Citrus Sinensis ID: 002850

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870----

MMFSGQRGANPLSVFRWKWRGDSSLTTGLLNDVPPEIELSDYAHGRVPSPGSESPAGLLNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWEPNAQGKQFLLNLRSFRERKVRGQGNRHAYSSPRLWRGSPSLRVHGERNSSLSREWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVTEQQQGDFWMPTQNEARYDQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRSHWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHKLSRTSYIDDLEAGSGDVNLHFDDIYNGKPPETPRVNLEPPRL

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHccEEEEEHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHcccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccccHHHHHcccccEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccc

ccccccccccccHHccccccccccccHcHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHcEEHEEEccccccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHcHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHEEEccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEEcccccHHHHHHHHHHcEEEEcccccEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHcHHHHHHHcccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccHccccccccccccccccHccccccHHHHHHHHccccccHHHHHHcccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccHcccccEEccccHHHccccccccccccccccccccccccccccc

mmfsgqrganplsvfrwkwrgdsslttgllndvppeielsdyahgrvpspgsespagllngeslnvapiadLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWdglrnakcgmdavesgikpcdlakealhehpltpltlskAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYynslhvtdseiqtmPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGvlafpiyswvpgagptvrfgsdgvqHRLILTKTLEWTLNWCILQSmfdrnfcvrrdfvsnpktLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEqfynhpstassrRWSNLSKWMFREFNEVDHLFkhrinssvvhssdylkqfpsPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTdellvldpegaMSIVVQHThympkrwrgkentEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVdvegvghvcsfstfdfqnhgnsnygspyhtprtqrssqgkmeKSFLSFQssypswepnaqgKQFLLNLRSFRERkvrgqgnrhayssprlwrgspslrvhgernsslsrewpynahgtgyqlgslwlideeprnhpylldwyytsqhqqtaghtrththtldippgpfdvteqqqgdfwmptqnearydqfwdhdygdrsethleastsapffresvlqhhdsnnlaqptrshwwartsphdaqpqssfleppdfnhytaqtnvhdnlsersLEEQEQFLYWRNshklsrtsyiddleagsgdvnlhfddiyngkppetprvnlepprl

mmfsgqrganplsvfrwkWRGDSSLTTGLLNDVPPEIELSDYAHGRVPSPGSESPAGLLNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFynhpstassrRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHThympkrwrgkenteMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWEPNAQGKQFLLNLRSFRERKVrgqgnrhayssprlwrgspslrVHGERNsslsrewpynAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVTEQQQGDFWMPTQNEARYDQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRSHWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHKLSRTSYIDDLEAGSGDVNLHFDDIyngkppetprvnlepprl

MMFSGQRGANPLSVFRWKWRGDSSLTTGLLNDVPPEIELSDYAHGRVPSPGSESPAGLLNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKvvqlqssqqlcvvKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIfltpllllfvvpKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWEPNAQGKQFLLNLRSFRERKVRGQGNRHAYSSPRLWRGSPSLRVHGERNSSLSREWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVTEQQQGDFWMPTQNEARYDQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRSHWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHKLSRTSYIDDLEAGSGDVNLHFDDIYNGKPPETPRVNLEPPRL

***********LSVFRWKWRGDSSLTTGLLNDV***************************GESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQN*********************************************FLLNL*****************************************EWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQT********HTLDI************GDFWMPTQNEARYDQFWDHDY*********************************************************************************QFLYWRNSHKLSRTSYIDDLEAGSGDVNLHFDDIY*****************

******************************************************************APIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTF******************************FLSFQSSYPS********************************************************************************************************************************************************************************************************************************************TSYIDDLEAGSGDVNLHFDDIY*****************

********ANPLSVFRWKWRGDSSLTTGLLNDVPPEIELSDYAHG*********PAGLLNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNH********WSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPY**********************SYPSWEPNAQGKQFLLNLRSFRER*********AYSSPRLWRGSPSLR********LSREWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQ***********THTLDIPPGPFDVTEQQQGDFWMPTQNEARYDQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRSHWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHKLSRTSYIDDLEAGSGDVNLHFDDIYNGKPPETPRVNLEPPRL

*************************************************************ESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNA*******ESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGHVCSFSTFDFQNH******************QGKMEKSFLSFQSSYPSWEPNAQGKQFLLNLRSFRERKVRGQGNRHAYSSPRLWRGSPSLRVHGERNSSLSREWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQ****************************************DQFWDHDYGDRSETHLEASTSAPFFRESVLQH****************************FLEPPDFNHYT******************************RTSYIDDLEAGSGDVNLHFDDIYNGK**************

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		874	2.2.26 [Sep-21-2011]
Q54NA3		699	Autophagy-related protein	yes	no	0.601	0.752	0.327	2e-86
Q4P683		788	Autophagy-related protein	N/A	no	0.582	0.645	0.296	3e-82
P0CM40		879	Autophagy-related protein	yes	no	0.605	0.601	0.296	3e-81
P0CM41		879	Autophagy-related protein	N/A	no	0.605	0.601	0.296	3e-81
Q6TGJ4		751	Autophagy-related protein	no	no	0.577	0.672	0.302	5e-81
Q6C2F5		788	Autophagy-related protein	yes	no	0.578	0.642	0.314	7e-81
Q7S4D7		908	Autophagy-related protein	N/A	no	0.600	0.578	0.309	9e-80
Q4WLT9		951	Autophagy-related protein	yes	no	0.570	0.524	0.316	4e-79
Q2UUT6		951	Autophagy-related protein	yes	no	0.574	0.527	0.300	5e-79
A1CU77		949	Autophagy-related protein	N/A	no	0.570	0.525	0.305	8e-79

>sp\|Q54NA3\|ATG9_DICDI Autophagy-related protein 9 OS=Dictyostelium discoideum GN=atg9 PE=3 SV=1	Back alignment and function desciption

 Score =  321 bits (822), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 187/571 (32%), Positives = 316/571 (55%), Gaps = 45/571 (7%)

Query: 57  GLLNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFV 116
            LL+   +++  I +LD F   +Y+Y+  KG  CI    + EL+S  F + F  F + FV
Sbjct: 60  SLLHESPVSIPAIHNLDSFLTDVYNYFRGKGFMCIFFNDLFELVSSLFVVLFFTFLVCFV 119

Query: 117 DWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFL 176
           D+  L + +           P    +E+++     P+ L     + +L +FS+YW+    
Sbjct: 120 DYSKLFSEQM----------PPPALRESVNFSAPIPIWL-----MVFLVIFSLYWLSKLF 164

Query: 177 RFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKD-LSAHDV 235
            FF+ +K    I  FY N+L + + +IQT+ W  ++ K+V +    +LC+VK+ ++A D+
Sbjct: 165 SFFSSIKTNWEISSFYKNTLKINEDDIQTIEWREVVSKIVLVP---RLCIVKENMNALDI 221

Query: 236 VMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCI 295
             R+MRKENY+IG++N+ +L   I        P +R       +   +TKTLEW+L + +
Sbjct: 222 ANRIMRKENYIIGLINQRILNLSI------PFPFLR-------NLTFITKTLEWSLMYSL 268

Query: 296 LQSMFDRNFCVRRDFVSNP-------KTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHA 348
              +FD N  ++ +F  +P       + L +R M +G+  L  +PF+  F+++  F  +A
Sbjct: 269 FNYIFDENGIIKSEF-QDPTQRKRLSRGLSRRFMTIGILGLFTTPFIFFFLLINFFFEYA 327

Query: 349 EQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILA 408
           E+  N P +  SR WS L++W FRE NE+ H F++R+N S  H++ Y++ FPS ++S +A
Sbjct: 328 EELKNRPGSLFSREWSPLARWEFRELNELPHYFQNRLNLSYSHANQYVESFPSQMLSTIA 387

Query: 409 KFISFVSGGFAAVLIIIAFLEESLLEGH-IFGRNLLWYAAVFGTITAISRAAVTDELLVL 467
           KFISF+ G   AV I++  + +  +  + IF R  +WY  + GTI AI+R+ + DE  V 
Sbjct: 388 KFISFLFGSVLAVFIVLGIVSDHFIMNYQIFDRTPIWYIGILGTIVAITRSLIVDENQVF 447

Query: 468 DPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLF 527
            P   M+  VQ+THY+P  W GK +T  VR EF  +F+Y  +  + ++ S+  TP +L+F
Sbjct: 448 QPAKHMARTVQNTHYLPMSWVGKTHTHKVRDEFLVLFEYRIVDFVRDIFSVLFTPFILIF 507

Query: 528 VVPKRVDDILQFIADYTVDVEGVGHVCSFSTF-DFQNHGNSNYGSPYHTP-RTQRSSQGK 585
            +PK    I+ F  + TV +EGVG +C    F + +  G++++GS  H+  +   ++  K
Sbjct: 508 SLPKSSQAIIDFFGNNTVVLEGVGPICQLGDFSNIRKLGDNSFGSLNHSQNKISLTNNAK 567

Query: 586 MEKSFLSFQSSYPSWEPNAQGKQFLLNLRSF 616
           +EKS ++F+   P W  N    + L NL  F
Sbjct: 568 LEKSIINFKCLNPEW--NTDNNELLQNLNEF 596

Involved in autophagy vesicles formation. May recruit atg8 to the pre-autophagosomal structure.
Dictyostelium discoideum (taxid: 44689)

>sp\|Q4P683\|ATG9_USTMA Autophagy-related protein 9 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ATG9 PE=3 SV=1	Back alignment and function description

>sp\|P0CM40\|ATG9_CRYNJ Autophagy-related protein 9 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATG9 PE=3 SV=1	Back alignment and function description

>sp\|P0CM41\|ATG9_CRYNB Autophagy-related protein 9 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATG9 PE=3 SV=1	Back alignment and function description

>sp\|Q6TGJ4\|ATG9_CRYGA Autophagy-related protein 9 OS=Cryptococcus gattii GN=ATG9 PE=3 SV=1	Back alignment and function description

>sp\|Q6C2F5\|ATG9_YARLI Autophagy-related protein 9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG9 PE=3 SV=1	Back alignment and function description

>sp\|Q7S4D7\|ATG9_NEUCR Autophagy-related protein 9 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg-9 PE=3 SV=1	Back alignment and function description

>sp\|Q4WLT9\|ATG9_ASPFU Autophagy-related protein 9 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg9 PE=3 SV=1	Back alignment and function description

>sp\|Q2UUT6\|ATG9_ASPOR Autophagy-related protein 9 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atg9 PE=3 SV=1	Back alignment and function description

>sp\|A1CU77\|ATG9_ASPCL Autophagy-related protein 9 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=atg9 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		874
255583208		864	conserved hypothetical protein [Ricinus	0.972	0.983	0.800	0.0
224066265		876	predicted protein [Populus trichocarpa]	0.981	0.979	0.788	0.0
224082790		876	predicted protein [Populus trichocarpa]	0.981	0.979	0.763	0.0
225437848		957	PREDICTED: autophagy-related protein 9-l	0.940	0.858	0.794	0.0
356503602		872	PREDICTED: autophagy-related protein 9-l	0.977	0.979	0.739	0.0
356545851		868	PREDICTED: autophagy-related protein 9-l	0.969	0.975	0.733	0.0
356570636		941	PREDICTED: autophagy-related protein 9 [	0.969	0.900	0.728	0.0
297744125		816	unnamed protein product [Vitis vinifera]	0.918	0.984	0.727	0.0
356536827		863	PREDICTED: autophagy-related protein 9-l	0.974	0.987	0.740	0.0
449496947		882	PREDICTED: LOW QUALITY PROTEIN: autophag	0.973	0.964	0.682	0.0

>gi\|255583208\|ref\|XP_002532369.1\| conserved hypothetical protein [Ricinus communis] gi\|223527925\|gb\|EEF30012.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score = 1434 bits (3711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/869 (80%), Positives = 774/869 (89%), Gaps = 19/869 (2%)

Query: 2   MFSGQRGANPLSVFRWKWRGDSSLTTGLLNDVPPEIELSDYAHGRVPSPGSESPAGLLNG 61
           M+S ++G+  LS+F+W+ RG+S+LTTGLLNDVPPEIELSDY  GRVPSPGSESP+G LNG
Sbjct: 1   MYSWKKGSTALSIFKWRLRGESTLTTGLLNDVPPEIELSDY--GRVPSPGSESPSGFLNG 58

Query: 62  ESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGL 121
           ESLNV PIADLDLFFERLYSYYCEKGL CIIIKWIVELLSLGFTICFS FFLL++DW+GL
Sbjct: 59  ESLNVEPIADLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYIDWNGL 118

Query: 122 RNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRFFAQ 181
           RNAKCGMDAVESGIKPCDLAKEALH+HPLTPLT+SKA+IVGYL LFSIY IFCFLRFFAQ
Sbjct: 119 RNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTISKAIIVGYLGLFSIYLIFCFLRFFAQ 178

Query: 182 LKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVVKDLSAHDVVMRLMR 241
           L+D LGIRHFYYNSLHVTD+EI TMPWATILEKVVQLQSSQQLCVVKDLSAH+VVMRLMR
Sbjct: 179 LRDILGIRHFYYNSLHVTDNEIHTMPWATILEKVVQLQSSQQLCVVKDLSAHEVVMRLMR 238

Query: 242 KENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFD 301
           KENYLIGMLNKGVLAFPI  WVPG GP V++G +G Q+RLILTKTLEWTLNWCILQSMFD
Sbjct: 239 KENYLIGMLNKGVLAFPISPWVPGTGPIVKYGPNGAQYRLILTKTLEWTLNWCILQSMFD 298

Query: 302 RNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSR 361
           RNFCVRRDF+SNPKTL+KRLMVVG A+LLLSPFLVIFM+VYLFLRHAEQFYNHPSTASSR
Sbjct: 299 RNFCVRRDFISNPKTLKKRLMVVGFAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSR 358

Query: 362 RWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAV 421
           RWSNLSKW+FREFNEVDHLFKHRIN S++H+SDYLKQFPSPIISI+AKFISFVSGGFAA+
Sbjct: 359 RWSNLSKWIFREFNEVDHLFKHRINGSIMHASDYLKQFPSPIISIVAKFISFVSGGFAAI 418

Query: 422 LIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTH 481
           LIIIAFLEESLLEGHIFGRNL WYAAVFGTITAISRAAVTDELLVLDPEGAMS+VVQHTH
Sbjct: 419 LIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAVTDELLVLDPEGAMSMVVQHTH 478

Query: 482 YMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIA 541
           YMPKRWRGKEN+E VR+EFET+FQYTGMMLLEEMASIFLTP LLLF+VPKRVDDILQFIA
Sbjct: 479 YMPKRWRGKENSETVRMEFETLFQYTGMMLLEEMASIFLTPFLLLFIVPKRVDDILQFIA 538

Query: 542 DYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWE 601
           D+T+DVEGVGH+CSFS FDFQNHGNSNYGSPYHTP TQRSSQGKMEKSFLSFQSSYPSWE
Sbjct: 539 DFTMDVEGVGHICSFSAFDFQNHGNSNYGSPYHTPHTQRSSQGKMEKSFLSFQSSYPSWE 598

Query: 602 PNAQGKQFLLNLRSFRERKVRGQGNRHAYSSPRLWRGSPSLRVHGERNSSLSREWPYNAH 661
           PN QGKQFL  LR+FR +K++G G +H YS PR+WRGSP+LR  G+RN++ SRE P++  
Sbjct: 599 PNIQGKQFLSTLRNFRAQKLQGHGVKHVYSPPRVWRGSPNLRGPGDRNTAFSREMPHST- 657

Query: 662 GTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVTEQQQG 721
             G+ LGSLWLIDE+ RNHPYLLDWYYT++H  +  +TR      D P  P DVTEQ   
Sbjct: 658 -PGFHLGSLWLIDEDQRNHPYLLDWYYTTRHHTSTNNTR------DTPTIPLDVTEQHPD 710

Query: 722 DFWMP---TQNEARY-DQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRS 777
           D+WMP   TQNEARY D++W + Y DR+E+HL ASTS PFFRESVL  HDS+N A   RS
Sbjct: 711 DYWMPPNFTQNEARYDDEYWRNCYEDRTESHLGASTSTPFFRESVLHQHDSSNFAHSARS 770

Query: 778 HWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHKLSRTS 837
           HWWAR+ P  +QPQ+SFLEPPDFN + A  N  DNLSERS EEQEQ L W  S +LSRT+
Sbjct: 771 HWWARSGPPGSQPQASFLEPPDFNRF-ASHNYRDNLSERSSEEQEQPLDW-GSRRLSRTT 828

Query: 838 YI-DDLEAGSGDVNLHFDDIYNGKPPETP 865
           Y+ DDLEAG G++NLHFDD+Y+ +PPETP
Sbjct: 829 YMDDDLEAG-GNLNLHFDDVYS-RPPETP 855

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224066265\|ref\|XP_002302054.1\| predicted protein [Populus trichocarpa] gi\|222843780\|gb\|EEE81327.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224082790\|ref\|XP_002306839.1\| predicted protein [Populus trichocarpa] gi\|222856288\|gb\|EEE93835.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225437848\|ref\|XP_002263784.1\| PREDICTED: autophagy-related protein 9-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356503602\|ref\|XP_003520596.1\| PREDICTED: autophagy-related protein 9-like [Glycine max]	Back alignment and taxonomy information

>gi\|356545851\|ref\|XP_003541347.1\| PREDICTED: autophagy-related protein 9-like [Glycine max]	Back alignment and taxonomy information

>gi\|356570636\|ref\|XP_003553491.1\| PREDICTED: autophagy-related protein 9 [Glycine max]	Back alignment and taxonomy information

>gi\|297744125\|emb\|CBI37095.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356536827\|ref\|XP_003536935.1\| PREDICTED: autophagy-related protein 9-like [Glycine max]	Back alignment and taxonomy information

>gi\|449496947\|ref\|XP_004160271.1\| PREDICTED: LOW QUALITY PROTEIN: autophagy-related protein 9-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		874
TAIR\|locus:2042531		866	APG9 "autophagy 9" [Arabidopsi	0.959	0.968	0.646	1.4e-293
DICTYBASE\|DDB_G0285323		699	atg9 "autophagy protein 9" [Di	0.511	0.639	0.329	8e-89
POMBASE\|SPBC15D4.07c		702	atg9 "autophagy associated pro	0.490	0.611	0.298	1.4e-66
ZFIN\|ZDB-GENE-070209-65		846	atg9a "ATG9 autophagy related	0.649	0.671	0.270	2.6e-63
UNIPROTKB\|Q51WZ9		917	ATG9 "Autophagy-related protei	0.764	0.728	0.282	2.8e-62
UNIPROTKB\|Q3T904		839	ATG9A "Autophagy-related prote	0.632	0.659	0.272	2.4e-61
UNIPROTKB\|Q7Z3C6		839	ATG9A "Autophagy-related prote	0.632	0.659	0.274	5e-61
RGD\|1310450		839	Atg9a "autophagy related 9A" [	0.632	0.659	0.274	8.8e-61
UNIPROTKB\|F1SR84		871	ATG9A "Uncharacterized protein	0.632	0.634	0.272	6.8e-60
FB\|FBgn0034110		845	Atg9 "Autophagy-specific gene	0.593	0.614	0.288	8.9e-59

TAIR\|locus:2042531 APG9 "autophagy 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2819 (997.4 bits), Expect = 1.4e-293, P = 1.4e-293
 Identities = 571/883 (64%), Positives = 664/883 (75%)

Query:     1 MMFSGQRGANPLSVFRWKWRGDSS--LTTGLLNDVPPEIELSDYAHGRVPSPGSESPAGL 58
             MM SG +G N  + F+W+ RG+SS  LTTGLL++   EIELS+Y  G +PSPGSESP+GL
Sbjct:     1 MMSSGHKGPNVRNFFKWQ-RGESSSSLTTGLLHNESHEIELSNY--GGIPSPGSESPSGL 57

Query:    59 LNGESLNVAPIADLDLFFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDW 118
             LNGESLNV PIADLDLF ERLYSYY +KGL CII+KW VELLSLGF ICFS FFLL+VDW
Sbjct:    58 LNGESLNVQPIADLDLFVERLYSYYRDKGLWCIIVKWAVELLSLGFIICFSGFFLLYVDW 117

Query:   119 DGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLTLSKAVIVGYLALFSIYWIFCFLRF 178
             +GL+NAKCGMDAVESG KPCDL KEA+H HPL+P TL+ A+IVGYLALFS+YW+FCFLRF
Sbjct:   118 NGLQNAKCGMDAVESGTKPCDLVKEAIHPHPLSPFTLTTAIIVGYLALFSVYWLFCFLRF 177

Query:   179 FAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKXXXXXXXXXXXXXKDLSAHDVVMR 238
             FAQLKDTL  RHFYYN+LHVTD+EI TMPWAT+LEK             KDLSAHD+VMR
Sbjct:   178 FAQLKDTLDFRHFYYNNLHVTDNEILTMPWATVLEKVVQLQSSQCLCVVKDLSAHDMVMR 237

Query:   239 LMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQS 298
             LMRKENYLIGMLNKG+L+FPI  W+PGAGP V+   DG Q+ L+LTKTLEWTLNWCILQS
Sbjct:   238 LMRKENYLIGMLNKGLLSFPISHWIPGAGPAVKSAPDGTQYHLVLTKTLEWTLNWCILQS 297

Query:   299 MFDRNFCVRRDFVSNPKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTA 358
             MFD NF VRRDFVSNP TL+KRL VVGLA+LLLSPFLVIFM+VYLFLRHAEQFYNHPSTA
Sbjct:   298 MFDCNFRVRRDFVSNPTTLKKRLFVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTA 357

Query:   359 SSRRWSNLSKWMFREFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGF 418
             SSRRWSNLSKW+FREFNEVDHLFKHRINSSVVH+S+YLKQFPSPIISI+AKF+SFVSGGF
Sbjct:   358 SSRRWSNLSKWLFREFNEVDHLFKHRINSSVVHASEYLKQFPSPIISIIAKFVSFVSGGF 417

Query:   419 AAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQ 478
             AAVLIIIAFLEESLLEGHIFGRNL WYAAVFGTITAISRAA++DELLVLDP G MS+VVQ
Sbjct:   418 AAVLIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAISDELLVLDPVGTMSLVVQ 477

Query:   479 HTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIXXXXXXXXXXXXKRVDDILQ 538
             +THYMPKRWRGKEN + VR+E ET+FQYTGMMLLEE+ASI            KRVDDILQ
Sbjct:   478 NTHYMPKRWRGKENKDDVRLELETLFQYTGMMLLEEIASIFITPFLLMFVVPKRVDDILQ 537

Query:   539 FIADYTVDVEGVGHVCSFSTFDFQNHGNSNYGSPYH-TPRTQRSSQGKMEKSFLSFQSSY 597
             FI D+TVD+EGVGHVCSFS F F+NHGN  YGSP++ T R QRSSQGKMEKSFLSFQSSY
Sbjct:   538 FIKDFTVDIEGVGHVCSFSAFYFENHGNIKYGSPHNATRREQRSSQGKMEKSFLSFQSSY 597

Query:   598 PSWEPNAQGKQFLLNLRSFRERKVRGQGNRHAYSSP-RLWRGSPSLRVHGERNSSLSREW 656
             PSWE ++ GKQFL NLR+FR+RK+     RH  SSP R WR S +         +L R+ 
Sbjct:   598 PSWESDSLGKQFLSNLRTFRDRKLHEINTRH--SSPSRAWRESTN-------TPALYRDI 648

Query:   657 PYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVT 716
             P N   +G    S+WLID + RNHPYLLDWYYTSQ      H RT  H ++         
Sbjct:   649 PRNPLASGNHTDSMWLIDPDQRNHPYLLDWYYTSQ-----AHNRTD-HPIE-RANEILTA 701

Query:   717 EQQQGDFWMPTQNEARYDQ--FWDHDYGDRSETHLEAST--SAPFFRESVLQHHDSNNLA 772
              Q   D W P       D     + +     +   E+      P   +S    H  +   
Sbjct:   702 NQNATDCWPPDLGIRGEDSRDLLNMEASTSGQFFRESILRHDQPEGEDSYGSQHPLDG-- 759

Query:   773 QPTRSHWWARTSPHD---AQPQS--SFLEPPDF-NHYTAQTNVHDNLSERSLEEQ---EQ 823
                R+ WW R +      A P +  SF+EPPDF N YTA   + ++ S RS+EE+   E+
Sbjct:   760 ---RNQWWGRGNHSQISTAHPATTNSFIEPPDFINRYTAGNLLDNSWSRRSIEEEDEEEE 816

Query:   824 FLYWR-NSHK-LSRTSYIDDLEAGSGDVNLHFDDIYNGKPPET 864
              L W  N+ + LSRT+++DD +  +G ++LHFDD+Y+ +P ET
Sbjct:   817 ELDWEENARRNLSRTTFMDDNDIEAG-IDLHFDDVYSSRPQET 858

GO:0005634 "nucleus" evidence=ISM

GO:0006914 "autophagy" evidence=ISS;RCA;IMP

GO:0050832 "defense response to fungus" evidence=IEP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

DICTYBASE\|DDB_G0285323 atg9 "autophagy protein 9" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

POMBASE\|SPBC15D4.07c atg9 "autophagy associated protein Atg9" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070209-65 atg9a "ATG9 autophagy related 9 homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q51WZ9 ATG9 "Autophagy-related protein 9" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3T904 ATG9A "Autophagy-related protein 9A" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z3C6 ATG9A "Autophagy-related protein 9A" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

RGD\|1310450 Atg9a "autophagy related 9A" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SR84 ATG9A "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

FB\|FBgn0034110 Atg9 "Autophagy-specific gene 9" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_II0370	hypothetical protein (876 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		874
pfam04109		365	pfam04109, APG9, Autophagy protein Apg9	1e-165

>gnl\|CDD\|217900 pfam04109, APG9, Autophagy protein Apg9	Back alignment and domain information

 Score =  485 bits (1250), Expect = e-165
 Identities = 168/378 (44%), Positives = 243/378 (64%), Gaps = 22/378 (5%)

Query: 200 DSEIQTMPWATILEKVVQLQSSQQLCVVK-DLSAHDVVMRLMRKENYLIGMLNKGVLAFP 258
           D ++QT+ W  ++E++++LQ S  L   K  L AHD+  R+MRKENYLI ++NK +L   
Sbjct: 1   DDDLQTISWQEVVERIMELQDSNALTAHKKRLDAHDIANRIMRKENYLIALINKDILDLT 60

Query: 259 IYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSN----- 313
           +        P    G+     R  LTKTLEW LN C+   +FD N  +R++F+       
Sbjct: 61  L--------PLPFLGN-----RQFLTKTLEWNLNLCLFGFVFDENGQLRQEFLKESQRKQ 107

Query: 314 -PKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFR 372
             + LRKR +  G+  LLLSPF+VI+ V+Y F R+ E++  +P +  SR+WS  ++W FR
Sbjct: 108 LAQELRKRFLFAGILNLLLSPFIVIYFVLYYFFRYFEEYKKNPGSLGSRQWSPYARWKFR 167

Query: 373 EFNEVDHLFKHRINSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESL 432
           EFNE+ HLF+ R+N S   ++ YL QFPSP+++I+AKF+SF++G FAAVL+I+  L+E L
Sbjct: 168 EFNELPHLFQKRLNRSYPPANKYLDQFPSPLLAIVAKFVSFIAGSFAAVLVILTILDEEL 227

Query: 433 LEGHIF--GRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGK 490
             G     GR +L+Y  + GTI A+ R  + DE LV DPE  +  V+Q THY+P  WRGK
Sbjct: 228 FLGFEITPGRTVLFYITILGTIWAVCRGLIPDENLVFDPEALLREVIQFTHYLPSEWRGK 287

Query: 491 ENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGV 550
            +TE VR EF  +FQ   +++LEE+ S  LTP +L F +P   DDI+ F  ++TV V+G+
Sbjct: 288 AHTEEVRDEFCQLFQLKIVIILEELLSPILTPFILWFSLPPSSDDIIDFFREFTVHVDGL 347

Query: 551 GHVCSFSTFDFQNHGNSN 568
           G+VCSF+ FDF+ HGN N
Sbjct: 348 GYVCSFAMFDFKRHGNPN 365

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg9 plays a direct role in the formation of the cytoplasm to vacuole targeting and autophagic vesicles, possibly serving as a marker for a specialised compartment essential for these vesicle-mediated alternative targeting pathways. Length = 365

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		874
KOG2173		849	consensus Integral membrane protein [General funct	100.0
PF04109		370	APG9: Autophagy protein Apg9 ; InterPro: IPR007241	100.0
KOG2173		849	consensus Integral membrane protein [General funct	90.93

>KOG2173 consensus Integral membrane protein [General function prediction only]	Back alignment and domain information

Probab=100.00  E-value=9.7e-178  Score=1485.36  Aligned_cols=748  Identities=47%  Similarity=0.810  Sum_probs=624.3

Q ss_pred             eeeccc-cCCCCcccccccCCCCCccccccCCCCCCCC----------------CCCCCC--CCCCCCCCCCCCCCChHH
Q 002850           14 VFRWKW-RGDSSLTTGLLNDVPPEIELSDYAHGRVPSP----------------GSESPA--GLLNGESLNVAPIADLDL   74 (874)
Q Consensus        14 ~~~~~~-~~~~~~~~~~~~~~~pei~~~dy~~~~~p~~----------------~~~sp~--~~l~~e~~~w~~VeNLD~   74 (874)
                      ..+|.. .+.+++++|.+  ...|.|++.+   ..+++                .+.+|+  +...+++.+|.||.|||+
T Consensus        64 ss~~~l~~~s~~~~~~~~--l~se~~~~~~---g~dSp~~~k~~~h~f~~t~sl~~~~p~~~~~~~~~s~n~~Hi~nlD~  138 (849)
T KOG2173|consen   64 SSKWRLGEGSSSLTEGKL--LSSEEELSNE---GIDSPAPEKPETHYFQFTASLNNGSPSMAGLLNLESRNWQHIANLDS  138 (849)
T ss_pred             hhhhhcCCCccccccccc--cccccccccc---CCCCCCCCCCCccccccchhccCCCccccccccccccCCcchhhhHH
Confidence            567776 67778888875  3333333322   22221                455565  678899999999999999


Q ss_pred             HHHHHHHHHHhCCeehhhHHHHhhceeeeeeehhhhhhccccccccccccccCCcccccCCCCchhhhhhhccCCCccch
Q 002850           75 FFERLYSYYCEKGLRCIIIKWIVELLSLGFTICFSAFFLLFVDWDGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPLT  154 (874)
Q Consensus        75 Ff~~vY~Yy~~kGf~cIiL~~il~Llt~~FVv~FstFL~~CVDy~~L~~~~~~~~~~~~g~~~~d~~~e~i~~~~l~p~~  154 (874)
                      |+++||+||++|||||||++++++|++++|||+|+||+++||||++|++++|++++    .++|++++|+|+++|+-|..
T Consensus       139 f~s~vY~Yy~~~G~~CIIv~k~~qlLt~~FVi~fstF~~~CVd~~~L~~~~~~~~~----n~~k~~~~Daiv~~~~C~a~  214 (849)
T KOG2173|consen  139 FFSGVYSYYQGKGLWCIIVKKAFQLLTLGFVICFSTFFTHCVDWNGLFNATCGMDA----NKPKDLVGDAIVDKPLCPAN  214 (849)
T ss_pred             HHHhhHhhhcCCceEEEEHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccc----CcccccccceeccCCcCchh
Confidence            99999999999999999999999999999999999999999999999999998765    58999999999999766665


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCCCCCcccchHHHHHHHHHhhcccccccc-ccCCHH
Q 002850          155 LSKAVIVGYLALFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDSEIQTMPWATILEKVVQLQSSQQLCVV-KDLSAH  233 (874)
Q Consensus       155 ~~~~~~v~~Lvlfsiywi~~~ikf~~~L~~l~eIr~FY~~~L~IsD~eLqTIsW~eVV~rI~~lQ~~~~lci~-k~Ldah  233 (874)
                       ...+++.+|++|++||++|++|+++++++++|||+||.++|+|.|+||+|++|++|++|||++|+++.+||+ |+||||
T Consensus       215 -~T~it~~~l~lf~vy~l~~~ik~~~~I~k~seir~FY~~~L~IaD~elpt~tWq~V~~ri~~lq~~~~l~ihk~~lta~  293 (849)
T KOG2173|consen  215 -ITAITYFVLWLFSVYWLFRFIKFFADIKKLSEIRHFYYHALKIADDELPTLTWQEVLQRIVQLQKEQVLCIHKKRLTAH  293 (849)
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHHHhccEEEEecccCcHH
Confidence             345566678899999999999999999999999999999999999999999999999999999999999999 589999


Q ss_pred             HHHHHHhhhhchhhhhhccCCCCCCccccCCCCCCcccccCCCccceeecchhhhhhhhhhhcc---cccCCCcceeccc
Q 002850          234 DVVMRLMRKENYLIGMLNKGVLAFPIYSWVPGAGPTVRFGSDGVQHRLILTKTLEWTLNWCILQ---SMFDRNFCVRRDF  310 (874)
Q Consensus       234 DIanRIMRkENYLIAmiNK~IL~lpip~~lP~~Gp~~~~~~~g~k~~~~LtktLEWnL~~cI~~---~~Fd~~~~lr~~f  310 (874)
                      ||||||||||||||||+||+||++++|  +|+.| +           ..|||+||||++||+|.   ++|+++||||++|
T Consensus       294 dI~hRImR~eNYlialiNk~iL~~~f~--ip~~g-~-----------~~lt~~l~~ni~~~lf~~~~~~f~n~~~lr~e~  359 (849)
T KOG2173|consen  294 DIYHRIMRKENYLIALINKGILNLRFP--IPLLG-A-----------VPLTKTLEWNINLILFLGPTSVFTNNWQLRQEY  359 (849)
T ss_pred             HHHHHHHHhhhhhHHHhhcCccccccc--ccccc-c-----------eeccccCccceeEEEEcCCCcccccchhHHHHH
Confidence            999999999999999999999975555  45544 2           35899999999999999   9999999999999


Q ss_pred             ccC------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccchhhhhhhhcccchhhHHh
Q 002850          311 VSN------PKTLRKRLMVVGLAILLLSPFLVIFMVVYLFLRHAEQFYNHPSTASSRRWSNLSKWMFREFNEVDHLFKHR  384 (874)
Q Consensus       311 l~~------~~~LrkRf~~~GilNllLsPFIviy~lly~FFrYaee~k~~PsslgsRrWSp~ArWkfREFNELpH~f~~R  384 (874)
                      ++.      +++|||||+++|++|++||||+++|+++|+||||||++|++||++|+|+|||+|+|+|||||||+|+|++|
T Consensus       360 ~~~~qr~~~a~~Lkkr~i~~gllnlllaP~l~i~~v~~~ffrYan~l~~~PGal~tR~ws~~~~w~fRefNELdH~f~~R  439 (849)
T KOG2173|consen  360 KDPNQRVRLAEELKKRFIVAGLLNLLLAPFLVIYQVLYLFFRYANELKTEPGALGTRRWSPLARWLFREFNELDHEFKAR  439 (849)
T ss_pred             hCchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            763      57999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCchhHHHhhccCCchHHHHHHHHHHHHhhhHHHHHHHHHhcCcccccccccCchHHHHHHHHHHHHHhhcccccccc
Q 002850          385 INSSVVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDEL  464 (874)
Q Consensus       385 L~~Sy~~A~~YL~qFPs~~l~iIAkfVsFvaGS~~AVLiiLsllDe~lL~~~v~gRtlLwyitV~GtI~AvsRs~IpdE~  464 (874)
                      ||+||.+|++||+|||||+++++||+|+||+|||+|||++||++||++|..+..+++|+||+|+||+|+||||++||||+
T Consensus       440 iNrs~~~As~Y~~qFpsp~~~i~aK~vsFI~Gsf~avL~iltv~de~vl~v~hi~~dv~fylti~G~i~~VsR~~IpDE~  519 (849)
T KOG2173|consen  440 INRSYVYASKYVDQFPSPLLSIIAKNVSFISGSFLAVLIILTVFDEEVLQVEHITTDVFFYLTILGAIVAVSRSAIPDEN  519 (849)
T ss_pred             hhhhhHHHHHHHHhcCCHHHHHHHHHHHHHHhHHHHHHHHHHHhCHHHhhhhhhhhhHHHHHHHHhHHHHhhhcccCccc
Confidence            99999999999999999999999999999999999999999999999998666667799999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcCCCchhHHHHhhhcce
Q 002850          465 LVLDPEGAMSIVVQHTHYMPKRWRGKENTEMVRIEFETIFQYTGMMLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYT  544 (874)
Q Consensus       465 ~V~dPE~lm~~Vv~~THYlP~~WrG~aHT~eVr~EFs~LFq~K~v~fLeELlS~ilTPfIL~FsLp~~a~~IVDFfRefT  544 (874)
                      .|||||++|+.|++||||||++|||++|+.+||.|||+|||||+|++|+||+|||+|||||||+||+||++||||||+||
T Consensus       520 lVf~PE~lm~~v~~~tHYmP~~W~gkaH~~~Vr~EF~~Lfqyk~v~lL~Ei~S~~iTPfvL~F~lppra~~IvdFFrdfT  599 (849)
T KOG2173|consen  520 LVFDPEQLMTLVLAHTHYMPKEWRGKAHKTDVRLEFCQLFQYKIVFLLEEITSPFITPFVLIFVLPPRADDIVDFFRDFT  599 (849)
T ss_pred             eeecHHHHHHHHHHHhccCchhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcchheeeecCchHHHHHHHHHhce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCcccccccccccccCCCC-CCCCCCCCCCCcccccCChhHHHHhhhhhcCCCCCCChhhHHHHHHHHHHHHHhhhc
Q 002850          545 VDVEGVGHVCSFSTFDFQNHGN-SNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWEPNAQGKQFLLNLRSFRERKVRG  623 (874)
Q Consensus       545 V~VdGvG~VCSFA~FDf~rhGn-~~~~sp~~~~~~~rs~~GKME~S~l~F~~~yP~W~P~~~g~~fL~~L~~f~~~~~~~  623 (874)
                      |+|+|||||||||+|||++||| |.|.++        +++|||++|++.+.+.+|+|+-.+.||..|+.++-++-.    
T Consensus       600 v~V~GvG~vCsfaqf~~~~hgniPd~~~~--------~e~~e~t~s~~~~~s~~~s~~s~a~gk~~ls~~~~~r~~----  667 (849)
T KOG2173|consen  600 VDVEGVGYVCSFAQFNFRNHGNIPDWALA--------SEQGELTKSIVSQQSSYPSWESDALGKTELSLLRFFRID----  667 (849)
T ss_pred             eeeecccchhhHHHhhHhhcCCCcccccc--------chhhhhhhhhccccccCcchhhccCCCCcccccchhhcc----
Confidence            9999999999999999999999 777553        456999999999999999999999999999877666511    


Q ss_pred             ccCCCccCCCccccCCCCCCCCCCCcchhccccCCCCCCCCCCCCccccccCCCCCCCeeeeeeeccccCccCCCCcccc
Q 002850          624 QGNRHAYSSPRLWRGSPSLRVHGERNSSLSREWPYNAHGTGYQLGSLWLIDEEPRNHPYLLDWYYTSQHQQTAGHTRTHT  703 (874)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  703 (874)
                          +    +. |+..       |+.-.|.|.. ++---.|..-.+.|..|.||     ++||||+++-+.++..-  ..
T Consensus       668 ----n----p~-wq~~-------~~~~~f~~d~-r~~~l~~~~q~~~~~~~pn~-----~~ds~~~~~~s~r~~~~--~~  723 (849)
T KOG2173|consen  668 ----N----PE-WQMP-------QEAKAFLRDI-RNPLLSGLYQDSMWAADPNQ-----LLDSLYASQCSIRTDHP--IE  723 (849)
T ss_pred             ----C----cc-cccc-------cchhhhhccc-chhhhhhhhccchhhcCCcc-----ccchhhhccccccccCC--cc
Confidence                1    11 4432       3444566654 32223355558899999999     99999999987774331  01


Q ss_pred             ccCCCCCCCCcccccccCCCCCCCcchhhhccccccchhhhhhhhcccccchhhhhhhhccccCCCCCCCCccccccccc
Q 002850          704 HTLDIPPGPFDVTEQQQGDFWMPTQNEARYDQFWDHDYGDRSETHLEASTSAPFFRESVLQHHDSNNLAQPTRSHWWART  783 (874)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  783 (874)
                      ..    ..+|-+.   ..+.|++. +-+..+       .-++++.+++++++.||++        .+..     +     
T Consensus       724 r~----~~l~l~g---~~sl~pg~-~~isgg-------~~s~~n~~~~~~q~nf~~~--------~~~g-----q-----  770 (849)
T KOG2173|consen  724 RA----NELFLAG---ATSLWPGD-LGISGG-------DSSDLNNMEASTQGNFFRE--------GNHG-----Q-----  770 (849)
T ss_pred             cc----chhhhcc---ccccCCCC-CCCCCC-------Cchhccchhhhhhcccccc--------CCCC-----C-----
Confidence            11    1112111   34444431 111111       2356778899999999922        2221     1     


Q ss_pred             CCCCCCCCCcccCCCCCCCCccccccCCC-CCcCCHHH---HHhhhhcccc--cccccccchh--hhhccCCcccccccc
Q 002850          784 SPHDAQPQSSFLEPPDFNHYTAQTNVHDN-LSERSLEE---QEQFLYWRNS--HKLSRTSYID--DLEAGSGDVNLHFDD  855 (874)
Q Consensus       784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~  855 (874)
                       +.+.-...+|.+|||++|++.-+++-.+ .++++.++   .+..+.|-+.  +.+++|.++|  |.++|   -.+||+|
T Consensus       771 -~ap~vgtn~~~~~~dd~n~~~~~~~~ln~~~~~s~~ep~~e~~D~~~p~nS~~n~r~~l~p~~~~g~~~---e~~~~~d  846 (849)
T KOG2173|consen  771 -TAPPVGTNSFIEPPDDINRYTAGNLLLNSWSRRSIEEPDEEEEDLDWPENSRRNLRRTLFPDDNDGEAG---EDLHFDD  846 (849)
T ss_pred             -cCCCCCCCcccCCCcchhhhhHHHHHhHHHHHhccCCCcccccccCCcccccCCCCCCcCCCCcccccc---ceeeccc
Confidence             2223345789999999999844444332 33344433   2233355433  3488999999  66666   7899999


Q ss_pred             CCC
Q 002850          856 IYN  858 (874)
Q Consensus       856 ~~~  858 (874)
                      +++
T Consensus       847 v~~  849 (849)
T KOG2173|consen  847 VYS  849 (849)
T ss_pred             ccC
Confidence            975

>PF04109 APG9: Autophagy protein Apg9 ; InterPro: IPR007241 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>KOG2173 consensus Integral membrane protein [General function prediction only]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		874
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 58.3 bits (140), Expect = 1e-08
 Identities = 104/728 (14%), Positives = 201/728 (27%), Gaps = 240/728 (32%)

Query: 184 DT-LGIRHFYYNSL--HVTDSEIQTMPWATILEKVVQLQSSQQLCVVKD-LSAHDVVMRL 239
           D   G   + Y  +     D+ +       + +    + S ++   +   + + D V   
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE---IDHIIMSKDAVSGT 64

Query: 240 MRKENYLIGML----NKGVLAF------PIYSWVPGAGPTVRFGSDGVQHRLILTKTLEW 289
           +R    L   L     + V  F        Y ++          ++  Q  ++ T+    
Sbjct: 65  LR----LFWTLLSKQEEMVQKFVEEVLRINYKFL-----MSPIKTEQRQPSMM-TRMYIE 114

Query: 290 TLNWCILQSMFDRNFCVRRDFVSNPK---TLRKRLMVVGLAILLLSPFLVIF-MV----- 340
             +      +++ N    +  VS  +    LR+ L+      L  +  ++I  ++     
Sbjct: 115 QRD-----RLYNDNQVFAKYNVSRLQPYLKLRQALL-----ELRPAKNVLIDGVLGSGKT 164

Query: 341 -----VYLFLRHAEQFYNHPSTASSRRWSNLSKWM-FREFNEVDHLFK------HRINSS 388
                V L  +   +                  W+  +  N  + + +      ++I+ +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIF------------WLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 389 VVHSSDYLKQFPSPIISILAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLL----- 443
               SD+       I SI A+                      LL+   +   LL     
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAEL-------------------RRLLKSKPYENCLLVLLNV 253

Query: 444 WYAAV---FG---TITAISR-AAVTDELLVLDPEGAMSIVVQHTHYMPKRWRGKENTEMV 496
             A     F     I   +R   VTD    L       I + H            +  + 
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTD---FLSAATTTHISLDH-----------HSMTLT 299

Query: 497 RIEFETIF-QYTGM---MLLEEMASIFLTPLLLLFVVPKRVDDILQFIADYTVDVEGVGH 552
             E +++  +Y       L  E+ +    P  L  ++ + + D L               
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTT--NPRRLS-IIAESIRDGL--------------- 341

Query: 553 VCSFSTFDFQNHGNSNYGSPYHTPRTQRSSQGKMEKSFLSFQSSYPSWEPNAQGKQFLLN 612
               +T+D   H N +                K+       +SS    EP    ++    
Sbjct: 342 ----ATWDNWKHVNCD----------------KLTTII---ESSLNVLEPAEY-RKMFDR 377

Query: 613 LRSFRE-----RKVRGQGNRHAYSSPRLWRGS----PSLRVHGERNSSLSREWPYNAHGT 663
           L  F         +             +W         + V+     SL  + P  +   
Sbjct: 378 LSVFPPSAHIPTILLS----------LIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST-- 425

Query: 664 GYQLGSLWL-----IDEEPRNHPYLLDWYYTSQHQQTAGHTRTHTHTLDIPPGPFDVTEQ 718
              + S++L     ++ E   H  ++D Y   +   +           D+ P   D    
Sbjct: 426 -ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD----------DLIPPYLD---- 470

Query: 719 QQGDFWMPTQNEARYDQFWDHDYGDRSETHL---EASTSAPFFRESVLQHHDSNNLAQPT 775
               ++           +    +      HL   E       FR   L   D   L Q  
Sbjct: 471 ---QYF-----------YSHIGH------HLKNIEHPERMTLFRMVFL---DFRFLEQKI 507

Query: 776 R---SHWWARTSPHDAQPQSSFLEPPDFNHYTAQTNVHDNLSERSLEEQEQFLYWRNSHK 832
           R   + W A  S  +       L+      Y      +D   ER +     FL  +    
Sbjct: 508 RHDSTAWNASGSILNT------LQ--QLKFYKPYICDNDPKYERLVNAILDFLP-KIEEN 558

Query: 833 LSRTSYID 840
           L  + Y D
Sbjct: 559 LICSKYTD 566

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00