Citrus Sinensis ID: 002895
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 869 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZSM8 | 856 | Histone-lysine N-methyltr | yes | no | 0.924 | 0.938 | 0.585 | 0.0 | |
| Q8S4P4 | 895 | Histone-lysine N-methyltr | N/A | no | 0.926 | 0.899 | 0.530 | 0.0 | |
| P93831 | 902 | Histone-lysine N-methyltr | no | no | 0.934 | 0.900 | 0.470 | 0.0 | |
| Q8S4P6 | 931 | Histone-lysine N-methyltr | N/A | no | 0.920 | 0.859 | 0.461 | 0.0 | |
| Q8S4P5 | 894 | Histone-lysine N-methyltr | N/A | no | 0.414 | 0.402 | 0.765 | 1e-167 | |
| O65312 | 689 | Histone-lysine N-methyltr | no | no | 0.383 | 0.483 | 0.526 | 1e-105 | |
| Q28D84 | 748 | Histone-lysine N-methyltr | yes | no | 0.348 | 0.405 | 0.418 | 4e-67 | |
| Q98SM3 | 748 | Histone-lysine N-methyltr | N/A | no | 0.348 | 0.405 | 0.415 | 4e-67 | |
| Q61188 | 746 | Histone-lysine N-methyltr | yes | no | 0.348 | 0.406 | 0.424 | 7e-67 | |
| Q15910 | 746 | Histone-lysine N-methyltr | yes | no | 0.348 | 0.406 | 0.421 | 1e-66 |
| >sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana GN=EZA1 PE=2 SV=1 | Back alignment and function desciption |
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Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/859 (58%), Positives = 616/859 (71%), Gaps = 56/859 (6%)
Query: 30 KLNQLKKQVQAERVVSVKDKIEKNRKKIENDISQLLSTTSRKSVIFAMDNGFGNM----- 84
+L++LK+++Q ERV S+K+K E NRKK++ +S S S ++ A DNG NM
Sbjct: 35 RLSELKRKIQGERVRSIKEKFEANRKKVDAHVSPFSSAASSRAT--AEDNGNSNMLSSRM 92
Query: 85 --PLCKYSGFPQGLGDRDYVNSHEVVLSTSSKLSHVQKIPPYTTWIFLDKNQRMAEDQSV 142
PLCK +GF G+GDRDYV + +V+ S S KL ++IPPYTTWIFLD+NQRMAEDQSV
Sbjct: 93 RMPLCKLNGFSHGVGDRDYVPTKDVI-SASVKLPIAERIPPYTTWIFLDRNQRMAEDQSV 151
Query: 143 VGRRRIYYDQHGSEALVCSDSEEDIIEPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAV 202
VGRR+IYY+QHG E L+CSDSEE+ EEEK EFS+GED I+W + +E+G+GEEV +A+
Sbjct: 152 VGRRQIYYEQHGGETLICSDSEEEPEP-EEEKREFSEGEDSIIWLIGQEYGMGEEVQDAL 210
Query: 203 SQFIGIATSEVQDRYSTLKEKYDGKNLKEFEDAGHERGIALEKSLSAALDSFDNLFCRRC 262
Q + + S++ +RY+ LK K D +N +EF ++G + GI+LEK L AALDSFDNLFCRRC
Sbjct: 211 CQLLSVDASDILERYNELKLK-DKQNTEEFSNSGFKLGISLEKGLGAALDSFDNLFCRRC 269
Query: 263 LLFDCRLHGCSQTLINPSEKQPYWSEYEDDRKPCSNHCYLQSRAVQDTVEGSAGNISSII 322
L+FDCRLHGCSQ LI+ SEKQPYWS+YE DRKPCS HCYLQ +AV++ E + N +S
Sbjct: 270 LVFDCRLHGCSQPLISASEKQPYWSDYEGDRKPCSKHCYLQLKAVREVPE-TCSNFASKA 328
Query: 323 TNTEGTLLHCNA---EVPGAHSDIMAGERCNSKRVLPVTSEAVDSSEVAIGNENTDTSMQ 379
A +VP A + + S V+ +++ I N ++ + ++
Sbjct: 329 EEKASEEECSKAVSSDVPHAAASGV--------------SLQVEKTDIGIKNVDSSSGVE 374
Query: 380 S----LGKRKALELNDSVKVFDEIEESLNKKQKKLLPLDVLTASSDGIPRPDT---KSGH 432
GKR+ L DS + +L+ K++K D + + +P D +
Sbjct: 375 QEHGIRGKREVPILKDSNDL-----PNLSNKKQKTAASDTKMSFVNSVPSLDQALDSTKG 429
Query: 433 HVGAINDNELQMTSKNTIKKSVSAKVVSHNNIEHNIMDGAKDVNK--EPEMKQSFSKGEL 490
G DN++ S+ AK V ++++ DG + + + E+
Sbjct: 430 DQGGTTDNKVNRDSE------ADAKEVGEPIPDNSVHDGGSSICQPHHGSGNGAIIIAEM 483
Query: 491 PEGVLCSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHK 550
E S+EW PIEK+LYLKGVEIFGRNSCLIARNLLSGLKTC++VS YMR++ S+ +
Sbjct: 484 SETSRPSTEWNPIEKDLYLKGVEIFGRNSCLIARNLLSGLKTCLDVSNYMRENEVSVFRR 543
Query: 551 SVAPSSFLEETVKVDTDYAEQEMPARPRLLRRRGRARKLKYSWKSAGHPSIWKRIADGKN 610
S P+ L++ + D E+P R RL RR+G+ RKLKYS KSAGHPS+WKRIA GKN
Sbjct: 544 SSTPNLLLDDG-RTDPGNDNDEVPPRTRLFRRKGKTRKLKYSTKSAGHPSVWKRIAGGKN 602
Query: 611 QSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGYSFLRCSKSCKNRFRGCHCAKSQCRSR 670
QSCKQYTPCGC SMCGK CPCL N TCCEKYCG CSKSCKNRFRGCHCAKSQCRSR
Sbjct: 603 QSCKQYTPCGCLSMCGKDCPCLTNETCCEKYCG-----CSKSCKNRFRGCHCAKSQCRSR 657
Query: 671 QCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVA 730
QCPCFAAGRECDPDVCRNCWVSCGDGSLGE P+RG+GQCGNMRLLLRQQQRILL KSDVA
Sbjct: 658 QCPCFAAGRECDPDVCRNCWVSCGDGSLGEAPRRGEGQCGNMRLLLRQQQRILLGKSDVA 717
Query: 731 GWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGD 790
GWGAFLKNSVSKN+YLGEYTGELISH EADKRGKIYDRANSSFLFDLNDQYVLDA RKGD
Sbjct: 718 GWGAFLKNSVSKNEYLGEYTGELISHHEADKRGKIYDRANSSFLFDLNDQYVLDAQRKGD 777
Query: 791 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEG 850
KLKFANHS+ PNC+AKVM VAGDHRVGIFA E IEASEELFYDYRYGPDQAP WARKPEG
Sbjct: 778 KLKFANHSAKPNCYAKVMFVAGDHRVGIFANERIEASEELFYDYRYGPDQAPVWARKPEG 837
Query: 851 SKREDSSVSQGRAKKHQSH 869
SK++DS+++ RA+KHQSH
Sbjct: 838 SKKDDSAITHRRARKHQSH 856
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Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3 OS=Zea mays GN=EZ3 PE=2 SV=1 | Back alignment and function description |
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| >sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF OS=Arabidopsis thaliana GN=CLF PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8S4P6|EZ1_MAIZE Histone-lysine N-methyltransferase EZ1 OS=Zea mays GN=EZ1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8S4P5|EZ2_MAIZE Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65312|MEDEA_ARATH Histone-lysine N-methyltransferase MEDEA OS=Arabidopsis thaliana GN=MEA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q28D84|EZH2_XENTR Histone-lysine N-methyltransferase EZH2 OS=Xenopus tropicalis GN=ezh2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q98SM3|EZH2A_XENLA Histone-lysine N-methyltransferase EZH2 OS=Xenopus laevis GN=ezh2-a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q61188|EZH2_MOUSE Histone-lysine N-methyltransferase EZH2 OS=Mus musculus GN=Ezh2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 869 | ||||||
| 255548445 | 884 | enhancer of zeste, ezh, putative [Ricinu | 0.990 | 0.973 | 0.678 | 0.0 | |
| 224128312 | 812 | SET domain protein [Populus trichocarpa] | 0.925 | 0.990 | 0.702 | 0.0 | |
| 225437573 | 906 | PREDICTED: histone-lysine N-methyltransf | 0.993 | 0.952 | 0.677 | 0.0 | |
| 356501867 | 868 | PREDICTED: histone-lysine N-methyltransf | 0.962 | 0.963 | 0.618 | 0.0 | |
| 356534774 | 869 | PREDICTED: histone-lysine N-methyltransf | 0.960 | 0.960 | 0.616 | 0.0 | |
| 449515891 | 889 | PREDICTED: LOW QUALITY PROTEIN: histone- | 0.953 | 0.932 | 0.609 | 0.0 | |
| 449469026 | 889 | PREDICTED: histone-lysine N-methyltransf | 0.953 | 0.932 | 0.610 | 0.0 | |
| 357442237 | 829 | Histone-lysine N-methyltransferase EZA1 | 0.922 | 0.967 | 0.581 | 0.0 | |
| 34393752 | 814 | PHCLF3 [Petunia x hybrida] | 0.899 | 0.960 | 0.588 | 0.0 | |
| 350536471 | 829 | EZ1 protein [Solanum lycopersicum] gi|15 | 0.937 | 0.983 | 0.595 | 0.0 |
| >gi|255548445|ref|XP_002515279.1| enhancer of zeste, ezh, putative [Ricinus communis] gi|223545759|gb|EEF47263.1| enhancer of zeste, ezh, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1196 bits (3094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/892 (67%), Positives = 710/892 (79%), Gaps = 31/892 (3%)
Query: 1 MVSRASDSSSKSRKSYSEQSNDGLGNLTYKLNQLKKQVQAERVVSVKDKIEKNRKKIEND 60
M+S+++DS SK RKS+ EQSN+ +GNL+YK+N LKKQ+QAER+ S+K+K+E NRKK+E+D
Sbjct: 1 MLSKSTDSVSKLRKSHGEQSNECIGNLSYKMNLLKKQIQAERIFSIKEKVENNRKKLESD 60
Query: 61 ISQLLSTTSRKSVIFAMDNGFGNM--PLCKYSGFPQGLGDRDYVNSHEVVLSTSSKLSHV 118
++Q++ +SR + F + PLCKYSGF QG GD+DY+N HEV+ TS+K+ V
Sbjct: 61 VAQIMLASSRIDALNIGQTNFSRIGSPLCKYSGFAQGSGDKDYINGHEVIPWTSTKIPFV 120
Query: 119 QKIPPYTTWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSEEDIIEPEEEKHEFS 178
++IPPYTTWIFLD+NQRMAEDQSVVGRRRIYYDQ+G+EAL+CSDSEEDI EPEEEKH+FS
Sbjct: 121 ERIPPYTTWIFLDRNQRMAEDQSVVGRRRIYYDQNGNEALICSDSEEDIAEPEEEKHDFS 180
Query: 179 DGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEKYDG-KNLKEFEDAGH 237
+GEDRILW VF+EHGL EEV+N VSQFIG+ S++Q+R S LKE++D +N K+ D+
Sbjct: 181 EGEDRILWMVFQEHGLAEEVLNIVSQFIGVPISDIQERCSMLKERFDEEQNGKDSGDSAS 240
Query: 238 ERGIALEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQTLINPSEKQPYWSEYEDDRKPCS 297
E+GI+LEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQ LINPSEKQPYWSEYEDDRKPCS
Sbjct: 241 EKGISLEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQALINPSEKQPYWSEYEDDRKPCS 300
Query: 298 NHCYLQSRAVQDTVEGS---AGNISSIITNTEG--TLLHCNAEVPGAH---SDIMAGERC 349
+ C+L+ + V+D E S A N + EG T NA+ P +D+ +
Sbjct: 301 DQCFLRLKVVRDLPESSVNCALNRMKTASLEEGKKTAGASNAQEPSGADDGADLSKDDSY 360
Query: 350 NSKRVLPVTSEAVDSSEVAIGNENTDT-----SMQSLGKRKA-----LELNDSVKVFDEI 399
S++ + V S + SE + + N DT + + + KRK ++L+DS V ++
Sbjct: 361 ISQKEISVASGTLCHSEASEAS-NLDTCAMIHNQEHMRKRKEPELTNVDLDDSTPVPSDL 419
Query: 400 EESLNKKQKKLLPLDVLTASSDGIPRPDTKSGHHVGAINDNELQMTSKNTIKK--SVSAK 457
S NKKQK+LL D + + I D +G + +ELQ+T+KNT+ ++K
Sbjct: 420 HNSSNKKQKRLLGSDAASKDIENISSLDDLAGTE-KTTDTSELQITTKNTLNNPSEYASK 478
Query: 458 VVSHNNIEHNIMDGAKDVNKEPEMKQSFSKGELPEGVLCSSEWKPIEKELYLKGVEIFGR 517
+ + IE I+D A D K PE+ QS S EGVL S WKPIEKELYLKGVEIFG+
Sbjct: 479 EIVSSAIE-KILDEANDATKGPELIQSSSTDRQLEGVLSRSRWKPIEKELYLKGVEIFGK 537
Query: 518 NSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSSFLEETVKVDTDYAEQEMPARP 577
NSCLIARNLLSGLKTCMEVS YM DS ++PHKSVAPSS L++ K DTDY EQE+ R
Sbjct: 538 NSCLIARNLLSGLKTCMEVSNYMCDSGVTVPHKSVAPSSILDDNGKTDTDYTEQEISTRS 597
Query: 578 RLLRRRGRARKLKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC 637
RLLR+RGR RKLKYSWKSAGHP+ WKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC
Sbjct: 598 RLLRKRGRTRKLKYSWKSAGHPASWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC 657
Query: 638 CEKYCGYSFLRCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGS 697
CEKYCG CSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGD S
Sbjct: 658 CEKYCG-----CSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDSS 712
Query: 698 LGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHR 757
LGEPPKRGDGQCGNMRLLLRQQQRILLAKS++AGWGAFLKN V+KNDYLGEYTGELISHR
Sbjct: 713 LGEPPKRGDGQCGNMRLLLRQQQRILLAKSNIAGWGAFLKNPVNKNDYLGEYTGELISHR 772
Query: 758 EADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVG 817
EADKRGKIYDRANSSFLFDLN+QYVLDAYRKGDKLKFANHSSNPNC+AKVMLVAGDHRVG
Sbjct: 773 EADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVG 832
Query: 818 IFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSKREDSSVSQGRAKKHQSH 869
IFAKEHIEASEELFYDYRYGPDQAPAWARKPEGS+R++S+VSQGRAKKHQSH
Sbjct: 833 IFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSRRDESTVSQGRAKKHQSH 884
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128312|ref|XP_002320296.1| SET domain protein [Populus trichocarpa] gi|222861069|gb|EEE98611.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225437573|ref|XP_002270605.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356501867|ref|XP_003519745.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356534774|ref|XP_003535927.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449515891|ref|XP_004164981.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EZA1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449469026|ref|XP_004152222.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357442237|ref|XP_003591396.1| Histone-lysine N-methyltransferase EZA1 [Medicago truncatula] gi|355480444|gb|AES61647.1| Histone-lysine N-methyltransferase EZA1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|34393752|dbj|BAC84952.1| PHCLF3 [Petunia x hybrida] | Back alignment and taxonomy information |
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| >gi|350536471|ref|NP_001234760.1| EZ1 protein [Solanum lycopersicum] gi|156789072|gb|ABU96077.1| EZ1 [Solanum lycopersicum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 869 | ||||||
| TAIR|locus:2005501 | 902 | CLF "CURLY LEAF" [Arabidopsis | 0.850 | 0.819 | 0.471 | 6.3e-179 | |
| TAIR|locus:2132178 | 856 | SWN "SWINGER" [Arabidopsis tha | 0.563 | 0.572 | 0.598 | 3.1e-161 | |
| TAIR|locus:2196110 | 689 | MEA "MEDEA" [Arabidopsis thali | 0.298 | 0.375 | 0.554 | 2.8e-115 | |
| ZFIN|ZDB-GENE-050114-1 | 749 | ezh1 "enhancer of zeste homolo | 0.272 | 0.316 | 0.476 | 2.1e-78 | |
| UNIPROTKB|E1BD02 | 751 | EZH2 "Uncharacterized protein" | 0.265 | 0.307 | 0.481 | 2.9e-73 | |
| UNIPROTKB|E1C0W5 | 761 | EZH2 "Uncharacterized protein" | 0.265 | 0.303 | 0.481 | 1.6e-72 | |
| UNIPROTKB|E2R6Q2 | 751 | EZH2 "Uncharacterized protein" | 0.265 | 0.307 | 0.481 | 2e-72 | |
| UNIPROTKB|Q15910 | 746 | EZH2 "Histone-lysine N-methylt | 0.265 | 0.309 | 0.481 | 8.6e-72 | |
| UNIPROTKB|Q4R381 | 746 | EZH2 "Histone-lysine N-methylt | 0.265 | 0.309 | 0.481 | 8.6e-72 | |
| UNIPROTKB|I3L7H6 | 737 | EZH2 "Uncharacterized protein" | 0.265 | 0.313 | 0.481 | 1.1e-71 |
| TAIR|locus:2005501 CLF "CURLY LEAF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1737 (616.5 bits), Expect = 6.3e-179, P = 6.3e-179
Identities = 367/779 (47%), Positives = 485/779 (62%)
Query: 114 KLSHVQKIPPYTTWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALVCXXXXXXXXXXXXX 173
K+ ++++ PYTTW+FLD+NQRM EDQSVVGRRRIYYDQ G EAL+C
Sbjct: 135 KMPDIKRLSPYTTWVFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEEAIDDEEE 194
Query: 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEKYDGKNLKEFE 233
K +F + ED I+ E+ GL + V+ ++ F+ +TSE++ R+ L ++ K + E
Sbjct: 195 KRDFLEPEDYIIRMTLEQLGLSDSVLAELASFLSRSTSEIKARHGVLMKE---KEVSESG 251
Query: 234 DAGHERGIALEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQTLINPSEKQPYWSEYEDDR 293
D E + L K + ALDSFDNLFCRRCL+FDCRLHGCSQ LI P+EK W D+
Sbjct: 252 DNQAESSL-LNKDMEGALDSFDNLFCRRCLVFDCRLHGCSQDLIFPAEKPAPWCPPVDEN 310
Query: 294 KPCSNHCY---LQSRAVQD--TVEGSAGNISSIITNTEGTLLHCNAEVPGAHSDIMAGER 348
C +CY L+S T+EG G SS T+ T ++++ G E
Sbjct: 311 LTCGANCYKTLLKSGRFPGYGTIEGKTGT-SSDGAGTKTTPTKFSSKLNGRKPKTFPSES 369
Query: 349 CNSKRVLPV-TSEAVDSSEVAIGNENTDTS--MQSLGKRKALELNDSVKVFDEIEESLNK 405
+S + TS++ + + ++ +S ++ G+R + N + +V + + K
Sbjct: 370 ASSNEKCALETSDSENGLQQDTNSDKVSSSPKVKGSGRRVGRKRNKN-RVAERVPRKTQK 428
Query: 406 KQKKLLPLDVLTASSDGIPRPDTKSGHHVGAINDNELQMTSKNTIK--KSVSAKVVSHNN 463
+QKK D + +S D K + A + ++ + S N+ K K+ + VS+N+
Sbjct: 429 RQKKTEASDSDSIASGSCSPSDAKHKDNEDATSSSQKHVKSGNSGKSRKNGTPAEVSNNS 488
Query: 464 IEHNI-MDGAKDVNKE---PEMKQSFSK----GE-LPEGVLCSSE-WKPIEKELYLKGVE 513
++ ++ + + +V E P +S K GE + G L +++ W+P+EK L+ KGVE
Sbjct: 489 VKDDVPVCQSNEVASELDAPGSDESLRKEEFMGETVSRGRLATNKLWRPLEKSLFDKGVE 548
Query: 514 IFGRNSCLIARNLLSGLKTCMEVSTYM---RDSSSSMPHKSVAPSSFLEETVKVDTDYAE 570
IFG NSCLIARNLLSG K+C EV YM + +S + P ++ +
Sbjct: 549 IFGMNSCLIARNLLSGFKSCWEVFQYMTCSENKASFFGGDGLNPDG--SSKFDINGNMVN 606
Query: 571 QEMXXXXXXXXXXXXXXKLKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCP 630
++ +LKY+WKSA + SI KRI + K+Q C+Q+ PC C+ CGK+CP
Sbjct: 607 NQVRRRSRFLRRRGKVRRLKYTWKSAAYHSIRKRITEKKDQPCRQFNPCNCKIACGKECP 666
Query: 631 CLHNGTCCEKYCGYSFLRCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCW 690
CL NGTCCEKYCG C KSCKNRFRGCHCAKSQCRSRQCPCFAA RECDPDVCRNCW
Sbjct: 667 CLLNGTCCEKYCG-----CPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCW 721
Query: 691 VSCGDGSLGEPPKRGDG-QCGNMXXXXXXXXXXXXAKSDVAGWGAFLKNSVSKNDYLGEY 749
V GDGSLG P +RGD +C NM SDV+GWGAFLKNSVSK++YLGEY
Sbjct: 722 VIGGDGSLGVPSQRGDNYECRNMKLLLKQQQRVLLGISDVSGWGAFLKNSVSKHEYLGEY 781
Query: 750 TGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVML 809
TGELISH+EADKRGKIYDR N SFLF+LNDQ+VLDAYRKGDKLKFANHS PNC+AKV++
Sbjct: 782 TGELISHKEADKRGKIYDRENCSFLFNLNDQFVLDAYRKGDKLKFANHSPEPNCYAKVIM 841
Query: 810 VAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPE--GSKREDS-SVSQGRAKK 865
VAGDHRVGIFAKE I A EELFYDYRY PD+APAWA+KPE GSK++++ + S GR KK
Sbjct: 842 VAGDHRVGIFAKERILAGEELFYDYRYEPDRAPAWAKKPEAPGSKKDENVTPSVGRPKK 900
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| TAIR|locus:2132178 SWN "SWINGER" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2196110 MEA "MEDEA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050114-1 ezh1 "enhancer of zeste homolog 1 (Drosophila)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BD02 EZH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0W5 EZH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R6Q2 EZH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15910 EZH2 "Histone-lysine N-methyltransferase EZH2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4R381 EZH2 "Histone-lysine N-methyltransferase EZH2" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L7H6 EZH2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8S4P4 | EZ3_MAIZE | 2, ., 1, ., 1, ., 4, 3 | 0.5307 | 0.9263 | 0.8994 | N/A | no |
| Q9ZSM8 | EZA1_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.5855 | 0.9240 | 0.9380 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.946 |
| 3rd Layer | 2.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
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 |
 |
 |
 |
 |
 |
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|||
 | SDG913 | SubName- Full=Putative uncharacterized protein; (812 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | PGE901 | • | • | 0.613 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 869 | |||
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 5e-36 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 1e-24 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 1e-12 | |
| pfam03638 | 42 | pfam03638, CXC, Tesmin/TSO1-like CXC domain | 3e-04 |
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 5e-36
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 721 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDR--ANSSFLFDLN 778
++ + KS GWG + K +++GEY GE+I+ EA++R K YD A + +LFD++
Sbjct: 2 KLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDID 61
Query: 779 DQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 836
+DA RKG+ +F NHS PNC + V GD R+ IFA I+ EEL DY
Sbjct: 62 SDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDYGS 119
|
Putative methyl transferase, based on outlier plant homologues. Length = 124 |
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|202712 pfam03638, CXC, Tesmin/TSO1-like CXC domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 869 | |||
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 99.96 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.94 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.9 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.89 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.75 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.73 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.54 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.48 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.88 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.56 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 98.12 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 93.6 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 93.5 | |
| PF00249 | 48 | Myb_DNA-binding: Myb-like DNA-binding domain; Inte | 92.72 | |
| PF13921 | 60 | Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: | 92.26 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 92.12 | |
| smart00570 | 51 | AWS associated with SET domains. subdomain of PRES | 90.87 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 88.44 | |
| PF03638 | 42 | TCR: Tesmin/TSO1-like CXC domain, cysteine-rich do | 84.46 | |
| KOG1171 | 406 | consensus Metallothionein-like protein [Inorganic | 84.18 | |
| PF09111 | 118 | SLIDE: SLIDE; InterPro: IPR015195 The SLIDE domain | 81.67 |
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-126 Score=1067.48 Aligned_cols=687 Identities=36% Similarity=0.574 Sum_probs=540.0
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhccccchhhhccCCCC----Cc---CCccccCCCC
Q 002895 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEKNRKKIENDISQLLSTTSRKSVIFAMDNGFG----NM---PLCKYSGFPQ 94 (869)
Q Consensus 22 ~~~~~L~~~i~~LKkqi~~eR~~~ik~k~e~N~~~l~~~~~~l~~~~~~~~r~~~~~~~~~----~~---~l~~~~g~~~ 94 (869)
+.++.+...+..+|+ ++..++.+++++-..++.+...+|+-+- +++.+ ........+ .| |++++||+.+
T Consensus 37 ~~~e~i~~~~~E~k~-~~~~~~~~~~~~~~~~r~k~~~~~~~~~-~~~~~--~~i~~~n~~~~v~~~~~~~~~q~nfmv~ 112 (739)
T KOG1079|consen 37 DRLEKIKILNCEWKK-RRLKPVRSAKEVDGDIRVKVDLDTSIFD-FPSQK--SPINELNAVAQVPIMYSWPPLQQNFMVE 112 (739)
T ss_pred HHHHHHHHHHHHHhh-hhcccccccccccccccccccccccccc-Ccccc--cchhhhcccccccccccCChhhhcceec
Confidence 456666666666666 7788888888888888888888888774 55552 222222222 22 9999999999
Q ss_pred CCCCCCcccccccccccccccccCCCCCCCceeEEeeccccccccccccccceeeEeCCCCeEEEecCCccccCCCcccc
Q 002895 95 GLGDRDYVNSHEVVLSTSSKLSHVQKIPPYTTWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSEEDIIEPEEEK 174 (869)
Q Consensus 95 ~~~d~d~~~~~~v~~~~~iklp~v~klPpYTtWifldrNqrMaedqsvvgrrriYYD~~g~EalicSdseee~~e~eeek 174 (869)
+..+.+++..-++. +..||+|++|.|+|||+|||+||||||++||+|||+|+||| |.|||++| ||+||| ++++|||
T Consensus 113 ~~~~~~~ip~~~~~-v~~~k~~~ieel~~y~~~v~~dr~~~~~~d~v~ve~~~a~~-Q~~~e~dg-~D~~~e-~~~~~ek 188 (739)
T KOG1079|consen 113 DETVLHNIPYMGDE-VLDIKGPFIEELIKYDGKVHGDRNQRFMEDQVFVELVVALY-QYGGEHDG-SDDEEE-EVLEEEK 188 (739)
T ss_pred ccceeccccccccc-ccccccchhhhcccccceeeccccccchhhhhHHHHHHHHH-hcCCcccc-CCCccc-cchhhhc
Confidence 99999988877754 67899999999999999999999999999999999999999 99999999 999999 8889999
Q ss_pred ccCCcccch-hhhhHhhhcCChHHHHHHHHHHhc--CCcHHHHHHHHHhHhhcCCCCCccccccccccccchhhh-hhHH
Q 002895 175 HEFSDGEDR-ILWTVFEEHGLGEEVINAVSQFIG--IATSEVQDRYSTLKEKYDGKNLKEFEDAGHERGIALEKS-LSAA 250 (869)
Q Consensus 175 ~~f~~~ed~-~~~~~~~e~g~sd~v~~~l~~~~~--~~~sei~eRy~~L~~k~~~~~~~~~~~~~~~~~~~~~k~-l~~a 250 (869)
++|.+++|. ++|++.+.++++++||.+|+++|. ++++||+|||.+|+++..+...+...+.+++. +.+++. ++++
T Consensus 189 r~~~e~~~~~~~~~~~~~~~~~~~if~~~~~~f~~k~~~~~lke~~~~l~~~~~p~~~e~~~~~~id~-~~ae~~~r~~~ 267 (739)
T KOG1079|consen 189 RDFLEGEDDDIIESINKLSFPADKIFQAISSMFPDKLTASELKERYGELTSKSLPVAEEPECTPNIDG-SSAEPVQREQA 267 (739)
T ss_pred ccccCcccchhhHhhhhhccchHHHHHHHhhhcccccchhhhhHHHhhhhhccccccCCcccccCCCc-cccChHHHHhh
Confidence 999999999 899999999999999999999995 99999999999999986655555555444544 445555 9999
Q ss_pred hhcccccccccccccccCCcCcCCCCCCCCCCCCCCCCCCCCCCCCccchhhhhccccccccCcCCCccccccccccccc
Q 002895 251 LDSFDNLFCRRCLLFDCRLHGCSQTLINPSEKQPYWSEYEDDRKPCSNHCYLQSRAVQDTVEGSAGNISSIITNTEGTLL 330 (869)
Q Consensus 251 ldsFdnlFCRRClvfDC~lHgcsq~li~~~ekq~~~~~~~~d~~PCg~~Cyl~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 330 (869)
|||||||||||||+|||+||| +|.++||.++.-.|.++..+..|||+.||.++.+......... .+
T Consensus 268 l~sF~tlfCrrCl~ydC~lHg-~~~~~~pn~~~r~e~~~a~~~~pc~p~~~~~l~~~~~~~m~~~---------~~---- 333 (739)
T KOG1079|consen 268 LHSFHTLFCRRCLKYDCFLHG-SQFHAFPNTKKRKEDEPALENEPCGPGCYGLLEGAKEKTMSAV---------VS---- 333 (739)
T ss_pred hcccccceeeeeeeeeccccC-ccccccccccccCCCCccccccCCCCchhhhhhccchhhhhcc---------cc----
Confidence 999999999999999999999 9999999999999999999999999999999866543311000 00
Q ss_pred cCCCCCCCCCCccccccccCcccccccccccccchhhhcCCCCCccchhhhccccccccccccchhhHHHHHHHHhhhhc
Q 002895 331 HCNAEVPGAHSDIMAGERCNSKRVLPVTSEAVDSSEVAIGNENTDTSMQSLGKRKALELNDSVKVFDEIEESLNKKQKKL 410 (869)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~k~~~~~~~~s~~~~~~~~~~~~~~~~~~ 410 (869)
..+.+. + .++|+..
T Consensus 334 ----~~~p~~-----g---------------------------------------------------------~~~qk~~ 347 (739)
T KOG1079|consen 334 ----KCPPIR-----G---------------------------------------------------------DIRQKLV 347 (739)
T ss_pred ----cCCCCc-----c---------------------------------------------------------hhhhhhc
Confidence 000000 0 0112211
Q ss_pred cCccccccCCCCCCCCCCCCCCcccccccccccccccc--ccccccccccccccccccccccCCccCCCCcccccCCCCC
Q 002895 411 LPLDVLTASSDGIPRPDTKSGHHVGAINDNELQMTSKN--TIKKSVSAKVVSHNNIEHNIMDGAKDVNKEPEMKQSFSKG 488 (869)
Q Consensus 411 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (869)
-.+++++ ..+.. ..++....+...+..+. ..+.. ...++.........+.+.......
T Consensus 348 ~~~~~~s-------~~~~~--~~e~~g~~~d~~v~~~~~~~~~~v---------~~~~~~~~s~~~~~c~~~~~~~~~-- 407 (739)
T KOG1079|consen 348 KASSMDS-------DDEHV--EEEDKGHDDDDGVPRGFGGSVNFV---------GEDDTSTHSSTNSICQNPVHGKKD-- 407 (739)
T ss_pred ccccCCc-------chhhc--cccccCcccccccccccccccccc---------cCCcccccccccccccCcccccCC--
Confidence 1111111 00000 00000000001110000 00000 001111111112222222111110
Q ss_pred CCccccccCCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHhhcCCCCCCCCCCCCccccccccccchh
Q 002895 489 ELPEGVLCSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSSFLEETVKVDTDY 568 (869)
Q Consensus 489 ~~~~~~~~~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (869)
...+|+++|+.||++|+.+||.|+|+|||+|+ +|||++||+||..+..... +.. +. ..
T Consensus 408 -------~~~ew~~~ek~~fr~~~~~~~~n~c~Iar~l~--~ktC~~v~~~~~~e~~~~~--------~~~--~~--~~- 465 (739)
T KOG1079|consen 408 -------TNVEWNGAEKVLFRVGSTLYGTNRCSIARNLL--TKTCRQVYEYEQKEVLQGL--------YFD--GR--FR- 465 (739)
T ss_pred -------cccccchhhhHHHHhccccccchhhHHHHHhc--chHHHHHHHHhhcchhhce--------ecc--cc--cc-
Confidence 24689999999999999999999999999995 5999999999997653211 110 00 00
Q ss_pred hhhcCCCchhHHhhhccccccccccCCCCCcchhhhhccCCCCCCcCcccCCCCCC--CCCCCcccCCCccccCCCcccc
Q 002895 569 AEQEMPARPRLLRRRGRARKLKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSM--CGKQCPCLHNGTCCEKYCGYSF 646 (869)
Q Consensus 569 ~~~~~~~r~r~~r~~gr~rklk~~~~s~~~p~~~kri~~~k~~~~~~y~PC~c~~~--C~~~C~C~~~g~~Cek~Cg~~~ 646 (869)
.....+.|+|.+|+.|+.|++.+.|+++.|+.+|. |+||+|+++ |+.+|+|+.++++||+||+
T Consensus 466 ~~~~~~~r~~~~r~~g~~r~k~q~kk~~~~~~v~~------------~qpC~hp~~c~c~~~C~C~~n~~~CEk~C~--- 530 (739)
T KOG1079|consen 466 VELPGPKRARKLRLWGRHRRKIQNKKDSRHTVVWN------------YQPCDHPGPCNCGVGCPCIDNETFCEKFCY--- 530 (739)
T ss_pred cccCcchhhHHHHhhhhHHHhhhcccccCCceeee------------cCcccCCCCCCCCCCCcccccCcchhhccc---
Confidence 11234556888999999999999999999877765 666666644 4689999999999999999
Q ss_pred ccCchhhhhccCCcccCCCCccCCCcccccccCccCcccCcCccCCCCCCCCCCCCCCCCC-CCCchHHhhcccCcEEEE
Q 002895 647 LRCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDG-QCGNMRLLLRQQQRILLA 725 (869)
Q Consensus 647 ~~C~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~-~C~Nr~lqrg~~k~l~V~ 725 (869)
|+.+|.|||+||+| +++|++.+|||+++.|||||++|..||.. +..+++. +|+|+.+|++++++++|+
T Consensus 531 --C~~dC~nrF~GC~C-k~QC~tkqCpC~~A~rECdPd~Cl~cg~~--------~~~d~~~~~C~N~~l~~~~qkr~lla 599 (739)
T KOG1079|consen 531 --CSPDCRNRFPGCRC-KAQCNTKQCPCYLAVRECDPDVCLMCGNV--------DHFDSSKISCKNTNLQRGEQKRVLLA 599 (739)
T ss_pred --CCHHHHhcCCCCCc-ccccccCcCchhhhccccCchHHhccCcc--------cccccCccccccchhhhhhhcceeec
Confidence 99999999999999 99999999999999999999999999851 2333444 999999999999999999
Q ss_pred EcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEeccccCCccccccCCCCCCcce
Q 002895 726 KSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFA 805 (869)
Q Consensus 726 kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAtr~GN~aRFINHSC~PNc~~ 805 (869)
.|.+.|||||+++.+.|++||.||+||+|+++||++|+++|+..+.+|+|+|+.+++|||+++||.+||+|||-+|||++
T Consensus 600 pSdVaGwGlFlKe~v~KnefisEY~GE~IS~dEADrRGkiYDr~~cSflFnln~dyviDs~rkGnk~rFANHS~nPNCYA 679 (739)
T KOG1079|consen 600 PSDVAGWGLFLKESVSKNEFISEYTGEIISHDEADRRGKIYDRYMCSFLFNLNNDYVIDSTRKGNKIRFANHSFNPNCYA 679 (739)
T ss_pred hhhccccceeeccccCCCceeeeecceeccchhhhhcccccccccceeeeeccccceEeeeeecchhhhccCCCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCeeEEEEEEecCCCCCCeEEEecCCCCCCCCcccCCCCCCCCCCCCCccccccc
Q 002895 806 KVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSKREDSSVSQGRAKK 865 (869)
Q Consensus 806 ~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~d~~pcwC~~p~~~k~de~~~s~gra~k 865 (869)
.+++|+|++||||||+|+|.+||||||||+|++++++.|-+.+.++++++....+.+++|
T Consensus 680 kvm~V~GdhRIGifAkRaIeagEELffDYrYs~~~~~k~~~~~~~s~k~e~~~~q~~~~~ 739 (739)
T KOG1079|consen 680 KVMMVAGDHRIGIFAKRAIEAGEELFFDYRYSPEHALKFVGIERESYKVELKIFQATQQK 739 (739)
T ss_pred EEEEecCCcceeeeehhhcccCceeeeeeccCccccccccccCccccccchhhhhhhcCC
Confidence 999999999999999999999999999999999999999999999999998888887765
|
|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins | Back alignment and domain information |
|---|
| >PF13921 Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: 1A5J_A 1MBH_A 1GV5_A 1H89_C 1IDY_A 1MBK_A 1IDZ_A 1H88_C 1GVD_A 1MBG_A | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >smart00570 AWS associated with SET domains | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >PF03638 TCR: Tesmin/TSO1-like CXC domain, cysteine-rich domain; InterPro: IPR005172 This entry includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C | Back alignment and domain information |
|---|
| >KOG1171 consensus Metallothionein-like protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF09111 SLIDE: SLIDE; InterPro: IPR015195 The SLIDE domain adopts a secondary structure comprising a main core of three alpha-helices | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 869 | ||||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 7e-16 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 2e-14 | ||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 1e-13 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 2e-13 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 6e-13 | ||
| 2o8j_A | 281 | Human Euchromatic Histone Methyltransferase 2 Lengt | 2e-10 | ||
| 3k5k_A | 283 | Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin | 2e-10 | ||
| 1mvh_A | 299 | Structure Of The Set Domain Histone Lysine Methyltr | 4e-10 | ||
| 3hna_A | 287 | Crystal Structure Of Catalytic Domain Of Human Euch | 9e-10 | ||
| 2igq_A | 285 | Human Euchromatic Histone Methyltransferase 1 Lengt | 9e-10 | ||
| 3fpd_A | 261 | G9a-Like Protein Lysine Methyltransferase Inhibitio | 1e-09 | ||
| 3bo5_A | 290 | Crystal Structure Of Methyltransferase Domain Of Hu | 4e-09 | ||
| 4i51_A | 286 | Methyltransferase Domain Of Human Euchromatic Histo | 5e-09 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 6e-08 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 1e-07 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 1e-07 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-07 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-07 | ||
| 1ml9_A | 302 | Structure Of The Neurospora Set Domain Protein Dim- | 9e-06 | ||
| 1xqh_A | 264 | Crystal Structure Of A Ternary Complex Of The Methy | 7e-04 | ||
| 3cbm_A | 256 | Set79-Er-Adomet Complex Length = 256 | 7e-04 | ||
| 1o9s_A | 259 | Crystal Structure Of A Ternary Complex Of The Human | 8e-04 | ||
| 2f69_A | 261 | Ternary Complex Of Set79 BOUND TO ADOHCY AND A TAF1 | 8e-04 | ||
| 4e47_A | 264 | Set79 IN COMPLEX WITH INHIBITOR (R)-(3-(3-Cyanophen | 8e-04 | ||
| 3m54_A | 261 | Set79 Y305F IN COMPLEX WITH TAF10 PEPTIDE AND ADOHC | 8e-04 |
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
|
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 | Back alignment and structure |
| >pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 | Back alignment and structure |
| >pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 | Back alignment and structure |
| >pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 | Back alignment and structure |
| >pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 | Back alignment and structure |
| >pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 | Back alignment and structure |
| >pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 | Back alignment and structure |
| >pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 | Back alignment and structure |
| >pdb|1XQH|A Chain A, Crystal Structure Of A Ternary Complex Of The Methyltransferase Set9 (Also Known As Set79) WITH A P53 Peptide And Sah Length = 264 | Back alignment and structure |
| >pdb|3CBM|A Chain A, Set79-Er-Adomet Complex Length = 256 | Back alignment and structure |
| >pdb|1O9S|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Set79 Length = 259 | Back alignment and structure |
| >pdb|2F69|A Chain A, Ternary Complex Of Set79 BOUND TO ADOHCY AND A TAF10 Peptide Length = 261 | Back alignment and structure |
| >pdb|4E47|A Chain A, Set79 IN COMPLEX WITH INHIBITOR (R)-(3-(3-Cyanophenyl)-1-Oxo-1- (Pyrrolidin-1-Yl)propan-2-Yl)-1,2,3, 4-Tetrahydroisoquinoline-6- Sulfonamide And S-Adenosylmethionine Length = 264 | Back alignment and structure |
| >pdb|3M54|A Chain A, Set79 Y305F IN COMPLEX WITH TAF10 PEPTIDE AND ADOHCY Length = 261 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 2e-44
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 33/223 (14%)
Query: 653 CKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRN--------------CWVSCGDGSL 698
+ F GC C K+ C C C G D + C C V C
Sbjct: 55 TQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSD- 113
Query: 699 GEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHRE 758
C N + Q + K+ GWG + K ++ EY GE++ E
Sbjct: 114 ---------HCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSE 164
Query: 759 ADKRGKIYDRANSSFLFDLNDQ--------YVLDAYRKGDKLKFANHSSNPNCFAKVMLV 810
+R + +++S+++ + + +D G+ +F NHS PN + +
Sbjct: 165 VQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRI 224
Query: 811 AGD-HRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSK 852
++ +FA + I EEL YDY A K
Sbjct: 225 DSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDH 267
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143 | Back alignment and structure |
|---|
| >3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A Length = 551 | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
| >1ulk_A Lectin-C; chitin-binding protein, hevein domain, PL-C, sugar binding protein; 1.80A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 g.3.1.1 Length = 126 | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 869 | |||
| 3bo5_A | 290 | Histone-lysine N-methyltransferase setmar; SET dom | 100.0 | |
| 3ooi_A | 232 | Histone-lysine N-methyltransferase, H3 lysine-36 l | 100.0 | |
| 3ope_A | 222 | Probable histone-lysine N-methyltransferase ASH1L; | 100.0 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 100.0 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 100.0 | |
| 3hna_A | 287 | Histone-lysine N-methyltransferase, H3 lysine-9 sp | 100.0 | |
| 1ml9_A | 302 | Histone H3 methyltransferase DIM-5; adoMet-depende | 100.0 | |
| 2r3a_A | 300 | Histone-lysine N-methyltransferase SUV39H2; histon | 100.0 | |
| 2w5y_A | 192 | Histone-lysine N-methyltransferase HRX; transcript | 100.0 | |
| 3f9x_A | 166 | Histone-lysine N-methyltransferase SETD8; methyltr | 99.97 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.95 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.93 | |
| 1n3j_A | 119 | A612L, histone H3 lysine methyltransferase; beta b | 99.92 | |
| 2qpw_A | 149 | PR domain zinc finger protein 2; methyltransferase | 99.92 | |
| 3s8p_A | 273 | Histone-lysine N-methyltransferase SUV420H1; SET d | 99.86 | |
| 3rq4_A | 247 | Histone-lysine N-methyltransferase SUV420H2; suppr | 99.81 | |
| 3ep0_A | 170 | PR domain zinc finger protein 12; PR domain-contai | 99.78 | |
| 3db5_A | 151 | PR domain zinc finger protein 4; methyltransferase | 99.75 | |
| 3dal_A | 196 | PR domain zinc finger protein 1; methyltransferase | 99.73 | |
| 3ray_A | 237 | PR domain-containing protein 11; structural genomi | 99.56 | |
| 3ihx_A | 152 | PR domain zinc finger protein 10; PRDM10, methyltr | 99.51 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.19 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.16 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.0 | |
| 2llk_A | 73 | Cyclin-D-binding MYB-like transcription factor 1; | 96.36 | |
| 3qxy_A | 449 | N-lysine methyltransferase SETD6; epigenetics, pro | 96.05 | |
| 2h21_A | 440 | Ribulose-1,5 bisphosphate carboxylase/oxygenase; S | 95.95 | |
| 2cqr_A | 73 | RSGI RUH-043, DNAJ homolog subfamily C member 1; m | 95.64 | |
| 2yqk_A | 63 | Arginine-glutamic acid dipeptide repeats protein; | 95.15 | |
| 2lr8_A | 70 | CAsp8-associated protein 2; structural genomics, n | 94.04 | |
| 2eqr_A | 61 | N-COR1, N-COR, nuclear receptor corepressor 1; SAN | 94.65 | |
| 3smt_A | 497 | Histone-lysine N-methyltransferase SETD3; histone | 94.5 | |
| 2crg_A | 70 | Metastasis associated protein MTA3; transcription | 94.46 | |
| 2cu7_A | 72 | KIAA1915 protein; nuclear protein, SANT domain, DN | 94.42 | |
| 2yum_A | 75 | ZZZ3 protein, zinc finger ZZ-type-containing prote | 93.97 | |
| 2din_A | 66 | Cell division cycle 5-like protein; MYB_DNA-bindin | 93.81 | |
| 1x41_A | 60 | Transcriptional adaptor 2-like, isoform B; transcr | 93.64 | |
| 3sjm_A | 64 | Telomeric repeat-binding factor 2; human telomeric | 93.36 | |
| 2d9a_A | 60 | B-MYB, MYB-related protein B; DNA binding, structu | 93.24 | |
| 1guu_A | 52 | C-MYB, MYB proto-oncogene protein; transcription, | 93.17 | |
| 2elk_A | 58 | SPCC24B10.08C protein; hypothetical protein, struc | 93.03 | |
| 2cjj_A | 93 | Radialis; plant development, DNA-binding protein, | 92.35 | |
| 2cqq_A | 72 | RSGI RUH-037, DNAJ homolog subfamily C member 1; m | 92.35 | |
| 2iw5_B | 235 | Protein corest, REST corepressor 1; oxidoreductase | 92.26 | |
| 1ug2_A | 95 | 2610100B20RIK gene product; hypothetical protein, | 91.83 | |
| 1w0t_A | 53 | Telomeric repeat binding factor 1; telomere, DNA-b | 91.4 | |
| 2k9n_A | 107 | MYB24; R2R3 domain, DNA-binding, nucleus, DNA bind | 90.96 | |
| 3osg_A | 126 | MYB21; transcription-DNA complex, MYB2, R2R3 domai | 90.82 | |
| 4a69_C | 94 | Nuclear receptor corepressor 2; transcription, hyd | 90.65 | |
| 1gvd_A | 52 | MYB proto-oncogene protein; transcription, transcr | 90.58 | |
| 1gv2_A | 105 | C-MYB, MYB proto-oncogene protein; transcription, | 90.22 | |
| 2yus_A | 79 | SWI/SNF-related matrix-associated actin- dependent | 89.35 | |
| 2yus_A | 79 | SWI/SNF-related matrix-associated actin- dependent | 88.05 | |
| 2cu7_A | 72 | KIAA1915 protein; nuclear protein, SANT domain, DN | 88.01 | |
| 1x41_A | 60 | Transcriptional adaptor 2-like, isoform B; transcr | 87.84 | |
| 2dim_A | 70 | Cell division cycle 5-like protein; MYB_DNA-bindin | 87.7 | |
| 1ity_A | 69 | TRF1; helix-turn-helix, telomeres, DNA binding, MY | 87.18 | |
| 2ltp_A | 89 | Nuclear receptor corepressor 2; SMRT, TRAC, SGC, s | 87.03 | |
| 1h8a_C | 128 | AMV V-MYB, MYB transforming protein; transcription | 87.04 | |
| 2elk_A | 58 | SPCC24B10.08C protein; hypothetical protein, struc | 85.67 | |
| 2yum_A | 75 | ZZZ3 protein, zinc finger ZZ-type-containing prote | 85.61 | |
| 2k9n_A | 107 | MYB24; R2R3 domain, DNA-binding, nucleus, DNA bind | 84.57 | |
| 2xag_B | 482 | REST corepressor 1; amine oxidase, chromatin regul | 84.12 | |
| 3zqc_A | 131 | MYB3; transcription-DNA complex, DNA-binding prote | 83.85 | |
| 1gv2_A | 105 | C-MYB, MYB proto-oncogene protein; transcription, | 83.74 | |
| 1guu_A | 52 | C-MYB, MYB proto-oncogene protein; transcription, | 83.66 | |
| 1h89_C | 159 | C-MYB, MYB proto-oncogene protein; transcription/D | 81.77 | |
| 2d9a_A | 60 | B-MYB, MYB-related protein B; DNA binding, structu | 81.1 | |
| 1h8a_C | 128 | AMV V-MYB, MYB transforming protein; transcription | 80.46 | |
| 3osg_A | 126 | MYB21; transcription-DNA complex, MYB2, R2R3 domai | 80.35 |
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=357.04 Aligned_cols=192 Identities=24% Similarity=0.488 Sum_probs=169.6
Q ss_pred hhccCCcccCCCCccCCCcccccccCccCcccCc--------------CccCCCCCCCCCCCCCCCCCCCCchHHhhccc
Q 002895 654 KNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCR--------------NCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQ 719 (869)
Q Consensus 654 ~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~--------------~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg~~ 719 (869)
.++|+||.|..+.|.+..|+|++.+.+|+++.|. +|+..|++ ...|.|+.+|++..
T Consensus 56 ~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C----------~~~C~Nr~~q~g~~ 125 (290)
T 3bo5_A 56 QITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRC----------SDHCRNRVVQKGLQ 125 (290)
T ss_dssp SCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCS----------CTTCTTCCGGGCCC
T ss_pred cccCCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCC----------CCCCCCeEcccCCc
Confidence 4678999998889999999999999999998875 45555544 36999999999999
Q ss_pred CcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCC--------cEEEeccccCCc
Q 002895 720 QRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND--------QYVLDAYRKGDK 791 (869)
Q Consensus 720 k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~--------~~~IDAtr~GN~ 791 (869)
.+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+....+|+|.+.. +++|||+.+||+
T Consensus 126 ~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~ 205 (290)
T 3bo5_A 126 FHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNI 205 (290)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----EEEEEEEEEEECG
T ss_pred ccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCccceeEEeeeecCCc
Confidence 999999999999999999999999999999999999999999988887777889997753 378999999999
Q ss_pred cccccCCCCCCcceeEEEECC-eeEEEEEEecCCCCCCeEEEecCCCC----------------CCCCcccCCCCCCCCC
Q 002895 792 LKFANHSSNPNCFAKVMLVAG-DHRVGIFAKEHIEASEELFYDYRYGP----------------DQAPAWARKPEGSKRE 854 (869)
Q Consensus 792 aRFINHSC~PNc~~~~v~v~G-~~RI~ifA~RDI~aGEELTfDYgy~~----------------d~~pcwC~~p~~~k~d 854 (869)
+|||||||+|||.++.|.+++ .++|+|||+|||++||||||||++.. ...+|+||.++|++.-
T Consensus 206 arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l 285 (290)
T 3bo5_A 206 GRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFL 285 (290)
T ss_dssp GGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBC
T ss_pred hheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCccC
Confidence 999999999999998888876 58999999999999999999998542 2468999999998654
Q ss_pred C
Q 002895 855 D 855 (869)
Q Consensus 855 e 855 (869)
.
T Consensus 286 ~ 286 (290)
T 3bo5_A 286 P 286 (290)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
| >2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* | Back alignment and structure |
|---|
| >2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* | Back alignment and structure |
|---|
| >2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} | Back alignment and structure |
|---|
| >2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1 | Back alignment and structure |
|---|
| >3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A | Back alignment and structure |
|---|
| >2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A | Back alignment and structure |
|---|
| >2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B* | Back alignment and structure |
|---|
| >1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A | Back alignment and structure |
|---|
| >2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A | Back alignment and structure |
|---|
| >3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A | Back alignment and structure |
|---|
| >4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A | Back alignment and structure |
|---|
| >1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A | Back alignment and structure |
|---|
| >1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A | Back alignment and structure |
|---|
| >2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1 | Back alignment and structure |
|---|
| >2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A | Back alignment and structure |
|---|
| >2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3 | Back alignment and structure |
|---|
| >2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A | Back alignment and structure |
|---|
| >2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B* | Back alignment and structure |
|---|
| >3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis} | Back alignment and structure |
|---|
| >1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A | Back alignment and structure |
|---|
| >1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A | Back alignment and structure |
|---|
| >1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C | Back alignment and structure |
|---|
| >2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3 | Back alignment and structure |
|---|
| >3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 869 | ||||
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 2e-34 | |
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 1e-30 | |
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 6e-27 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 3e-13 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 131 bits (329), Expect = 2e-34
Identities = 56/224 (25%), Positives = 82/224 (36%), Gaps = 29/224 (12%)
Query: 630 PCLHNGTCCEKYCGYSFLRCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGR--ECDPDVCR 687
P +G C G C + +R C C A GR V
Sbjct: 62 PNFQSGCNCSSLGG-----CDLNNPSR---CECLDDLDEPTHFAYDAQGRVRADTGAVIY 113
Query: 688 NCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLG 747
C C +C N + + + + K+ GWG ++
Sbjct: 114 ECNSFCSCSM----------ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFIT 163
Query: 748 EYTGELISHREADKRGKIYDRANSSFLFDL-----NDQYVLDAYRKGDKLKFANHSSNPN 802
Y GE+I+ EA KR K YD ++LFDL +Y +DA GD +F NHS +PN
Sbjct: 164 CYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPN 223
Query: 803 CFAKVMLVAGD----HRVGIFAKEHIEASEELFYDYRYGPDQAP 842
+ + + FA + I+ EEL +DY D +P
Sbjct: 224 IAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSP 267
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 869 | |||
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 100.0 | |
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 100.0 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.92 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.86 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 97.97 | |
| d1ug2a_ | 95 | 2610100b20rik gene product {Mouse (Mus musculus) [ | 96.14 | |
| d2crga1 | 57 | Metastasis associated protein MTA3 {Mouse (Mus mus | 96.07 | |
| d2cqra1 | 60 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 95.63 | |
| d1guua_ | 50 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 95.51 | |
| d1gv2a2 | 47 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 94.92 | |
| d1w0ua_ | 55 | Telomeric repeat binding factor 2, TRF2 {Human (Ho | 94.65 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 94.52 | |
| d2cjja1 | 63 | Radialis {Garden snapdragon (Antirrhinum majus) [T | 93.66 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 93.46 | |
| d1xc5a1 | 68 | Nuclear receptor corepressor 2 {Human (Homo sapien | 92.8 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 92.39 | |
| d1gvda_ | 52 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 91.88 | |
| d1w0ta_ | 52 | DNA-binding domain of human telomeric protein, hTR | 91.72 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 91.32 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 89.63 | |
| d2cqqa1 | 59 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 88.06 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 87.98 | |
| d1igna1 | 86 | DNA-binding domain of rap1 {Baker's yeast (Sacchar | 87.48 | |
| d1gvda_ | 52 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 83.76 | |
| d1xc5a1 | 68 | Nuclear receptor corepressor 2 {Human (Homo sapien | 81.05 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.5e-38 Score=334.58 Aligned_cols=137 Identities=31% Similarity=0.480 Sum_probs=128.5
Q ss_pred CCCCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCC-----CcE
Q 002895 707 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN-----DQY 781 (869)
Q Consensus 707 ~~C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~-----~~~ 781 (869)
..|.|+.+|++.+.+|+|++++.+||||||+++|++|+||+||+||||+..++++|.+.|+....+|+|.+. ..+
T Consensus 123 ~~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~~~~~~~l~~~~~~~~~ 202 (269)
T d1mvha_ 123 MECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEY 202 (269)
T ss_dssp TTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCE
T ss_pred CCCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcCCcchhheecccccccc
Confidence 489999999999999999999999999999999999999999999999999999999999988888988764 468
Q ss_pred EEeccccCCccccccCCCCCCcceeEEEECCe----eEEEEEEecCCCCCCeEEEecCCCCCCCCc
Q 002895 782 VLDAYRKGDKLKFANHSSNPNCFAKVMLVAGD----HRVGIFAKEHIEASEELFYDYRYGPDQAPA 843 (869)
Q Consensus 782 ~IDAtr~GN~aRFINHSC~PNc~~~~v~v~G~----~RI~ifA~RDI~aGEELTfDYgy~~d~~pc 843 (869)
+|||+..||++|||||||+|||.++.|++++. ++|+|||+|||++||||||||||..+.+|.
T Consensus 203 ~iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d~~P~ 268 (269)
T d1mvha_ 203 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPV 268 (269)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCC
T ss_pred eeeeeecCcceEEeecCCCCCcEEEEEEecCCcCccceEEEEECCccCCCCEEEEecCCCcCCCCC
Confidence 99999999999999999999999999998753 789999999999999999999999887764
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} | Back information, alignment and structure |
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| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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