
Sbjct: 181 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS--- 237

Query: 766 AEQLANLAMRCCEMSRKSRP 785
            +   +      E   + R 
Sbjct: 238 -DSAKDFIRHLMEKDPEKRF 256

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  155 bits (394), Expect = 4e-43
 Identities = 67/278 (24%), Positives = 111/278 (39%), Gaps = 40/278 (14%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---------FQQEIDIL 577
           N++P   +G G    + + + +    + A+K++        S            +E+DIL
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 578 SKIR-HPNLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
            K+  HPN++ L           LV++ +  G L D L+       LS +   +I   L 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRALL 120

Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 694
            V+  LH     +IVH DLKP NILLD +   KL+DFG S  L   E            +
Sbjct: 121 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---------KLRE 168

Query: 695 PKGTFAYMDPEFLASGEL------TPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDT 747
             GT +Y+ PE +             + D++S G+I+  LL G P      + +   +  
Sbjct: 169 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 228

Query: 748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
                   P   D+     + + +L  R   +  + R 
Sbjct: 229 SGNYQFGSPEWDDYS----DTVKDLVSRFLVVQPQKRY 262

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  152 bits (385), Expect = 1e-41
 Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           KIG G +G IY G       +VAIK+    +     +   E  I   ++    +  +  C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
               +   +V E L     +        S   S +T + +A ++ S + ++HS    + +
Sbjct: 72  GAEGDYNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFI 125

Query: 650 HGDLKPANIL---LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEF 706
           H D+KP N L        +  + DFG+++       +  +       +  GT  Y     
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR-THQHIPYRENKNLTGTARYASINT 184

Query: 707 LASGELTPKSDVYSFGIILLRLLTGRPAL--GITKEVQYALDTGKLKNLLDPLAGDWPFV 764
               E + + D+ S G +L+    G            +   +    K +  P+       
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244

Query: 765 QAEQLANLAMRCCEMSRKSRP 785
            +E  A     C  +    +P
Sbjct: 245 PSE-FATYLNFCRSLRFDDKP 264

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  148 bits (373), Expect = 3e-40
 Identities = 49/266 (18%), Positives = 92/266 (34%), Gaps = 28/266 (10%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           +IGEG +G I++G  LL + QVAIK     S     + + E      +     +  V   
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                   LV + L     +            S +T    A ++ + +  +H     S+V
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDL---LDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLV 123

Query: 650 HGDLKPANILLDANFVS-----KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDP 704
           + D+KP N L+            + DFG+ +F   + ++  +     + +  GT  YM  
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR-DPVTKQHIPYREKKNLSGTARYMSI 182

Query: 705 EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP-----LAG 759
                 E + + D+ + G + +  L G       K         ++           L  
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 242

Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRP 785
            +P    E+          ++  + P
Sbjct: 243 GFP----EEFYKYMHYARNLAFDATP 264

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 3e-40
 Identities = 62/265 (23%), Positives = 102/265 (38%), Gaps = 29/265 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSK-IRH 582
           +F     +G+G +G ++    +      AIK L    +    +      E  +LS    H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
           P L  +       E    V EYL  G L   +    +            A E+   L FL
Sbjct: 63  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQFL 119

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           HS     IV+ DLK  NILLD +   K++DFG+ +     +  +   T C      GT  
Sbjct: 120 HS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNTFC------GTPD 168

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
           Y+ PE L   +     D +SFG++L  +L G+          +  D  +L + +      
Sbjct: 169 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-------HGQDEEELFHSIRMDNPF 221

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP 785
           +P    ++  +L ++      + R 
Sbjct: 222 YPRWLEKEAKDLLVKLFVREPEKRL 246

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (374), Expect = 3e-40
 Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)

Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHP 583
            +GEG +G +                 +VA+KML   + +   S+   E++++  I +H 
Sbjct: 20  PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79

Query: 584 NLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIR 628
           N++ L+GAC +     ++ EY   G+L + L  +             +    LS +  + 
Sbjct: 80  NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 139

Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 688
            A ++   + +L S      +H DL   N+L+  + V K++DFG++R +   +     T 
Sbjct: 140 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196

Query: 689 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALD 746
                       +M PE L     T +SDV+SFG++L  + T    P  G+  E  +   
Sbjct: 197 GR------LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF--- 247

Query: 747 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 800
               K L +    D P     +L  +   C       RP   K +   L+ + A
Sbjct: 248 ----KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRIVA 296

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  148 bits (374), Expect = 4e-40
 Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 31/264 (11%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP 583
           +F     +G G +G ++    RH     A+K+L    +    +      E  +LS + HP
Sbjct: 5   DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
            ++ + G     +   ++ +Y+  G L   L      P          A E+C  L +LH
Sbjct: 65  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP---NPVAKFYAAEVCLALEYLH 121

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S     I++ DLKP NILLD N   K++DFG ++++                   GT  Y
Sbjct: 122 S---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----------TYTLCGTPDY 167

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 761
           + PE +++       D +SFGI++  +L G           Y  +T K    +      +
Sbjct: 168 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-------YDSNTMKTYEKILNAELRF 220

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
           P    E + +L  R        R 
Sbjct: 221 PPFFNEDVKDLLSRLITRDLSQRL 244

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 2e-39
 Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 16/263 (6%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGA 591
            IGEG YG +         ++VAIK + P   Q       +EI IL + RH N++ +   
Sbjct: 15  YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 74

Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
              P +  +   YL    +   L     +  LS         ++   L ++HS    +++
Sbjct: 75  IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVL 131

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS 709
           H DLKP+N+LL+     K+ DFG++R         ++      T+   T  Y  PE + +
Sbjct: 132 HRDLKPSNLLLNTTCDLKICDFGLARV-----ADPDHDHTGFLTEYVATRWYRAPEIMLN 186

Query: 710 GEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 768
            +  T   D++S G IL  +L+ RP       +        L  L  P   D   +   +
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLNHILGILGSPSQEDLNCIINLK 244

Query: 769 LANLAMRCCEMSRKSRPELGKDV 791
             N  +     ++     L  + 
Sbjct: 245 ARNYLLSLPHKNKVPWNRLFPNA 267

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 2e-39
 Identities = 60/289 (20%), Positives = 107/289 (37%), Gaps = 39/289 (13%)

Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQGP-SEFQQEIDILSKIRH-PNL 585
            +G G +G + +     +        VA+KML   +          E+ IL  I H  N+
Sbjct: 20  PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 79

Query: 586 VTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSP-------------PLSWQTRIRI 629
           V L+GAC +      ++ E+   G+L   L  K N                L+ +  I  
Sbjct: 80  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 139

Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 689
           + ++   + FL S      +H DL   NILL    V K+ DFG++R + ++         
Sbjct: 140 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 196

Query: 690 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 749
                      +M PE +     T +SDV+SFG++L  + +   +     ++        
Sbjct: 197 R------LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 246

Query: 750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
            + L +      P     ++    + C       RP    ++   L  +
Sbjct: 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNL 294

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 3e-38
 Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 33/264 (12%)

Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
           +G G  G + +   +    + A+KML         + ++E+++  +  + P++V +V   
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVY 74

Query: 593 PEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
             ++       +V E L  G L  R+         + +    I   +   + +LHS    
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---I 130

Query: 647 SIVHGDLKPANILLDA---NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
           +I H D+KP N+L  +   N + KL+DFG ++  + +            T P  T  Y+ 
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---------SLTTPCYTPYYVA 181

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPAL--GITKEVQYALDTGKLKNLLDPLAGDW 761
           PE L   +     D++S G+I+  LL G P         +   + T       +    +W
Sbjct: 182 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 241

Query: 762 PFVQAEQLANLAMRCCEMSRKSRP 785
             V +E++  L     +     R 
Sbjct: 242 SEV-SEEVKMLIRNLLKTEPTQRM 264

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 4e-38
 Identities = 60/266 (22%), Positives = 104/266 (39%), Gaps = 34/266 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGP------SEFQQEIDILSKIRHPNLV 586
           ++G G +  + K   +   +Q A K +     +         + ++E+ IL +I+HPN++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76

Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
           TL           L+ E +  G L D          L+ +       ++ + + +LHS  
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFD---FLAEKESLTEEEATEFLKQILNGVYYLHS-- 131

Query: 645 PHSIVHGDLKPANILLDANFVS----KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
              I H DLKP NI+L    V     K+ DFG++  +                +  GT  
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---------EFKNIFGTPE 181

Query: 701 YMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAG 759
           ++ PE +    L  ++D++S G+I   LL+G  P LG TK+   A  +       D    
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241

Query: 760 DWPFVQAEQLANLAMRCCEMSRKSRP 785
           +          +   R      K R 
Sbjct: 242 NTS----ALAKDFIRRLLVKDPKKRM 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  144 bits (363), Expect = 5e-38
 Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 33/269 (12%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQE---IDILSKI 580
           +F     IG GG+G +Y           A+K L    +   QG +    E   + ++S  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 581 RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
             P +V +  A   P+  + + + +  G L   LS        S       A E+   L 
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLE 121

Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGT 698
            +H+     +V+ DLKPANILLD +   ++SD G++   S+ +               GT
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----------PHASVGT 168

Query: 699 FAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDP 756
             YM PE L  G      +D +S G +L +LL G  P      + ++ +D   L   +  
Sbjct: 169 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-- 226

Query: 757 LAGDWPFVQAEQLANLAMRCCEMSRKSRP 785
              + P   + +L +L     +     R 
Sbjct: 227 ---ELPDSFSPELRSLLEGLLQRDVNRRL 252

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 4e-37
 Identities = 57/239 (23%), Positives = 91/239 (38%), Gaps = 36/239 (15%)

Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
           ++    P    + S+++ +           IG G +G +Y+  L      VAIK +    
Sbjct: 8   ATPGQGPDRPQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKV---- 53

Query: 564 LQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCK 615
           LQ      +E+ I+ K+ H N+V L                 LV +Y+P           
Sbjct: 54  LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

Query: 616 DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGIS 674
                L          +L   L ++HS     I H D+KP N+LLD +  V KL DFG +
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170

Query: 675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
           + L + E           +     +         + + T   DV+S G +L  LL G+P
Sbjct: 171 KQLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 7e-37
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 29/274 (10%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG 590
           KIG+G +G ++K   R    +VA+K +   + +   P    +EI IL  ++H N+V L+ 
Sbjct: 17  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 76

Query: 591 ACPEVWT----------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
            C    +          LV+++  +          +     +     R+   L + L ++
Sbjct: 77  ICRTKASPYNRCKGSIYLVFDFCEHDLAGL---LSNVLVKFTLSEIKRVMQMLLNGLYYI 133

Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 700
           H  K   I+H D+K AN+L+  + V KL+DFG++R  S  +    N+     T+   T  
Sbjct: 134 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK----NSQPNRYTNRVVTLW 186

Query: 701 YMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLA 758
           Y  PE L    +  P  D++  G I+  + T  P + G T++ Q AL     +       
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI---SQLCGSITP 243

Query: 759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 792
             WP V   +L           RK +  L   V 
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR 277

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 2e-36
 Identities = 71/289 (24%), Positives = 111/289 (38%), Gaps = 33/289 (11%)

Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI 580
           A   ++   +IGEG YG ++K          VA+K +   + +   P    +E+ +L  +
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 581 ---RHPNLVTLVGACPEVWT-------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
               HPN+V L   C    T       LV+E++           K   P +  +T   + 
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDMM 122

Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 690
            +L   L FLHS   H +VH DLKP NIL+ ++   KL+DFG++R  S            
Sbjct: 123 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---------M 170

Query: 691 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGK 749
             T    T  Y  PE L         D++S G I   +   +P   G +   Q       
Sbjct: 171 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK---I 227

Query: 750 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 798
           L  +  P   DWP   A        +  +   K   ++ +    +L   
Sbjct: 228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC 276

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-35
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 42/265 (15%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE------FQQEIDILSKIR--HPN 584
            +G GG+GS+Y G+    ++ VAIK +    +    E         E+ +L K+      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           ++ L+     P+ + L+ E             +     L  +       ++   +   H+
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 128

Query: 643 CKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
                ++H D+K  NIL+D N    KL DFG    L               TD  GT  Y
Sbjct: 129 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------VYTDFDGTRVY 175

Query: 702 MDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 760
             PE++         + V+S GI+L  ++ G       +E+      G++          
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQV---------F 222

Query: 761 WPFVQAEQLANLAMRCCEMSRKSRP 785
           +    + +  +L   C  +    RP
Sbjct: 223 FRQRVSSECQHLIRWCLALRPSDRP 247

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 3e-35
 Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 24/209 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE-----FQQEIDILSKIRHPNLVT 587
            +GEG + ++YK   ++    VAIK +         +       +EI +L ++ HPN++ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
           L+ A       +LV++++           KDNS  L+              L +LH    
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEVI---IKDNSLVLTPSHIKAYMLMTLQGLEYLHQ--- 118

Query: 646 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPE 705
           H I+H DLKP N+LLD N V KL+DFG+++                 T    T  Y  PE
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--------RAYTHQVVTRWYRAPE 170

Query: 706 FLASGEL-TPKSDVYSFGIILLRLLTGRP 733
            L    +     D+++ G IL  LL   P
Sbjct: 171 LLFGARMYGVGVDMWAVGCILAELLLRVP 199

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 1e-34
 Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 28/269 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP 583
           +FD    +G+G +G +     +      A+K+L    +    E      E  +L   RHP
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
            L  L  A    +    V EY   G L   LS        + +       E+ S L +LH
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLH 122

Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAY 701
           S     +V+ D+K  N++LD +   K++DFG+ +     E  S+  T+       GT  Y
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFC---GTPEY 171

Query: 702 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 761
           + PE L   +     D +  G+++  ++ GR          Y  D  +L  L+      +
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-------YNQDHERLFELILMEEIRF 224

Query: 762 PFVQAEQLANLAMRCCEMSRKSRPELGKD 790
           P   + +  +L     +   K R   G  
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPS 253

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  129 bits (325), Expect = 8e-34
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 24/238 (10%)

Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGA 591
           KIGEG YG +YK    + +  A+K +         PS   +EI IL +++H N+V L   
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68

Query: 592 CPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
                   LV+E+L     +    C+     L   T      +L + + + H      ++
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHD---RRVL 122

Query: 650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA- 708
           H DLKP N+L++     K++DFG++R          +  +           Y  P+ L  
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT--------LWYRAPDVLMG 174

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQ 765
           S + +   D++S G I   ++ G P   G+++  Q        + L  P + +WP V 
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR---IFRILGTPNSKNWPNVT 229

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 9e-34
 Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 20/212 (9%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPN 584
           NF    KIGEG YG +YK   +     VA+K +   +     PS   +EI +L ++ HPN
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
           +V L+          LV+E+L       +         +          +L   L F HS
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLK--KFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
              H ++H DLKP N+L++     KL+DFG++R           T             Y 
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTL------WYR 169

Query: 703 DPEFLA-SGELTPKSDVYSFGIILLRLLTGRP 733
            PE L      +   D++S G I   ++T R 
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  129 bits (325), Expect = 3e-33
 Identities = 55/315 (17%), Positives = 111/315 (35%), Gaps = 47/315 (14%)

Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
           KK  ++  ++   A  + + L+K    + +++ + QF       +             +G
Sbjct: 7   KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQF-------DRIK---------TLG 50

Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGAC 592
            G +G +     +      A+K+L    +    +      E  IL  +  P LV L  + 
Sbjct: 51  TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110

Query: 593 PEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
            +   L  V EY+  G +   L         S       A ++     +LHS     +++
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIY 164

Query: 651 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 710
            DLKP N+L+D     +++DFG ++                     GT   + PE + S 
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR-----------VKGRTWTLCGTPEALAPEIILSK 213

Query: 711 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 770
                 D ++ G+++  +  G P         +A    ++   +      +P   +  L 
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-------FADQPIQIYEKIVSGKVRFPSHFSSDLK 266

Query: 771 NLAMRCCEMSRKSRP 785
           +L     ++    R 
Sbjct: 267 DLLRNLLQVDLTKRF 281

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 9e-32
 Identities = 53/270 (19%), Positives = 102/270 (37%), Gaps = 34/270 (12%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
            +G G YG++   +      +VAIK L+             +E+ +L  +RH N++ L+ 
Sbjct: 25  PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84

Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                 T        LV  ++  G+   +L        L       +  ++   L ++H+
Sbjct: 85  VFTPDETLDDFTDFYLVMPFM--GTDLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIHA 139

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                  H DLKP N+ ++ +   K+ DFG++R                 T    T  Y 
Sbjct: 140 AGII---HRDLKPGNLAVNEDCELKILDFGLARQADSE-----------MTGYVVTRWYR 185

Query: 703 DPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 761
            PE + +    T   D++S G I+  ++TG+     +  +        +K    P A   
Sbjct: 186 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD--QLKEIMKVTGTPPAEFV 243

Query: 762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 791
             +Q+++  N      E+ +K    +  + 
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNA 273

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  123 bits (308), Expect = 3e-31
 Identities = 50/246 (20%), Positives = 105/246 (42%), Gaps = 31/246 (12%)

Query: 500 KSRKEASSSSHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAI 556
           ++R     ++H P+ + D+    +E G   ++    K+G G Y  +++ +    + +V +
Sbjct: 6   RARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 65

Query: 557 KMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE----VWTLVYEYLPNGSLEDR 611
           K+L P   +   + ++EI IL  +R  PN++TL     +       LV+E++ N   +  
Sbjct: 66  KILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 122

Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSD 670
                    L+         E+   L + HS     I+H D+KP N+++D  +   +L D
Sbjct: 123 YQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLID 173

Query: 671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLL 729
           +G++ F    +                +  +  PE L   ++     D++S G +L  ++
Sbjct: 174 WGLAEFYHPGQE---------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224

Query: 730 TGRPAL 735
             +   
Sbjct: 225 FRKEPF 230

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 1e-30
 Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 20/236 (8%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
           KIGEG YG+++K   R  H  VA+K +         PS   +EI +L +++H N+V L  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68

Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
                   TLV+E+      +   SC  +      +       +L   L F H     ++
Sbjct: 69  VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD---PEIVKSFLFQLLKGLGFCH---SRNV 122

Query: 649 VHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 708
           +H DLKP N+L++ N   KL++FG++R            +    T     +         
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGI---PVRCYSAEVVT----LWYRPPDVLFG 175

Query: 709 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 764
           +   +   D++S G I   L      L    +V   L     + L  P    WP +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR-IFRLLGTPTEEQWPSM 230

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 6e-29
 Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 30/276 (10%)

Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSL----QGPSEFQQEIDILSK 579
           NF+    +G G YG ++              A+K+L   ++    +     + E  +L  
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 580 IRH-PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
           IR  P LVTL  A        L+ +Y+  G L   LS ++       Q  +        +
Sbjct: 85  IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG------EI 138

Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
           ++ L       I++ D+K  NILLD+N    L+DFG+S+    +E            D  
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-------RAYDFC 191

Query: 697 GTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 754
           GT  YM P+ +  G+       D +S G+++  LLTG     +  E     +  +     
Sbjct: 192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 251

Query: 755 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 790
           +P    +P   +    +L  R      K R   G  
Sbjct: 252 EP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 284

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 3e-28
 Identities = 54/269 (20%), Positives = 101/269 (37%), Gaps = 32/269 (11%)

Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVG 590
            +G G YGS+         ++VA+K L     S+       +E+ +L  ++H N++ L+ 
Sbjct: 25  PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84

Query: 591 ACPEVWTL-------VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
                 +L       +  +L    L + + C+     L+      +  ++   L ++HS 
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHS- 139

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD 703
               I+H DLKP+N+ ++ +   K+ DFG++R                       +    
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----------EMTGYVATRWYRAP 187

Query: 704 PEFLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWP 762
              L         D++S G I+  LLTGR    G     Q  L    L+ +  P A    
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL---ILRLVGTPGAELLK 244

Query: 763 FVQAEQLANLAMRCCEMSRKSRPELGKDV 791
            + +E   N      +M + +   +    
Sbjct: 245 KISSESARNYIQSLTQMPKMNFANVFIGA 273

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 6e-27
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 30/211 (14%)

Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
            IG G  G +           VAIK L              +E+ ++  + H N+++L+ 
Sbjct: 24  PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83

Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
                 T        LV E +     +      D       +    +  ++   +  LHS
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD------HERMSYLLYQMLCGIKHLHS 137

Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYM 702
                 +H DLKP+NI++ ++   K+ DFG++R    +            T    T  Y 
Sbjct: 138 AGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---------MMTPYVVTRYYR 185

Query: 703 DPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            PE +         D++S G I+  ++  + 
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKI 216

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  106 bits (264), Expect = 3e-25
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 27/217 (12%)

Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
           K+G G + +++    ++ +  VA+K++    +      + EI +L ++   +        
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 593 ---------------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
                          P    +V  +   G     L  K     +      +I+ +L   L
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPK 696
            ++   +   I+H D+KP N+L++       L    I+   +      + T         
Sbjct: 139 DYM--HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI------ 190

Query: 697 GTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 733
            T  Y  PE L        +D++S   ++  L+TG  
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 227

>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: E3 ubiquitin ligase PUB14
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.4 bits (208), Expect = 1e-20
 Identities = 31/72 (43%), Positives = 44/72 (61%)

Query: 817 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 876
           E P YF CPI  E+M+DP + + G TYE  +++ WLD+GH+T P +   L H  L PN  
Sbjct: 4   EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63

Query: 877 LRSAIQEWLQQH 888
           L+S I  W + +
Sbjct: 64  LKSLIALWCESN 75

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 80.6 bits (198), Expect = 6e-18
 Identities = 24/158 (15%), Positives = 46/158 (29%), Gaps = 19/158 (12%)

Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL----------QGPSEFQQEIDILSKIRHP 583
            +GEG   +++        +  +K                  G   F       ++    
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66

Query: 584 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
            L  L G         Y +  N  L + L        +  +    +   +   +   +  
Sbjct: 67  ALQKLQGLAVPKV---YAWEGNAVLME-LIDAKELYRVRVENPDEVLDMILEEVAKFYH- 121

Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 681
               IVHGDL   N+L+    +  + DF  S  + +  
Sbjct: 122 --RGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEVGEEG 156

>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 80

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.2 bits (163), Expect = 2e-14
 Identities = 20/72 (27%), Positives = 39/72 (54%)

Query: 817 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 876
           + P Y    I  E+M++P +   G TY+ + ++  L      +P+T  PL  + L+PNLA
Sbjct: 3   DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLA 62

Query: 877 LRSAIQEWLQQH 888
           ++  I  ++ ++
Sbjct: 63  MKEVIDAFISEN 74

>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: Ubiquitin conjugation factor E4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 1e-11
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 800 ASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGF-TYEAEALKGWLDSGHET 858
            S G S   +   E   +    F  PI   +M DP V      T +   +   L S  +T
Sbjct: 1   GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQT 59

Query: 859 SPMTNLPLAHKNLVPNLALRSAIQEWLQQH 888
            P    PL    + PN  L+  IQ WL + 
Sbjct: 60  DPFNRSPLTMDQIRPNTELKEKIQRWLAER 89

>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: brca1 RING domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 822 FTCPIFQEVMQDPHVAADGFTYEAEALKGWLDS--GHETSPMTNLPLAHKNLVPNLALRS 879
             CPI  E++++P        +    +   L+   G    P+    +  ++L  +     
Sbjct: 22  LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQ 81

Query: 880 AIQEWLQ 886
            ++E L+
Sbjct: 82  LVEELLK 88

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 22/141 (15%), Positives = 62/141 (43%)

Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
             L +   E      +A E      K+++   ++I +   + +   +E++  +   E+  
Sbjct: 158 QDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQ 217

Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
                L  M+++++++ME+ + +  +     ++  E+D+     EQ+   A++L +  + 
Sbjct: 218 ASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQL 277

Query: 480 EQDELQMERDKAVKEAEELRK 500
            ++  Q E      E ++L+ 
Sbjct: 278 LKEGFQKESRIMKNEIQDLQT 298

>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]} Length = 166

class: All alpha proteins
fold: Apolipophorin-III
superfamily: Apolipophorin-III
family: Apolipophorin-III
domain: Apolipophorin-III
species: Manduca sexta [TaxId: 7130]

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 31/173 (17%)

Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
           G+  + +     +            F E        K+  +  +  K       ++L   
Sbjct: 6   GNAFEEMEKHAKEFQKT--------FSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAF 57

Query: 412 ------------KEFEEAL--ANGKLEL--ERMKKQHDEVMEEL-QIALDQKSLLESQIA 454
                        + +EAL  A   +E   E ++K H +V +E        ++ +++ + 
Sbjct: 58  SSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQ 117

Query: 455 ESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
           ES + AKE+   +    + L    K+        D  VK AEE++K   EA++
Sbjct: 118 ESQKLAKEVASNMEETNKKLAPKIKQA------YDDFVKHAEEVQKKLHEAAT 164

>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: Pre-mRNA splicing factor Prp19
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 823 TCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVP 873
            C I  +V + P ++      +E   L+ ++       P+TN PL+ + +V 
Sbjct: 2   LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVE 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	888
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d2gm3a1	171	Putative ethylene-responsive protein AT3g01520/F4P	99.87
d1mjha_	160	"Hypothetical" protein MJ0577 {Archaeon Methanococ	99.81
d2z3va1	135	Hypothetical protein TTHA0895 {Thermus thermophilu	99.7
d1tq8a_	147	Hypothetical protein Rv1636 {Mycobacterium tubercu	99.67
d1q77a_	138	Hypothetical protein Aq_178 {Aquifex aeolicus [Tax	99.62
d1wgma_	98	Ubiquitin conjugation factor E4A {Human (Homo sapi	99.6
d1jmva_	140	Universal stress protein A, UspA {Haemophilus infl	99.59
d2c2la2	80	STIP1 homology and U box-containing protein 1, STU	99.48
d1t1ha_	78	E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsi	99.46
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.86
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.25
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.23
d2baya1	56	Pre-mRNA splicing factor Prp19 {Baker's yeast (Sac	98.14
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.96
d1jm7b_	97	bard1 RING domain {Human (Homo sapiens) [TaxId: 96	97.7
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.63
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.46
d1jm7a_	103	brca1 RING domain {Human (Homo sapiens) [TaxId: 96	97.17
d1rmda2	86	V(D)J recombination activating protein 1 (RAG1), d	96.98
d1fbva4	79	CBL {Human (Homo sapiens) [TaxId: 9606]}	95.88
d1wy5a1	216	TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId	86.49
d1bora_	56	Acute promyelocytic leukaemia proto-oncoprotein PM	81.45

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=382.44  Aligned_cols=264  Identities=27%  Similarity=0.412  Sum_probs=210.9

Q ss_pred             HHHCCCCCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCC--CCHHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEEE
Q ss_conf             21028977541141008668999998790899999358999--99037999999998259997001305347-7128999
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY  600 (888)
Q Consensus       524 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV~  600 (888)
                      +...++|.+.+.||+|+||+||+|.+.+ .||||+++....  .....|.+|+.+|.+++|||||+++|++. +..++||
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~   82 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVT   82 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             CCCCCCEEEEEEEEECCCCEEEEEEECC-EEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEE
T ss_conf             3154518998898307885899999999-899999973469989999999999999847998786456797155899999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...  ...+++..+..|+.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        83 Ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~  157 (276)
T d1uwha_          83 QWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW  157 (276)
T ss_dssp             ECCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred             ECCCCCCHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCHHHEEECCCCCEEECCCCCEEECCCC
T ss_conf             658998889998523--5789999999999999999888750---99951614789979818997887500221333556


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCC---CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             446788641113799998666781111149---99960468889999999990999999855899998410000125877
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~---~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      .....      .+...||+.|+|||++.+.   .|+.++|||||||+||||+||+.||............. ......+.
T Consensus       158 ~~~~~------~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~-~~~~~~p~  230 (276)
T d1uwha_         158 SGSHQ------FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV-GRGYLSPD  230 (276)
T ss_dssp             --------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH-HHTSCCCC
T ss_pred             CCCCC------CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HCCCCCCC
T ss_conf             77631------256655743179999950568999953151635999999997889989989699999999-65888986


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             89999356999999999985009799999699999973000003
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~~  801 (888)
                      ....+...+..+.+|+.+||+.+|.+||++ .++++.|+.+...
T Consensus       231 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~-~~il~~Le~l~~~  273 (276)
T d1uwha_         231 LSKVRSNCPKAMKRLMAECLKKKRDERPLF-PQILASIELLARS  273 (276)
T ss_dssp             GGGSCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred             CHHCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHHC
T ss_conf             000365554999999999758897689299-9999999999970

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=0  Score=375.79  Aligned_cols=258  Identities=25%  Similarity=0.413  Sum_probs=207.9

Q ss_pred             CCCCCCCEEEECCCEEEEEEEECC-----EEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEE
Q ss_conf             897754114100866899999879-----08999993589999-9037999999998259997001305347--712899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV  599 (888)
                      ++|.+.+.||+|+||+||+|.+..     ..||||.+...... ..+.|.+|+.+|++++|||||+++|+|.  +..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             HHCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf             04278569802788299999995799788999999978445989999999999999857998886189999628877999


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCC
Q ss_conf             97348999444310269999999888999999999999998523999602033157908984799200004432102454
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|.+++..  ....+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       106 ~Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             EECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEECCCCCCEEEECC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCCCCEECCC
T ss_conf             972279853002104--56799999999999999998898852---7983576150448988999199888443157567


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             444678864111379999866678111114999960468889999999990-9999998558999984100001258778
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .......   .......||+.|+|||++.++.++.++|||||||+||||+| |++||.............      ....
T Consensus       181 ~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~------~~~~  251 (299)
T d1jpaa_         181 DTSDPTY---TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE------QDYR  251 (299)
T ss_dssp             ------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH------TTCC
T ss_pred             CCCCCEE---EECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH------CCCC
T ss_conf             7776536---502566688300387888369978612144535789999867999999999999999997------3788


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             999935699999999998500979999969999997300000
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      ...|...+..+.+|+.+||+.+|.+||++ .++++.|+.+..
T Consensus       252 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~-~ei~~~L~~~l~  292 (299)
T d1jpaa_         252 LPPPMDCPSALHQLMLDCWQKDRNHRPKF-GQIVNTLDKMIR  292 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHC
T ss_conf             99974226999999999758797689299-999999999841

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=370.28  Aligned_cols=244  Identities=25%  Similarity=0.388  Sum_probs=204.3

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEEC
Q ss_conf             89775411410086689999987--908999993589999903799999999825999700130534--77128999734
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey~  603 (888)
                      .+|...++||+|+||+||+|...  +..||||++........+.+.+|+.+|+.++|||||++++++  .+..|+||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEC
T ss_conf             05388789812858299999998999899999984301727999999999998679998805857798899989999703


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      +||+|.+++..    ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|+.+......
T Consensus       100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCC
T ss_conf             79808988641----599999999999999999999998---79722677688868878996864251564132136664


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf             78864111379999866678111114999960468889999999990999999855899998410000125877899993
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF  763 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~  763 (888)
                              .....||+.|+|||++.+..|+.++|||||||++|+|+||++||.................    .....|.
T Consensus       173 --------~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~----~~~~~~~  240 (293)
T d1yhwa1         173 --------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPE  240 (293)
T ss_dssp             --------BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS----CCCSSGG
T ss_pred             --------CCCCCCCCCCCCHHHHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC----CCCCCCC
T ss_conf             --------4444447773682664479988012031372999998048899899799999999985799----9888855


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             5699999999998500979999969999
Q 002719          764 VQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       764 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      ..+..+.+|+.+||+.+|.+||++ .++
T Consensus       241 ~~s~~~~~li~~~L~~dP~~R~s~-~ei  267 (293)
T d1yhwa1         241 KLSAIFRDFLNRCLDMDVEKRGSA-KEL  267 (293)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCCH-HHH
T ss_pred             CCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             379999999999866996689099-999

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=372.93  Aligned_cols=258  Identities=28%  Similarity=0.451  Sum_probs=210.1

Q ss_pred             HHHCCCCCCCCEEEECCCEEEEEEEECC-EEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEEEE
Q ss_conf             2102897754114100866899999879-089999935899999037999999998259997001305347-71289997
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE  601 (888)
Q Consensus       524 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV~E  601 (888)
                      +...++|.+.+.||+|+||.||+|.+++ ..||||++.... ...+.|.+|+.+|++++|||||+++|+|. +..++|||
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~E   87 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITE   87 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             ECCHHHEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEE
T ss_conf             03889938867981079828999999999999999986476-88899999999998679998857873104597699999


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             34899944431026999999988899999999999999852399960203315790898479920000443210245444
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|.+++.... ..++++..++.|+.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+|+.+....
T Consensus        88 y~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          88 YMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             CCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             ECCCCCHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEEECCCCEEECCCCCEEECCCCC
T ss_conf             578982888875147-8988788999999999999999974---895467564225156202440423410147735886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             4678864111379999866678111114999960468889999999990-999999855899998410000125877899
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...       .....||+.|+|||++.++.++.++|||||||++|||+| |.+||.............      ......
T Consensus       164 ~~~-------~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~------~~~~~~  230 (272)
T d1qpca_         164 YTA-------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------RGYRMV  230 (272)
T ss_dssp             EEC-------CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH------TTCCCC
T ss_pred             CCC-------CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH------HCCCCC
T ss_conf             442-------0356774444582898379998245645257999999968988888889999999997------068888


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             9935699999999998500979999969999997300000
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      .|...+..+.+|+.+||+.+|.+||++ +++++.|+++-.
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~-~ei~~~L~~~ft  269 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLEDFFT  269 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHH
T ss_conf             965571999999999758897689399-999998611321

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=369.57  Aligned_cols=254  Identities=25%  Similarity=0.465  Sum_probs=209.8

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC-CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEEC
Q ss_conf             289775411410086689999987-908999993589999903799999999825999700130534--77128999734
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey~  603 (888)
                      .++|.+.+.||+|+||.||+|.+. +..||||++.... ...+.|.+|+.++++++|||||+++|+|  .+..++||||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEEC
T ss_conf             69958888982088829999998899999999987886-76899999999999668997565352431599337999836


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++..  ....+++..++.|+.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus        83 ~~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  157 (263)
T d1sm2a_          83 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  157 (263)
T ss_dssp             TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             CCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCCCE
T ss_conf             99918997520--13478899999999999998776531---64310443153266668877686553210023688733


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             78864111379999866678111114999960468889999999990-99999985589999841000012587789999
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .       .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||..............      ......|
T Consensus       158 ~-------~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~------~~~~~~p  224 (263)
T d1sm2a_         158 S-------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYKP  224 (263)
T ss_dssp             --------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH------TCCCCCC
T ss_pred             E-------ECCEECCCCCCCHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH------CCCCCCC
T ss_conf             5-------04300176667857860799984033210599999998789888778999999999980------6888995


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             35699999999998500979999969999997300000
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      ...+..+.+|+.+||+.+|.+||++ +++++.|+.+..
T Consensus       225 ~~~~~~l~~li~~cl~~~p~~Rps~-~~il~~L~~i~e  261 (263)
T d1sm2a_         225 RLASTHVYQIMNHCWKERPEDRPAF-SRLLRQLAEIAE  261 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHH
T ss_conf             4367999999999765797689199-999999999985

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=369.53  Aligned_cols=257  Identities=26%  Similarity=0.411  Sum_probs=206.7

Q ss_pred             HHCCCCCCCCEEEECCCEEEEEEEECC-------EEEEEEEECCCC-CCCHHHHHHHHHHHHHC-CCCCEEEEECCCC--
Q ss_conf             102897754114100866899999879-------089999935899-99903799999999825-9997001305347--
Q 002719          525 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--  593 (888)
Q Consensus       525 ~~~~~y~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~L-~HpnIv~l~g~~~--  593 (888)
                      ...++|.+.++||+|+||+||+|.+.+       ..||+|.+.... ......+.+|+.+|.++ +|||||+++|+|.  
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~  113 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  113 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf             77899397019830788199999985788554204999999663358789999999999999715899686877888629


Q ss_pred             CCEEEEEEECCCCCHHHHHHCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf             712899973489994443102699--------------------999998889999999999999985239996020331
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDN--------------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL  653 (888)
Q Consensus       594 ~~~~lV~Ey~~~gsL~~~L~~~~~--------------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDL  653 (888)
                      +..++||||+++|+|.+++.....                    ...+++..++.|+.|++.||.|||+   ++|+||||
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDl  190 (325)
T d1rjba_         114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL  190 (325)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCC
T ss_conf             958999972799959999986257775102210000122200125778999999999999999999973---99050527


Q ss_pred             CCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CC
Q ss_conf             57908984799200004432102454444678864111379999866678111114999960468889999999990-99
Q 002719          654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GR  732 (888)
Q Consensus       654 Kp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~  732 (888)
                      ||+|||++.++.+||+|||+|+..........      .+...||+.|+|||++.++.|+.++|||||||+||||+| |+
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~------~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~  264 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVV------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV  264 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEE------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             CHHCCCCCCCCEEEEEECCCCCCCCCCCCEEE------ECCCCCCCCCCCHHHHCCCCCCCCEECCCHHHHHHHHHHCCC
T ss_conf             03214434598289851422220457786156------234357876578388727999963303000399999983899


Q ss_pred             CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf             9999855899998410000125877899993569999999999850097999996999999730
Q 002719          733 PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE  796 (888)
Q Consensus       733 ~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~  796 (888)
                      +||.............  .   .....+.|...+..+.+|+.+||+.+|.+||++ ++|++.|.
T Consensus       265 ~Pf~~~~~~~~~~~~~--~---~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~-~ei~~~L~  322 (325)
T d1rjba_         265 NPYPGIPVDANFYKLI--Q---NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-PNLTSFLG  322 (325)
T ss_dssp             CSSTTCCCSHHHHHHH--H---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHH--H---CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHH
T ss_conf             9999989899999998--5---699899887678999999999758896689399-99999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=369.36  Aligned_cols=246  Identities=25%  Similarity=0.375  Sum_probs=201.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEEC
Q ss_conf             89775411410086689999987--908999993589999903799999999825999700130534--77128999734
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey~  603 (888)
                      +.|++...||+|+||.||+|.+.  +..||+|++........+.+.+|+.+|+.++|||||++++++  .+..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEECC
T ss_conf             37598479930778199999999999399999987289999999999999998679999884988980099589999627


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++...  ..++++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus        92 ~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~  166 (288)
T d2jfla1          92 AGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR  166 (288)
T ss_dssp             TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH
T ss_pred             CCCCHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCCCCC
T ss_conf             998188999862--8999999999999999999999998---89887140700314878999899716123035778641


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHC-----CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             7886411137999986667811111-----49999604688899999999909999998558999984100001258778
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                              .....||+.|+|||++.     ...|+.++|||||||+||+|+||++||................    +..
T Consensus       167 --------~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~----~~~  234 (288)
T d2jfla1         167 --------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE----PPT  234 (288)
T ss_dssp             --------HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC----CCC
T ss_pred             --------CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC----CCC
T ss_conf             --------00102562647999983202578888806657878999999820889999989999999997079----987


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             999935699999999998500979999969999
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      ...|...+..+.+|+.+||+.+|.+||++ .++
T Consensus       235 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~-~el  266 (288)
T d2jfla1         235 LAQPSRWSSNFKDFLKKCLEKNVDARWTT-SQL  266 (288)
T ss_dssp             CSSGGGSCHHHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             77656699999999999766996689199-999

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=0  Score=370.69  Aligned_cols=258  Identities=26%  Similarity=0.454  Sum_probs=208.6

Q ss_pred             HHHHCCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEE
Q ss_conf             6210289775411410086689999987--9089999935899999037999999998259997001305347--71289
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL  598 (888)
Q Consensus       523 i~~~~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~l  598 (888)
                      ++...++|.+.++||+|+||+||+|.+.  +..||||++.... ...+.|.+|+.+|+.++|||||+++|+|.  +..++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             CEECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCC-CHHHHHHHHHHHHHHCCCCCEECCCCCEEECCEEEE
T ss_conf             1745799398659820888089999999999699999977761-039999999999986799988267752745785478


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCC
Q ss_conf             99734899944431026999999988899999999999999852399960203315790898479920000443210245
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++|+|.+++.... ...+++..+..|+.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+...
T Consensus        91 v~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred             EEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCCCEEECC
T ss_conf             763146760677753035-5415799999999999997888987---893057604576899899928983244546537


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             44446788641113799998666781111149999604688899999999909999-99855899998410000125877
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA-LGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~P-f~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      ......       .+...|++.|+|||++.++.|+.++|||||||++|||++|..| |...+.... ....     ....
T Consensus       167 ~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~-~~~i-----~~~~  233 (287)
T d1opja_         167 GDTYTA-------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELL-----EKDY  233 (287)
T ss_dssp             SSSSEE-------ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHHH-----HTTC
T ss_pred             CCCCEE-------ECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHH-----HCCC
T ss_conf             887221-------03556654666927872799981043021789999998679988774259999-9998-----5588


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             899993569999999999850097999996999999730000
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      ....|...+..+.+|+.+||+.+|.+||++ .++.+.|+.+.
T Consensus       234 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~ei~~~L~~~~  274 (287)
T d1opja_         234 RMERPEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETMF  274 (287)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             888874330999999999757797689399-99999999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=369.78  Aligned_cols=254  Identities=24%  Similarity=0.397  Sum_probs=204.8

Q ss_pred             CCCCCCC-EEEECCCEEEEEEEEC----CEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEEE
Q ss_conf             8977541-1410086689999987----908999993589999-9037999999998259997001305347-7128999
Q 002719          528 HNFDPSL-KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY  600 (888)
Q Consensus       528 ~~y~~~~-~LG~G~fG~Vy~g~~~----~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV~  600 (888)
                      ++|.+.. +||+|+||.||+|.+.    +..||||++...... ..+.|.+|+.+|++++|||||+++|+|. +..++||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvm   87 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   87 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             CCEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEE
T ss_conf             47188784873060809999999608976899999988203978999999999999867998880686560368079999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++.  .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus        88 E~~~~g~L~~~l~--~~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          88 EMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             ECCTTEEHHHHHT--TCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EECCCCCHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEECCCCCEEECCCHHHHCCCCC
T ss_conf             8078996899752--125699999999999999998789986---88105767646604546885420331342115543


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990-99999985589999841000012587789
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....     .......||+.|+|||++.++.++.++|||||||++|||+| |++||......+.....      ......
T Consensus       163 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i------~~~~~~  231 (285)
T d1u59a_         163 DSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI------EQGKRM  231 (285)
T ss_dssp             SCEE-----CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH------HTTCCC
T ss_pred             CCCC-----CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHH------HCCCCC
T ss_conf             4321-----13562113743358688727999954123220178999993899999997999999999------818999


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
Q ss_conf             999356999999999985009799999699999973000
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l  798 (888)
                      ..|...+..+.+|+.+||+.+|.+||++ .++.+.|+..
T Consensus       232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~-~~i~~~L~~~  269 (285)
T d1u59a_         232 ECPPECPPELYALMSDCWIYKWEDRPDF-LTVEQRMRAC  269 (285)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHH
T ss_conf             9997678999999999757797689099-9999999999

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=369.03  Aligned_cols=247  Identities=26%  Similarity=0.360  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCC-CCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEEE
Q ss_conf             89775411410086689999987--90899999358999-99037999999998259997001305347--712899973
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY  602 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~-~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~Ey  602 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++..... ...+.+.+|+.+|+.++||||+++++++.  ...++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEC
T ss_conf             46089989721748099999999999799999984566412799999999999857998884696540467436798864


Q ss_pred             CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             48999444310269999999888999999999999998523999602033157908984799200004432102454444
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.+++.   ....+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|+.+.....
T Consensus        85 ~~gg~L~~~l~---~~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          85 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             CCCCCHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCC
T ss_conf             58980899975---37999999999999999999999997---5983575468997887899879832314224046886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             678864111379999866678111114999-9604688899999999909999998558999984100001258778999
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ...      .+..+||+.|+|||++.+..+ +.++|||||||+||+|+||++||..................    ....
T Consensus       159 ~~~------~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~----~~~~  228 (271)
T d1nvra_         159 ERL------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT----YLNP  228 (271)
T ss_dssp             ECC------BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT----TSTT
T ss_pred             CCC------CCCEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC----CCCC
T ss_conf             531------113255747428728618999997101617379999998299788889859999999863888----7886


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             935699999999998500979999969999
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      ....+..+.+|+.+||+.+|.+||++ +++
T Consensus       229 ~~~~s~~~~~li~~~L~~dP~~R~t~-~ei  257 (271)
T d1nvra_         229 WKKIDSAPLALLHKILVENPSARITI-PDI  257 (271)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             44699999999999767996689099-999

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=0  Score=364.73  Aligned_cols=248  Identities=21%  Similarity=0.337  Sum_probs=203.0

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEEC
Q ss_conf             89775411410086689999987--908999993589999903799999999825999700130534--77128999734
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL  603 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey~  603 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++........+.+.+|+.+|+.++|||||++++++  ....++||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf             57589889840768199999988999899999984524316999999999998679979992999999899999999857


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEC--CCCCEEEECCCCCCCCCCCC
Q ss_conf             8999444310269999999888999999999999998523999602033157908984--79920000443210245444
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld--~~~~vKL~DFGla~~~~~~~  681 (888)
                      +||+|.+++..  ....+++..+..|+.||+.||.|||+   +||+||||||+|||++  .++.+||+|||+|+.+....
T Consensus       106 ~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         106 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             CSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred             CCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHH---CCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCCC
T ss_conf             99889999976--23789999999999999999999975---69760001546736416889869995452104425654


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             46788641113799998666781111149999604688899999999909999998558999984100001258778999
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..         ....||+.|+|||++.+..|+.++|||||||++|+|++|++||...+................   ...
T Consensus       181 ~~---------~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~  248 (350)
T d1koaa2         181 SV---------KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD---DSA  248 (350)
T ss_dssp             CE---------EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC---CGG
T ss_pred             CC---------CEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC---CCC
T ss_conf             32---------000686242188997589987267655465999999859899899799999999984788989---422


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             93569999999999850097999996999999
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~  793 (888)
                      +...+..+.+|+.+||..+|.+||++ .++++
T Consensus       249 ~~~~s~~~~~li~~~L~~dP~~R~t~-~eil~  279 (350)
T d1koaa2         249 FSGISEDGKDFIRKLLLADPNTRMTI-HQALE  279 (350)
T ss_dssp             GGGCCHHHHHHHHHHCCSSGGGSCCH-HHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHC
T ss_conf             35899999999999756896679089-99862

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=365.52  Aligned_cols=246  Identities=24%  Similarity=0.402  Sum_probs=200.4

Q ss_pred             CEEEECCCEEEEEEEECC----EEEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEEEEECCCC
Q ss_conf             114100866899999879----089999935899999--037999999998259997001305347-7128999734899
Q 002719          534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG  606 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~----~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV~Ey~~~g  606 (888)
                      ++||+|+||.||+|.+..    ..||||++.......  .+.|.+|+.+|++++|||||+++|+|. +..++||||+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCC
T ss_conf             78345878299999981697385999999880108989999999999999867998985277775059779999747889


Q ss_pred             CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             94443102699999998889999999999999985239996020331579089847992000044321024544446788
Q 002719          607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN  686 (888)
Q Consensus       607 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~  686 (888)
                      +|.+++..   ...+++..++.|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+.......  
T Consensus        93 ~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~--  164 (277)
T d1xbba_          93 PLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--  164 (277)
T ss_dssp             EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE--
T ss_pred             CHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCC--
T ss_conf             68999752---2578999999999999999766874---795567776113102356751234134533134323443--


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf             64111379999866678111114999960468889999999990-99999985589999841000012587789999356
Q 002719          687 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ  765 (888)
Q Consensus       687 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~  765 (888)
                         .......||+.|+|||++.++.++.++|||||||++|||+| |++||......+......      .......|...
T Consensus       165 ---~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~------~~~~~~~p~~~  235 (277)
T d1xbba_         165 ---KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE------KGERMGCPAGC  235 (277)
T ss_dssp             ---EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH------TTCCCCCCTTC
T ss_pred             ---CCCCCCCCCCEECCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH------CCCCCCCCCCC
T ss_conf             ---224456778420391665379998434430340313289658999999989999999998------28999998656


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
Q ss_conf             99999999998500979999969999997300
Q 002719          766 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       766 ~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~  797 (888)
                      +..+.+|+.+||+.+|.+||++ .++...|+.
T Consensus       236 ~~~~~~li~~cl~~dp~~RPs~-~~i~~~L~~  266 (277)
T d1xbba_         236 PREMYDLMNLCWTYDVENRPGF-AAVELRLRN  266 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHC
T ss_conf             7999999999758897689098-999998528

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=363.05  Aligned_cols=257  Identities=26%  Similarity=0.438  Sum_probs=206.0

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEECC------EEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEE
Q ss_conf             2897754114100866899999879------08999993589999-9037999999998259997001305347--7128
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT  597 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~  597 (888)
                      .+.|...+.||+|+||.||+|.+..      ..||||++...... ....|.+|+.+|++++|||||+++|+|.  +..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEE
T ss_conf             89968615981177909999999689987879999999884459689999999999998568987832367783388038


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf             99973489994443102699999998889999999999999985239996020331579089847992000044321024
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~  677 (888)
                      +||||+.+|++.+.+...  ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+
T Consensus        86 ~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          86 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEEECCCCCCHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCEEEECCCCEEEECCCCHHHCC
T ss_conf             999721357402221023--4542089999999999985412121---23425765644278889984998455103003


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             544446788641113799998666781111149999604688899999999909-9999985589999841000012587
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      ........     ......||+.|+|||++.++.++.++|||||||+||||++| .+|+...........      +.+.
T Consensus       161 ~~~~~~~~-----~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~------i~~~  229 (283)
T d1mqba_         161 EDDPEATY-----TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA------INDG  229 (283)
T ss_dssp             ------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH------HHTT
T ss_pred             CCCCCCCE-----EECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH------HHCC
T ss_conf             57876526-----742677773434888870499997355634489899999679886556899999999------8635


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             78999935699999999998500979999969999997300000
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      .....|...+..+.+|+.+||+.+|.+||++ .++++.|+.+..
T Consensus       230 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-~eil~~L~~l~~  272 (283)
T d1mqba_         230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKF-ADIVSILDKLIR  272 (283)
T ss_dssp             CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHH
T ss_conf             7899850457999999999776797689399-999999999866

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=0  Score=363.04  Aligned_cols=263  Identities=26%  Similarity=0.436  Sum_probs=213.7

Q ss_pred             HHHHHHCCCCCCCCEEEECCCEEEEEEEECC-------EEEEEEEECCCCCCC-HHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             6662102897754114100866899999879-------089999935899999-03799999999825999700130534
Q 002719          521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC  592 (888)
Q Consensus       521 ~ei~~~~~~y~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~L~HpnIv~l~g~~  592 (888)
                      .+++...++|++.+.||+|+||.||+|.+.+       ..||||++....... ...|.+|+.+|+.++||||++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHCCCCHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             31138988938867982078839999998887657788299999988210857999999999999966899765524666


Q ss_pred             C--CCEEEEEEECCCCCHHHHHHCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             7--71289997348999444310269---------------------999999888999999999999998523999602
Q 002719          593 P--EVWTLVYEYLPNGSLEDRLSCKD---------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV  649 (888)
Q Consensus       593 ~--~~~~lV~Ey~~~gsL~~~L~~~~---------------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIi  649 (888)
                      .  ...++||||+++|+|.+++....                     ....+++..++.|+.|++.||.|||+   ++|+
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iv  162 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV  162 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred             CCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCEE
T ss_conf             0598038999815899299999852755421000011100121034678898999999999999998554135---7868


Q ss_pred             ECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             03315790898479920000443210245444467886411137999986667811111499996046888999999999
Q 002719          650 HGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLL  729 (888)
Q Consensus       650 HrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ell  729 (888)
                      ||||||+|||++.++.+||+|||+|+.+........      .+...|++.|+|||++.+..|+.++|||||||++|||+
T Consensus       163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell  236 (301)
T d1lufa_         163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA------DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF  236 (301)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----------CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCEEECCCCCEEECCCHHHEECCCCCCCCC------CCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHH
T ss_conf             548840116898999289833144211367764111------57777676767989972688980563025236299998


Q ss_pred             HCC-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             099-9999855899998410000125877899993569999999999850097999996999999730000
Q 002719          730 TGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       730 tG~-~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      +|. +||......+.....      ........|...+..+.+|+.+||+.+|.+||++ .+|.+.|+.+.
T Consensus       237 ~~~~~p~~~~~~~e~~~~v------~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~-~ev~~~L~~i~  300 (301)
T d1lufa_         237 SYGLQPYYGMAHEEVIYYV------RDGNILACPENCPLELYNLMRLCWSKLPADRPSF-CSIHRILQRMC  300 (301)
T ss_dssp             TTTCCTTTTSCHHHHHHHH------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHTT
T ss_pred             CCCCCCCCCCCHHHHHHHH------HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHC
T ss_conf             0689999998999999999------7399788873252999999999748896579399-99999999842

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=0  Score=363.27  Aligned_cols=247  Identities=21%  Similarity=0.342  Sum_probs=202.9

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEEEC
Q ss_conf             89775411410086689999987--9089999935899999037999999998259997001305347--7128999734
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~Ey~  603 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++..........+.+|+.+|+.++|||||++++++.  ...|+||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf             03599899931778299999998999799999988726467999999999998679979891999999899999999828


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEC--CCCCEEEECCCCCCCCCCCC
Q ss_conf             8999444310269999999888999999999999998523999602033157908984--79920000443210245444
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld--~~~~vKL~DFGla~~~~~~~  681 (888)
                      +||+|.+.+..  ...++++..+..|+.||+.||.|||+   +||+||||||+|||++  .++.+||+|||+|..+....
T Consensus       109 ~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         109 SGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             CCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCCHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCCCC
T ss_conf             99808888986--38998999999999999999999997---79265131445531134678848995256303437887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             46788641113799998666781111149999604688899999999909999998558999984100001258778999
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW  761 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~  761 (888)
                      ..         ....||+.|+|||++.+..|+.++|||||||+||+|+||++||..................   .....
T Consensus       184 ~~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~~  251 (352)
T d1koba_         184 IV---------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE---FDEDA  251 (352)
T ss_dssp             CE---------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC---CCSST
T ss_pred             CE---------EECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC---CCCCC
T ss_conf             20---------1004764534899974799897633389899999999688998997999999999847889---89300


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             9356999999999985009799999699999
Q 002719          762 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       762 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      +...+..+.+|+.+||+.+|.+||++ .+++
T Consensus       252 ~~~~s~~~~~li~~~L~~dp~~R~s~-~eil  281 (352)
T d1koba_         252 FSSVSPEAKDFIKNLLQKEPRKRLTV-HDAL  281 (352)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             24799999999999756996689189-9996

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=367.55  Aligned_cols=250  Identities=25%  Similarity=0.385  Sum_probs=202.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCCEEEEECCCC----CCEEEE
Q ss_conf             89775411410086689999987--9089999935899999--037999999998259997001305347----712899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~L~HpnIv~l~g~~~----~~~~lV  599 (888)
                      ++|++.+.||+|+||.||+|...  +..||+|++.......  ...+.+|+.+|++++|||||++++++.    ...|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
T ss_conf             33799679830889199999999999799999987465797999999999999997789998248999991789989999


Q ss_pred             EEECCCCCHHHHHHCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             9734899944431026-99999998889999999999999985239--99602033157908984799200004432102
Q 002719          600 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~--~~gIiHrDLKp~NILld~~~~vKL~DFGla~~  676 (888)
                      |||+++|+|.+++... .....+++..++.++.|++.||.|||+..  .++|+||||||+|||++.++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECCCEEE
T ss_conf             95689993899998515457899999999999999999999997167788788586765425747888579800100032


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             45444467886411137999986667811111499996046888999999999099999985589999841000012587
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      +......        .....||+.|+|||++.+..|+.++|||||||++|+|+||++||...+..+......  ...   
T Consensus       164 ~~~~~~~--------~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~--~~~---  230 (269)
T d2java1         164 LNHDTSF--------AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR--EGK---  230 (269)
T ss_dssp             C-------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTC---
T ss_pred             CCCCCCC--------CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHH--CCC---
T ss_conf             2457775--------566778823279999839999938988752789999801889989989999999997--189---


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             789999356999999999985009799999699999
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                       ....|...++.+.+|+.+||+.+|.+||++ .+++
T Consensus       231 -~~~~~~~~s~~l~~li~~~L~~dp~~Rps~-~ell  264 (269)
T d2java1         231 -FRRIPYRYSDELNEIITRMLNLKDYHRPSV-EEIL  264 (269)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             -988974359999999999767995579189-9997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=367.67  Aligned_cols=251  Identities=24%  Similarity=0.376  Sum_probs=198.3

Q ss_pred             HCCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC-HHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEE
Q ss_conf             0289775411410086689999987--9089999935899999-037999999998259997001305347--7128999
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       526 ~~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~  600 (888)
                      ..++|++.++||+|+||+||+|...  +..||+|++....... ...+.+|+.+|+.++|||||+++++|.  ...++||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf             75688897897127780999999989996999999875409789999999999998679999994999999899999999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++...   ..+++..+..++.|++.||.|||+.  +||+||||||+|||++.++.+||+|||+|+.+...
T Consensus        84 Ey~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             ECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             ECCCCCCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHH--CCEECCCCCHHHEEECCCCCEEEEECCCCCCCCCC
T ss_conf             767998689987424---9999999999999999999999985--99971445779946878998999548776256788


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH-H----CCCC----
Q ss_conf             446788641113799998666781111149999604688899999999909999998558999984-1----0000----
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-T----GKLK----  751 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~-~----~~~~----  751 (888)
                      ..          +..+||+.|+|||++.+..|+.++|||||||++|||++|+.||...+....... .    +...    
T Consensus       159 ~~----------~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  228 (322)
T d1s9ja_         159 MA----------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP  228 (322)
T ss_dssp             TC-------------CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------
T ss_pred             CC----------CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             62----------11137714119468758998948889989999999998889989988789999998875177545774


Q ss_pred             ---------------------------CCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ---------------------------12587789999-356999999999985009799999699999
Q 002719          752 ---------------------------NLLDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 ---------------------------~~ld~~~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                                 ..........+ ...+..+.+|+.+||..+|.+||++ ++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta-~e~L  296 (322)
T d1s9ja_         229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL-KQLM  296 (322)
T ss_dssp             -----------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             2123332211112223541347788766502687667644489999999999868994679089-9996

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=361.41  Aligned_cols=252  Identities=23%  Similarity=0.405  Sum_probs=206.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEECC------EEEEEEEECCC-CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEE
Q ss_conf             897754114100866899999879------08999993589-9999037999999998259997001305347-712899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~~------~~VAIK~l~~~-~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV  599 (888)
                      .+|++.++||+|+||+||+|.+..      ..||+|.+... .....+.|.+|+.+|++++|||||+++|+|. +..+++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf             99978319820899299999995899889899999996513497999999999999986799888158999961983699


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCC
Q ss_conf             97348999444310269999999888999999999999998523999602033157908984799200004432102454
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~  679 (888)
                      +||+.+|+|.+.+...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus        89 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          89 TQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             EEECCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHCCEECCCCCEEEECCCCCEECCC
T ss_conf             9842687401011133--4579999999999999999999987---6950476212031167998758602552223354


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHH--HHHHHHCCCCCCCCC
Q ss_conf             444678864111379999866678111114999960468889999999990-99999985589--999841000012587
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDP  756 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~ld~  756 (888)
                      ......      .....||+.|+|||++.++.|+.++|||||||+||||+| |.+||......  ...+..+        
T Consensus       164 ~~~~~~------~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~--------  229 (317)
T d1xkka_         164 EEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--------  229 (317)
T ss_dssp             TCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT--------
T ss_pred             CCCCCC------CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC--------
T ss_conf             445322------365105864467088746999835654407999999997799999999989999999759--------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             7899993569999999999850097999996999999730000
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      .....|...+..+.+|+.+||..+|.+||++ .+++..|..+.
T Consensus       230 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-~eil~~l~~~~  271 (317)
T d1xkka_         230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMA  271 (317)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             9899985568999999998478993469199-99999999987

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=362.73  Aligned_cols=241  Identities=26%  Similarity=0.440  Sum_probs=201.6

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEE
Q ss_conf             89775411410086689999987--908999993589---9999037999999998259997001305347--7128999
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~  600 (888)
                      ++|++.+.||+|+||.||+|...  +..||+|++...   .......+.+|+.+++.++||||+++++++.  ...++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf             37699889851778589999998999499999981688567689999999999998568888885999999899989998


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+++|+|.+++...   ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|......
T Consensus        86 Ey~~~g~L~~~l~~~---~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             EECCCCCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEEECCCCCEECCCCCEEECCCCEEEECCCC
T ss_conf             504798589887504---899999999999999999999998---89465220234414668998711555633544888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990999999855899998410000125877899
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ..          ....||+.|+|||++.+..|+.++|||||||+||+|++|++||...+.........+.       ...
T Consensus       160 ~~----------~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~-------~~~  222 (263)
T d2j4za1         160 RR----------TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------EFT  222 (263)
T ss_dssp             CC----------EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-------CCC
T ss_pred             CC----------CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC-------CCC
T ss_conf             52----------3557887634999975899893144046759999983299998889999999999718-------999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             99356999999999985009799999699999
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      +|...+..+.+|+.+||+.+|.+||++ ++++
T Consensus       223 ~p~~~s~~~~~li~~~L~~dp~~R~t~-~eil  253 (263)
T d2j4za1         223 FPDFVTEGARDLISRLLKHNPSQRPML-REVL  253 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             986689999999999764797689099-9997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=357.78  Aligned_cols=251  Identities=25%  Similarity=0.445  Sum_probs=209.1

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEECC-EEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEEEC
Q ss_conf             2897754114100866899999879-089999935899999037999999998259997001305347--7128999734
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~Ey~  603 (888)
                      .++|++.++||+|+||+||+|.+++ ..||||+++... ...+.|.+|+.++++++||||++++|+|.  ...++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             HHHCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECC
T ss_conf             69979968982078839999998899899999987475-77899999999999668986015889985078169999704


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++...  ...+++..+++++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+++.+......
T Consensus        82 ~~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~  156 (258)
T d1k2pa_          82 ANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  156 (258)
T ss_dssp             TTEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred             CCCCHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCCCCE
T ss_conf             899388864102--4677689999999999999998754---68434665413588769984798861442023578722


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             78864111379999866678111114999960468889999999990-99999985589999841000012587789999
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .       .....||+.|+|||++.+..++.++|||||||++|||+| |+.||......+.......      ......|
T Consensus       157 ~-------~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~------~~~~~~p  223 (258)
T d1k2pa_         157 S-------SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ------GLRLYRP  223 (258)
T ss_dssp             C-------CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT------TCCCCCC
T ss_pred             E-------ECCCCCCCCCCCCHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH------CCCCCCC
T ss_conf             5-------24657887757807863799885210336432467397559999889999999999980------7978996


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
Q ss_conf             35699999999998500979999969999997300
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP  797 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~  797 (888)
                      ...+..+.+|+.+||+.+|.+||++ ++++..|.+
T Consensus       224 ~~~~~~l~~li~~cl~~dP~~RPt~-~eil~~L~d  257 (258)
T d1k2pa_         224 HLASEKVYTIMYSCWHEKADERPTF-KILLSNILD  257 (258)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHC
T ss_conf             5465999999999766897689399-999987418

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=0  Score=362.20  Aligned_cols=247  Identities=23%  Similarity=0.330  Sum_probs=201.6

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEE
Q ss_conf             289775411410086689999987--908999993589999-9037999999998259997001305347--71289997
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~E  601 (888)
                      .+.|++.+.||+|+||+||+|...  +..||||++...... ....+.+|+.+|+.++|||||++++++.  ...|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf             66669988994065839999999999989999998157731289999999999986799899919899998998889885


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEC---CCCCEEEECCCCCCCCC
Q ss_conf             348999444310269999999888999999999999998523999602033157908984---79920000443210245
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFGISRFLS  678 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld---~~~~vKL~DFGla~~~~  678 (888)
                      |++||+|.+++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||+.   .++.+||+|||+|+...
T Consensus        88 ~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          88 LVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             CCCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECC
T ss_conf             2689848886530---3678878999999999999875241---305568704630011046888249983154358725


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             44446788641113799998666781111149999604688899999999909999998558999984100001258778
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                      .....         ....||+.|+|||++.+..|+.++|||||||+||+|++|++||..................   ..
T Consensus       162 ~~~~~---------~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~---~~  229 (307)
T d1a06a_         162 PGSVL---------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE---FD  229 (307)
T ss_dssp             --------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC---CC
T ss_pred             CCCEE---------EEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC---CC
T ss_conf             89704---------4003284225918873799980787345159999998597999998999999998616877---78


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             9999356999999999985009799999699999
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      ...+...++.+.+|+.+||+.+|.+||++ .+++
T Consensus       230 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~-~eil  262 (307)
T d1a06a_         230 SPYWDDISDSAKDFIRHLMEKDPEKRFTC-EQAL  262 (307)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             76666789999999999760897579189-9986

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=358.86  Aligned_cols=257  Identities=30%  Similarity=0.466  Sum_probs=209.1

Q ss_pred             HCCCCCCCCEEEECCCEEEEEEEECC-EEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEEEEEEC
Q ss_conf             02897754114100866899999879-089999935899999037999999998259997001305347-7128999734
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYL  603 (888)
Q Consensus       526 ~~~~y~~~~~LG~G~fG~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~lV~Ey~  603 (888)
                      ..++|++...||+|+||.||+|.+.+ ..||||++.... ...+.|.+|+.+|++++|||||+++|+|. +..++||||+
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~   93 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM   93 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred             CHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEC
T ss_conf             779979846993079809999999999999999988044-8889999999999866667886899998239759999944


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|..++.... ...+++..++.|+.+|+.||+|||.   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus        94 ~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~  169 (285)
T d1fmka3          94 SKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  169 (285)
T ss_dssp             TTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             CCCCHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHH---HHEECCCCCCEEEEECCCCCEEECCCCHHHHCCCCCCE
T ss_conf             7994354200003-5530599999999999999998754---11433531230799989992998442555425688733


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             788641113799998666781111149999604688899999999909-9999985589999841000012587789999
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      .       .....||+.|+|||++..+.++.++|||||||+||||+|| ++|+..............      ......+
T Consensus       170 ~-------~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~------~~~~~~~  236 (285)
T d1fmka3         170 A-------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER------GYRMPCP  236 (285)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT------TCCCCCC
T ss_pred             E-------ECCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH------CCCCCCC
T ss_conf             5-------24545566545808983799891774132358999998689999988889999999982------6899998


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             356999999999985009799999699999973000003
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~~  801 (888)
                      ...+..+.+|+.+||+.+|.+||++ ++|...|+.+...
T Consensus       237 ~~~~~~l~~li~~cl~~dP~~Rps~-~~i~~~L~~~~~~  274 (285)
T d1fmka3         237 PECPESLHDLMCQCWRKEPEERPTF-EYLQAFLEDYFTS  274 (285)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTTTSC
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHCC
T ss_conf             3237999999999756697589199-9999987666238

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=0  Score=357.32  Aligned_cols=240  Identities=27%  Similarity=0.354  Sum_probs=195.7

Q ss_pred             CCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC---HHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEE
Q ss_conf             9775411410086689999987--9089999935899999---03799999999825999700130534--771289997
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       529 ~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~E  601 (888)
                      .|+..++||+|+||.||+|...  +..||||++.......   ...+.+|+.+|+.++|||||++++++  ....++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEE
T ss_conf             56762797018880999999989993999999844443588999999999999997789998238999998998899998


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             34899944431026999999988899999999999999852399960203315790898479920000443210245444
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+++|+|..++..   ..++++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+|...... 
T Consensus        96 ~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-  168 (309)
T d1u5ra_          96 YCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-  168 (309)
T ss_dssp             CCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred             ECCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCCCEEEECCCCCEEEEECCCCCCCCCC-
T ss_conf             0699945789973---7999999999999999999999986---89766678842179879997898443653346778-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             4678864111379999866678111114---9999604688899999999909999998558999984100001258778
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA  758 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~  758 (888)
                                 ....||+.|+|||++.+   +.|+.++|||||||++|+|++|++||..............  ...... 
T Consensus       169 -----------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~--~~~~~~-  234 (309)
T d1u5ra_         169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPAL-  234 (309)
T ss_dssp             -----------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCCC-
T ss_pred             -----------CCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH--CCCCCC-
T ss_conf             -----------731347663688998346788867214545589999999878899999799999999982--899988-


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             9999356999999999985009799999699999
Q 002719          759 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       759 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                        .+...++.+.+|+.+||+.+|.+||++ .+++
T Consensus       235 --~~~~~s~~~~~li~~~L~~dP~~Rpt~-~ell  265 (309)
T d1u5ra_         235 --QSGHWSEYFRNFVDSCLQKIPQDRPTS-EVLL  265 (309)
T ss_dssp             --SCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHT
T ss_pred             --CCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             --878889999999999773796579189-9997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=362.86  Aligned_cols=244  Identities=25%  Similarity=0.361  Sum_probs=203.1

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEE
Q ss_conf             89775411410086689999987--908999993589---9999037999999998259997001305347--7128999
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~  600 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++...   .......+.+|+.+|++++||||+++++++.  +..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEE
T ss_conf             87789889850879099999998999799999986577557778999999999998768888617999999899889999


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|.+++...   ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus        88 Ey~~gg~L~~~~~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             ECCCCCCHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHCC---CCEECCCCCCCCCCCCCCCEEEECCCCCCEECCCC
T ss_conf             704898777765315---999999999999999999976216---50884767741236688853886032102422567


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990999999855899998410000125877899
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .....      .....||+.|+|||++.+..|+.++|||||||+||+|+||++||...+...........       ...
T Consensus       162 ~~~~~------~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~-------~~~  228 (288)
T d1uu3a_         162 SKQAR------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-------EYD  228 (288)
T ss_dssp             --------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT-------CCC
T ss_pred             CCCCC------CCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-------CCC
T ss_conf             76433------35556775525844002689896662304569999980388998995999999999718-------999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             9935699999999998500979999969999
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      +|...+..+.+|+.+||+.+|.+||++ +++
T Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~t~-~e~  258 (288)
T d1uu3a_         229 FPEKFFPKARDLVEKLLVLDATKRLGC-EEM  258 (288)
T ss_dssp             CCTTCCHHHHHHHHTTSCSSGGGSTTS-GGG
T ss_pred             CCCCCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             985479999999999855797689197-897

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=358.27  Aligned_cols=239  Identities=22%  Similarity=0.278  Sum_probs=200.4

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEE
Q ss_conf             289775411410086689999987--908999993589---9999037999999998259997001305347--712899
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV  599 (888)
                      -++|++.+.||+|+||.||++...  +..||||++.+.   .......+.+|+.+|+.++||||+++++++.  +..|+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf             47428988983176849999999899989999998156544979999999999999867999887787640356421110


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCC
Q ss_conf             97348999444310269999999888999999999999998523999602033157908984799200004432102454
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~  679 (888)
                      |||++||+|.+++...   ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|+....
T Consensus        84 ~ey~~gg~L~~~~~~~---~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EECCCCCCHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf             0035798605555325---677599999999999652113431---5962246477784765899888820565200356


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             44467886411137999986667811111499996046888999999999099999985589999841000012587789
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....        ....+||+.|+|||++.+..|+.++|||||||+||+|++|++||...+..........  .     ..
T Consensus       158 ~~~~--------~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~--~-----~~  222 (337)
T d1o6la_         158 DGAT--------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--E-----EI  222 (337)
T ss_dssp             TTCC--------BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--C-----CC
T ss_pred             CCCC--------CCCCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHC--C-----CC
T ss_conf             7862--------0551008899666650489888333102230678899878999999699999999852--8-----99


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             999356999999999985009799999
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPE  786 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs  786 (888)
                      .+|...+..+.+|+.+||+.+|.+||+
T Consensus       223 ~~p~~~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         223 RFPRTLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCCCCCHHHHHHHHHHCCCCCHHHCC
T ss_conf             898668999999998666389344225

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=353.10  Aligned_cols=241  Identities=23%  Similarity=0.391  Sum_probs=190.8

Q ss_pred             CCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC--CHHHHHHHHHHHHHCCCCCEEEEECCCC------CCEEEE
Q ss_conf             775411410086689999987--908999993589999--9037999999998259997001305347------712899
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTLV  599 (888)
Q Consensus       530 y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~L~HpnIv~l~g~~~------~~~~lV  599 (888)
                      |.+..+||+|+||+||+|.+.  +..||+|.+......  ....|.+|+++|++++|||||++++++.      ...++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEE
T ss_conf             88516970082849999999999959999998512279899999999999998579998506999984033458889999


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--EEECCCCCCCEEEC-CCCCEEEECCCCCCC
Q ss_conf             973489994443102699999998889999999999999985239996--02033157908984-799200004432102
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLD-ANFVSKLSDFGISRF  676 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~g--IiHrDLKp~NILld-~~~~vKL~DFGla~~  676 (888)
                      |||+++|+|.+++...   ..+++..+..++.||+.||.|||+   ++  |+||||||+|||++ .++.+||+|||+|+.
T Consensus        91 mE~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EECCCCCCHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEECCCCHHHCEEECCCCCEEEEECCCCEE
T ss_conf             9578989489997513---554699999999999999999997---8997996876743511667999889800576542


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             45444467886411137999986667811111499996046888999999999099999985589999841000012587
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      ......          ....||+.|+|||++.+ .|+.++|||||||+||+|++|++||.............  ..... 
T Consensus       165 ~~~~~~----------~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i--~~~~~-  230 (270)
T d1t4ha_         165 KRASFA----------KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV--TSGVK-  230 (270)
T ss_dssp             CCTTSB----------EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH--TTTCC-
T ss_pred             CCCCCC----------CCCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH--HCCCC-
T ss_conf             368766----------77553813008988478-99986711007999999987889998765599999999--73899-


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             789999356999999999985009799999699999
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                       ...++...++.+.+|+.+||+.+|.+||++ .+++
T Consensus       231 -~~~~~~~~~~~~~~li~~~l~~dp~~R~s~-~ell  264 (270)
T d1t4ha_         231 -PASFDKVAIPEVKEIIEGCIRQNKDERYSI-KDLL  264 (270)
T ss_dssp             -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             -865675578999999999763797589299-9996

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=357.17  Aligned_cols=255  Identities=24%  Similarity=0.374  Sum_probs=206.2

Q ss_pred             HCCCCCCCCEEEECCCEEEEEEEECC-----EEEEEEEECCCCCCC-HHHHHHHHHHHHHCCCCCEEEEECCCC-CCEEE
Q ss_conf             02897754114100866899999879-----089999935899999-037999999998259997001305347-71289
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL  598 (888)
Q Consensus       526 ~~~~y~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~~-~~~~~~Ei~iL~~L~HpnIv~l~g~~~-~~~~l  598 (888)
                      ..++|++.+.||+|+||.||+|.+..     ..||||.+....... ...|.+|+.+|++++|||||+++|+|. +..++
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~i   84 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI   84 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred             CHHHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEE
T ss_conf             88996987799307882999999936996449999999365668799999999999998689999856988995374799


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCC
Q ss_conf             99734899944431026999999988899999999999999852399960203315790898479920000443210245
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS  678 (888)
Q Consensus       599 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~  678 (888)
                      ||||+++|+|.+++...  ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        85 v~E~~~~g~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEECCCCCHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHCC---CCEECCCCCHHHEEECCCCCEEECCCHHHEECC
T ss_conf             99840698077654224--7899999999999999877523022---674414102655320678967876503421336


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             4444678864111379999866678111114999960468889999999990-999999855899998410000125877
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPL  757 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~  757 (888)
                      ......       .+...||+.|+|||++.++.++.++|||||||++|||+| |.+||.............      ...
T Consensus       160 ~~~~~~-------~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~------~~~  226 (273)
T d1mp8a_         160 DSTYYK-------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE------NGE  226 (273)
T ss_dssp             ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH------TTC
T ss_pred             CCCCEE-------CCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH------CCC
T ss_conf             776233-------0540058310326675169988745244424789999826999988899999999998------189


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             899993569999999999850097999996999999730000
Q 002719          758 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       758 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      ....|...+..+.+|+.+||..+|.+||++ .++++.|+.+.
T Consensus       227 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~-~ei~~~L~~i~  267 (273)
T d1mp8a_         227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLSTIL  267 (273)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             998987779999999999768797689299-99999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=351.71  Aligned_cols=240  Identities=25%  Similarity=0.364  Sum_probs=200.2

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEE
Q ss_conf             89775411410086689999987--908999993589---9999037999999998259997001305347--7128999
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~  600 (888)
                      ++|++.+.||+|+||+||+|...  +..||||++...   .....+.+.+|+.+|+.++||||+++++++.  ...|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCEEEEEE
T ss_conf             47088889720768089999998999799999984577548899999999999998636967533035685288005676


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||++||+|..++..   ...+++.....++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|+.....
T Consensus        84 E~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          84 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EECCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHHCC---CCEECCCCCCHHEEECCCCCEEEECCCCCEEECCC
T ss_conf             50378632234322---2211100799999999876554124---76770556810503868998898317521671245


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990999999855899998410000125877899
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .           ....||+.|+|||++.+..|+.++|||||||+||+|+||++||...+...........       ...
T Consensus       158 ~-----------~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~-------~~~  219 (316)
T d1fota_         158 T-----------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-------ELR  219 (316)
T ss_dssp             B-----------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC-------CCC
T ss_pred             C-----------CCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC-------CCC
T ss_conf             6-----------4345763435999983899980430465333689997598999996999999999708-------988


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCC-----CHHHHHH
Q ss_conf             9935699999999998500979999-----9699999
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRP-----ELGKDVW  792 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RP-----s~~~~v~  792 (888)
                      +|...+..+.+++.+||..+|.+||     ++ ++++
T Consensus       220 ~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~-~~il  255 (316)
T d1fota_         220 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGT-EDVK  255 (316)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTT-HHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCHHHCCCCCHHHH-HHHH
T ss_conf             99778999999999995449976664310219-9998

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=351.87  Aligned_cols=247  Identities=23%  Similarity=0.332  Sum_probs=200.7

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC------CHHHHHHHHHHHHHCCCCCEEEEECCCC--CCE
Q ss_conf             289775411410086689999987--908999993589999------9037999999998259997001305347--712
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVW  596 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~------~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~  596 (888)
                      .+.|++.+.||+|+||.||+|...  +..||||++......      ..+.+.+|+.+|+.++|||||++++++.  ...
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf             56779827981178959999999999989999998756632134068999999999999867998999388999979989


Q ss_pred             EEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC----CEEEECCC
Q ss_conf             89997348999444310269999999888999999999999998523999602033157908984799----20000443
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFG  672 (888)
Q Consensus       597 ~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~----~vKL~DFG  672 (888)
                      ++||||+++|+|.+++...   ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++    .+||+|||
T Consensus        89 ~iv~E~~~gg~L~~~i~~~---~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG  162 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG  162 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEECCCCCCCCCHHCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCEEEEECCCCCCCCEEECCHH
T ss_conf             9999867786431001035---642155789999999999876662---5422113330127982589866646964334


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             21024544446788641113799998666781111149999604688899999999909999998558999984100001
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN  752 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~  752 (888)
                      +|.........         ....||+.|+|||++.+..++.++|||||||+||+|++|++||.................
T Consensus       163 ~a~~~~~~~~~---------~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~  233 (293)
T d1jksa_         163 LAHKIDFGNEF---------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY  233 (293)
T ss_dssp             TCEECTTSCBC---------SCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC
T ss_pred             HHHHCCCCCCC---------CCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             42105777631---------224777743099998189999766522140999999708899889999999999981688


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             2587789999356999999999985009799999699999
Q 002719          753 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       753 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      ..   ....+...+..+.+|+.+||+.+|.+||++ ++++
T Consensus       234 ~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-~eil  269 (293)
T d1jksa_         234 EF---EDEYFSNTSALAKDFIRRLLVKDPKKRMTI-QDSL  269 (293)
T ss_dssp             CC---CHHHHTTSCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred             CC---CCHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             88---701047889999999999863896689199-9996

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=349.10  Aligned_cols=256  Identities=26%  Similarity=0.391  Sum_probs=201.9

Q ss_pred             CCCEEEECCCEEEEEEEECC-----EEEEEEEECCCC-CCCHHHHHHHHHHHHHCCCCCEEEEECCCC---CCEEEEEEE
Q ss_conf             54114100866899999879-----089999935899-999037999999998259997001305347---712899973
Q 002719          532 PSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEY  602 (888)
Q Consensus       532 ~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~-~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~---~~~~lV~Ey  602 (888)
                      ...+||+|+||+||+|.+..     ..||||++.... ......|.+|+++|++++||||++++|+|.   ...++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             CCEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEE
T ss_conf             66698136880999999977998799999999884369789999999999998678999867867898069943899987


Q ss_pred             CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             48999444310269999999888999999999999998523999602033157908984799200004432102454444
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +++|+|.+++..  ....+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       111 ~~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         111 MKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             EECCCHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCHHHEEECCCCCEEEECCCCHHHCCCCCC
T ss_conf             406741442101--34540489999999998876520033---6762577668757677999889910652322556655


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             67886411137999986667811111499996046888999999999099999985589999841000012587789999
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                      ....    ......||+.|+|||.+.++.++.++||||||+++|||+||..||...........     .+........|
T Consensus       186 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~-----~i~~g~~~~~p  256 (311)
T d1r0pa_         186 DSVH----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQP  256 (311)
T ss_dssp             CCTT----CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHH-----HHHTTCCCCCC
T ss_pred             CCCE----ECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHCCCCCCCC
T ss_conf             5310----02565556455676887437999745746619999999978999988899999999-----99808988996


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf             3569999999999850097999996999999730000038
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC  802 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~~~  802 (888)
                      ...++.+.+|+.+||..+|++||++ .+|++.|+.+....
T Consensus       257 ~~~~~~l~~li~~cl~~dP~~RPs~-~ei~~~L~~i~~~~  295 (311)
T d1r0pa_         257 EYCPDPLYEVMLKCWHPKAEMRPSF-SELVSRISAIFSTF  295 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHHHH
T ss_conf             4475999999999768897689399-99999999999752

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=0  Score=351.53  Aligned_cols=244  Identities=26%  Similarity=0.331  Sum_probs=193.1

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCC---CCCHHHHHHH---HHHHHHCCCCCEEEEECCCC--CCEE
Q ss_conf             89775411410086689999987--9089999935899---9990379999---99998259997001305347--7128
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQE---IDILSKIRHPNLVTLVGACP--EVWT  597 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~---~~~~~~~~~E---i~iL~~L~HpnIv~l~g~~~--~~~~  597 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++....   ......+.+|   +.+++.++|||||++++++.  +..|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEE
T ss_conf             76851018842889099999999999799999984587542667999999999999985089985889999999899889


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf             99973489994443102699999998889999999999999985239996020331579089847992000044321024
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~  677 (888)
                      +||||++||+|.+++...   ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+
T Consensus        84 ivmE~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             EEEEECCCCCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCEEECCCEEEECCCCCEEEEEECEEEEC
T ss_conf             999914898389998732---553278999999999999999997---79622044422167858896798220102333


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH-HHHHCCCCCCCC
Q ss_conf             54444678864111379999866678111114-9999604688899999999909999998558999-984100001258
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-ALDTGKLKNLLD  755 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~~~~~ld  755 (888)
                      .....          ....||+.|+|||++.. ..|+.++|||||||+||+|+||++||........ .+...     ..
T Consensus       158 ~~~~~----------~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~-----~~  222 (364)
T d1omwa3         158 SKKKP----------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TL  222 (364)
T ss_dssp             SSSCC----------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH-----SS
T ss_pred             CCCCC----------CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-----CC
T ss_conf             78864----------3311345542168760389998441046778999999859998888998999999986-----04


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH----HHHHH
Q ss_conf             77899993569999999999850097999996----99999
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL----GKDVW  792 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~----~~~v~  792 (888)
                      .....+|...++.+.+|+.+||+.+|.+||+.    +++++
T Consensus       223 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil  263 (364)
T d1omwa3         223 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  263 (364)
T ss_dssp             SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
T ss_conf             68887887789999999999856698880887435799997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=353.14  Aligned_cols=263  Identities=24%  Similarity=0.344  Sum_probs=207.1

Q ss_pred             CHHHHHHHCCCCCCCCEEEECCCEEEEEEEECC-------EEEEEEEECCCCCC-CHHHHHHHHHHHHHC-CCCCEEEEE
Q ss_conf             766662102897754114100866899999879-------08999993589999-903799999999825-999700130
Q 002719          519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLV  589 (888)
Q Consensus       519 ~~~ei~~~~~~y~~~~~LG~G~fG~Vy~g~~~~-------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L-~HpnIv~l~  589 (888)
                      ..++++...++|.+.++||+|+||.||+|.+.+       +.||||++...... ....+.+|..++.++ +|+||+.++
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             98252616799798449841678399999986777555783999999860017178999999999988614998499741


Q ss_pred             CCCC---CCEEEEEEECCCCCHHHHHHCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf             5347---71289997348999444310269-------------9999998889999999999999985239996020331
Q 002719          590 GACP---EVWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL  653 (888)
Q Consensus       590 g~~~---~~~~lV~Ey~~~gsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDL  653 (888)
                      +++.   ...++||||+++|+|.+++....             ....+++..+..++.|++.||.|||+   ++|+||||
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDl  160 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL  160 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred             EEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCC
T ss_conf             154047975799998458992999998536666653222023321468999999999999999998873---79717867


Q ss_pred             CCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-C
Q ss_conf             579089847992000044321024544446788641113799998666781111149999604688899999999909-9
Q 002719          654 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-R  732 (888)
Q Consensus       654 Kp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG-~  732 (888)
                      ||+|||++.++.+||+|||+|+..........      .+...||+.|+|||++.++.++.++|||||||++|||+|| .
T Consensus       161 Kp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~------~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~  234 (299)
T d1ywna1         161 AARNILLSEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA  234 (299)
T ss_dssp             CGGGEEECGGGCEEECC------CCSCTTSCC------TTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCEEECCCCCEEECCCCCHHHCCCCCCCCC------CCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCC
T ss_conf             73106577998289845752001135665222------475166721020368646889966322136789999986889


Q ss_pred             CCCCCCHHH---HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             999985589---9998410000125877899993569999999999850097999996999999730000
Q 002719          733 PALGITKEV---QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       733 ~Pf~~~~~~---~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      +||......   ...+..+.        ....|...++.+.+|+.+||+.+|.+||++ .++++.|+.+.
T Consensus       235 ~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-~eil~~L~~il  295 (299)
T d1ywna1         235 SPYPGVKIDEEFCRRLKEGT--------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNLL  295 (299)
T ss_dssp             CSSTTCCCSHHHHHHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHCCC--------CCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             99989998999999996389--------888886578999999999767796679199-99999997998

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=0  Score=351.54  Aligned_cols=240  Identities=22%  Similarity=0.297  Sum_probs=199.9

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEE
Q ss_conf             89775411410086689999987--908999993589---9999037999999998259997001305347--7128999
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY  600 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~  600 (888)
                      ++|++.+.||+|+||.||+|...  +..||||++...   .......+.+|+.+|+.++|||||++++++.  ...++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
T ss_conf             37089889611768089999998999899999982677458899999999999999748772740344443222223222


Q ss_pred             EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf             73489994443102699999998889999999999999985239996020331579089847992000044321024544
Q 002719          601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       601 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~  680 (888)
                      ||+.+|+|..++...   ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus       121 e~~~~g~l~~~l~~~---~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             CCCCCCCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHCCCCCCCCEEEEECEEEEECCCC
T ss_conf             233466226667515---898999999999999998999985---99861767999936077897886101033322566


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990999999855899998410000125877899
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      .           ....||+.|+|||++.+..|+.++|||||||+||+|+||++||...+............       ..
T Consensus       195 ~-----------~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~-------~~  256 (350)
T d1rdqe_         195 T-----------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-------VR  256 (350)
T ss_dssp             B-----------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-------CC
T ss_pred             C-----------CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-------CC
T ss_conf             6-----------43367635678899717998853311450078999975889989959999999986179-------88


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCC-----CHHHHHH
Q ss_conf             9935699999999998500979999-----9699999
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRP-----ELGKDVW  792 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RP-----s~~~~v~  792 (888)
                      .|...+..+.+|+.+||..+|.+|+     ++ ++++
T Consensus       257 ~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~-~ell  292 (350)
T d1rdqe_         257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGV-NDIK  292 (350)
T ss_dssp             CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTT-HHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCH-HHHH
T ss_conf             97668999999999983409986065534549-9997

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=350.69  Aligned_cols=254  Identities=26%  Similarity=0.414  Sum_probs=207.1

Q ss_pred             CCCCCCCEEEECCCEEEEEEEECC--E--EEEEEEECCC-CCCCHHHHHHHHHHHHHC-CCCCEEEEECCCC--CCEEEE
Q ss_conf             897754114100866899999879--0--8999993589-999903799999999825-9997001305347--712899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRH--M--QVAIKMLHPH-SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~~--~--~VAIK~l~~~-~~~~~~~~~~Ei~iL~~L-~HpnIv~l~g~~~--~~~~lV  599 (888)
                      ++|++.+.||+|+||.||+|.+.+  .  .||||.+... .......|.+|+.+|+++ +|||||+++|+|.  +..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEE
T ss_conf             99688779820788289999998999699999999782338579999999999998622899883678888418736999


Q ss_pred             EEECCCCCHHHHHHCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf             9734899944431026-------------999999988899999999999999852399960203315790898479920
Q 002719          600 YEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS  666 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~-------------~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~v  666 (888)
                      |||+++|+|.++|...             .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCEEEECCCCCE
T ss_conf             98028986999986403555551231012345789999999999999999876630---895455505204898688763


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHH
Q ss_conf             000443210245444467886411137999986667811111499996046888999999999099-9999855899998
Q 002719          667 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYAL  745 (888)
Q Consensus       667 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~-~Pf~~~~~~~~~~  745 (888)
                      ||+|||+|+........         ....||..|+|||.+.++.++.++|||||||++|||++|. +||...+......
T Consensus       167 kl~DfG~a~~~~~~~~~---------~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~  237 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKK---------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE  237 (309)
T ss_dssp             EECCTTCEESSCEECCC-------------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             EECCCCCCCCCCCCCCC---------CCEECCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf             87434432244422345---------530137755553875269999622153138899999836899999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             4100001258778999935699999999998500979999969999997300000
Q 002719          746 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       746 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      ...      .......|...++.+.+|+.+||+.+|++||++ .++++.|+.+..
T Consensus       238 ~i~------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-~eil~~L~~i~~  285 (309)
T d1fvra_         238 KLP------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRMLE  285 (309)
T ss_dssp             HGG------GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred             HHH------HCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHH
T ss_conf             998------268888876678999999999767896689499-999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=354.82  Aligned_cols=250  Identities=26%  Similarity=0.427  Sum_probs=208.0

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC---CCEEEEEEEC
Q ss_conf             2897754114100866899999879089999935899999037999999998259997001305347---7128999734
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYL  603 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~---~~~~lV~Ey~  603 (888)
                      .++|++.+.||+|+||.||+|.+.+..||||+++..  ...+.|.+|+.++++++||||++++|+|.   +..++||||+
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHHEEEEEEEECCCCEEEEEEEECCEEEEEEEECCH--HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECC
T ss_conf             899488579820798089999999909999998857--779999999999986789898549878872389289999636


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      ++|+|.+++.... ...+++..++.|+.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......  
T Consensus        84 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~--  157 (262)
T d1byga_          84 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  157 (262)
T ss_dssp             TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCHHHHHHHCC-CCCCCHHHHHHHHHHHHHHCCCCCC---CCEECCCCCHHHHEECCCCCEEECCCCCCEECCCCC--
T ss_conf             9998999987457-8888999999999999852321133---765536665676014689977632456003447877--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             78864111379999866678111114999960468889999999990-99999985589999841000012587789999
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP  762 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p  762 (888)
                               ....++..|+|||++.++.++.++|||||||++|||+| |++||......+.....      ......+.|
T Consensus       158 ---------~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i------~~~~~~~~~  222 (262)
T d1byga_         158 ---------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV------EKGYKMDAP  222 (262)
T ss_dssp             -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH------TTTCCCCCC
T ss_pred             ---------CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH------HCCCCCCCC
T ss_conf             ---------65566646778178727988858877757999999997899999999999999999------808999997


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             35699999999998500979999969999997300000
Q 002719          763 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       763 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      ...+..+.+|+.+||..+|.+||++ .++.+.|+.++.
T Consensus       223 ~~~~~~~~~li~~cl~~dP~~Rps~-~~l~~~L~~i~~  259 (262)
T d1byga_         223 DGCPPAVYEVMKNCWHLDAAMRPSF-LQLREQLEHIKT  259 (262)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHH
T ss_conf             6579999999999756697689399-999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=348.09  Aligned_cols=262  Identities=24%  Similarity=0.357  Sum_probs=209.5

Q ss_pred             HHHHCCCCCCCCEEEECCCEEEEEEEEC-------CEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCC-
Q ss_conf             6210289775411410086689999987-------908999993589999-9037999999998259997001305347-
Q 002719          523 IEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-  593 (888)
Q Consensus       523 i~~~~~~y~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-  593 (888)
                      ++...++|.+.++||+|+||+||+|.+.       +..||||+++..... ....|.+|+.++++++||||++++|+|. 
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~   94 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   94 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred             EEECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
T ss_conf             04268991883598207881899999878644778968999998701286899999999999997699988412547842


Q ss_pred             -CCEEEEEEECCCCCHHHHHHCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCC
Q ss_conf             -7128999734899944431026-------99999998889999999999999985239996020331579089847992
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCK-------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV  665 (888)
Q Consensus       594 -~~~~lV~Ey~~~gsL~~~L~~~-------~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~  665 (888)
                       +..++||||+++|+|.+++...       .....+++..+..++.+++.||.|||.   ++|+||||||+|||++.++.
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~  171 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFT  171 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCC
T ss_pred             CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECEECCCCEEECCCCE
T ss_conf             881067776048998899987503321134446887999999999999999998764---79654328677540359964


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHH
Q ss_conf             000044321024544446788641113799998666781111149999604688899999999909-9999985589999
Q 002719          666 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYA  744 (888)
Q Consensus       666 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG-~~Pf~~~~~~~~~  744 (888)
                      +||+|||+|+.+......      .......||+.|+|||.+.++.++.++||||||+++|||+|| .+||......+..
T Consensus       172 ~Kl~DFGla~~~~~~~~~------~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~  245 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL  245 (308)
T ss_dssp             EEECCTTCCCGGGGGGCE------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH
T ss_pred             EEEEECCCCEECCCCCCE------EECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             999424542023577630------31340231632378888736998833344437899999996899999998999999


Q ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             84100001258778999935699999999998500979999969999997300000
Q 002719          745 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       745 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      ...      .+......|...+..+.+|+.+||+.+|.+||++ +++++.|+....
T Consensus       246 ~~i------~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-~~il~~L~~~~~  294 (308)
T d1p4oa_         246 RFV------MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIKEEME  294 (308)
T ss_dssp             HHH------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHGGGSC
T ss_pred             HHH------HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHCC
T ss_conf             999------8088888863353999999999757796589399-999999787617

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=0  Score=347.50  Aligned_cols=259  Identities=24%  Similarity=0.383  Sum_probs=208.4

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC---HHHHHHHHHHHHHCCCCCEEEEECCCCC------C
Q ss_conf             289775411410086689999987--9089999935899999---0379999999982599970013053477------1
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------V  595 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~L~HpnIv~l~g~~~~------~  595 (888)
                      .++|.+.+.||+|+||.||+|...  ++.||||++.......   ...|.+|+.+|+.++||||+++++++..      .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCE
T ss_conf             62069868996089929999999999989999998556646989999999999999856999887311435432688766


Q ss_pred             EEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             28999734899944431026999999988899999999999999852399960203315790898479920000443210
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~  675 (888)
                      .|+||||++||+|.+++...   .++++..+..++.|++.||.|||+   +||+||||||+|||++.++..+|+|||++.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~---~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEEHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
T ss_conf             99999778898710112035---899999999999999999999985---795276346755665754320100344432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             24544446788641113799998666781111149999604688899999999909999998558999984100001258
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD  755 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld  755 (888)
                      ..........     ......||+.|+|||++.+..++.++|||||||++|+|+||++||................... 
T Consensus       160 ~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~-  233 (277)
T d1o6ya_         160 AIADSGNSVT-----QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-  233 (277)
T ss_dssp             ECC---------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-
T ss_pred             HHCCCCCCCC-----CCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC-
T ss_conf             2123544333-----3464257624369999839999966320265289999976979989969999999998469999-


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             77899993569999999999850097999996999999730000
Q 002719          756 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       756 ~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      +  ...+...+..+.+|+.+||+.+|.+||+..+++...|..++
T Consensus       234 ~--~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 P--SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             G--GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             C--CHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHH
T ss_conf             7--10034789999999999866797677739999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=347.38  Aligned_cols=260  Identities=25%  Similarity=0.387  Sum_probs=211.5

Q ss_pred             HCCCCCCCCEEEECCCEEEEEEEECC---------EEEEEEEECCCCCC-CHHHHHHHHHHHHHC-CCCCEEEEECCCC-
Q ss_conf             02897754114100866899999879---------08999993589999-903799999999825-9997001305347-
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP-  593 (888)
Q Consensus       526 ~~~~y~~~~~LG~G~fG~Vy~g~~~~---------~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L-~HpnIv~l~g~~~-  593 (888)
                      ..++|.+.+.||+|+||.||+|...+         ..||||+++..... ....+.+|+..+.++ +|||||+++|+|. 
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             58996970098516782899999857875556675499999988112868899999999999981399969734652201


Q ss_pred             -CCEEEEEEECCCCCHHHHHHCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEE
Q ss_conf             -71289997348999444310269-------------9999998889999999999999985239996020331579089
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL  659 (888)
Q Consensus       594 -~~~~lV~Ey~~~gsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NIL  659 (888)
                       ...++||||+++|+|.+++....             ....+++..++.++.|++.||.|||+   ++|+||||||+|||
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiL  167 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  167 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEEECCCCEE
T ss_conf             886899997369990999998606776432223345743467999999999999999987663---79786302210224


Q ss_pred             ECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCC
Q ss_conf             84799200004432102454444678864111379999866678111114999960468889999999990-99999985
Q 002719          660 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT  738 (888)
Q Consensus       660 ld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~  738 (888)
                      ++.++.+||+|||+++..........      .....||+.|+|||++.++.|+.++|||||||++|||++ |.+||...
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~  241 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKK------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  241 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCC------CTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ECCCCCEEECCCHHHCCCCCCCCCCC------CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             54789767622111011355555431------466788846632667517988825554775888887401798989999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             589999841000012587789999356999999999985009799999699999973000003
Q 002719          739 KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       739 ~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~~  801 (888)
                      ........      +........|...+..+.+|+.+||+.+|.+||++ .++++.|+.+.+.
T Consensus       242 ~~~~~~~~------i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~-~eil~~L~~i~a~  297 (299)
T d1fgka_         242 PVEELFKL------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRIVAL  297 (299)
T ss_dssp             CHHHHHHH------HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred             CHHHHHHH------HHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHHC
T ss_conf             99999999------97288889874352999999999766797679399-9999999888604

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=345.87  Aligned_cols=243  Identities=25%  Similarity=0.312  Sum_probs=199.6

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCC---CCCCHHHHHHHHHHHH-HCCCCCEEEEECCCC--CCEEEE
Q ss_conf             89775411410086689999987--908999993589---9999037999999998-259997001305347--712899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILS-KIRHPNLVTLVGACP--EVWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~---~~~~~~~~~~Ei~iL~-~L~HpnIv~l~g~~~--~~~~lV  599 (888)
                      ++|.+.+.||+|+||+||+|...  +..||||++.+.   .......+..|..++. .++||||+++++++.  +..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEE
T ss_conf             97188658940878289999999999899999980555338489999999999999847999687898897049831677


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCC
Q ss_conf             97348999444310269999999888999999999999998523999602033157908984799200004432102454
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ  679 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~  679 (888)
                      |||+++|+|.+++...   ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus        82 mEy~~~g~L~~~i~~~---~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEECCCCCHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCCEEECCCCCEECCCCCHHHHCCC
T ss_conf             7503798089986404---789999999999999999999986---8934034765404444899630155530232356


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             44467886411137999986667811111499996046888999999999099999985589999841000012587789
Q 002719          680 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG  759 (888)
Q Consensus       680 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~  759 (888)
                      ....        .+...||+.|+|||++.+..|+.++|||||||++|+|+||++||.+.+...........       ..
T Consensus       156 ~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-------~~  220 (320)
T d1xjda_         156 GDAK--------TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-------NP  220 (320)
T ss_dssp             TTCC--------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------CC
T ss_pred             CCCC--------CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-------CC
T ss_conf             6533--------45457877768999982799883232011227898987388999998999999999718-------99


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             99935699999999998500979999969999
Q 002719          760 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       760 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      .+|...+..+.+|+.+||..+|.+||++..++
T Consensus       221 ~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l  252 (320)
T d1xjda_         221 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  252 (320)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             89756799999999996544898783889999

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=350.52  Aligned_cols=256  Identities=26%  Similarity=0.381  Sum_probs=207.2

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEECC-----EEEEEEEECCCCCCC---HHHHHHHHHHHHHCCCCCEEEEECCCCC-CEE
Q ss_conf             2897754114100866899999879-----089999935899999---0379999999982599970013053477-128
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE-VWT  597 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~~-----~~VAIK~l~~~~~~~---~~~~~~Ei~iL~~L~HpnIv~l~g~~~~-~~~  597 (888)
                      ..+|++.+.||+|+||.||+|.+..     ..||||++.......   .+.|.+|+.+|++++||||++++|+|.+ ..+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~   86 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   86 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             HHHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHH
T ss_conf             48919978980388839999999889990799999999835557989999999999999868999987898777401001


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf             99973489994443102699999998889999999999999985239996020331579089847992000044321024
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~  677 (888)
                      +||||+++|+|.+++...  ..++++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+
T Consensus        87 lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEECCCCHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEEECHHHHCCCCCCCEEECCCHHHHHC
T ss_conf             146542386125444212--6899999999999999999987521---78752056688815655654332561155530


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             54444678864111379999866678111114999960468889999999990-99999985589999841000012587
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDP  756 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ld~  756 (888)
                      ........     ......|+..|+|||++.+..++.++|||||||++|||+| |++||...+.........+..     
T Consensus       162 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~-----  231 (273)
T d1u46a_         162 PQNDDHYV-----MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG-----  231 (273)
T ss_dssp             CC-CCEEE-----C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-----
T ss_pred             CCCCCCCE-----ECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC-----
T ss_conf             35887526-----54763257310799998379999421566148999999968999999969999999998479-----


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
Q ss_conf             789999356999999999985009799999699999973000
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM  798 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l  798 (888)
                      ...+.+...+..+.+|+.+||..+|++||++ .++.+.|...
T Consensus       232 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~-~ei~~~L~~~  272 (273)
T d1u46a_         232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF-VALRDFLLEA  272 (273)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHC
T ss_conf             9999854453999999999768896679299-9999999964

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=344.82  Aligned_cols=248  Identities=20%  Similarity=0.297  Sum_probs=199.2

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEE
Q ss_conf             289775411410086689999987--908999993589999903799999999825999700130534--7712899973
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey  602 (888)
                      .++|.+.+.||+|+||+||+|...  +..||||++.... .....+.+|+.+|+.++|||||++++++  ....|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEC
T ss_conf             010588789831778399999998999699999975786-6599999999999857997989098999889988999953


Q ss_pred             CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC--CCCEEEECCCCCCCCCCC
Q ss_conf             489994443102699999998889999999999999985239996020331579089847--992000044321024544
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA--NFVSKLSDFGISRFLSQN  680 (888)
Q Consensus       603 ~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~--~~~vKL~DFGla~~~~~~  680 (888)
                      ++||+|.+++..  ....+++..+..|+.||+.||.|||+   +||+||||||+|||++.  ...+||+|||+++.....
T Consensus        83 ~~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCC
T ss_conf             899808899875--38999999999999999999999987---6997513554443443788518997644111003467


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             44678864111379999866678111114999960468889999999990999999855899998410000125877899
Q 002719          681 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD  760 (888)
Q Consensus       681 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~  760 (888)
                      ...         ....||+.|+|||.+.+..|+.++|||||||++|+|++|.+||..................++.   .
T Consensus       158 ~~~---------~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~  225 (321)
T d1tkia_         158 DNF---------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE---E  225 (321)
T ss_dssp             CEE---------EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCH---H
T ss_pred             CCC---------CCCCCCCCCCCCHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCH---H
T ss_conf             753---------2122332223402104877784011302799999998289999998999999999838999880---2


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             993569999999999850097999996999999
Q 002719          761 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       761 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~  793 (888)
                      .+...+..+.+|+.+||..+|.+||++ ++++.
T Consensus       226 ~~~~~s~~~~~li~~~L~~dp~~R~s~-~eil~  257 (321)
T d1tkia_         226 AFKEISIEAMDFVDRLLVKERKSRMTA-SEALQ  257 (321)
T ss_dssp             HHTTSCHHHHHHHHTTSCSSGGGSCCH-HHHHH
T ss_pred             HCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHC
T ss_conf             236789999999999866996689099-99963

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=345.04  Aligned_cols=247  Identities=21%  Similarity=0.342  Sum_probs=193.4

Q ss_pred             CCCCCCCC-EEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHC-CCCCEEEEECCCC------CCE
Q ss_conf             28977541-1410086689999987--908999993589999903799999999825-9997001305347------712
Q 002719          527 THNFDPSL-KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP------EVW  596 (888)
Q Consensus       527 ~~~y~~~~-~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L-~HpnIv~l~g~~~------~~~  596 (888)
                      .++|.+.. .||+|+||.||+|...  +..||||++..     ...+.+|+.++.++ +|||||++++++.      ...
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             CCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECC-----CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEE
T ss_conf             14879810796545486999999889998999999897-----4779999999998669999782989995034689789


Q ss_pred             EEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC---CCCEEEECCCC
Q ss_conf             899973489994443102699999998889999999999999985239996020331579089847---99200004432
Q 002719          597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFGI  673 (888)
Q Consensus       597 ~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~---~~~vKL~DFGl  673 (888)
                      |+|||||+||+|.+++... ....|++..+..|+.|++.||.|||+   +||+||||||+|||++.   .+.+||+|||+
T Consensus        85 ~ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEECCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             9999778998499999862-78775799999999999999999997---6986444100220113555566311354551


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH--HHHCCCC
Q ss_conf             10245444467886411137999986667811111499996046888999999999099999985589999--8410000
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLK  751 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~  751 (888)
                      |+........         ....||+.|+|||++.+..|+.++|||||||+||+|+||++||.........  +......
T Consensus       161 a~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~  231 (335)
T d2ozaa1         161 AKETTSHNSL---------TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  231 (335)
T ss_dssp             CEECCCCCCC---------CCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCS
T ss_pred             EEECCCCCCC---------CCCCCCCCCCCCHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             2333688864---------3226775637927774898888888876451677886588998898877889999999853


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             125877899993569999999999850097999996999999
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~  793 (888)
                      .... .........+..+.+|+.+||+.+|.+||++ .+++.
T Consensus       232 ~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-~eil~  271 (335)
T d2ozaa1         232 GQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI-TEFMN  271 (335)
T ss_dssp             CSSS-CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred             CCCC-CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHC
T ss_conf             8888-8985434699999999999756996579099-99970

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=338.17  Aligned_cols=245  Identities=26%  Similarity=0.284  Sum_probs=192.1

Q ss_pred             CCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC-----HHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEEEC
Q ss_conf             411410086689999987--9089999935899999-----037999999998259997001305347--7128999734
Q 002719          533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-----PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL  603 (888)
Q Consensus       533 ~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~-----~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~Ey~  603 (888)
                      .++||+|+||+||+|...  +..||||++.......     ...+.+|+.+|+.++|||||++++++.  +..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             CEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHH
T ss_conf             63851272829999999999969999998420212456799999999999998679999868985422587402204553


Q ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             89994443102699999998889999999999999985239996020331579089847992000044321024544446
Q 002719          604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS  683 (888)
Q Consensus       604 ~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~  683 (888)
                      .++++..++   .....+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+|+........
T Consensus        83 ~~~~~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          83 ETDLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             SEEHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             CCHHHHHHH---HCCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             450776554---126677899999999999999988631---63550357762588537784114657610005787554


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC------CC
Q ss_conf             788641113799998666781111149-99960468889999999990999999855899998410000125------87
Q 002719          684 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL------DP  756 (888)
Q Consensus       684 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l------d~  756 (888)
                      .        ....||+.|+|||++... .|+.++|||||||++|+|+||.+||......+............      +.
T Consensus       157 ~--------~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         157 Y--------THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             C--------CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             C--------CCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCH
T ss_conf             3--------30204733363999726778880564363042899998596999999999999999985189972545210


Q ss_pred             ----------CCCCCC-----HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ----------789999-----356999999999985009799999699999
Q 002719          757 ----------LAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       757 ----------~~~~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                .....+     ...+..+.+|+.+||+.+|.+||++ ++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa-~e~L  278 (299)
T d1ua2a_         229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA-TQAL  278 (299)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH-HHHH
T ss_pred             HCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             0021344303478988678565689999999999763894569089-9996

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=341.13  Aligned_cols=258  Identities=24%  Similarity=0.390  Sum_probs=207.3

Q ss_pred             HHHCCCCCCCCEEEECCCEEEEEEEEC-------CEEEEEEEECCCCCC-CHHHHHHHHHHHHHC-CCCCEEEEECCCC-
Q ss_conf             210289775411410086689999987-------908999993589999-903799999999825-9997001305347-
Q 002719          524 EGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP-  593 (888)
Q Consensus       524 ~~~~~~y~~~~~LG~G~fG~Vy~g~~~-------~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L-~HpnIv~l~g~~~-  593 (888)
                      +...++|++.++||+|+||.||+|.+.       +..||||+++..... ....|.+|+.+++.+ +|||||+++|+|. 
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~   98 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE
T ss_conf             37789969854982068829999998066447788699999987424877999999999998762699988789989831


Q ss_pred             -CCEEEEEEECCCCCHHHHHHCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
Q ss_conf             -71289997348999444310269---------------99999988899999999999999852399960203315790
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKD---------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN  657 (888)
Q Consensus       594 -~~~~lV~Ey~~~gsL~~~L~~~~---------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~N  657 (888)
                       ...++||||+++|+|.+++....               ....+++..+..++.||+.||.|||+   ++++||||||+|
T Consensus        99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~N  175 (311)
T d1t46a_          99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARN  175 (311)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCC
T ss_conf             99789999737998799999853566544444533222334588999999999999999998875---792666241021


Q ss_pred             EEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCC
Q ss_conf             8984799200004432102454444678864111379999866678111114999960468889999999990-999999
Q 002719          658 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG  736 (888)
Q Consensus       658 ILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~ellt-G~~Pf~  736 (888)
                      ||++.++.+||+|||+++.........      ..+...||+.|+|||++.++.++.++|||||||++|||+| |.+||.
T Consensus       176 Il~~~~~~~ki~DfG~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~  249 (311)
T d1t46a_         176 ILLTHGRITKICDFGLARDIKNDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP  249 (311)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSE------ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             CCCCCCCCCCCCCCCHHEECCCCCCCE------EEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             000025752102340102336788615------86201359687677886179999740010258999999858998877


Q ss_pred             CCHHH---HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             85589---9998410000125877899993569999999999850097999996999999730000
Q 002719          737 ITKEV---QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       737 ~~~~~---~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      .....   ...+..+        .....|...+..+.+|+.+||+.+|.+||++ .++++.|+...
T Consensus       250 ~~~~~~~~~~~i~~~--------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~-~~il~~L~~~i  306 (311)
T d1t46a_         250 GMPVDSKFYKMIKEG--------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTF-KQIVQLIEKQI  306 (311)
T ss_dssp             TCCSSHHHHHHHHHT--------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCC--------CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             899899999998668--------9889854365999999999757796579299-99999998765

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=0  Score=337.34  Aligned_cols=245  Identities=27%  Similarity=0.387  Sum_probs=198.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC---------HHHHHHHHHHHHHCC-CCCEEEEECCCC--
Q ss_conf             89775411410086689999987--9089999935899999---------037999999998259-997001305347--
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---------PSEFQQEIDILSKIR-HPNLVTLVGACP--  593 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~---------~~~~~~Ei~iL~~L~-HpnIv~l~g~~~--  593 (888)
                      ++|++.+.||+|+||+||++...  ++.||||++.......         .+.+.+|+.++++++ ||||+++++++.  
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             CCCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf             63888528841768499999999999899999996244641147888999999999999999850799747997621467


Q ss_pred             CCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCC
Q ss_conf             71289997348999444310269999999888999999999999998523999602033157908984799200004432
Q 002719          594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI  673 (888)
Q Consensus       594 ~~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGl  673 (888)
                      +..|+||||+++|+|.+++...   .++++..+..++.||+.||.|||.   ++|+||||||+|||++.++.+||+|||+
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCEEEEEECCCCCHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCHH
T ss_conf             6059999768986689999865---999999999999999999999987---5994323462548986899838712403


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf             102454444678864111379999866678111114------99996046888999999999099999985589999841
Q 002719          674 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT  747 (888)
Q Consensus       674 a~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~  747 (888)
                      ++.+......         +...||+.|+|||++.+      ..++.++||||+||+||+|++|++||............
T Consensus       157 a~~~~~~~~~---------~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i  227 (277)
T d1phka_         157 SCQLDPGEKL---------REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI  227 (277)
T ss_dssp             CEECCTTCCB---------CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EEECCCCCCE---------EEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             1672688721---------3452467888988860534456788992331856560231032288898899999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             00001258778999935699999999998500979999969999
Q 002719          748 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       748 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                      ....  .. .........++++.+|+.+||+.+|.+||++ +++
T Consensus       228 ~~~~--~~-~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~-~ei  267 (277)
T d1phka_         228 MSGN--YQ-FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-EEA  267 (277)
T ss_dssp             HHTC--CC-CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH-HHH
T ss_pred             HHCC--CC-CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             8189--88-8985434689999999999765896689199-999

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=345.09  Aligned_cols=262  Identities=22%  Similarity=0.334  Sum_probs=197.1

Q ss_pred             CCCCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHH--HHHHCCCCCEEEEECCCCC------CEEEE
Q ss_conf             897754114100866899999879089999935899999037999999--9982599970013053477------12899
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEID--ILSKIRHPNLVTLVGACPE------VWTLV  599 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~--iL~~L~HpnIv~l~g~~~~------~~~lV  599 (888)
                      .+|.+.+.||+|+||.||+|.+++..||||++....   ...+.+|.+  .+..++|||||+++|+|.+      ..++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             CEEEEEEEEEECCCEEEEEEEECCEEEEEEEECCCC---HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
T ss_conf             689998898207881999999999899999987200---46799999999996279986832688998379860489999


Q ss_pred             EEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-----CCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf             97348999444310269999999888999999999999998523-----9996020331579089847992000044321
Q 002719          600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC-----KPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       600 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~-----~~~gIiHrDLKp~NILld~~~~vKL~DFGla  674 (888)
                      |||+++|+|.+++..    ..++|..++.++.+++.||.|||..     +.++|+||||||+|||++.++.+||+|||++
T Consensus        80 ~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EECCCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCCC
T ss_conf             964669898999865----8999899999999999999998876652046898661531731357868877688763866


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC------CCCHHHHHHHHHHHHHHHHCCCCCCCCHHH-------
Q ss_conf             0245444467886411137999986667811111499------996046888999999999099999985589-------
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE------LTPKSDVYSFGIILLRLLTGRPALGITKEV-------  741 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~------~~~~sDVwSlGviL~elltG~~Pf~~~~~~-------  741 (888)
                      +..........    .......||+.|+|||++.+..      ++.++|||||||+||||+||.+||......       
T Consensus       156 ~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~  231 (303)
T d1vjya_         156 VRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             EEEETTTTEEC----C----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             CCCCCCCCCEE----CCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC
T ss_conf             23467776200----13552503547678221056545467776750122015999999962899887663112410122


Q ss_pred             ------HHHHHHCCCCCCCCCC-CCCC-CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             ------9998410000125877-8999-9356999999999985009799999699999973000003
Q 002719          742 ------QYALDTGKLKNLLDPL-AGDW-PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS  801 (888)
Q Consensus       742 ------~~~~~~~~~~~~ld~~-~~~~-p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~~  801 (888)
                            ............+.|. ...+ +......+.+|+.+||+.+|.+||++ .+|.+.|+.+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-~ei~~~L~~i~~~  298 (303)
T d1vjya_         232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHHHH
T ss_conf             556430999999875024688877655776899999999999760698589599-9999999988886

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=332.44  Aligned_cols=251  Identities=26%  Similarity=0.359  Sum_probs=195.0

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCC--CCHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEE
Q ss_conf             89775411410086689999987--90899999358999--99037999999998259997001305347--71289997
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~E  601 (888)
                      ++|.+.+.||+|+||+||+|...  ++.||||++.....  .....+.+|+.+|++++|||||++++++.  ...|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEE
T ss_conf             99776517723768099999999999799999980222575899999999999986799838874453322432037886


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             34899944431026999999988899999999999999852399960203315790898479920000443210245444
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~  681 (888)
                      |+.++ +.+++... ....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+......
T Consensus        82 ~~~~~-~~~~~~~~-~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          82 FLHQD-LKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             CCSEE-HHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ECCCC-HHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCCHHEEECCCCCCEECCCCCCEECCCCC
T ss_conf             23774-45554420-25688889999999999999998652---889921357114011346762103578613436886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC-----
Q ss_conf             467886411137999986667811111499-99604688899999999909999998558999984100001258-----
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-----  755 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~ld-----  755 (888)
                      ..        .....||+.|+|||++.... ++.++|||||||++|+|++|++||...+...............+     
T Consensus       157 ~~--------~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         157 RT--------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             BC--------TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             CC--------CEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCC
T ss_conf             41--------0010365215411221366577742210333313427966879989889999999999832898333144


Q ss_pred             ------CCCCCC-----------CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ------778999-----------9356999999999985009799999699999
Q 002719          756 ------PLAGDW-----------PFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       756 ------~~~~~~-----------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                            .....+           ....+..+.+|+.+||..+|.+||++ ++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~-~ell  281 (298)
T d1gz8a_         229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA-KAAL  281 (298)
T ss_dssp             TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             4222421243454322220444166789999999999763995579189-9996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=331.75  Aligned_cols=251  Identities=25%  Similarity=0.339  Sum_probs=195.3

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC---CEEEEEEEECCCC--CCCHHHHHHHHHHHHHC---CCCCEEEEECCCC-----
Q ss_conf             289775411410086689999987---9089999935899--99903799999999825---9997001305347-----
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS--LQGPSEFQQEIDILSKI---RHPNLVTLVGACP-----  593 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~---~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~L---~HpnIv~l~g~~~-----  593 (888)
                      .++|++.++||+|+||+||+|...   +..||||++....  ......+.+|+.+|+.|   +||||++++++|.     
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             CCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf             58979888992155869999999888998999999802324516799999999999987425898802366322146666


Q ss_pred             --CCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECC
Q ss_conf             --712899973489994443102699999998889999999999999985239996020331579089847992000044
Q 002719          594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF  671 (888)
Q Consensus       594 --~~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DF  671 (888)
                        ...+++|||+.++++.....  .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             CCCEEEEEEEECCCCCHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCEEEECCCCCEEECCH
T ss_conf             6746999997405871444443--037899989999999999999999975---88983579862789858997542100


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             32102454444678864111379999866678111114999960468889999999990999999855899998410000
Q 002719          672 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       672 Gla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      |++........         .....||+.|+|||++.+..|+.++||||+||++|+|+||++||...+............
T Consensus       161 g~~~~~~~~~~---------~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  231 (305)
T d1blxa_         161 GLARIYSFQMA---------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI  231 (305)
T ss_dssp             CSCCCCCGGGG---------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCC---------CCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             01011002345---------777654851148310017988811100032899999987879989989899999999840


Q ss_pred             --------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             --------------------12587789999356999999999985009799999699999
Q 002719          752 --------------------NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 --------------------~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                          .........++...+..+.+|+.+||+.+|.+||++ .+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa-~e~L  291 (305)
T d1blxa_         232 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA-YSAL  291 (305)
T ss_dssp             CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred             CCCCHHCCCCCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             79961105321111033302234564544044589999999999874896679189-9996

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=324.53  Aligned_cols=255  Identities=25%  Similarity=0.356  Sum_probs=196.8

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCC--CCHHHHHHHHHHHHHCCCCCEEEEECCCC---------
Q ss_conf             289775411410086689999987--90899999358999--99037999999998259997001305347---------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP---------  593 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~--~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~---------  593 (888)
                      .++|.+.++||+|+||+||+|...  +..||||++.....  .....+.+|+.+|+.++||||+++++++.         
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf             27988999972274829999999899979999998422246378999999999999835999660676540246544445


Q ss_pred             -CCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCC
Q ss_conf             -7128999734899944431026999999988899999999999999852399960203315790898479920000443
Q 002719          594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG  672 (888)
Q Consensus       594 -~~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFG  672 (888)
                       ...++||||+.++.+....   .....++...+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~---~~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT---CTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEECCCCCCCCHHH---HCCCCCCCHHHHHHHHHHHHHHHHHCC---CCEEECCCCCHHEEECCCCCEEEEECC
T ss_conf             76389998535787410122---203443308999999999999988522---998856767222036689968763135


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             21024544446788641113799998666781111149-99960468889999999990999999855899998410000
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      +++.+.........    ......||+.|+|||++.+. .|+.++|||||||++|+|++|++||................
T Consensus       163 ~~~~~~~~~~~~~~----~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~  238 (318)
T d3blha1         163 LARAFSLAKNSQPN----RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  238 (318)
T ss_dssp             TCEECCC-----CC----CCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCC----CCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf             00223554443211----35660249787428997079998917870067864661744879989989999999999841


Q ss_pred             CCCCCC-----------------CC-CCC-------HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             125877-----------------89-999-------356999999999985009799999699999
Q 002719          752 NLLDPL-----------------AG-DWP-------FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 ~~ld~~-----------------~~-~~p-------~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      ....+.                 .. ..+       ......+.+|+.+||+.+|++||++ ++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa-~elL  303 (318)
T d3blha1         239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS-DDAL  303 (318)
T ss_dssp             CCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred             CCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             8998255344320344433201334455503340444599899999999873896589099-9997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=327.69  Aligned_cols=247  Identities=26%  Similarity=0.326  Sum_probs=190.5

Q ss_pred             CCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--------CCEEE
Q ss_conf             9775411410086689999987--9089999935899999037999999998259997001305347--------71289
Q 002719          529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVWTL  598 (888)
Q Consensus       529 ~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--------~~~~l  598 (888)
                      +|...++||+|+||+||+|.+.  +..||||++.....    .+.+|+.+|++++||||++++++|.        .+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCH----HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf             76751698217683999999999997999999881606----89999999986689898738789974476577318999


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC-CEEEECCCCCCCC
Q ss_conf             997348999444310269999999888999999999999998523999602033157908984799-2000044321024
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFL  677 (888)
Q Consensus       599 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~-~vKL~DFGla~~~  677 (888)
                      ||||++++.+..+.........+++..+..++.|++.||.|||+   +||+||||||+|||++.++ .+||+|||++..+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEEECCCCCEEEECCCCHHHC
T ss_conf             98416886078888631036899999999999999999999986---687645788603787358971167336605440


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC------
Q ss_conf             54444678864111379999866678111114-99996046888999999999099999985589999841000------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------  750 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~------  750 (888)
                      ......         ....||..|+|||.+.+ ..|+.++||||+||++|||++|++||.............+.      
T Consensus       174 ~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~  244 (350)
T d1q5ka_         174 VRGEPN---------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR  244 (350)
T ss_dssp             CTTSCC---------CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCCCCC---------CCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf             477653---------20025555568277640468882100024652778550287998987999999999997489817


Q ss_pred             ----------CCCCCC------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ----------012587------789999356999999999985009799999699999
Q 002719          751 ----------KNLLDP------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       751 ----------~~~ld~------~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                ....-+      .........+..+.+|+.+||..||.+||++ .+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-~e~L  301 (350)
T d1q5ka_         245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP-LEAC  301 (350)
T ss_dssp             HHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred             HHHHHHCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             76543062101103554456744443156899999999999765895579299-9996

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=0  Score=326.66  Aligned_cols=250  Identities=23%  Similarity=0.291  Sum_probs=196.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC-CEEEEEEEECCCC--CCCHHHHHHHHHHHHHCCCCCEEEEECCC--CCCEEEEEEE
Q ss_conf             89775411410086689999987-9089999935899--99903799999999825999700130534--7712899973
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY  602 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~--~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~--~~~~~lV~Ey  602 (888)
                      ++|.+.++||+|+||+||+|.+. +..||||++....  ......+.+|+.+|+.++||||+++++++  ....++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCCEECCEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf             99634318722778189999968999999999812326858999999999999867998687660120467731589974


Q ss_pred             CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             48999444310269999999888999999999999998523999602033157908984799200004432102454444
Q 002719          603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI  682 (888)
Q Consensus       603 ~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~  682 (888)
                      +.++.+..+.   .....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|........
T Consensus        82 ~~~~~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          82 LDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             CSEEHHHHHH---TSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             EHHHHHHHHH---HHCCCCCHHHHHHHHHHHHHHHHHHCC---CCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCCC
T ss_conf             0045678998---604775144568999999999998605---7488267877505686899787323664301146765


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC---------
Q ss_conf             6788641113799998666781111149-999604688899999999909999998558999984100001---------
Q 002719          683 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN---------  752 (888)
Q Consensus       683 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~---------  752 (888)
                      ..        ....|++.|+|||.+.+. .++.++|||||||++|+|++|++||...+..+..........         
T Consensus       156 ~~--------~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  227 (286)
T d1ob3a_         156 KY--------THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN  227 (286)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             CC--------CEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC
T ss_conf             41--------0102431101378871788888410021117589999779799898898999999998638997110421


Q ss_pred             ------CCCCC-------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ------25877-------89999356999999999985009799999699999
Q 002719          753 ------LLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       753 ------~ld~~-------~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                            .....       ....+...+..+.+|+.+||+.||++||++ ++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-~ell  279 (286)
T d1ob3a_         228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA-KQAL  279 (286)
T ss_dssp             GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             233322143333356764666512589999999999866896689099-9985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=332.73  Aligned_cols=236  Identities=22%  Similarity=0.368  Sum_probs=191.7

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC------CHHHHHHHHHHHHHCC--CCCEEEEECCCC--C
Q ss_conf             289775411410086689999987--908999993589999------9037999999998259--997001305347--7
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIR--HPNLVTLVGACP--E  594 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~------~~~~~~~Ei~iL~~L~--HpnIv~l~g~~~--~  594 (888)
                      .++|.+.+.||+|+||.||+|...  +..||||++......      ....+.+|+.+|++++  ||||+++++++.  +
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
T ss_conf             88379967984087839999999999979999998568844334556799999999999974358988127999983099


Q ss_pred             CEEEEEEECCC-CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC-CCCEEEECCC
Q ss_conf             12899973489-994443102699999998889999999999999985239996020331579089847-9920000443
Q 002719          595 VWTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFG  672 (888)
Q Consensus       595 ~~~lV~Ey~~~-gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~-~~~vKL~DFG  672 (888)
                      ..++||||+.+ +++.+++..   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++. ++.+||+|||
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG  156 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG  156 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             EEEEEEEECCCCCHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEEECCCCEEEECCCC
T ss_conf             689999833686228999861---5899999999999999999999987---7975566761114774478848977546


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             2102454444678864111379999866678111114999-960468889999999990999999855899998410000
Q 002719          673 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK  751 (888)
Q Consensus       673 la~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~  751 (888)
                      +|+......          .+...||+.|+|||++.+..+ +.++|||||||+||+|+||++||........    +.  
T Consensus       157 ~a~~~~~~~----------~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~----~~--  220 (273)
T d1xwsa_         157 SGALLKDTV----------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR----GQ--  220 (273)
T ss_dssp             TCEECCSSC----------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH----CC--
T ss_pred             CCEECCCCC----------CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHH----CC--
T ss_conf             535324445----------56656587747999984899788653325540345367568899887367761----54--


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             12587789999356999999999985009799999699999
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                             ..++...+..+.+|+.+||..+|.+||++ ++++
T Consensus       221 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~-~eil  253 (273)
T d1xwsa_         221 -------VFFRQRVSSECQHLIRWCLALRPSDRPTF-EEIQ  253 (273)
T ss_dssp             -------CCCSSCCCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred             -------CCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             -------47787799999999999760897589399-9985

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=327.15  Aligned_cols=253  Identities=23%  Similarity=0.290  Sum_probs=194.8

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC-CHHHHHHHHHHHHHCCCCCEEEEECCCCC------CEE
Q ss_conf             289775411410086689999987--908999993589999-90379999999982599970013053477------128
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE------VWT  597 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~-~~~~~~~Ei~iL~~L~HpnIv~l~g~~~~------~~~  597 (888)
                      +.+|++..+||+|+||+||+|...  +..||||++...... ....+.+|+.+|+.++||||+++++++..      ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEE
T ss_conf             89859978994064809999999999949999998031095899999999999997689898858889950564554149


Q ss_pred             EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf             99973489994443102699999998889999999999999985239996020331579089847992000044321024
Q 002719          598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL  677 (888)
Q Consensus       598 lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~  677 (888)
                      ++++|+.+|+|.+++..    ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|...
T Consensus        87 ~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEECCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCCCEEEC
T ss_conf             99996259865664405----899999999999999999999997---89867778764378879997787545705650


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC--
Q ss_conf             54444678864111379999866678111114-999960468889999999990999999855899998410000125--
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL--  754 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l--  754 (888)
                      .........     .....||+.|+|||++.. ..++.++||||+||++|+|++|++||...................  
T Consensus       160 ~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~  234 (345)
T d1pmea_         160 DPDHDHTGF-----LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  234 (345)
T ss_dssp             CGGGCBCCT-----TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred             CCCCCCCEE-----ECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH
T ss_conf             477764101-----011026520003878604788874101004670133776697997888889999987652069975


Q ss_pred             -----------------CCCCCCCC-----HHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             -----------------87789999-----356999999999985009799999699999
Q 002719          755 -----------------DPLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       755 -----------------d~~~~~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                       .+.....+     ...+..+.+|+.+||+.||.+||++ ++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta-~e~L  293 (345)
T d1pmea_         235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV-EQAL  293 (345)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             6642343322220244677557787778378999999999999764895679089-9986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=324.39  Aligned_cols=247  Identities=21%  Similarity=0.292  Sum_probs=194.2

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCC--HHHHHHHHHHHHHCCCCCEEEEECCCCC--------
Q ss_conf             289775411410086689999987--9089999935899999--0379999999982599970013053477--------
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE--------  594 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~--~~~~~~Ei~iL~~L~HpnIv~l~g~~~~--------  594 (888)
                      .++|.+.++||+|+||+||+|...  +..||||++.......  ...+.+|+.+|+.++|||||+++++|..        
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
T ss_conf             77189988980177819999999999989999998522259699999999999998668987547999863576555541


Q ss_pred             CEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf             12899973489994443102699999998889999999999999985239996020331579089847992000044321
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla  674 (888)
                      ..++||||+ +++|.....    ...+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEEECC-CCCHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCHHHCCCCCCCCCCCCCCE
T ss_conf             599998405-521899987----4022699999999999999999873---78764566851111210012211343102


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC-
Q ss_conf             024544446788641113799998666781111149-999604688899999999909999998558999984100001-
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN-  752 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~-  752 (888)
                      +......           +...||+.|+|||++.+. .++.++||||+||++|+|++|++||...+............. 
T Consensus       169 ~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~  237 (346)
T d1cm8a_         169 RQADSEM-----------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT  237 (346)
T ss_dssp             EECCSSC-----------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             ECCCCCC-----------CCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             2068763-----------10245533358899817878996501030038999999786998889768999999850378


Q ss_pred             -------------------CCCCC-C---CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             -------------------25877-8---99993569999999999850097999996999999
Q 002719          753 -------------------LLDPL-A---GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR  793 (888)
Q Consensus       753 -------------------~ld~~-~---~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~  793 (888)
                                         .+... .   .......+..+.+|+.+||..+|.+||++ ++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~eiL~  300 (346)
T d1cm8a_         238 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA-GEALA  300 (346)
T ss_dssp             CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred             CCHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHC
T ss_conf             8488886530003443311578666556677556899999999999772995579299-99963

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=0  Score=324.63  Aligned_cols=262  Identities=20%  Similarity=0.268  Sum_probs=198.0

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC---CCCEEEEEE
Q ss_conf             289775411410086689999987--908999993589999903799999999825999700130534---771289997
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYE  601 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~HpnIv~l~g~~---~~~~~lV~E  601 (888)
                      .++|++.+.||+|+||.||+|.+.  +..||||++.....  ...+..|+.+++.++|+|++.+++.+   .+..++|||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHCC--CHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEE
T ss_conf             8889996898507880999999988998999999721005--88899999999970389960179999951987789998


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEC---CCCCEEEECCCCCCCCC
Q ss_conf             348999444310269999999888999999999999998523999602033157908984---79920000443210245
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFGISRFLS  678 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld---~~~~vKL~DFGla~~~~  678 (888)
                      |+ +++|.+.+..  ....+++..+..++.|++.||.|||+   ++|+||||||+|||++   .+..+||+|||+|+.+.
T Consensus        84 ~~-~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          84 LL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             EC-CCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECC
T ss_conf             73-8713332443--06887689999999999999999997---994426678766064335777615650467513425


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH--CCCCCCCCC
Q ss_conf             444467886411137999986667811111499996046888999999999099999985589999841--000012587
Q 002719          679 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLDP  756 (888)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~--~~~~~~ld~  756 (888)
                      ......... ........||+.|+|||++.+..++.++|||||||++|||+||++||............  ........+
T Consensus       158 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ckia_         158 DARTHQHIP-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  236 (299)
T ss_dssp             CTTTCCBCC-CCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC
T ss_pred             CCCCCCCEE-CCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             544554100-0135776787353299999189989832188617789999849876655305779999998523567898


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             7899993569999999999850097999996999999730000
Q 002719          757 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR  799 (888)
Q Consensus       757 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~  799 (888)
                      . ...+...+..+.+|+.+||+.+|.+||++ ..+.+.|+.+.
T Consensus       237 ~-~~~~~~~p~~~~~li~~cl~~~p~~RP~~-~~i~~~l~~~~  277 (299)
T d1ckia_         237 I-EVLCKGYPSEFATYLNFCRSLRFDDKPDY-SYLRQLFRNLF  277 (299)
T ss_dssp             H-HHHTTTSCHHHHHHHHHHHHSCTTCCCCH-HHHHHHHHHHH
T ss_pred             H-HHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHHHHHHHHH
T ss_conf             3-57534788999999999843995579199-99999999999

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=0  Score=313.30  Aligned_cols=260  Identities=20%  Similarity=0.252  Sum_probs=201.2

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC-CCEEEEECCC--CCCEEEEEE
Q ss_conf             289775411410086689999987--90899999358999990379999999982599-9700130534--771289997
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEVWTLVYE  601 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~H-pnIv~l~g~~--~~~~~lV~E  601 (888)
                      .++|.+.++||+|+||+||+|.+.  ++.||||++....  ....+.+|+.++..+.| +|++.+++++  ....++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE
T ss_conf             980699799841788299999998899799999975025--829999999999996489998779999601881179999


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC-----CCCEEEECCCCCCC
Q ss_conf             3489994443102699999998889999999999999985239996020331579089847-----99200004432102
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-----NFVSKLSDFGISRF  676 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~-----~~~vKL~DFGla~~  676 (888)
                      |+ +++|.+++...  ...+++.....++.|++.||.|||+   +||+||||||+|||++.     .+.+||+|||+|+.
T Consensus        82 ~~-~~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          82 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EC-CCCHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHH---CCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEE
T ss_conf             64-88879999752--0311068999999999999999997---796626677131523475434479568723660577


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH---HHH--HHHHCCCC
Q ss_conf             4544446788641113799998666781111149999604688899999999909999998558---999--98410000
Q 002719          677 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE---VQY--ALDTGKLK  751 (888)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~---~~~--~~~~~~~~  751 (888)
                      +......... .........||+.|+|||++.+..++.++|||||||++|+|+||+.||.....   ...  .+...+..
T Consensus       156 ~~~~~~~~~~-~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~  234 (293)
T d1csna_         156 YRDPVTKQHI-PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS  234 (293)
T ss_dssp             SBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCE-EECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             1467665411-102467627751026798964888886999898319999998698767885302199999999705679


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             1258778999935699999999998500979999969999997300000
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA  800 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~~~L~~l~~  800 (888)
                      .....+..    ..++++.+++..|+..+|.+||++ +.+.+.|+.+..
T Consensus       235 ~~~~~l~~----~~p~~l~~ii~~~~~~~~~~rP~y-~~l~~~l~~~~~  278 (293)
T d1csna_         235 TPLRELCA----GFPEEFYKYMHYARNLAFDATPDY-DYLQGLFSKVLE  278 (293)
T ss_dssp             SCHHHHTT----TSCHHHHHHHHHHHHCCTTCCCCH-HHHHHHHHHHHH
T ss_pred             CCHHHHCC----CCCHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHHH
T ss_conf             99589657----998999999999843993008599-999999999999

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=0  Score=315.44  Aligned_cols=245  Identities=19%  Similarity=0.336  Sum_probs=190.7

Q ss_pred             HCCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCC-CCCEEEEECCCC----CCEEE
Q ss_conf             0289775411410086689999987--9089999935899999037999999998259-997001305347----71289
Q 002719          526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP----EVWTL  598 (888)
Q Consensus       526 ~~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~-HpnIv~l~g~~~----~~~~l  598 (888)
                      ..++|.+.++||+|+||+||+|...  +..||||++...   ....+.+|+.+|..+. ||||+++++++.    ...++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEE
T ss_conf             986718978983174819999998899979999998889---99999999999985157998767999998168771268


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCCCC
Q ss_conf             99734899944431026999999988899999999999999852399960203315790898479-92000044321024
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFL  677 (888)
Q Consensus       599 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~-~~vKL~DFGla~~~  677 (888)
                      ||||+.+|+|....      ..+++..+..++.||+.||.|||+   +||+||||||+|||++.+ +.+||+|||+|+..
T Consensus       110 v~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         110 VFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             EEECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             EEEECCCCCHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEECCCCCEEEECCCCCCEEC
T ss_conf             88631798589974------689999999999999999988764---334434564412377489983664156542664


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHC-------
Q ss_conf             544446788641113799998666781111149-999604688899999999909999998558-99998410-------
Q 002719          678 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTG-------  748 (888)
Q Consensus       678 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~-~~~~~~~~-------  748 (888)
                      ......         ....||+.|+|||.+.+. .++.++||||+||++|+|++|+.||..... ........       
T Consensus       181 ~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~  251 (328)
T d3bqca1         181 HPGQEY---------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED  251 (328)
T ss_dssp             CTTCCC---------CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHH
T ss_pred             CCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCH
T ss_conf             688744---------43224864247610268888884523233545558760488999887601899999999878841


Q ss_pred             --------------CCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             --------------00012587---------789999356999999999985009799999699999
Q 002719          749 --------------KLKNLLDP---------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       749 --------------~~~~~ld~---------~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                    .+......         .........+.++.+|+.+||..+|.+||++ ++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~e~L  317 (328)
T d3bqca1         252 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA-REAM  317 (328)
T ss_dssp             HHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             55555422544474300000333433112115521124489999999999866995689089-9996

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=317.26  Aligned_cols=247  Identities=20%  Similarity=0.252  Sum_probs=193.7

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC--CHHHHHHHHHHHHHCCCCCEEEEECCCC--------C
Q ss_conf             289775411410086689999987--908999993589999--9037999999998259997001305347--------7
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--------E  594 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--------~  594 (888)
                      .++|++.++||+|+||+||+|.+.  +..||||++......  ....+.+|+.+|+.++||||++++++|.        .
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCC
T ss_conf             37759988962175859999999999989999998823369799999999999998648987648998970256434576


Q ss_pred             CEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf             12899973489994443102699999998889999999999999985239996020331579089847992000044321
Q 002719          595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS  674 (888)
Q Consensus       595 ~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla  674 (888)
                      ..|+||||+.++.+ +.+.     ..+++..+..++.|++.||.|||+   +||+||||||+|||++.++.+|++|||++
T Consensus        96 ~~~iv~Ey~~~~l~-~~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          96 DVYLVMELMDANLC-QVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             EEEEEEECCSEEHH-HHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             EEEEEEECCCHHHH-HHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCEEEECHHHH
T ss_conf             26999841446778-7650-----389999999999999999988652---21124567763211365443132010232


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC-----
Q ss_conf             024544446788641113799998666781111149999604688899999999909999998558999984100-----
Q 002719          675 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-----  749 (888)
Q Consensus       675 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-----  749 (888)
                      +.......         .+...||+.|+|||++.+..++.++||||+||++|+|++|++||...+..........     
T Consensus       167 ~~~~~~~~---------~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~  237 (355)
T d2b1pa1         167 RTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP  237 (355)
T ss_dssp             -----------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             HCCCCCCC---------CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             11466655---------332214655558133147777877433356625789865989988897788999999720589


Q ss_pred             ---------------CCC---------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             ---------------001---------------2587789999356999999999985009799999699999
Q 002719          750 ---------------LKN---------------LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       750 ---------------~~~---------------~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                                     ...               ...+.....+...+..+.+|+.+||..+|.+||++ ++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta-~elL  309 (355)
T d2b1pa1         238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-DDAL  309 (355)
T ss_dssp             CHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             87999876566777764175435666421264333543210133379999999999876994579089-9996

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=322.13  Aligned_cols=242  Identities=27%  Similarity=0.372  Sum_probs=192.8

Q ss_pred             CCCCCCCEEEECCCEEEEEEEE-----CCEEEEEEEECCCC----CCCHHHHHHHHHHHHHCCC-CCEEEEECCC--CCC
Q ss_conf             8977541141008668999998-----79089999935899----9990379999999982599-9700130534--771
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEV  595 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~-----~~~~VAIK~l~~~~----~~~~~~~~~Ei~iL~~L~H-pnIv~l~g~~--~~~  595 (888)
                      ++|++.++||+|+||+||+|..     ++..||||++....    ......+.+|+.+|++++| |||+++++++  ...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             HCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
T ss_conf             02599989832878399999987658879489999983677210168999999999999864679839996200024873


Q ss_pred             EEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             28999734899944431026999999988899999999999999852399960203315790898479920000443210
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~  675 (888)
                      .++||||+.+|+|.+++...   ..++......++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+|+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~---~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEEEEECCCCCHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHC---CCEEECCCCCCCEEECCCCCEEEEECCCHH
T ss_conf             00123123411799998730---454378888889999999988514---998965477320124699988874132022


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC--CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH--HHHHHCCCC
Q ss_conf             24544446788641113799998666781111149--99960468889999999990999999855899--998410000
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLK  751 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~  751 (888)
                      .+........       ....|++.|++||.+.+.  .++.++|||||||+||+|+||++||.......  ..+..+...
T Consensus       178 ~~~~~~~~~~-------~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~  250 (322)
T d1vzoa_         178 EFVADETERA-------YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK  250 (322)
T ss_dssp             ECCGGGGGGG-------CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH
T ss_pred             HHCCCCCCCC-------CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             2034444322-------122233333106876057768871325177779999997689998888777799999983356


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf             125877899993569999999999850097999996
Q 002719          752 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL  787 (888)
Q Consensus       752 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~  787 (888)
                      .     ....|...+..+.+|+.+||+.+|.+||++
T Consensus       251 ~-----~~~~~~~~s~~~~~li~~~l~~dP~~R~s~  281 (322)
T d1vzoa_         251 S-----EPPYPQEMSALAKDLIQRLLMKDPKKRLGC  281 (322)
T ss_dssp             C-----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             C-----CCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
T ss_conf             8-----998865479999999999744589881999

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=314.64  Aligned_cols=247  Identities=20%  Similarity=0.267  Sum_probs=193.6

Q ss_pred             CCCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC--CHHHHHHHHHHHHHCCCCCEEEEECCCC-------CC
Q ss_conf             289775411410086689999987--908999993589999--9037999999998259997001305347-------71
Q 002719          527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-------EV  595 (888)
Q Consensus       527 ~~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~L~HpnIv~l~g~~~-------~~  595 (888)
                      .++|++.++||+|+||+||+|...  +..||||++......  ....+.+|+.+|+.++|||||++++++.       ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCC
T ss_conf             98718888983178839999999999979999998820028689999999999998668987425999996346456686


Q ss_pred             EEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             28999734899944431026999999988899999999999999852399960203315790898479920000443210
Q 002719          596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       596 ~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~  675 (888)
                      .+++++|+.+|+|.+++.    ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.+|++|||++.
T Consensus        97 ~~~i~~~~~gg~L~~~~~----~~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             EEEEEEEECCCCHHHHCC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf             499999625886232002----2453099999999999999999973---887651667763345543220013210001


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf             24544446788641113799998666781111149-99960468889999999990999999855899998410000125
Q 002719          676 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL  754 (888)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~l  754 (888)
                      ......           ....|++.|+|||.+.+. .++.++|||||||++|+|++|++||...+...............
T Consensus       170 ~~~~~~-----------~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~  238 (348)
T d2gfsa1         170 HTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP  238 (348)
T ss_dssp             CCTGGG-----------SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             CCCCCC-----------CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             257544-----------443454355583553377567855124320589999976889978898899999999730799


Q ss_pred             C-------------------CCCCCC-----CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             8-------------------778999-----9356999999999985009799999699999
Q 002719          755 D-------------------PLAGDW-----PFVQAEQLANLAMRCCEMSRKSRPELGKDVW  792 (888)
Q Consensus       755 d-------------------~~~~~~-----p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v~  792 (888)
                      .                   +.....     ....+..+.+|+.+||..+|.+||++ .+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~elL  299 (348)
T d2gfsa1         239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-AQAL  299 (348)
T ss_dssp             CHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred             CHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCH-HHHH
T ss_conf             757732001024454443035578755566267899999999999775883459389-9985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=308.30  Aligned_cols=249  Identities=24%  Similarity=0.269  Sum_probs=194.1

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCC--CHHHHHHHHHHHHHCCCCCEEEEECCCC--CCEEEEEE
Q ss_conf             89775411410086689999987--908999993589999--9037999999998259997001305347--71289997
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE  601 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~--~~~~~~~Ei~iL~~L~HpnIv~l~g~~~--~~~~lV~E  601 (888)
                      ++|++.++||+|+||+||+|...  +..||||+++.....  ....+.+|+.+|+.++||||+++++++.  ...++|++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEE
T ss_conf             99786269712868199999999999699999980321786899999999999985675788821354444431158863


Q ss_pred             ECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             34899944431026999999988899999999999999852399960203315790898479920000443210245444
Q 002719          602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE  681 (888)
Q Consensus       602 y~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~  681 (888)
                      ++.+++|..++.   ....+++..+..++.|++.||.|||.   ++|+||||||+|||++.++.+||+|||.|.......
T Consensus        82 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          82 FCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             ECCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCC
T ss_conf             023322211212---35654036789999999999877433---998600146761211337826652046011046887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHCCCCC-------
Q ss_conf             467886411137999986667811111499-996046888999999999099999-98558999984100001-------
Q 002719          682 ISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKN-------  752 (888)
Q Consensus       682 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~~~~sDVwSlGviL~elltG~~Pf-~~~~~~~~~~~~~~~~~-------  752 (888)
                      ...        ....++..|+|||++.... ++.++|||||||++|+|++|+.|| ...+.............       
T Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (292)
T d1unla_         156 RCY--------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW  227 (292)
T ss_dssp             SCC--------CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred             CCC--------EEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
T ss_conf             510--------010344310146675069888804440265418899851899998899999999999861189973551


Q ss_pred             -----CCC----------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             -----258----------778999935699999999998500979999969999
Q 002719          753 -----LLD----------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV  791 (888)
Q Consensus       753 -----~ld----------~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v  791 (888)
                           ...          ......+...+..+.+|+.+||+.+|.+||++ +++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa-~e~  280 (292)
T d1unla_         228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA-EEA  280 (292)
T ss_dssp             TTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH-HHH
T ss_pred             HHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCH-HHH
T ss_conf             34432221133444544310433065689999999999864996689099-999

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-42  Score=289.60  Aligned_cols=250  Identities=17%  Similarity=0.244  Sum_probs=187.3

Q ss_pred             CCCCCCCEEEECCCEEEEEEEEC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHCC-----------CCCEEEEECCCC-
Q ss_conf             89775411410086689999987--9089999935899999037999999998259-----------997001305347-
Q 002719          528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----------HPNLVTLVGACP-  593 (888)
Q Consensus       528 ~~y~~~~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~-----------HpnIv~l~g~~~-  593 (888)
                      ++|.+.++||+|+||+||+|...  +..||||+++.... ..+.+.+|+.+++.++           |+||+++++++. 
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCC-CHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf             857998997507781899999999997999999834313-3689999999999840145555542276764789987631


Q ss_pred             ---CCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC------
Q ss_conf             ---71289997348999444310269999999888999999999999998523999602033157908984799------
Q 002719          594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF------  664 (888)
Q Consensus       594 ---~~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~------  664 (888)
                         ...+++++++..+..............+++..+..++.|++.||.|||+.  .||+||||||+|||++.++      
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCHHHEEEECCCCCCCCC
T ss_conf             25652023432000354200000122346786899999999999998887640--5864656770570563057656443


Q ss_pred             CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH--
Q ss_conf             200004432102454444678864111379999866678111114999960468889999999990999999855899--
Q 002719          665 VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--  742 (888)
Q Consensus       665 ~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~sDVwSlGviL~elltG~~Pf~~~~~~~--  742 (888)
                      .+|++|||.|.......           ....||+.|+|||++....++.++||||+||++++|++|++||.......  
T Consensus       170 ~~kl~dfg~s~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~  238 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHY-----------TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT  238 (362)
T ss_dssp             EEEECCCTTCEETTBCC-----------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred             EEEEEECCCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             05675314421234454-----------2236652105713214667776432012378999998788998987554321


Q ss_pred             ----HHHH--------------HCCC-C---------CCCCC-----------CCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             ----9984--------------1000-0---------12587-----------789999356999999999985009799
Q 002719          743 ----YALD--------------TGKL-K---------NLLDP-----------LAGDWPFVQAEQLANLAMRCCEMSRKS  783 (888)
Q Consensus       743 ----~~~~--------------~~~~-~---------~~ld~-----------~~~~~p~~~~~~l~~Li~~Cl~~~p~~  783 (888)
                          ....              .... .         ..+..           .....+...+..+.+|+.+||..||.+
T Consensus       239 ~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~  318 (362)
T d1q8ya_         239 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK  318 (362)
T ss_dssp             CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred             CHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf             02689999999837998788624532200013201220243235776444210001567435899999999987799457


Q ss_pred             CCCHHHHHH
Q ss_conf             999699999
Q 002719          784 RPELGKDVW  792 (888)
Q Consensus       784 RPs~~~~v~  792 (888)
                      |||+ ++++
T Consensus       319 Rpta-~e~L  326 (362)
T d1q8ya_         319 RADA-GGLV  326 (362)
T ss_dssp             CBCH-HHHH
T ss_pred             CCCH-HHHH
T ss_conf             9089-9996

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=2e-23  Score=165.81  Aligned_cols=164  Identities=15%  Similarity=0.127  Sum_probs=119.2

Q ss_pred             CCCCCEEEECCCEEEEEEEEC-CEEEEEEEECCCCCC-----C-------------HHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             775411410086689999987-908999993589999-----9-------------037999999998259997001305
Q 002719          530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-----G-------------PSEFQQEIDILSKIRHPNLVTLVG  590 (888)
Q Consensus       530 y~~~~~LG~G~fG~Vy~g~~~-~~~VAIK~l~~~~~~-----~-------------~~~~~~Ei~iL~~L~HpnIv~l~g  590 (888)
                      +.++++||+|+||.||+|... +..||||+++.....     .             ...+.+|...+.++.|++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             CHHCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             02277802485659999997999999999986044346665565630008889999997789999999816999144998


Q ss_pred             CCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEC
Q ss_conf             34771289997348999444310269999999888999999999999998523999602033157908984799200004
Q 002719          591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD  670 (888)
Q Consensus       591 ~~~~~~~lV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gIiHrDLKp~NILld~~~~vKL~D  670 (888)
                      ...  .+++|||++++.+..          ++......++.+++.+|.|||.   +||+||||||+|||++.++ ++|+|
T Consensus        82 ~~~--~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~~-~~liD  145 (191)
T d1zara2          82 WEG--NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEEG-IWIID  145 (191)
T ss_dssp             EET--TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETTE-EEECC
T ss_pred             ECC--CEEEEEEECCCCCCC----------HHHHHHHHHHHHHHHHHHHHHH---CCEEECCCCHHHEEEECCC-EEEEE
T ss_conf             628--889999504565420----------0157899999999999999826---8889836890361142898-99987


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------HHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             432102454444678864111379999866678------11111499996046888999999
Q 002719          671 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMD------PEFLASGELTPKSDVYSFGIILL  726 (888)
Q Consensus       671 FGla~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~A------PE~l~~~~~~~~sDVwSlGviL~  726 (888)
                      ||+|........                ..|..      .+.+ ...|+.++|+||..--++
T Consensus       146 FG~a~~~~~~~~----------------~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         146 FPQSVEVGEEGW----------------REILERDVRNIITYF-SRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             CTTCEETTSTTH----------------HHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCC----------------HHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHH
T ss_conf             788430899870----------------999987799999997-578998446899999874

>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Putative ethylene-responsive protein AT3g01520/F4P13 7
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=2.4e-21  Score=152.45  Aligned_cols=149  Identities=17%  Similarity=0.229  Sum_probs=120.6

Q ss_pred             CEEEEEECCCCC---------CCHHHHHHHHHCC--CCC---CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             989998449910---------1298999885148--998---19999950899643456888888875689999999999
Q 002719           45 DKIYVAVAKQVK---------ESKSVLLWALQNS--GGK---RICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIE  110 (888)
Q Consensus        45 ~~V~VAVD~s~~---------~S~~AL~Wal~n~--~~~---~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (888)
                      .||+||||+| .         .|++||+||++|.  .++   .|+++||.++....   ...........+.....++..
T Consensus         2 ~ki~vavd~s-~~~~~~~~~~~S~~Al~wal~~~~~~~~~~~~L~~vhv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   77 (171)
T d2gm3a1           2 TKVMVAVNAS-TIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDG---FDDVDSIYASPEDFRDMRQSN   77 (171)
T ss_dssp             EEEEEECCBC-SSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC-------------CCCCSHHHHHHHTTSH
T ss_pred             CEEEEEECCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC---CCCCCCCCCCHHHHHHHHHHH
T ss_conf             8899997698-566778999999999999999998779997289999954565434---344444456777899999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCC
Q ss_conf             99999999999999741196014999503764656999988809988997168986235542100025788772049997
Q 002719          111 RQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPAS  190 (888)
Q Consensus       111 ~~~~~~ll~~~~~~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~~s~~a~~v~~~a~~~  190 (888)
                      .+.+.++|+++...|...++.+++.+ +.|+|+++|+++++++++|+||||++|.+.+.|.+.   +.++..+++.++  
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~~v-~~G~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~l---GSv~~~vi~~~~--  151 (171)
T d2gm3a1          78 KAKGLHLLEFFVNKCHEIGVGCEAWI-KTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFV---GTVSAFCVKHAE--  151 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCEEEEEE-EESCHHHHHHHHHHHHCCSEEEEEECCCC-----------CHHHHHHHHCS--
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEE-EECCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC---CCHHHHHHHCCC--
T ss_conf             99999999999999886399447999-827869999998764477579743677535455744---869999983899--


Q ss_pred             CEEEEEECCCCCC
Q ss_conf             5799994382012
Q 002719          191 CHIWFICNGNLIY  203 (888)
Q Consensus       191 C~v~~i~~gk~~~  203 (888)
                      |+|++|..+..-.
T Consensus       152 cpVlvV~~~~~~~  164 (171)
T d2gm3a1         152 CPVMTIKRNADET  164 (171)
T ss_dssp             SCEEEEECCGGGS
T ss_pred             CCEEEEECCCCCC
T ss_conf             8989996898889

>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.81  E-value=8.3e-19  Score=135.98  Aligned_cols=150  Identities=10%  Similarity=0.113  Sum_probs=120.2

Q ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHCC--CCCCEEEEEEECCCCCCCCCCC--C---CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             599899984499101298999885148--9981999995089964345688--8---88887568999999999999999
Q 002719           43 IEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGT--K---FPASSLEEEKVQAYREIERQDMH  115 (888)
Q Consensus        43 ~~~~V~VAVD~s~~~S~~AL~Wal~n~--~~~~i~lvHV~~p~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~  115 (888)
                      |-++|+||||+| +.|.+||+||++..  .+..|+|+||.++.........  .   ........+....+++...+.++
T Consensus         2 m~~~ILvavD~s-~~s~~al~~a~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
T d1mjha_           2 MYKKILYPTDFS-ETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAK   80 (160)
T ss_dssp             CCCEEEEECCSC-HHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCC-HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             868299998799-8999999999999875399799998305665443333222245332220078899999999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEE
Q ss_conf             99999999974119601499950376465699998880998899716898623554210002578877204999757999
Q 002719          116 NHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWF  195 (888)
Q Consensus       116 ~ll~~~~~~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~~s~~a~~v~~~a~~~C~v~~  195 (888)
                      +.++++...|...++.++..+.+ |+|+++|+++++++++|+||||+|+.+.+++.+.   +..+..++.+++  |+|++
T Consensus        81 ~~l~~~~~~~~~~gv~~~~~~~~-G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~---GS~a~~vl~~s~--~pVlv  154 (160)
T d1mjha_          81 NKMENIKKELEDVGFKVKDIIVV-GIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILL---GSVTENVIKKSN--KPVLV  154 (160)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEE-ECHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSS---CHHHHHHHHHCC--SCEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEEEE-CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC---CCHHHHHHHCCC--CCEEE
T ss_conf             99999999987659769999994-5589877665202422147761689986421410---709999996299--98999


Q ss_pred             EECC
Q ss_conf             9438
Q 002719          196 ICNG  199 (888)
Q Consensus       196 i~~g  199 (888)
                      |.+.
T Consensus       155 V~~~  158 (160)
T d1mjha_         155 VKRK  158 (160)
T ss_dssp             ECCC
T ss_pred             ECCC
T ss_conf             8289

>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Hypothetical protein TTHA0895
species: Thermus thermophilus [TaxId: 274]

Probab=99.70  E-value=1.4e-16  Score=121.59  Aligned_cols=132  Identities=16%  Similarity=0.187  Sum_probs=101.1

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHC--CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             989998449910129899988514--899819999950899643456888888875689999999999999999999999
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL  122 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~AL~Wal~n--~~~~~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  122 (888)
                      ++|+||||+| +.|..|++||++.  ..+.+|+|+||.++....      ..     ........+...+.+++.++++.
T Consensus         2 k~Ilv~~D~s-~~s~~a~~~a~~~a~~~~~~l~ll~V~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~l~~~~   69 (135)
T d2z3va1           2 KTILLAYDGS-EHARRAAEVAKAEAEAHGARLIVVHAYEPVPDY------LG-----EPFFEEALRRRLERAEGVLEEAR   69 (135)
T ss_dssp             CEEEEECCSS-HHHHHHHHHHHHHHHHHTCEEEEEEEECCCCTT------CC-----TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCC-HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CC-----CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9899997899-899999999999999839999999974577543------46-----50268999999999999999999


Q ss_pred             HHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             99741196014999503764656999988809988997168986235542100025788772049997579999
Q 002719          123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI  196 (888)
Q Consensus       123 ~~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~~s~~a~~v~~~a~~~C~v~~i  196 (888)
                      .   ..++.....++..|+|.++||++++++++|+||||+++++.+.|.+.   +..+..+++.++  |+|.+|
T Consensus        70 ~---~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~---Gs~~~~ll~~~~--~pVlvV  135 (135)
T d2z3va1          70 A---LTGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRGLGALGSLFL---GSQSQRVVAEAP--CPVLLV  135 (135)
T ss_dssp             H---HHCCCGGGEEEEESCHHHHHHHHHHHTTCSEEEEESSCSSSCBCSSC---BHHHHHHHHHCS--SCEEEE
T ss_pred             H---HCCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCC---CCHHHHHHHHCC--CCEEEC
T ss_conf             8---66997289999827768999987520001157753679985210413---709999997099--999959

>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Hypothetical protein Rv1636
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.67  E-value=6.9e-16  Score=117.13  Aligned_cols=140  Identities=11%  Similarity=0.119  Sum_probs=106.0

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHCC-CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9899984499101298999885148-998199999508996434568888888756899999999999999999999999
Q 002719           45 DKIYVAVAKQVKESKSVLLWALQNS-GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL  123 (888)
Q Consensus        45 ~~V~VAVD~s~~~S~~AL~Wal~n~-~~~~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  123 (888)
                      ++|+||||+| +.|.+||+||++.. ..+.++++|+..+...... ....       .....+.+...+.++++++.+..
T Consensus         6 k~ILv~vD~s-~~s~~al~~A~~la~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~l~~~~~   76 (147)
T d1tq8a_           6 KTVVVGTDGS-DSSMRAVDRAAQIAGADAKLIIASAYLPQHEDAR-AADI-------LKDESYKVTGTAPIYEILHDAKE   76 (147)
T ss_dssp             CEEEEECCSS-HHHHHHHHHHHHHHTTTSEEEEEEECCC----------------------------CCTHHHHHHHHHH
T ss_pred             CEEEEEECCC-HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC-CCCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9799998899-8999999999999861898799999943666543-2110-------00246899999999999999999


Q ss_pred             HHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf             974119601499950376465699998880998899716898623554210002578877204999757999943
Q 002719          124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN  198 (888)
Q Consensus       124 ~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~~s~~a~~v~~~a~~~C~v~~i~~  198 (888)
                      .|.+.++......+..|++++.|+++++++++|+||||+++.+.+.+.+.   +..+..+++.++  |+|++|..
T Consensus        77 ~~~~~~~~~~~~~~~~G~~~~~i~~~a~~~~~dlIv~g~~~~~~~~~~l~---Gs~~~~ll~~~~--~pVlvV~~  146 (147)
T d1tq8a_          77 RAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLL---GSVPANVSRRAK--VDVLIVHT  146 (147)
T ss_dssp             HHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCCCSHHHHHT---BBHHHHHHHHTT--CEEEEECC
T ss_pred             HHHHCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC---CCHHHHHHHHCC--CCEEEEEC
T ss_conf             99875997389999842769999876423513699855789986332502---649999997089--98899946

>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Hypothetical protein Aq 178
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.62  E-value=1.2e-15  Score=115.48  Aligned_cols=126  Identities=10%  Similarity=0.061  Sum_probs=93.1

Q ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHCC--CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             599899984499101298999885148--998199999508996434568888888756899999999999999999999
Q 002719           43 IEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM  120 (888)
Q Consensus        43 ~~~~V~VAVD~s~~~S~~AL~Wal~n~--~~~~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  120 (888)
                      +-++|+||+|+| +.|..||.||.+..  .+..|+++||.++.............+ ..    ...++...+.+.+.++.
T Consensus         3 ~mk~ILv~~D~S-~~s~~al~~A~~~a~~~~a~l~llhv~~~~~~~~~~~~~~~~~-~~----~~~~e~~~~~~~~~l~~   76 (138)
T d1q77a_           3 AMKVLLVLTDAY-SDCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGLP-FP----PEIKEESKKRIERRLRE   76 (138)
T ss_dssp             CCEEEEEEESTT-CCCHHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHHHHCCC-CC----THHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEECC-HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC-HH----HHHHHHHHHHCCCCCHH
T ss_conf             789999999599-9999999999996544054389999736743332102332221-01----34565654311120022


Q ss_pred             HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCC
Q ss_conf             9999741196014999503764656999988809988997168986235542100
Q 002719          121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDL  175 (888)
Q Consensus       121 ~~~~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~  175 (888)
                      +...+...++.++..+ ..|+|.+.|+++++++++|+||||+||.+.+.|.+.+.
T Consensus        77 ~~~~~~~~~~~~~~~v-~~G~~~~~I~~~a~~~~~DLIV~Gs~g~~~l~r~l~g~  130 (138)
T d1q77a_          77 VWEKLTGSTEIPGVEY-RIGPLSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGL  130 (138)
T ss_dssp             HHHHHHSCCCCCCEEE-ECSCHHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHS
T ss_pred             HCCCCCCCCEEEEEEE-ECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCC
T ss_conf             2011222321479864-02304788887666426999999569976789985599

>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: Ubiquitin conjugation factor E4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.9e-16  Score=116.09  Aligned_cols=76  Identities=29%  Similarity=0.480  Sum_probs=69.3

Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             88778999997630235320488324677-421156654130589988988787677799872199999999999839
Q 002719          812 SEERCEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH  888 (888)
Q Consensus       812 ~~~~~~~P~~f~cPi~~evm~dP~v~~~g-~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~~  888 (888)
                      .....++|++|.|||+.++|.|||+++.| +||++++|.+|+.. +.+||+|+.+|...+|+||.+||.+|++|+.++
T Consensus        13 ~~~~~~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~-~~~~P~~~~~l~~~~L~pN~~Lr~~I~~~~~~~   89 (98)
T d1wgma_          13 EETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER   89 (98)
T ss_dssp             CCCCCSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHS
T ss_pred             HHHHCCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
T ss_conf             76515990774886734688777762355320149999999870-687665556664011201399999999999999

>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Universal stress protein A, UspA
species: Haemophilus influenzae [TaxId: 727]

Probab=99.59  E-value=4.9e-15  Score=111.63  Aligned_cols=135  Identities=16%  Similarity=0.140  Sum_probs=97.4

Q ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHCC--CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             599899984499101298999885148--998199999508996434568888888756899999999999999999999
Q 002719           43 IEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM  120 (888)
Q Consensus        43 ~~~~V~VAVD~s~~~S~~AL~Wal~n~--~~~~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  120 (888)
                      |-++|+||||+| +.|..||.||....  .+..|+++||.+++....  +..      .+......++...+   .....
T Consensus         1 myk~ILv~vD~s-~~s~~al~~A~~~a~~~~~~v~~lhv~~~~~~~~--~~~------~~~~~~~~~~~~~~---~~~~~   68 (140)
T d1jmva_           1 MYKHILVAVDLS-EESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLY--TGL------IDVNMSSMQDRIST---ETQKA   68 (140)
T ss_dssp             CCSEEEEEECCS-TTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGGC--CCC------EEHHHHHHTTCCCC---HHHHH
T ss_pred             CCCEEEEEECCC-HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC--CCC------CCCCHHHHHHHHHH---HHHHH
T ss_conf             987099998799-8999999999999987499099999964044221--233------32235899999999---99999


Q ss_pred             HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             99997411960149995037646569999888099889971689862355421000257887720499975799994
Q 002719          121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC  197 (888)
Q Consensus       121 ~~~~C~~~~v~~e~~~ie~~d~~~~I~e~v~~~~i~~LVmGs~~~~~~~R~~~~~~s~~a~~v~~~a~~~C~v~~i~  197 (888)
                      ....+...+......++..++++++|+++++++++|+||||+|+++...  +    +..+..+++.++  |+|++|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~~~~~dliV~G~~~~~~~~--l----gs~~~~li~~~~--~pVliVp  137 (140)
T d1jmva_          69 LLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSK--L----MSSTRQVMNTIK--IDMLVVP  137 (140)
T ss_dssp             HHHHHHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEECCCCHHH--H----HHHHHHHHTTCC--SEEEEEE
T ss_pred             HHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCHHHEEEECCCCCCCCC--C----CCHHHHHHHCCC--CCEEEEE
T ss_conf             9999985588617999981688999998640031428884058999777--3----539999986169--9899994

>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=9.4e-15  Score=109.78  Aligned_cols=73  Identities=27%  Similarity=0.583  Sum_probs=69.7

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             8999997630235320488324677421156654130589988988787677799872199999999999839
Q 002719          816 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH  888 (888)
Q Consensus       816 ~~~P~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~~  888 (888)
                      .++|++|.|||+.++|.||++++.|+||++..|.+|+..++.+||.++.++...+|+||.+||++|++|+.+|
T Consensus         2 ~eiP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l~pN~~L~~~I~~~l~~~   74 (80)
T d2c2la2           2 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISEN   74 (80)
T ss_dssp             CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCHHHHHCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             9897001185837323403305886856388999998637765787566654235551999999999999987

>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: E3 ubiquitin ligase PUB14
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.46  E-value=1.5e-14  Score=108.51  Aligned_cols=73  Identities=42%  Similarity=0.820  Sum_probs=69.8

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             8999997630235320488324677421156654130589988988787677799872199999999999839
Q 002719          816 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH  888 (888)
Q Consensus       816 ~~~P~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~~~  888 (888)
                      .++|++|.|||+.++|.|||++..|++|.++.|++|+..++.+||.++.++...+++||++||++|++|+.+|
T Consensus         3 peiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~pN~~L~~~I~~~~~~~   75 (78)
T d1t1ha_           3 PEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESN   75 (78)
T ss_dssp             CCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCHHHCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             9899627991718121083372677743399999999988887886556377565624699999999999995

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.86  E-value=1.4e-08  Score=69.82  Aligned_cols=147  Identities=16%  Similarity=0.129  Sum_probs=98.7

Q ss_pred             HHHHHCCCCCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHCC-CCCEEEEECCC--CCCEEE
Q ss_conf             662102897754114100866899999879089999935899999037999999998259-99700130534--771289
Q 002719          522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL  598 (888)
Q Consensus       522 ei~~~~~~y~~~~~LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~-HpnIv~l~g~~--~~~~~l  598 (888)
                      +++..-..|...+..+.+....||+....+..+.+|+...........+.+|...+..+. +--+.+++..+  ....++
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHHHHCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
T ss_conf             99975135279976789987718999908986999984887653255699999999987606998728999750896499


Q ss_pred             EEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q ss_conf             9973489994443102699999998889999999999999985239----------------------------------
Q 002719          599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK----------------------------------  644 (888)
Q Consensus       599 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~----------------------------------  644 (888)
                      ||++++|.++......        ......++.+++..|..||+..                                  
T Consensus        88 v~~~l~G~~~~~~~~~--------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T d1j7la_          88 LMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEECCSSEEHHHHTTT--------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGS
T ss_pred             EEEECCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9986043343543344--------02699999989999999855684214357644656555778998776555543033


Q ss_pred             ----------------------CCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             ----------------------99602033157908984799200004432102
Q 002719          645 ----------------------PHSIVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       645 ----------------------~~gIiHrDLKp~NILld~~~~vKL~DFGla~~  676 (888)
                                            +..++|+|+.|.|||++.+..+-|.||+.+..
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEECHHCCC
T ss_conf             232005799999999844986781789860047642364996599960231441

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.25  E-value=6.9e-06  Score=52.50  Aligned_cols=75  Identities=17%  Similarity=0.129  Sum_probs=52.0

Q ss_pred             CEEEECCCEEEEEEEEC--CEEEEEEEECCC----C---CCCHHHHHHHHHHHHHCC-C--CCEEEEECCCCCCEEEEEE
Q ss_conf             11410086689999987--908999993589----9---999037999999998259-9--9700130534771289997
Q 002719          534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----S---LQGPSEFQQEIDILSKIR-H--PNLVTLVGACPEVWTLVYE  601 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~--~~~VAIK~l~~~----~---~~~~~~~~~Ei~iL~~L~-H--pnIv~l~g~~~~~~~lV~E  601 (888)
                      +.||.|....||+....  +..+++|.-.+.    .   .....+...|+..|..+. +  ..+.+++++..+...+|||
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE  111 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME  111 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred             EEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE
T ss_conf             98079852768999957998489996177130346777888778999999999986505798855289985988779871


Q ss_pred             ECCCCCH
Q ss_conf             3489994
Q 002719          602 YLPNGSL  608 (888)
Q Consensus       602 y~~~gsL  608 (888)
                      ++.+..+
T Consensus       112 ~L~~~~~  118 (392)
T d2pula1         112 DLSHLKI  118 (392)
T ss_dssp             CCTTSEE
T ss_pred             CCCCCCC
T ss_conf             3577653

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.23  E-value=7.5e-06  Score=52.25  Aligned_cols=127  Identities=17%  Similarity=0.141  Sum_probs=81.2

Q ss_pred             EEEECCC-EEEEEEEECC-EEEEEEEECCCCCCCHHHHHHHHHHHHHCCC--CCEEEEECCC--CCCEEEEEEECCCCCH
Q ss_conf             1410086-6899999879-0899999358999990379999999982599--9700130534--7712899973489994
Q 002719          535 KIGEGGY-GSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--PNLVTLVGAC--PEVWTLVYEYLPNGSL  608 (888)
Q Consensus       535 ~LG~G~f-G~Vy~g~~~~-~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~H--pnIv~l~g~~--~~~~~lV~Ey~~~gsL  608 (888)
                      .+..|.. ..||+....+ ..+.+|......   ...+..|+..+..|..  -.+.++++++  ....++||++++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             ECCCCCCCCEEEEEEECCCCEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCC
T ss_conf             7678654775899993898789999589667---7689999999999986599988613222456615999874413554


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------------------------------
Q ss_conf             443102699999998889999999999999985239--------------------------------------------
Q 002719          609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK--------------------------------------------  644 (888)
Q Consensus       609 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~--------------------------------------------  644 (888)
                      ....        +.   ...++.++...|..||...                                            
T Consensus        94 ~~~~--------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          94 LSSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             TTSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             CCCC--------CC---HHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             3221--------26---899999999999987368854488755412468899999987541101134011213799999


Q ss_pred             -----------CCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             -----------9960203315790898479920000443210
Q 002719          645 -----------PHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       645 -----------~~gIiHrDLKp~NILld~~~~vKL~DFGla~  675 (888)
                                 +..++|+|+.|.|||++.+..+-|.||+.+.
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHCCCCCCCEEEECCCCCCCEEEECCCEEEEEECHHCC
T ss_conf             999871876579567867888763577379658999853326

>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: U-box
domain: Pre-mRNA splicing factor Prp19
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=1.5e-07  Score=63.18  Aligned_cols=52  Identities=23%  Similarity=0.436  Sum_probs=48.2

Q ss_pred             CCCHHHHHHHCCCCCC-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             7630235320488324-6774211566541305899889887876777998721
Q 002719          822 FTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN  874 (888)
Q Consensus       822 f~cPi~~evm~dP~v~-~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn  874 (888)
                      +.|||+.++|.||+++ ..|++|+++.|.+|+.+ +.+||+++++|...+|+|.
T Consensus         1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~-~~~CP~c~~~l~~~dLipi   53 (56)
T d2baya1           1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVEI   53 (56)
T ss_dssp             CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCCGGGCEEC
T ss_pred             CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH-CCCCCCCCCCCCHHHCEEC
T ss_conf             9993678568865745789984559999998760-3679854781887753647

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.96  E-value=0.0002  Score=43.09  Aligned_cols=155  Identities=14%  Similarity=0.109  Sum_probs=82.4

Q ss_pred             CHHHHHHHCCCCCCCCE-----EEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC-----CCEEEE
Q ss_conf             76666210289775411-----41008668999998790899999358999990379999999982599-----970013
Q 002719          519 SFSEIEGATHNFDPSLK-----IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-----PNLVTL  588 (888)
Q Consensus       519 ~~~ei~~~~~~y~~~~~-----LG~G~fG~Vy~g~~~~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~H-----pnIv~l  588 (888)
                      +..++.....+|.++..     |..|---+.|+....+..+++|+....  .....+..+..++..|..     |..+..
T Consensus         4 s~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~--~~~~~l~~~~~~l~~L~~~g~pvp~pi~~   81 (316)
T d2ppqa1           4 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPR   81 (316)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred             CHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEECCCC--CCHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf             9999999998679998568523788852673899978972899980789--99889999999987543025554556410


Q ss_pred             E-CC----CCCCEEEEEEECCCCCHHHHH--------------HC--C--CCC--CCCCH------------------HH
Q ss_conf             0-53----477128999734899944431--------------02--6--999--99998------------------88
Q 002719          589 V-GA----CPEVWTLVYEYLPNGSLEDRL--------------SC--K--DNS--PPLSW------------------QT  625 (888)
Q Consensus       589 ~-g~----~~~~~~lV~Ey~~~gsL~~~L--------------~~--~--~~~--~~l~~------------------~~  625 (888)
                      . |.    .......++.++.+.......              +.  .  ...  .....                  ..
T Consensus        82 ~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (316)
T d2ppqa1          82 KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG  161 (316)
T ss_dssp             TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred             CCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCHH
T ss_conf             48976213412550245311465533320467888889987645444320245310111012002456777765311412


Q ss_pred             HHHHHHHHHHHHHHHHH-CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             99999999999999852-399960203315790898479920000443210
Q 002719          626 RIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISR  675 (888)
Q Consensus       626 ~~~ia~qia~aL~~LH~-~~~~gIiHrDLKp~NILld~~~~vKL~DFGla~  675 (888)
                      ....+..+...+..... .-+.|+||+|+.+.||+++.+...-|.||+.+.
T Consensus       162 ~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         162 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCC
T ss_conf             799999998764204855454503337863656402045412674222123

>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: bard1 RING domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=5.6e-05  Score=46.63  Aligned_cols=65  Identities=15%  Similarity=0.250  Sum_probs=57.4

Q ss_pred             CCCCCCHHHHHHHCCCCCC-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9997630235320488324-6774211566541305899889887876777998721999999999998
Q 002719          819 PPYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQ  886 (888)
Q Consensus       819 P~~f~cPi~~evm~dP~v~-~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~  886 (888)
                      ...|.|||+.++|.+|+.. .=|++|-+..|.+|+..   .||..+.++...++.||.+|+.+|+.+..
T Consensus        20 ~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~---~CP~Cr~~~~~~~l~~n~~l~~lv~~~~~   85 (97)
T d1jm7b_          20 EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGT---GCPVCYTPAWIQDLKINRQLDSMIQLCSK   85 (97)
T ss_dssp             HHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTT---BCSSSCCBCSCSSCCCCHHHHHHHHHHHH
T ss_pred             HHCCCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCHHHCCCCHHHHHHHHHHHH
T ss_conf             1228992587221127465889993029999999853---66622786765518605899999999999

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.63  E-value=0.00034  Score=41.55  Aligned_cols=72  Identities=18%  Similarity=0.215  Sum_probs=48.0

Q ss_pred             CEEEECCCEEEEEEEECC---------EEEEEEEECCCCCCCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCEEEEEEEC
Q ss_conf             114100866899999879---------089999935899999037999999998259-9970013053477128999734
Q 002719          534 LKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYL  603 (888)
Q Consensus       534 ~~LG~G~fG~Vy~g~~~~---------~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~-HpnIv~l~g~~~~~~~lV~Ey~  603 (888)
                      ..|+.|-.-.+|+.....         ..|.+++.. . ....-...+|..+++.+. +.-..+++++|++  .+|+||+
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~--g~I~efi  123 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG--GRLEEYI  123 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--EEEECCC
T ss_pred             EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC-C-CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC--CEEEEEE
T ss_conf             991785334348999688775445789817999659-9-61165899999999999757999808998189--5699973


Q ss_pred             CCCCHH
Q ss_conf             899944
Q 002719          604 PNGSLE  609 (888)
Q Consensus       604 ~~gsL~  609 (888)
                      +|.+|.
T Consensus       124 ~g~~l~  129 (395)
T d1nw1a_         124 PSRPLS  129 (395)
T ss_dssp             CEEECC
T ss_pred             CCCCCC
T ss_conf             455488

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.0025  Score=35.97  Aligned_cols=133  Identities=12%  Similarity=0.163  Sum_probs=73.6

Q ss_pred             CEEEEEEEEC-CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC--EEEEECC-------CCCCEEEEEEECCCCCHHH
Q ss_conf             6689999987-9089999935899999037999999998259997--0013053-------4771289997348999444
Q 002719          541 YGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGA-------CPEVWTLVYEYLPNGSLED  610 (888)
Q Consensus       541 fG~Vy~g~~~-~~~VAIK~l~~~~~~~~~~~~~Ei~iL~~L~Hpn--Iv~l~g~-------~~~~~~lV~Ey~~~gsL~~  610 (888)
                      --.||+.... +..+++|+.++.. .....+..|...+..|....  ++..+..       .....+.++++++|..+..
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             CCEEEEEECCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEEEEEEEEEECCCCCCCC
T ss_conf             202699983899979999847877-8899999999999999855998787520689805665347999986527768899


Q ss_pred             ----HH----------HC----C--CCCCCCCHH-------------------HHHHHHHHHHHHHHHHH----HCCCCC
Q ss_conf             ----31----------02----6--999999988-------------------89999999999999985----239996
Q 002719          611 ----RL----------SC----K--DNSPPLSWQ-------------------TRIRIATELCSVLIFLH----SCKPHS  647 (888)
Q Consensus       611 ----~L----------~~----~--~~~~~l~~~-------------------~~~~ia~qia~aL~~LH----~~~~~g  647 (888)
                          .+          +.    .  .....+++.                   ....+...+...+..+.    ...+.+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             99999999899999988630357865567789788766568999874769988989999999999999998454568712


Q ss_pred             EEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             02033157908984799200004432102
Q 002719          648 IVHGDLKPANILLDANFVSKLSDFGISRF  676 (888)
Q Consensus       648 IiHrDLKp~NILld~~~~vKL~DFGla~~  676 (888)
                      +||+|+.+.|||++.+  ..+.||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             EECCCCCCCCEEEECC--CEEEECHHCCC
T ss_conf             0247888042878389--35886520146

>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: brca1 RING domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=9.1e-05  Score=45.26  Aligned_cols=67  Identities=15%  Similarity=0.328  Sum_probs=59.0

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             997630235320488324677421156654130589--9889887876777998721999999999998
Q 002719          820 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSG--HETSPMTNLPLAHKNLVPNLALRSAIQEWLQ  886 (888)
Q Consensus       820 ~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~--~~~~p~t~~~l~~~~l~pn~~l~~~i~~~~~  886 (888)
                      +.|.|||+.+++.+|++++=|++|-+..|..|+...  ...||+-+.++...+|.||..|++.|+.+..
T Consensus        20 ~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~ve~l~~   88 (103)
T d1jm7a_          20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLK   88 (103)
T ss_dssp             HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHHH
T ss_pred             CCCCCCCCCCHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
T ss_conf             584997218231891883799864167899999977999809698883875528757899999999999

>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: V(D)J recombination activating protein 1 (RAG1), dimerization domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.00021  Score=42.95  Aligned_cols=63  Identities=14%  Similarity=0.227  Sum_probs=55.1

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHH
Q ss_conf             99763023532048832467742115665413058998898878767779987-2199999999
Q 002719          820 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV-PNLALRSAIQ  882 (888)
Q Consensus       820 ~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~-pn~~l~~~i~  882 (888)
                      +.|.|||+.+.|.||++++=|++|=+..|.+|+..++.+||+-+.++...+|. |..++.+.+.
T Consensus        22 ~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~~P~~~~l~~l~   85 (86)
T d1rmda2          22 KSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILN   85 (86)
T ss_dssp             HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHH
T ss_pred             CCCCCCCCCCCHHCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHC
T ss_conf             6759956784441555267887631999999996487907036997996663598999999861

>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: CBL
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.0034  Score=35.14  Aligned_cols=53  Identities=17%  Similarity=0.331  Sum_probs=46.8

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99763023532048832467742115665413058998898878767779987
Q 002719          820 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV  872 (888)
Q Consensus       820 ~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~  872 (888)
                      ++..|||..+.+.+|++++=|++|-++.|..|+.+++.+||+-|..+...+.+
T Consensus        22 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~~i   74 (79)
T d1fbva4          22 TFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPI   74 (79)
T ss_dssp             CTTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCCCS
T ss_pred             CCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEE
T ss_conf             98999358976899699589993529999999997858189979586477666

>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: PP-loop ATPase
domain: TilS-like protein Aq 1887
species: Aquifex aeolicus [TaxId: 63363]

Probab=86.49  E-value=0.65  Score=20.38  Aligned_cols=95  Identities=13%  Similarity=0.136  Sum_probs=60.0

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHC----CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9989998449910129899988514----899819999950899643456888888875689999999999999999999
Q 002719           44 EDKIYVAVAKQVKESKSVLLWALQN----SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD  119 (888)
Q Consensus        44 ~~~V~VAVD~s~~~S~~AL~Wal~n----~~~~~i~lvHV~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  119 (888)
                      .++|+|||-|. .-|+-.| +.|..    .....+.++||.+-...          .                 +..-..
T Consensus        24 ~~kv~Va~SGG-~DS~~Ll-~lL~~~~~~~~~~~i~~~~vdh~~r~----------~-----------------s~~~~~   74 (216)
T d1wy5a1          24 ERRVLIAFSGG-VDSVVLT-DVLLKLKNYFSLKEVALAHFNHMLRE----------S-----------------AERDEE   74 (216)
T ss_dssp             CCEEEEECCSS-HHHHHHH-HHHHHSTTTTTCSEEEEEEEECCSST----------H-----------------HHHHHH
T ss_pred             CCEEEEEECCC-HHHHHHH-HHHHHHHHHCCCCCEEEEEEECCCCC----------C-----------------HHHHHH
T ss_conf             98699996785-9999999-99999987668770888875112341----------0-----------------332134


Q ss_pred             HHHHHHHHCCCEEEEEEEECC--------CH--------HHHHHHHHHHCCCCEEEECCCCCCH
Q ss_conf             999997411960149995037--------64--------6569999888099889971689862
Q 002719          120 MCLLICRQMGVRAEKLDTESE--------ST--------EKGILELISHYGIRKLVMGAAADKH  167 (888)
Q Consensus       120 ~~~~~C~~~~v~~e~~~ie~~--------d~--------~~~I~e~v~~~~i~~LVmGs~~~~~  167 (888)
                      ....+|...+|.....-+...        ..        ...+.+++.+++++.|++|-|.+..
T Consensus        75 ~~~~~~~~l~i~~~i~~~~~~~~~~~~~~~~~~~~R~~Ry~~l~~~a~~~~~~~ia~GH~~dD~  138 (216)
T d1wy5a1          75 FCKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDL  138 (216)
T ss_dssp             HHHHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCH
T ss_conf             7899998620001021021011113776445787999998876411112231215765202415

>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Acute promyelocytic leukaemia proto-oncoprotein PML
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.45  E-value=0.52  Score=20.96  Aligned_cols=51  Identities=16%  Similarity=0.203  Sum_probs=43.6

Q ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             9976302353204883246774211566541305899889887876777998721
Q 002719          820 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN  874 (888)
Q Consensus       820 ~~f~cPi~~evm~dP~v~~~g~tye~~~i~~wl~~~~~~~p~t~~~l~~~~l~pn  874 (888)
                      ..+.|||..+.+.||++.+=|++|=...|++|    ..+||+-+.+++....+|+
T Consensus         5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~----~~~CP~Cr~~~~~~~~~~a   55 (56)
T d1bora_           5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS----GMQCPICQAPWPLGADTPA   55 (56)
T ss_dssp             CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSSCCSSCCC
T ss_pred             CCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC----CCCCCCCCCCCCCCCCCCC
T ss_conf             78898402941589789017777859988729----7968497996669989888