Citrus Sinensis ID: 002922
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 865 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SMX9 | 881 | Squamosa promoter-binding | yes | no | 0.864 | 0.849 | 0.506 | 0.0 | |
| Q9S7P5 | 927 | Squamosa promoter-binding | no | no | 0.891 | 0.831 | 0.494 | 0.0 | |
| Q75LH6 | 969 | Squamosa promoter-binding | yes | no | 0.909 | 0.812 | 0.430 | 1e-180 | |
| Q9LGU7 | 862 | Squamosa promoter-binding | no | no | 0.634 | 0.636 | 0.428 | 1e-124 | |
| Q8RY95 | 1035 | Squamosa promoter-binding | no | no | 0.944 | 0.789 | 0.316 | 2e-96 | |
| Q6Z8M8 | 1140 | Squamosa promoter-binding | no | no | 0.639 | 0.485 | 0.336 | 2e-86 | |
| A2YX04 | 1140 | Squamosa promoter-binding | N/A | no | 0.639 | 0.485 | 0.336 | 2e-86 | |
| Q700C2 | 988 | Squamosa promoter-binding | no | no | 0.625 | 0.547 | 0.310 | 2e-67 | |
| Q6I576 | 842 | Squamosa promoter-binding | no | no | 0.420 | 0.432 | 0.252 | 2e-26 | |
| Q8S9G8 | 801 | Squamosa promoter-binding | no | no | 0.289 | 0.312 | 0.274 | 2e-24 |
| >sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/869 (50%), Positives = 556/869 (63%), Gaps = 121/869 (13%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKAT A VG ++QRFCQQCSRFH+LQEFDEGKRSCRRRLAGHNKRRRKT+P+ NG
Sbjct: 130 MHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGN 189
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
+D+ SS+YLLI+LL+ILSNMH + T DQDL+SHL ++L G +NL LL
Sbjct: 190 P-SDDHSSNYLLITLLKILSNMH----NHTGDQDLMSHLLKSLVSHAGEQLGKNLVELL- 243
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
L G S G++ IG
Sbjct: 244 -----LQGGGSQGSLN-------------------------IG----------------- 256
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
N A G QA + ++ F +R +A N E + KM++ DLN++Y
Sbjct: 257 ---------NSALLGIEQA--PQEELKQFSARQDGTATENRSEK---QVKMNDFDLNDIY 302
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
DS + +E S P NP SL P W+H +SSPPQ S NSDS S QS SSSS +
Sbjct: 303 IDSDD--TDVERSPPPTNPATSSLDYPSWIH----QSSPPQTSRNSDSASDQSPSSSSED 356
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPT 360
AQ RT RIVFKLFGK+PN+FP+VLR QILDWLSHSPTD+ESYIRPGCIVLTIYLR +
Sbjct: 357 AQMRTGRIVFKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGCIVLTIYLRQAETA 416
Query: 361 WEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCR 420
WEEL DLG SL +LL+ SDD W TGW+Y RVQ+ +AF+YNGQVV+DT L LKS
Sbjct: 417 WEELSDDLGFSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNGQVVVDTSLSLKSRDYSH 476
Query: 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYD-LMGGADTVNEND 479
I S+KP+A+ +E+ +F VKG NL + TRLLC++EG YL+QET +D D +N
Sbjct: 477 IISVKPLAIAATEKAQFTVKGMNLRQRGTRLLCSVEGKYLIQETTHDSTTREDDDFKDNS 536
Query: 480 EL-QCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAE-QEVCSEICMLESAIEAAEIS 537
E+ +C++F C +P + GRGF+E+ED GLSSSF PF+V E +VCSEI +LE+ +E
Sbjct: 537 EIVECVNFSCDMPILSGRGFMEIEDQGLSSSFFPFLVVEDDDVCSEIRILETTLEFT--- 593
Query: 538 DDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSME 597
T+ QA+DF+HE+GWLLHRS L G PN FP RF+WL+EFSM+
Sbjct: 594 --------GTDSAKQAMDFIHEIGWLLHRSKL----GESDPNPGVFPLIRFQWLIEFSMD 641
Query: 598 HDWCAVVKKLLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVELLLNYAPDN 656
+WCAV++KLL + FDG V G+ +SS A L E+ LLH+AVR+N +PMVE+LL Y P
Sbjct: 642 REWCAVIRKLLNMFFDGAV--GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIP-- 697
Query: 657 VLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI 716
+ +F+P+ GPAGLTPLH+AA +D +E+VLDALT+DP VGI
Sbjct: 698 --------------KQQRNSLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGI 743
Query: 717 EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQK 776
EAWK+ +DSTG TP DYA LR H SYIHL+QRKINKKS+ V+++IP S D + K+
Sbjct: 744 EAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKE- 802
Query: 777 PLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCV 836
P G +S + ++ Q C+LC+ K+ Y R S+ YRP MLSMVAIAAVCV
Sbjct: 803 PKSGPMASAL----------EITQIPCKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCV 852
Query: 837 CVALLFKSSPEVLYIFRPFRWELLKYGSS 865
CVALLFKS PEVLY+F+PFRWELL YG+S
Sbjct: 853 CVALLFKSCPEVLYVFQPFRWELLDYGTS 881
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9S7P5|SPL12_ARATH Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/871 (49%), Positives = 556/871 (63%), Gaps = 100/871 (11%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
+HSKAT ALVG +MQRFCQQCSRFHVL+EFDEGKRSCRRRLAGHNKRRRK +PD + NG
Sbjct: 151 IHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDTIGNGT 210
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
S++D+++S+Y+LI+LL+IL S++ N + G ++ LS LL+
Sbjct: 211 SMSDDQTSNYMLITLLKIL-----------------SNIHSNQSDQTGDQDL--LSHLLK 251
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
+ AG G +LV S IG + S+ Q P
Sbjct: 252 SL--VSQAGEHIGR-----NLVGLLQGGGGLQAS-----QNIGNLSALLSLEQ---APRE 296
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
D+ K S ++ V A SA + + P RS K N + DLN++Y
Sbjct: 297 DI--KHHSVSETPWQEVYANSAQERVA--PDRSEKQVKVN------------DFDLNDIY 340
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASA-NSDSTSSQSQSSSSG 299
DS + + S P NP SL H S +SSPPQ S NSDS S QS SSSSG
Sbjct: 341 IDSDDTTDIERSSPPPTNPATSSLD----YHQDSRQSSPPQTSRRNSDSASDQSPSSSSG 396
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
+AQSRTDRIVFKLFGK+PNDFP+ LR QIL+WL+H+PTD+ESYIRPGCIVLTIYLR +
Sbjct: 397 DAQSRTDRIVFKLFGKEPNDFPVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEA 456
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
+WEELCCDL SLRRLL+ SDD W GWLY RVQ+ +AF +NGQVVLDT L L+SH
Sbjct: 457 SWEELCCDLSFSLRRLLDLSDDPLWTDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYS 516
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
+I +++P+A V+++ +F VKG NL R TRLLC +EG++LVQE M D + EN+
Sbjct: 517 QIITVRPLA--VTKKAQFTVKGINLRRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENN 574
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDH-GLSSSFVPFIVAEQE-VCSEICMLESAIEAAEIS 537
E+ ++F C +P GRGF+E+ED GLSSSF PFIV+E E +CSEI LES +E
Sbjct: 575 EIDFVNFSCEMPIASGRGFMEIEDQGGLSSSFFPFIVSEDEDICSEIRRLESTLEFT--- 631
Query: 538 DDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHL-HPNFYFFPFKRFKWLLEFSM 596
T+ QA+DF+HE+GWLLHRS LK R+ H F RFK+L+EFSM
Sbjct: 632 --------GTDSAMQAMDFIHEIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSM 683
Query: 597 EHDWCAVVKKLLGILF-DGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPD 655
+ +WC V+KKLL ILF +GTVD S + A+ E+ LLH+AVR+N +PMVE+LL ++P
Sbjct: 684 DREWCCVMKKLLNILFEEGTVD----PSPDAALSELCLLHRAVRKNSKPMVEMLLRFSP- 738
Query: 656 NVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVG 715
+K+ AG +F+P+ GP GLTPLH+AA +D +E+VLDALT+DPG G
Sbjct: 739 ---------KKKNQTLAG---LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTG 786
Query: 716 IEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQ 775
I+AWK+++D+TG TP DYA LR H SYIHLVQRK+++K V+++IP S + + KQ
Sbjct: 787 IQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESF-NIEHKQ 845
Query: 776 KPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQK-VAYRNMRSSLVYRPVMLSMVAIAAV 834
+ SS SL+ +I QC+LC+ K V S+ YRP MLSMVAIAAV
Sbjct: 846 EKRSPMDSS---SLEITQIN------QCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAV 896
Query: 835 CVCVALLFKSSPEVLYIFRPFRWELLKYGSS 865
CVCVALLFKS PEVLY+F+PFRWELL+YG+S
Sbjct: 897 CVCVALLFKSCPEVLYVFQPFRWELLEYGTS 927
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 633 bits (1633), Expect = e-180, Method: Compositional matrix adjust.
Identities = 374/868 (43%), Positives = 516/868 (59%), Gaps = 81/868 (9%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MH+KAT A+VGN +QRFCQQCSRFH LQEFDEGKRSCRRRLAGHN+RRRKT P+ V G
Sbjct: 176 MHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPEVAVGGS 235
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
+ +++ SSYLL+ LL + +N++++N++ + Q+L+S L RNL V + + + L LL+
Sbjct: 236 AFTEDKISSYLLLGLLGVCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKLLE 295
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTG-PEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPA 179
Q + + G + G E LV+T E + PS S P + QCG
Sbjct: 296 ACQSMQD-GSNAGTSETANALVNTAVAEAAGPSNSKM----------PFVNGDQCGL--- 341
Query: 180 SDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNV 239
AS S+ S+S A + P F + DLN+
Sbjct: 342 ----------------------ASSSVVPVQSKSPTVATPDPPACKF-----KDFDLNDT 374
Query: 240 YDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG 299
Y + + E S P S P W+H S +S PPQ S NSDSTS+QS SSS+G
Sbjct: 375 YGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQS-PPQTSGNSDSTSAQSLSSSNG 433
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
+AQ RTD+IVFKLF K P+D P VLR QIL WLS SPTDIESYIRPGCI+LT+YLRL +
Sbjct: 434 DAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPGCIILTVYLRLVES 493
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
W+EL ++ S L +LL S FW +G ++ V+H +AF++NGQ++LD PL +H C
Sbjct: 494 AWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLMLDRPLANSAHHYC 553
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
+I ++PIA P S +V F V+G NL ++RL+C+ EGS + QE +++ D V E+D
Sbjct: 554 KILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQEDTDNIV---DDV-EHD 609
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDD 539
+++ L+F C +P+ GRGF+EVED G S+ F PFI+AEQ++CSE+C LES E++
Sbjct: 610 DIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSEVCELESIFESSS---- 665
Query: 540 FQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHD 599
+ A+ +NQAL+FL+E+GWLLHR+++ + + F RF+ L F+ME +
Sbjct: 666 -HEQADDDNARNQALEFLNELGWLLHRANIISKQDKVP--LASFNIWRFRNLGIFAMERE 722
Query: 600 WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659
WCAV K LL LF G VD G + E+ +L LLH AVR MV LL Y P+ L
Sbjct: 723 WCAVTKLLLDFLFTGLVDIGSQSPEEV-VLSENLLHAAVRMKSAQMVRFLLGYKPNESL- 780
Query: 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719
R F+F+P+ GP+ TPLH+AA DDAE+VLDALT+DPG VGI W
Sbjct: 781 ----------KRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTW 830
Query: 720 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPL- 778
++A+D G TP DYA R + +Y+++V++KINK + G V+L +P SI P+
Sbjct: 831 RNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGK-GHVVLGVPSSI-------HPVI 882
Query: 779 -KGNKSSRVLSLQTEKITTKVMQQQCRLC-EQKVAYRNMRS-SLVYRPVMLSMVAIAAVC 835
G K V SL+ +T C C Q + Y N + + +YRP ML+++ IA +C
Sbjct: 883 TDGVKPGEV-SLEI-GMTVPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVIC 940
Query: 836 VCVALLFKSSPEVLYIFRPFRWELLKYG 863
VCV LL + P+V Y FRWELL+ G
Sbjct: 941 VCVGLLLHTCPKV-YAAPTFRWELLERG 967
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9LGU7|SPL1_ORYSJ Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/567 (42%), Positives = 338/567 (59%), Gaps = 18/567 (3%)
Query: 302 QSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTW 361
++RTD+IVFKLFGK+PNDFP LR QIL WLS+ P+DIESYIRPGCI+LTIY+RL W
Sbjct: 307 ENRTDKIVFKLFGKEPNDFPSDLRAQILSWLSNCPSDIESYIRPGCIILTIYMRLPNWMW 366
Query: 362 EELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRI 421
++L D +++L+ S D WRTGW+YARVQ + NG ++L +P +I
Sbjct: 367 DKLAADPAHWIQKLISLSTDTLWRTGWMYARVQDYLTLSCNGNLMLASPWQPAIGNKHQI 426
Query: 422 SSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDEL 481
I PIAV S F VKG N+++ TT+LLC G YL+QE L+ D
Sbjct: 427 LFITPIAVACSSTANFSVKGLNIAQPTTKLLCIFGGKYLIQEATEKLL---DDTKMQRGP 483
Query: 482 QCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDFQ 541
QCL+F CS P+ GRGFIEVED SS PF+VAE++VCSEI LE + D
Sbjct: 484 QCLTFSCSFPSTSGRGFIEVEDLDQSSLSFPFVVAEEDVCSEIRTLEHLLNLVSFDDTLV 543
Query: 542 KIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWC 601
+ + +++AL+FLHE GW L RSH++ FP RF+WLL F+++ ++C
Sbjct: 544 EKNDLLASRDRALNFLHEFGWFLQRSHIRATSETPKDCTEGFPAARFRWLLSFAVDREFC 603
Query: 602 AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-LDK 660
AV+KKLL LF G VD ++ E +L+ L+ AV + +P+++ LL Y + +D
Sbjct: 604 AVIKKLLDTLFQGGVDLDVQSTVEF-VLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPMDG 662
Query: 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 720
S A + F+F P++ GP+ +TPLH+AA D VLDALTDDP +GI+AWK
Sbjct: 663 TES-------AAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWK 715
Query: 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 780
+A+D+TGLTP DYA R H SYI +VQ KI+ + ++ + + D +K
Sbjct: 716 NARDATGLTPEDYARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTT-DFTEKHASQ 774
Query: 781 NKSSRVLSLQTEK---ITTKVMQQQCRLCEQKVAYR-NMRSSLVYRPVMLSMVAIAAVCV 836
+K++ + EK I+TK CR C ++AYR ++ L RP +LS+VAIAAVCV
Sbjct: 775 SKTTDQTAFDVEKGQQISTKP-PLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCV 833
Query: 837 CVALLFKSSPEVLYIFRPFRWELLKYG 863
CV L+ + P + + PFRW L+ G
Sbjct: 834 CVGLIMQGPPHIGGMRGPFRWNSLRSG 860
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 354 bits (909), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 297/938 (31%), Positives = 454/938 (48%), Gaps = 121/938 (12%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRK-THPDNVVNG 59
+HSKATKALVG MQRFCQQCSRFH+L EFDEGKRSCRRRLAGHN+RRRK T P+ V +G
Sbjct: 144 VHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASG 203
Query: 60 -------GSLNDERSSSYLLISLLRILSNMHSNN-------SDQTKDQDLLSHLFRNLAG 105
+ N+ +++ L++LL L+ N S D++ L + +
Sbjct: 204 VVVPGNHDTTNNTANANMDLMALLTALACAQGKNAVKPPVGSPAVPDREQLLQILNKINA 263
Query: 106 V------------VGTSNVRNLSGLLQGSQGLLN-AGPSNGNVEKVPDLVSTGPEPSRPS 152
+ +G+ +N+ Q +N A PS ++ V +ST S P
Sbjct: 264 LPLPMDLVSKLNNIGSLARKNMDHPTVNPQNDMNGASPSTMDLLAV---LSTTLGSSSPD 320
Query: 153 TSACMTDNRIGFSEPMRSVGQCGTVPASDLLQKKISTNDAHSG----------------R 196
A ++ G + ++ + L+K+ + G R
Sbjct: 321 ALAILSQGGFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGERSSSSNQSPSQDSDSR 380
Query: 197 VQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVYDDSQERV----EHLEL 252
Q +S S+++F +S + P R S+ N V D S E L
Sbjct: 381 GQDTRSSLSLQLF---TSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSSPVMQELFPL 437
Query: 253 SHAP--------VNPGPVSLYSPLWLHPGSNKSSPP-------QASANSDSTSSQSQSSS 297
+P N P + PL L SN+ + Q S + S S S S
Sbjct: 438 QASPETMRSKNHKNSSPRTGCLPLELFGASNRGAADPNFKGFGQQSGYASSGSDYSPPSL 497
Query: 298 SGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLG 357
+ +AQ RT +IVFKL KDP+ P LR +I +WLS+ P+++ESYIRPGC+VL++Y+ +
Sbjct: 498 NSDAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMS 557
Query: 358 KPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHK 417
WE+L L L LL+ S FWR +A NG+V ++
Sbjct: 558 PAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKS--WRTWN 615
Query: 418 SCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNE 477
S + S+ P+AV E VV+G +L+ + C GSY+ E + T+
Sbjct: 616 SPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVC--RQTI-- 671
Query: 478 NDELQCLSFPCSI--PNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICML--ESAIEA 533
DEL SF P GR FIEVE+ SF P I+A +C E+ L E ++
Sbjct: 672 FDELNVNSFKVQNVHPGFLGRCFIEVENGFRGDSF-PLIIANASICKELNRLGEEFHPKS 730
Query: 534 AEISDDFQKIAEKTEV-KNQALDFLHEMGWLLHR---SHLKFRVGHLHPNFYFFPFKRFK 589
+++++ + + + + + L FL+E+GWL + S L+ + F RFK
Sbjct: 731 QDMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKNQTSELREQSD--------FSLARFK 782
Query: 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVEL 648
+LL S+E D+CA+++ LL +L + + + L +L E+ LL++AV+R MVEL
Sbjct: 783 FLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVEL 842
Query: 649 LLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708
L++Y N L SR+ F+F PN+ GP G+TPLH+AAC +++++D LT
Sbjct: 843 LIHYLV-NPLTLSSSRK----------FVFLPNITGPGGITPLHLAACTSGSDDMIDLLT 891
Query: 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSI 768
+DP +G+ +W + +D+TG TP YA++R +H+Y LV RK+ K ++ +V L+I +
Sbjct: 892 NDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNK--QVSLNIEHEV 949
Query: 769 VDWD--SKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVML 826
VD SK+ L+ NKS S T ++ Q R+ + L P++
Sbjct: 950 VDQTGLSKRLSLEMNKS----SSSCASCATVALKYQRRVSGSQ--------RLFPTPIIH 997
Query: 827 SMVAIAAVCVCVALLFKSSPEVLYIFRPFRWELLKYGS 864
SM+A+A VCVCV + + P ++ F W L YGS
Sbjct: 998 SMLAVATVCVCVCVFMHAFP-IVRQGSHFSWGGLDYGS 1034
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6Z8M8|SPL15_ORYSJ Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 319/606 (52%), Gaps = 53/606 (8%)
Query: 278 SPP----QASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLS 333
SPP Q+ S S S S S+S+ + Q RT RI+FKLFGK+P+ P LR +I++WL
Sbjct: 568 SPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLK 627
Query: 334 HSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARV 393
HSP ++E YIRPGC+VL++YL + W+EL +L + L++GSD FWR G R
Sbjct: 628 HSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFLVRT 687
Query: 394 QHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLC 453
+ +G L ++ + ++ + PIAV + ++KG NL+ T++ C
Sbjct: 688 DAQLVSYKDGATRLSKS--WRTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQIHC 745
Query: 454 AIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPF 513
G Y+ +E G T+ ++ ++ P + GR FIEVE+ +SF P
Sbjct: 746 TSTGKYISKEVLCSAYPG--TIYDDSGVETFDLPGEPHLILGRYFIEVENRFRGNSF-PV 802
Query: 514 IVAEQEVCSEICMLESAIEAAEI----SDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHL 569
I+A VC E+ LE+ +E ++ SDD A + + K++ L FL+E+GWL ++
Sbjct: 803 IIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLNELGWLFQKAAA 862
Query: 570 KFRVGHLHP---NFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSEL 626
+ +F RF++LL FS E DWC++ K LL IL ++ + + + L
Sbjct: 863 STSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETL 922
Query: 627 AIL-EMGLLHKAVRRNCRPMVELLLNYA---PDNVLDKPGSRQKQLVDRAGSGFIFKPNV 682
+L E+ LL++AV+R M LL+ + PD+ + F PNV
Sbjct: 923 EMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDD----------------SKLYPFLPNV 966
Query: 683 IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742
GP GLTPLH+AA +DA +++DALTDDP +G+ W SA D G +P YA LR +++Y
Sbjct: 967 AGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAY 1026
Query: 743 IHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQ 802
LV +K+ + ++ +V + + + D + NKS+ + +LQ Q
Sbjct: 1027 NELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSCN------Q 1077
Query: 803 CRLCEQKVAYRNMRS-SLVYRPVMLSMVAIAAVCVCVALLFKSSPEVLYIF---RPFRWE 858
C + + + R M S L+ RP + SM+AIAAVCVCV + ++ L F R F+WE
Sbjct: 1078 CAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRA----LLRFNSGRSFKWE 1133
Query: 859 LLKYGS 864
L +G+
Sbjct: 1134 RLDFGT 1139
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|A2YX04|SPL15_ORYSI Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 319/606 (52%), Gaps = 53/606 (8%)
Query: 278 SPP----QASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLS 333
SPP Q+ S S S S S+S+ + Q RT RI+FKLFGK+P+ P LR +I++WL
Sbjct: 568 SPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLK 627
Query: 334 HSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARV 393
HSP ++E YIRPGC+VL++YL + W+EL +L + L++GSD FWR G R
Sbjct: 628 HSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFLVRT 687
Query: 394 QHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLC 453
+ +G L ++ + ++ + PIAV + ++KG NL+ T++ C
Sbjct: 688 DAQLVSYKDGATRLSKS--WRTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQIHC 745
Query: 454 AIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPF 513
G Y+ +E G T+ ++ ++ P + GR FIEVE+ +SF P
Sbjct: 746 TSTGKYISKEVLCSAYPG--TIYDDSGVETFDLPGEPHLILGRYFIEVENRFRGNSF-PV 802
Query: 514 IVAEQEVCSEICMLESAIEAAEI----SDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHL 569
I+A VC E+ LE+ +E ++ SDD A + + K++ L FL+E+GWL ++
Sbjct: 803 IIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLNELGWLFQKAAA 862
Query: 570 KFRVGHLHP---NFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSEL 626
+ +F RF++LL FS E DWC++ K LL IL ++ + + + L
Sbjct: 863 STSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETL 922
Query: 627 AIL-EMGLLHKAVRRNCRPMVELLLNYA---PDNVLDKPGSRQKQLVDRAGSGFIFKPNV 682
+L E+ LL++AV+R M LL+ + PD+ + F PNV
Sbjct: 923 EMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDD----------------SKLYPFLPNV 966
Query: 683 IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742
GP GLTPLH+AA +DA +++DALTDDP +G+ W SA D G +P YA LR +++Y
Sbjct: 967 AGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAY 1026
Query: 743 IHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQ 802
LV +K+ + ++ +V + + + D + NKS+ + +LQ Q
Sbjct: 1027 NELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSCN------Q 1077
Query: 803 CRLCEQKVAYRNMRS-SLVYRPVMLSMVAIAAVCVCVALLFKSSPEVLYIF---RPFRWE 858
C + + + R M S L+ RP + SM+AIAAVCVCV + ++ L F R F+WE
Sbjct: 1078 CAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRA----LLRFNSGRSFKWE 1133
Query: 859 LLKYGS 864
L +G+
Sbjct: 1134 RLDFGT 1139
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. indica (taxid: 39946) |
| >sp|Q700C2|SPL16_ARATH Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 311/621 (50%), Gaps = 80/621 (12%)
Query: 267 PLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG----------EAQSRTDRIVFKLFGKD 316
PL L SN+ + A+ N + QS +SSG AQ RT +I FKLF KD
Sbjct: 424 PLELFGASNRGA--TANPNYNVLRHQSGYASSGSDYSPPSLNSNAQERTGKISFKLFEKD 481
Query: 317 PNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLL 376
P+ P LR +I WLS P+D+ES+IRPGC++L++Y+ + WE+L +L +R L+
Sbjct: 482 PSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQLEENLLQRVRSLV 541
Query: 377 EGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRIS---SIKPIAVPVSE 433
+ S+ FW +A +G++ L KS ++ + ++ P+AV E
Sbjct: 542 QDSE--FWSNSRFLVNAGRQLASHKHGRIRLS-----KSWRTLNLPELITVSPLAVVAGE 594
Query: 434 RVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPC-SIPN 492
+V+G NL+ RL CA G+Y E + G + + DEL SF S +
Sbjct: 595 ETALIVRGRNLTNDGMRLRCAHMGNYASME----VTGREHRLTKVDELNVSSFQVQSASS 650
Query: 493 V-FGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDFQKIAEKTEVKN 551
V GR FIE+E+ GL P I+A +C E+ LE ++ ++ + ++ +
Sbjct: 651 VSLGRCFIELEN-GLRGDNFPLIIANATICKELNRLEEEFHPKDVIEEQIQNLDRPRSRE 709
Query: 552 QALDFLHEMGWLLHRSHLKFRVG-HLHPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGI 610
+ L FL+E+GWL R K+ H P+ F RFK+LL S+E D+C++++ +L +
Sbjct: 710 EVLCFLNELGWLFQR---KWTSDIHGEPD---FSLPRFKFLLVCSVERDYCSLIRTVLDM 763
Query: 611 LFDGTVDTGDHTSSE-LAIL-EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668
+ + + + E L +L ++ LL++A++R M E L++Y+
Sbjct: 764 MVERNLGKDGLLNKESLDMLADIQLLNRAIKRRNTKMAETLIHYS--------------- 808
Query: 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL 728
V+ + FIF P++ GP +TPLH+AA +++++DALT+DP +G+ W + D+TG
Sbjct: 809 VNPSTRNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQ 868
Query: 729 TPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLS 788
TP YA++R +HSY LV RK+ K +G++ L+I I
Sbjct: 869 TPFSYAAMRDNHSYNTLVARKLADK--RNGQISLNIENGIDQ------------------ 908
Query: 789 LQTEKITTKVMQQQCRLCEQKVAYRNMRS-----SLVYRPVMLSMVAIAAVCVCVALLFK 843
+ K + +++ C C VA + R L P++ SM+A+A VCVCV +
Sbjct: 909 IGLSKRLSSELKRSCNTC-ASVALKYQRKVSGSRRLFPTPIIHSMLAVATVCVCVCVFMH 967
Query: 844 SSPEVLYIFRPFRWELLKYGS 864
+ P V F W L YGS
Sbjct: 968 AFPMVRQGSH-FSWGGLDYGS 987
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6I576|SPL9_ORYSJ Squamosa promoter-binding-like protein 9 OS=Oryza sativa subsp. japonica GN=SPL9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 196/408 (48%), Gaps = 44/408 (10%)
Query: 287 DSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPG 346
D+ S+ S S +G R+ FKL+ +P +FP LR QI +WLS P ++E YIRPG
Sbjct: 351 DTKSTYSSSCPTG-------RVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPG 403
Query: 347 CIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSV-AFIYNGQV 405
C +LT+++ + + W++L D G+ ++ L+ + L G + V + + + +G
Sbjct: 404 CTILTVFVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGAT 463
Query: 406 VLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYL----- 460
+ T L ++S RI + P + + ++ G +L + R L + +G YL
Sbjct: 464 LTSTRLEVQSP---RIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCR 520
Query: 461 --VQETCYDLMG-GADTVNENDELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAE 517
+ +D +G G ++ E+ ++ S + G F+EVE+ S+FVP +V
Sbjct: 521 RILSHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGS 580
Query: 518 QEVCSEICMLESAI-EAAEISDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHL 576
+ +CSE+ + A+ +++IS D ++ + + L FL ++GWL+ K +
Sbjct: 581 KHLCSELEQIHDALCGSSDISSDPCEL--RGLRQTAMLGFLIDIGWLIR----KPSIDEF 634
Query: 577 HPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHK 636
+R+ +++F +++D+ V++ ++ L D + S L+ LE G L
Sbjct: 635 QNLLSLANIQRWICMMKFLIQNDFINVLEIIVNSL-DNII-----GSELLSNLEKGRLEN 688
Query: 637 AVRRNCRPMVELLLNYAPD--NVLD-KPGSRQKQLVDRAGSGFIFKPN 681
V L Y + N++D +P +++ VD +G + PN
Sbjct: 689 HVTE--------FLGYVSEARNIVDNRPKYDKQRQVDTRWAG-DYAPN 727
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q8S9G8|SPL7_ARATH Squamosa promoter-binding-like protein 7 OS=Arabidopsis thaliana GN=SPL7 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 273 GSNKSSPPQASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWL 332
G N + ++ +N D+ S+ S +G RI FKL+ +P +FP LR QI WL
Sbjct: 295 GMNDTKFERSPSNGDNKSAYSTVCPTG-------RISFKLYDWNPAEFPRRLRHQIFQWL 347
Query: 333 SHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYAR 392
++ P ++E YIRPGC +LT+++ + + W +L D + L + + + G +
Sbjct: 348 ANMPVELEGYIRPGCTILTVFIAMPEIMWAKLSKDPVAYLDEFILKPGKMLFGRGSMTVY 407
Query: 393 VQHSV-AFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRL 451
+ + + I G + + L+S K + + P + ++ VV G NL + R
Sbjct: 408 LNNMIFRLIKGGTTLKRVDVKLESPK---LQFVYPTCFEAGKPIELVVCGQNLLQPKCRF 464
Query: 452 LCAIEGSYLVQETCYDLMGGADTVNE---NDELQCLSFPCSIPNVFGRGFIEVEDHGLSS 508
L + G YL Y ++ D + N++ ++ S P++FG F+EVE+ S
Sbjct: 465 LVSFSGKYLPHN--YSVVPAPDQDGKRSCNNKFYKINIVNSDPSLFGPAFVEVENESGLS 522
Query: 509 SFVPFIVAEQEVCSEICMLESAIEAA 534
+F+P I+ + VCSE+ ++E A
Sbjct: 523 NFIPLIIGDAAVCSEMKLIEQKFNAT 548
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 865 | ||||||
| 225432161 | 1029 | PREDICTED: squamosa promoter-binding-lik | 0.991 | 0.833 | 0.670 | 0.0 | |
| 255556564 | 1026 | Squamosa promoter-binding protein, putat | 0.984 | 0.830 | 0.691 | 0.0 | |
| 422779156 | 1029 | squamosa promoter binding protein 5 [Vit | 0.991 | 0.833 | 0.665 | 0.0 | |
| 297736802 | 980 | unnamed protein product [Vitis vinifera] | 0.959 | 0.846 | 0.662 | 0.0 | |
| 356532884 | 1032 | PREDICTED: squamosa promoter-binding-lik | 0.993 | 0.832 | 0.634 | 0.0 | |
| 356558528 | 1032 | PREDICTED: squamosa promoter-binding-lik | 0.993 | 0.832 | 0.630 | 0.0 | |
| 356519885 | 1039 | PREDICTED: squamosa promoter-binding-lik | 0.984 | 0.820 | 0.623 | 0.0 | |
| 147820979 | 967 | hypothetical protein VITISV_025316 [Viti | 0.898 | 0.803 | 0.593 | 0.0 | |
| 225437714 | 997 | PREDICTED: squamosa promoter-binding-lik | 0.946 | 0.821 | 0.624 | 0.0 | |
| 255548291 | 1012 | conserved hypothetical protein [Ricinus | 0.960 | 0.821 | 0.585 | 0.0 |
| >gi|225432161|ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1186 bits (3068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/867 (67%), Positives = 689/867 (79%), Gaps = 9/867 (1%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHN+RRRKTHPD VVNGG
Sbjct: 170 MHSKASKALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDTVVNGG 229
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
SLNDER YLL+S+LRILSNMH+N+SDQTKDQDLLSH+ +NLA GT N R++ GLLQ
Sbjct: 230 SLNDERGIRYLLMSVLRILSNMHANSSDQTKDQDLLSHILKNLASSGGTINERDIPGLLQ 289
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
GSQ LLNAG S G EKVPD+VS G P++ SA + R +G C
Sbjct: 290 GSQDLLNAGTSVGTAEKVPDMVSNGLVPNKLLGSASRMADGSDLQASSRPIGPCLMATVP 349
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
++ +K++ T+DA G +Q LS +Q FP+ A N T GR K++N DLNNVY
Sbjct: 350 EMAEKRVFTDDAQVGMLQNLSGTQPTNRFPTGDGVPAMENMQGTTHGRIKLNNFDLNNVY 409
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
+DSQ+ +E+ E S+ P NPG L L + S KSSPPQ SANSDSTS++S S+SSGE
Sbjct: 410 NDSQDCIENPERSYGPANPGTRPLDRALLVQQDSYKSSPPQTSANSDSTSARSLSTSSGE 469
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPT 360
AQSRTDRIVFKLFGKDP+DFPLV+R+Q+LDWLSH+PT+IES+IRPGCI+LTIYLRLGK T
Sbjct: 470 AQSRTDRIVFKLFGKDPSDFPLVMRKQVLDWLSHTPTEIESFIRPGCIILTIYLRLGKST 529
Query: 361 WEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCR 420
WEELCCDLGSSL RLL+ S+D FWRTGW+Y RVQ+ +AFIY+GQVVLDTPL KSH +CR
Sbjct: 530 WEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSGQVVLDTPLPFKSH-NCR 588
Query: 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDE 480
ISSIKPIAVPVSE+ +FVVKGFNL+ S TRLLCA+EG YLVQETCY+L G DT E+D+
Sbjct: 589 ISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALEGRYLVQETCYELTEGTDTFIEHDD 648
Query: 481 LQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDF 540
LQCLSFPCS+PN+ GRGFIEVEDHGL+SSF PFIVAEQ+VCSEICMLE I+ E ++D
Sbjct: 649 LQCLSFPCSVPNISGRGFIEVEDHGLNSSFFPFIVAEQDVCSEICMLEGVIDMVETAEDI 708
Query: 541 QKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDW 600
+ K + K QALDF+HEMGWLLHR++LKFR+G + PN FPFKRFK L+EFS++HDW
Sbjct: 709 LRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDMDPNLDLFPFKRFKCLMEFSVDHDW 768
Query: 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK 660
CAVVKKLLGI+F GTV+ G+H S E+A+L+M LLH AVRRNCRPMVELLL + PD +LDK
Sbjct: 769 CAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHSAVRRNCRPMVELLLRFIPDKILDK 828
Query: 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 720
GS K+ + +GS ++FKP+ +GPAGLTPLH+AA D +ENVLDALTDDP VGIEAWK
Sbjct: 829 SGSNDKRWPN-SGSNYLFKPDFVGPAGLTPLHIAASMDGSENVLDALTDDPELVGIEAWK 887
Query: 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 780
SA+D G TPNDYA LR H+SYI LVQ+KIN K + RV+LDIP + +D ++K KP G
Sbjct: 888 SARDKVGSTPNDYACLRGHNSYIQLVQKKINNKLNR--RVVLDIPDAPLDCNTKPKPSDG 945
Query: 781 NKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRN--MRSSLVYRPVMLSMVAIAAVCVCV 838
KS RV SLQ EK + +Q C+LCEQK+AY + MR+SL YRP MLSMVAIAAVCVCV
Sbjct: 946 LKSVRVPSLQIEK---QAARQHCKLCEQKLAYGDTRMRTSLAYRPAMLSMVAIAAVCVCV 1002
Query: 839 ALLFKSSPEVLYIFRPFRWELLKYGSS 865
ALLFKSSPEVLY+FRPFRWELLKYGSS
Sbjct: 1003 ALLFKSSPEVLYVFRPFRWELLKYGSS 1029
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255556564|ref|XP_002519316.1| Squamosa promoter-binding protein, putative [Ricinus communis] gi|223541631|gb|EEF43180.1| Squamosa promoter-binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/865 (69%), Positives = 693/865 (80%), Gaps = 13/865 (1%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHN+RRRKTHP+NVVNG
Sbjct: 175 MHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPENVVNGA 234
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
SLNDE+ SSYLLISLLRILSN+HSN+SDQ K+QDLLSHL RNLA + G ++ ++S +LQ
Sbjct: 235 SLNDEKGSSYLLISLLRILSNLHSNSSDQEKNQDLLSHLLRNLASLAGATSEGSISKVLQ 294
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
SQ L NAG + G + K D ++TG E + PST AC + I +R +GQ G VP S
Sbjct: 295 ESQALENAGKTAGTLGKGSDKITTGFESAGPSTMACKSSEDI-----VRPLGQGGAVPVS 349
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
DL QK + G Q + +S S + FPSR F AK EP+A GR K +NIDLNNVY
Sbjct: 350 DLAQKSV-----WDGTPQPMPSSTSTKFFPSRCDFPAKIKEPKAAVGRIKFNNIDLNNVY 404
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
D SQ+ +LELS AP+ PG S+ PLWL G +K S PQ S NSDSTSSQS SSSSGE
Sbjct: 405 DGSQDSAGNLELSPAPLIPGTGSINCPLWLQSGFHKRSLPQMSGNSDSTSSQSPSSSSGE 464
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPT 360
AQS TDRIVFKLFGKDPNDFP+ LR QILDWLSHSPTDIESYIRPGCI+LTIYLRLGKP
Sbjct: 465 AQSCTDRIVFKLFGKDPNDFPITLRTQILDWLSHSPTDIESYIRPGCIILTIYLRLGKPE 524
Query: 361 WEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCR 420
WEE+C DLG+ L +LL+GS D FWRTGW+YARVQH V+FIYNGQVVLDTPL LKSHK CR
Sbjct: 525 WEEICIDLGARLSKLLDGSTDSFWRTGWVYARVQHCVSFIYNGQVVLDTPLPLKSHKHCR 584
Query: 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDE 480
ISSIKPIAV +SER F VKGFN+ R +TRLLCA+EG YLVQET DLM GADT NE+++
Sbjct: 585 ISSIKPIAVTLSERTDFTVKGFNIFRPSTRLLCALEGKYLVQETSRDLMDGADTTNEHNK 644
Query: 481 LQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDF 540
LQCL+FPCSIPN+ GRGF+EVEDHGLSSSF PFIVAE+EVCSEIC+LE A+E E +D
Sbjct: 645 LQCLTFPCSIPNIIGRGFVEVEDHGLSSSFFPFIVAEKEVCSEICLLEEALEVPETADGM 704
Query: 541 QKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDW 600
K E+ E KNQALDF++EMGWLLHRS LKFR+G L+PN FPF+R+KWL+EFSM+HDW
Sbjct: 705 HKNTERIEAKNQALDFVNEMGWLLHRSRLKFRLGDLYPNLDLFPFRRYKWLIEFSMDHDW 764
Query: 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK 660
CAVVKKLL ILFDGTVDTG+H+S ELA+L+MGLLH+AV+RNCR MVELLL Y PD +
Sbjct: 765 CAVVKKLLAILFDGTVDTGEHSSIELALLDMGLLHRAVQRNCRSMVELLLRYVPDKEFGR 824
Query: 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 720
G Q+Q VD FIFKP+ +GP GLTPLHVAA RD +EN+LDALTDDPG VGIEAW+
Sbjct: 825 SGLEQRQEVDGGYKSFIFKPDDVGPGGLTPLHVAAIRDGSENILDALTDDPGFVGIEAWR 884
Query: 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 780
A+DSTGLTPNDYA LR H+SYIHL+QRKIN K SE+G V+LDIP ++VD ++KQK G
Sbjct: 885 RARDSTGLTPNDYACLRGHYSYIHLIQRKINTK-SENGHVVLDIPRTLVDCNTKQK--DG 941
Query: 781 NKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVCVAL 840
KSS+ LQ ++ ++ CRLCEQK+A R+SLVYRP MLSMVAIAAVCVCVAL
Sbjct: 942 LKSSKFYGLQIGRMEMNTTKRHCRLCEQKLARGQSRTSLVYRPAMLSMVAIAAVCVCVAL 1001
Query: 841 LFKSSPEVLYIFRPFRWELLKYGSS 865
LFKSSPEVLY+F+PFRWEL+KYGSS
Sbjct: 1002 LFKSSPEVLYVFQPFRWELVKYGSS 1026
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|422779156|gb|AFX82677.1| squamosa promoter binding protein 5 [Vitis pseudoreticulata] | Back alignment and taxonomy information |
|---|
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/867 (66%), Positives = 684/867 (78%), Gaps = 9/867 (1%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHN+RRRKTHPD VVNGG
Sbjct: 170 MHSKASKALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDTVVNGG 229
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
SLNDER YLL+S+LRILSNMH+N+SDQTKDQDLLSH+ +NLA GT N R++ GLLQ
Sbjct: 230 SLNDERGIRYLLMSVLRILSNMHANSSDQTKDQDLLSHILKNLASSGGTINERDIPGLLQ 289
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
GSQ LLNAG S G EKVPD+VS G P++ SA + R +G C
Sbjct: 290 GSQDLLNAGTSVGTAEKVPDMVSNGLVPNKLLGSASRMADGSDLQASSRPIGPCLMATVP 349
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
++ +K++ T+DA G + LS +Q P+ A N T GR K++N DLNNVY
Sbjct: 350 EVAEKRVFTDDAQVGMLHNLSGTQPTNRIPTGDGVPAMENMQGTTHGRIKLNNFDLNNVY 409
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
+DSQ+ +E+ E S+ P NPG L L + S KSSPPQ SANSDSTS++S S+SSGE
Sbjct: 410 NDSQDCIENPERSYGPANPGTRPLDRALLVQQVSYKSSPPQTSANSDSTSARSLSTSSGE 469
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPT 360
AQSRTDRIVFKLFGKDP+DFPLV+ +Q+LDWLSH+PT+IES+IRPGCI+LTIYLRLGK T
Sbjct: 470 AQSRTDRIVFKLFGKDPSDFPLVMGKQVLDWLSHTPTEIESFIRPGCIILTIYLRLGKST 529
Query: 361 WEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCR 420
WEELCCDLGSSL RLL+ S+D FWRTGW+Y RVQ+ +AFIY+GQVVLDTPL KSH +CR
Sbjct: 530 WEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSGQVVLDTPLPFKSH-NCR 588
Query: 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDE 480
ISSIKPIAVPVSE+ +FVVKGFNL+ S TRLLCA+EG YLVQETCY+L G DT E+D+
Sbjct: 589 ISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALEGRYLVQETCYELTEGTDTFIEHDD 648
Query: 481 LQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDF 540
LQCLSFPCS+PN+ GRGFIEVEDHGL+SSF PFIVAEQ+VCSEICMLE I+ E ++D
Sbjct: 649 LQCLSFPCSLPNISGRGFIEVEDHGLNSSFFPFIVAEQDVCSEICMLEGVIDMVETAEDI 708
Query: 541 QKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDW 600
+ K + K QALDF+HEMGWLLHR++LKFR+G + PN FPFKRFK L+EFS++HDW
Sbjct: 709 LRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDMDPNLDLFPFKRFKCLMEFSVDHDW 768
Query: 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK 660
CAVVKKLLGI+F GTV+ G+H S E+A+L+M LLH AVRRNCRPMVELLL + PD +LDK
Sbjct: 769 CAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHSAVRRNCRPMVELLLRFIPDKILDK 828
Query: 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 720
GS K+ + +GS ++FKP+ +GPAGLTPLH+AA D +ENVLDALTDDP VGIEAWK
Sbjct: 829 SGSNDKRWPN-SGSYYLFKPDFVGPAGLTPLHIAASMDGSENVLDALTDDPELVGIEAWK 887
Query: 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 780
SA+D G TPNDYA LR H+SYI LVQ+KIN K + RV+LDIP + +D ++K KP G
Sbjct: 888 SARDKVGSTPNDYACLRGHNSYIQLVQKKINNKLNR--RVVLDIPDAPLDCNTKPKPSDG 945
Query: 781 NKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRN--MRSSLVYRPVMLSMVAIAAVCVCV 838
KS RV SLQ EK + +Q C+LCEQK+AY + MR+SL YRP MLSMVAIAAVCV V
Sbjct: 946 LKSVRVPSLQIEK---QAARQHCKLCEQKLAYGDTRMRTSLAYRPAMLSMVAIAAVCVWV 1002
Query: 839 ALLFKSSPEVLYIFRPFRWELLKYGSS 865
ALLFKSSPEVLY FRPFRWELLKYGSS
Sbjct: 1003 ALLFKSSPEVLYAFRPFRWELLKYGSS 1029
|
Source: Vitis pseudoreticulata Species: Vitis pseudoreticulata Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736802|emb|CBI26003.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/867 (66%), Positives = 678/867 (78%), Gaps = 37/867 (4%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHN+RRRKTHPD VVNGG
Sbjct: 149 MHSKASKALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDTVVNGG 208
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
SLNDER YLL+S+LRILSNMH+N+SDQTKDQDLLSH+ +NLA GT N R++ GLLQ
Sbjct: 209 SLNDERGIRYLLMSVLRILSNMHANSSDQTKDQDLLSHILKNLASSGGTINERDIPGLLQ 268
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
GSQ LLNAG S G EK SRP +G C
Sbjct: 269 GSQDLLNAGTSVGTAEKAS---------SRP-------------------IGPCLMATVP 300
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVY 240
++ +K++ T+DA G +Q LS +Q FP+ A N T GR K++N DLNNVY
Sbjct: 301 EMAEKRVFTDDAQVGMLQNLSGTQPTNRFPTGDGVPAMENMQGTTHGRIKLNNFDLNNVY 360
Query: 241 DDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
+DSQ+ +E+ E S+ P NPG L L + S KSSPPQ SANSDSTS++S S+SSGE
Sbjct: 361 NDSQDCIENPERSYGPANPGTRPLDRALLVQQDSYKSSPPQTSANSDSTSARSLSTSSGE 420
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPT 360
AQSRTDRIVFKLFGKDP+DFPLV+R+Q+LDWLSH+PT+IES+IRPGCI+LTIYLRLGK T
Sbjct: 421 AQSRTDRIVFKLFGKDPSDFPLVMRKQVLDWLSHTPTEIESFIRPGCIILTIYLRLGKST 480
Query: 361 WEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCR 420
WEELCCDLGSSL RLL+ S+D FWRTGW+Y RVQ+ +AFIY+GQVVLDTPL KSH +CR
Sbjct: 481 WEELCCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSGQVVLDTPLPFKSH-NCR 539
Query: 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDE 480
ISSIKPIAVPVSE+ +FVVKGFNL+ S TRLLCA+EG YLVQETCY+L G DT E+D+
Sbjct: 540 ISSIKPIAVPVSEQAQFVVKGFNLAGSATRLLCALEGRYLVQETCYELTEGTDTFIEHDD 599
Query: 481 LQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDF 540
LQCLSFPCS+PN+ GRGFIEVEDHGL+SSF PFIVAEQ+VCSEICMLE I+ E ++D
Sbjct: 600 LQCLSFPCSVPNISGRGFIEVEDHGLNSSFFPFIVAEQDVCSEICMLEGVIDMVETAEDI 659
Query: 541 QKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDW 600
+ K + K QALDF+HEMGWLLHR++LKFR+G + PN FPFKRFK L+EFS++HDW
Sbjct: 660 LRETGKMQAKYQALDFIHEMGWLLHRNYLKFRLGDMDPNLDLFPFKRFKCLMEFSVDHDW 719
Query: 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK 660
CAVVKKLLGI+F GTV+ G+H S E+A+L+M LLH AVRRNCRPMVELLL + PD +LDK
Sbjct: 720 CAVVKKLLGIVFSGTVNAGEHPSIEIALLDMCLLHSAVRRNCRPMVELLLRFIPDKILDK 779
Query: 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWK 720
GS K+ + +GS ++FKP+ +GPAGLTPLH+AA D +ENVLDALTDDP VGIEAWK
Sbjct: 780 SGSNDKRWPN-SGSNYLFKPDFVGPAGLTPLHIAASMDGSENVLDALTDDPELVGIEAWK 838
Query: 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 780
SA+D G TPNDYA LR H+SYI LVQ+KIN K + RV+LDIP + +D ++K KP G
Sbjct: 839 SARDKVGSTPNDYACLRGHNSYIQLVQKKINNKLNR--RVVLDIPDAPLDCNTKPKPSDG 896
Query: 781 NKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRN--MRSSLVYRPVMLSMVAIAAVCVCV 838
KS RV SLQ EK + +Q C+LCEQK+AY + MR+SL YRP MLSMVAIAAVCVCV
Sbjct: 897 LKSVRVPSLQIEK---QAARQHCKLCEQKLAYGDTRMRTSLAYRPAMLSMVAIAAVCVCV 953
Query: 839 ALLFKSSPEVLYIFRPFRWELLKYGSS 865
ALLFKSSPEVLY+FRPFRWELLKYGSS
Sbjct: 954 ALLFKSSPEVLYVFRPFRWELLKYGSS 980
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532884|ref|XP_003534999.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/865 (63%), Positives = 654/865 (75%), Gaps = 6/865 (0%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD-NVVNG 59
MHSKAT+ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKT PD VVNG
Sbjct: 172 MHSKATQALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTLPDATVVNG 231
Query: 60 GSLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLL 119
GSLN+E+ SSYLL+SLLRILSNMHSN SD ++QD+LSHL RNLA + GT N RN+ LL
Sbjct: 232 GSLNEEKGSSYLLMSLLRILSNMHSNGSDNMRNQDVLSHLLRNLASLAGTINGRNIVSLL 291
Query: 120 QGSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPA 179
+GSQGL+ AG S G + VP+ S GPEPSRP S D+ + +P S+ Q T PA
Sbjct: 292 EGSQGLVKAGTS-GAAQNVPNTNSDGPEPSRPFDSFIKMDDGLIHRDPPESMVQRETTPA 350
Query: 180 SDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNV 239
+D+ +K I++ G +++ S QS + SR ++ + T GR +SNIDLNNV
Sbjct: 351 NDMAKKCIASGSDGVGSLKSPSVPQSSNVLLSRDGLPPQSVAAQTTVGRIGLSNIDLNNV 410
Query: 240 YDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG 299
YDD Q+ VE+ S P+ G SL PLW+ S KSSPPQ S NSDSTS+QS SSSSG
Sbjct: 411 YDDVQDYVENTRNSCPPLPSGNGSLDHPLWIQCDSLKSSPPQTSRNSDSTSTQSPSSSSG 470
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
EAQSRTDRIVFKLFGK PNDFP LR QIL+WLSHSPT+IESYIRPGCI+LTIYLRL
Sbjct: 471 EAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENS 530
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
WEELC +L SSLR+L +D FWRTGW+Y RVQHSVAF+YNGQVVLD PL LKS ++C
Sbjct: 531 AWEELCYNLESSLRKL-AAPNDSFWRTGWIYTRVQHSVAFLYNGQVVLDAPLRLKSPQNC 589
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
+I +KP+AV S +FVVKGFN S TRLLCA+EG YLVQ++CYDL+ AD VN +
Sbjct: 590 QILCVKPLAVSASSSAQFVVKGFNFLLSNTRLLCALEGKYLVQDSCYDLIDSADAVNGHQ 649
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDD 539
ELQ LSF C +PNV GRGFIEVED+GLSS PFIVAEQE+C EIC L++ IEAAE++DD
Sbjct: 650 ELQHLSFSCHVPNVTGRGFIEVEDNGLSSCSFPFIVAEQEICLEICTLDNVIEAAEMADD 709
Query: 540 FQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHD 599
Q E K QAL F+ EMGWLLHRS +K R+G + P F F RF WL+ FSM+HD
Sbjct: 710 NQIKTNLMEEKTQALYFIQEMGWLLHRSRVKVRLGPMAPVQDRFHFNRFIWLVGFSMDHD 769
Query: 600 WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659
WCAV+KKLL I+F+GTVDTGDH S ELA+LEMGLLHKAV+RNCRPMVE+LL + P D
Sbjct: 770 WCAVMKKLLNIIFEGTVDTGDHASVELALLEMGLLHKAVKRNCRPMVEILLKFVPVKASD 829
Query: 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719
S +KQ V+++ FIF+P+ +GP GLTPLHVAA +ENVLDALTDDPG VG EAW
Sbjct: 830 GGDSNEKQ-VNKSPDRFIFRPDTVGPVGLTPLHVAASMHGSENVLDALTDDPGMVGTEAW 888
Query: 720 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLK 779
KSAQD+TGLTP DYAS+R ++SYI LVQ K + + +LDIPG++VD ++KQK
Sbjct: 889 KSAQDATGLTPYDYASMRGYYSYIQLVQSKTSNTCKS--QHVLDIPGTLVDSNTKQKQSD 946
Query: 780 GNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVCVA 839
++SS+V SLQTEKI T M ++C LC+QK+AY MR +LVYRP MLSMVAIAAVCVCVA
Sbjct: 947 RHRSSKVSSLQTEKIETTAMPRRCGLCQQKLAYGGMRRALVYRPAMLSMVAIAAVCVCVA 1006
Query: 840 LLFKSSPEVLYIFRPFRWELLKYGS 864
LLFKSSP+V Y+F+PF WE L+YGS
Sbjct: 1007 LLFKSSPKVYYVFQPFSWESLEYGS 1031
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558528|ref|XP_003547557.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/865 (63%), Positives = 655/865 (75%), Gaps = 6/865 (0%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD-NVVNG 59
MHSKAT+ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD VVNG
Sbjct: 172 MHSKATQALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDATVVNG 231
Query: 60 GSLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLL 119
GSLN+E+ SSYLL+SLLRILSNMHSN SD ++QD+LSHL RNLA + GT N RN+ LL
Sbjct: 232 GSLNEEKGSSYLLMSLLRILSNMHSNGSDNMRNQDVLSHLLRNLASLTGTINGRNIVSLL 291
Query: 120 QGSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPA 179
+GSQ L+ AG S G + VP+ S GPEPSRP S+ D+ + +P S+ QC T PA
Sbjct: 292 EGSQDLVKAGTS-GAAQNVPNTNSNGPEPSRPLYSSIKMDDGLIHRDPPESLVQCETTPA 350
Query: 180 SDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNV 239
+D+ ++ I++ + G +++ S S + S S ++ + T GR +SNIDLNNV
Sbjct: 351 NDMAKECIASGNDEVGSLKSPSVPLSTNVLLSMDSLPPQSIAAQTTVGRIGLSNIDLNNV 410
Query: 240 YDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG 299
YDD Q+ VE+ P+ G SL PL + S KSSPPQ S NSDSTS+QS SSSSG
Sbjct: 411 YDDVQDYVENTRNCRPPLPSGNGSLDHPLLVQCDSLKSSPPQTSRNSDSTSTQSPSSSSG 470
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
EAQSRTDRIVFKLFGK PNDFP LR QIL+WLSHSPT+IESYIRPGCI+LTIYLRL
Sbjct: 471 EAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPGCIMLTIYLRLENS 530
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
WEELC +LG SLR+L S+D FWRTGW+Y RVQHSVAF+YNGQVVLD PL LKS +SC
Sbjct: 531 AWEELCYNLGPSLRKL-AASNDCFWRTGWIYTRVQHSVAFLYNGQVVLDAPLRLKSPQSC 589
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
+I +KP+AV S +FV+KGFN S +RLLCA+EG YLVQ+ CYDL+ D N +
Sbjct: 590 QILCVKPLAVSASSCAQFVLKGFNFLLSNSRLLCALEGKYLVQDNCYDLIDSVDAANGHH 649
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDD 539
ELQ L F C +PNV GRGFIEVED+GLSS PFIVAEQE+CSEIC LE+ IEAAE +DD
Sbjct: 650 ELQHLRFSCHVPNVTGRGFIEVEDNGLSSCSFPFIVAEQEICSEICKLENVIEAAETADD 709
Query: 540 FQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHD 599
Q + E K QAL F+ EMGWLLHRS +K R+G + P F F RF WL+ FSM+HD
Sbjct: 710 IQIKTKLMEEKTQALYFIQEMGWLLHRSRVKVRLGPVAPVQDNFHFNRFMWLVGFSMDHD 769
Query: 600 WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659
WCAV+KKLL I+F+GTVDTGDH S ELA+LEMGLLHKAV+RN RPMVELLL + P D
Sbjct: 770 WCAVMKKLLNIVFEGTVDTGDHASVELALLEMGLLHKAVKRNFRPMVELLLKFVPVKASD 829
Query: 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719
S +KQ ++++ F+F+P+ +GPA LTPLHVAA +ENVLDALTDDPG VG EAW
Sbjct: 830 GGDSNEKQ-INKSPDRFLFRPDTVGPARLTPLHVAASMHGSENVLDALTDDPGMVGSEAW 888
Query: 720 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLK 779
KSAQD+TGLTP DYASLR ++SYI LVQRK + + ++ + +LDIPG++VD ++KQK
Sbjct: 889 KSAQDATGLTPYDYASLRGYYSYIQLVQRKTS-NTCKNQQHVLDIPGNLVDSNTKQKQSD 947
Query: 780 GNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVCVA 839
G++SS+VLSLQTEKI T M + C LC+QK+ Y MR +LV+RP MLSMVAIAAVCVCVA
Sbjct: 948 GHRSSKVLSLQTEKIETTAM-RHCGLCQQKLVYGGMRRALVFRPAMLSMVAIAAVCVCVA 1006
Query: 840 LLFKSSPEVLYIFRPFRWELLKYGS 864
LLFKSSP+V Y+F+PF WE L+YGS
Sbjct: 1007 LLFKSSPKVYYVFQPFSWESLEYGS 1031
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356519885|ref|XP_003528599.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/865 (62%), Positives = 652/865 (75%), Gaps = 13/865 (1%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD-NVVNG 59
+HSKAT ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHN+RRRKTHPD +VVN
Sbjct: 186 VHSKATMALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDVSVVNE 245
Query: 60 GSLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLL 119
GSLND+R S+YLL+SLLRIL+N+HSN SD T++QD+LSHL +NLA + G +N L+ LL
Sbjct: 246 GSLNDQRDSNYLLMSLLRILTNLHSNGSDHTRNQDILSHLLKNLASLAGPNNGGRLAPLL 305
Query: 120 QGSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPA 179
+ S+GL+NAG + +K P+L S PE SRPS+S TDN I +P SV Q T PA
Sbjct: 306 EESKGLVNAGTHGADHDK-PNLNSNAPEASRPSSSI-KTDNGIIAQDPPMSVVQYET-PA 362
Query: 180 SDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNV 239
+ + QK I++ D G ++ S + R S ++ E GR ++NIDLNNV
Sbjct: 363 NGMTQKCIASGDG-VGNLKPPSGPLLSNVCEPRDSVPSQLTTAETKVGRGNLNNIDLNNV 421
Query: 240 YDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG 299
Y+D Q VE+ + + PV G + WL S KSSPPQ S NSDSTS+QS SSSSG
Sbjct: 422 YNDIQNTVENHKKPYPPVASGMGFIDHASWLQCDSLKSSPPQTSRNSDSTSTQSPSSSSG 481
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
EAQSRTDRIVFKLFGKDP+DFPL+LR QIL+WLS SPT+IESYIRPGCI+LTIYLRL K
Sbjct: 482 EAQSRTDRIVFKLFGKDPSDFPLLLRSQILNWLSRSPTEIESYIRPGCIILTIYLRLEKS 541
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
WEEL C+LGSSLR+LL S+D FWRTGW+YARVQH+VAF+YNGQVVLD PL LKS + C
Sbjct: 542 AWEELYCNLGSSLRKLLAASNDSFWRTGWVYARVQHAVAFLYNGQVVLDVPLRLKSPQHC 601
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
IS I P+AVP S +F+VKGFNLS+S+TRL CA+EG YLV +C+DL+GGAD
Sbjct: 602 MISCINPLAVPASASAQFIVKGFNLSQSSTRLHCALEGKYLVHASCHDLIGGADA----- 656
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDD 539
+Q LSF C IP+V GRGFIEVEDHGLSS PFIVAEQEVCSEIC LE+ IE AE +DD
Sbjct: 657 PIQHLSFSCQIPSVTGRGFIEVEDHGLSSCSFPFIVAEQEVCSEICKLENVIEEAETTDD 716
Query: 540 FQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHD 599
Q + E K QALDFL EMGWLLHRSH+KF++G + P F F RF WL++FSM+H
Sbjct: 717 IQIKNQHMEEKTQALDFLQEMGWLLHRSHVKFKLGSMAPFHDLFQFNRFAWLVDFSMDHG 776
Query: 600 WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659
WCAV+KKLL I+F+G VD G+H S ELA+L MGLLH+AV+RNCRPMVELLL + P D
Sbjct: 777 WCAVMKKLLDIIFEGGVDAGEHASIELALLNMGLLHRAVKRNCRPMVELLLRFVPVKTSD 836
Query: 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719
S KQ+ + A F+F+P+ +GPAGLTPLHVAA +ENVLDALT+DP VGIEAW
Sbjct: 837 GADSEMKQVAE-APDRFLFRPDTVGPAGLTPLHVAASMSGSENVLDALTNDPRMVGIEAW 895
Query: 720 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLK 779
KSA+DSTGLTPND+A LR ++SYI LVQ K NKK + ++DIPG++VD ++ QK
Sbjct: 896 KSARDSTGLTPNDHACLRGYYSYIQLVQNKTNKKGER--QHLVDIPGTVVDSNTTQKQSD 953
Query: 780 GNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVCVA 839
GN++ RV SL+TEKI T M +QCR C+QKVAY M++++VYRPVMLSMV IA VCVCVA
Sbjct: 954 GNRTCRVPSLKTEKIETTAMPRQCRACQQKVAYGGMKTAMVYRPVMLSMVTIAVVCVCVA 1013
Query: 840 LLFKSSPEVLYIFRPFRWELLKYGS 864
LLFKSSP V Y+F+PF WE L+YG+
Sbjct: 1014 LLFKSSPRVYYVFQPFNWESLEYGA 1038
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147820979|emb|CAN74605.1| hypothetical protein VITISV_025316 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/895 (59%), Positives = 628/895 (70%), Gaps = 118/895 (13%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHN+RRRKTHPD VVNGG
Sbjct: 161 MHSKASKALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDTVVNGG 220
Query: 61 SLNDERSSSYLLISLLRILSNMHS----------------------------NNSDQTKD 92
SLNDER YLL+S+LRILSNMH+ N+SDQTKD
Sbjct: 221 SLNDERGIRYLLMSVLRILSNMHAQAVVFILALKKIAGEVERILIGFIDTRANSSDQTKD 280
Query: 93 QDLLSHLFRNLAGVVGTSNVRNLSGLLQGSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPS 152
QDLLSH+ +NLA GT N R++ GLLQGSQ LLNAG S G EKVPD+VS G P++
Sbjct: 281 QDLLSHILKNLASSGGTINERDIPGLLQGSQDLLNAGTSVGTAEKVPDMVSNGLVPNKLL 340
Query: 153 TSACMTDNRIGFSEPMRSVGQCGTVPASDLLQKKISTNDAHSGRVQALSASQSIEMFPSR 212
SA + R +G C ++ +K++ T
Sbjct: 341 GSASRMADGSDLQASSRPIGPCLMATVPEMAEKRVFT----------------------- 377
Query: 213 SSFSAKANEPEATFGRSKMSNIDLNNVYDDSQERVEHLELSHAPVNPGPVSLYSPLWLHP 272
DD+ + +E+ E S+ P NPG L L +
Sbjct: 378 ----------------------------DDAPDCIENPERSYGPANPGTRPLDHALLVQQ 409
Query: 273 GSNKSSPPQASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWL 332
S KSSPPQ SANSDSTS++S S+SSGEAQSRTDRIVFKLFGKDP+DFPLV+R+Q+LDWL
Sbjct: 410 DSYKSSPPQTSANSDSTSARSLSTSSGEAQSRTDRIVFKLFGKDPSDFPLVMRKQVLDWL 469
Query: 333 SHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYAR 392
SH+PT+IES+IRPGCI+LTIYLRLGK TWEE+C + S
Sbjct: 470 SHTPTEIESFIRPGCIILTIYLRLGKSTWEEVCFFISSR--------------------- 508
Query: 393 VQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLL 452
GQVVLDTPL KSH +CRISSIKPIAVPVSE+ +FVVKGFNL+ S TRLL
Sbjct: 509 ---------KGQVVLDTPLPFKSH-NCRISSIKPIAVPVSEQAQFVVKGFNLAGSATRLL 558
Query: 453 CAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVP 512
CA+EG YLVQETCY+L G DT E+D+LQCLSFPCS+PN+ GRGFIEVEDHGL+SSF P
Sbjct: 559 CALEGRYLVQETCYELTEGTDTFIEHDDLQCLSFPCSVPNISGRGFIEVEDHGLNSSFFP 618
Query: 513 FIVAEQEVCSEICMLESAIEAAEISDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFR 572
FIVAEQ+VCSEICMLE I+ E ++D + K + K QALDF+HEMGWLLHR++LKFR
Sbjct: 619 FIVAEQDVCSEICMLEGVIDMVETAEDILRETGKMQAKYQALDFIHEMGWLLHRNYLKFR 678
Query: 573 VGHLHPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMG 632
+G + PN FPFKRFK L+EFS++HDWCAVVKKLLGI+F GTV+ G+H S E+A+L+M
Sbjct: 679 LGDMDPNLDLFPFKRFKCLMEFSVDHDWCAVVKKLLGIVFSGTVNAGEHPSIEIALLDMC 738
Query: 633 LLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LLH AVRRNCRPMV LLL + PD +LDK GS K+ + +GS ++FKP+ +GPAGLTPLH
Sbjct: 739 LLHSAVRRNCRPMVXLLLRFIPDKILDKSGSNDKRWPN-SGSNYLFKPDFVGPAGLTPLH 797
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752
+AA D +ENVLDALTDDP VGIEAWKSA+D G TPNDYA LR H+SYI LVQ+KIN
Sbjct: 798 IAASMDGSENVLDALTDDPELVGIEAWKSARDKXGSTPNDYACLRGHNSYIQLVQKKINX 857
Query: 753 KSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAY 812
K RV+LDIP + +D ++K KP G KS RV SLQ EK + +Q C+LCEQK+AY
Sbjct: 858 KLBR--RVVLDIPDAPLDCNTKPKPSDGLKSVRVPSLQIEK---QAARQHCKLCEQKLAY 912
Query: 813 RN--MRSSLVYRPVMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWELLKYGSS 865
+ MR+SL YRP MLSMVAIAAVCVCVALLFKSSPEVLY+FRPFRWELLKYGSS
Sbjct: 913 GDTRMRTSLAYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLKYGSS 967
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437714|ref|XP_002273228.1| PREDICTED: squamosa promoter-binding-like protein 12-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/868 (62%), Positives = 637/868 (73%), Gaps = 49/868 (5%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA ALVGN MQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD NG
Sbjct: 176 MHSKAGCALVGNDMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDAAGNGN 235
Query: 61 SLNDERSSSYLLISLLRILSNMHSNN-SDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLL 119
SLND+++S YLLISLLRILSNMHSN+ SDQTKDQDLLSHL R+LA GT+ RN+SGLL
Sbjct: 236 SLNDDQASGYLLISLLRILSNMHSNDKSDQTKDQDLLSHLLRSLASYGGTNGSRNISGLL 295
Query: 120 QGSQGLLNAGPSNGNVEKVPDLVSTGPE-PSRPSTSACMTDNRIGFSEPMRSVGQCGTVP 178
Q SQ LLN G S GN E V L+ G + P RP VP
Sbjct: 296 QESQ-LLNDGISVGNTEVVSALLPNGSQAPPRPIKHL--------------------KVP 334
Query: 179 ASDLLQKKISTNDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNN 238
S++L K + ++A G +Q S S T G+ K++N DLN+
Sbjct: 335 ESEILPKGVHADEARVGNMQMTSLRDS-------------------TAGQIKLNNFDLND 375
Query: 239 VYDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSS 298
+Y DS + +E LE S P N G SL P W+ S++SSPPQ S NSDS S+QS SSSS
Sbjct: 376 IYIDSDDGMEDLERSPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSS 435
Query: 299 GEAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGK 358
GEAQSRTDRIVFKLFGK+PNDFPLVLR QILDWLSHSPTDIESYIRPGCIVLTIYLRL +
Sbjct: 436 GEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRLPE 495
Query: 359 PTWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKS 418
TWEELCCDLGSSL RLL+ S+D FWRTGW+Y RVQH +AFIYNGQVV+D L LK++
Sbjct: 496 STWEELCCDLGSSLSRLLDVSNDTFWRTGWVYIRVQHQIAFIYNGQVVVDMSLPLKTNNY 555
Query: 419 CRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEN 478
+I SIKPIA+ +SE +F+VKGFNLSR TRLLCA+EG YLV+E ++LM D+V E+
Sbjct: 556 SKILSIKPIAISMSEEAQFLVKGFNLSRPATRLLCALEGKYLVKEATHELMDDIDSVKEH 615
Query: 479 DELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISD 538
DELQ L+F CSIP + GRGFIEVEDHGLSSSF P IVAE++VCSEICMLES IE +I +
Sbjct: 616 DELQYLNFSCSIPKMTGRGFIEVEDHGLSSSFFPIIVAEKDVCSEICMLESTIEMTDIDE 675
Query: 539 DFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEH 598
D K E KNQA+DF+HE+GWLLHRS LK R+GHL PN F FKRFKWL+EFSM+
Sbjct: 676 DGCGTG-KLETKNQAMDFIHEIGWLLHRSQLKSRLGHLDPNADLFSFKRFKWLMEFSMDR 734
Query: 599 DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL 658
DWCAVVKKLL I+ DGTV G++ S +LA +EMGLLH+AVRRN RP+VELLL Y P+ V
Sbjct: 735 DWCAVVKKLLDIMLDGTVGAGEYPSLKLAFMEMGLLHRAVRRNSRPLVELLLRYVPERVS 794
Query: 659 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEA 718
D S K +V+ + F+ +P+V+GPAGLTPLH+AA RD +E+VLDALTDDPG VG+EA
Sbjct: 795 DVLASDDKSMVEGGRASFLLRPDVVGPAGLTPLHIAAGRDGSEDVLDALTDDPGMVGVEA 854
Query: 719 WKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPL 778
WKSA+DSTG TP DYA LR H+SYIHLVQ+KIN++ +G V++D+P + D+ QK
Sbjct: 855 WKSARDSTGFTPEDYARLRGHYSYIHLVQKKINRRLG-NGHVVVDVPSHLSDYSVNQK-- 911
Query: 779 KGNKSSRVLSLQTEKITTK-VMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVC 837
Q E+ T + + QQQC+ C KVAY N SL+YRP MLSMVAIAAVCVC
Sbjct: 912 --QNDEATTGFQIERTTLRPIQQQQCKRCNHKVAYGNASRSLLYRPAMLSMVAIAAVCVC 969
Query: 838 VALLFKSSPEVLYIFRPFRWELLKYGSS 865
VALLFKSSPEVLY+F PFRWELL YG+S
Sbjct: 970 VALLFKSSPEVLYVFTPFRWELLDYGTS 997
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548291|ref|XP_002515202.1| conserved hypothetical protein [Ricinus communis] gi|223545682|gb|EEF47186.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/866 (58%), Positives = 626/866 (72%), Gaps = 35/866 (4%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
MHSKA+KALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKT+PD V N
Sbjct: 181 MHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDTVGNAS 240
Query: 61 SLNDERSSSYLLISLLRILSNMHSNNSDQTKDQDLLSHLFRNLAGVVGTSNVRNLSGLLQ 120
+LNDE++SSYLLISLL+ILSNMHSN SDQ DQDLLSHL R+LA + LSGLLQ
Sbjct: 241 TLNDEQTSSYLLISLLKILSNMHSNRSDQVTDQDLLSHLLRSLASQSMEHGGKKLSGLLQ 300
Query: 121 GSQGLLNAGPSNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPAS 180
+ LLN G S N E + N +G +RS+ VP S
Sbjct: 301 EPRALLNGGTSFRNSEVFLTFIL----------------NALGL---LRSLKLHLIVPFS 341
Query: 181 DLLQKKISTNDAHSGRVQALSASQSIEMFPS-RSSFSAKANEPEATFGRSKMSNIDLNNV 239
+ Q+ + ++ A+ VQ S+ M PS +++ A + ++T + KM+N DLN++
Sbjct: 342 GMSQRVLCSHGANGPNVQTSSS-----MKPSIPNNYPAYSEVRDSTAVQVKMNNFDLNDI 396
Query: 240 YDDSQERVEHLELSHAPVNPGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSG 299
Y DS + E +E S P N G SL P W+ S++SSPPQ S NSDS S+QS SSSSG
Sbjct: 397 YIDSDDGAEDIERSPVPTNMGTSSLDCPSWIQQDSHQSSPPQTSGNSDSASAQSPSSSSG 456
Query: 300 EAQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKP 359
+AQSRTDRI+FKLFGK+PNDFPLVLR QILDWLSHSPTDIESYIRPGC++LTIYLR +
Sbjct: 457 DAQSRTDRIIFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCVILTIYLRQAEA 516
Query: 360 TWEELCCDLGSSLRRLLEGSDDLFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSC 419
WEELCC+L SSL RLL+ SD+ FWRTGW Y RVQH +AFIYNGQVV+DT L L+S+
Sbjct: 517 AWEELCCNLSSSLSRLLDVSDNAFWRTGWAYIRVQHQIAFIYNGQVVVDTSLPLRSNNHS 576
Query: 420 RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNEND 479
+I+S+KPIA+P +ER +FV+KG NLSR TRLLCA+EG Y++QE ++M D +N +D
Sbjct: 577 KIASVKPIAIPAAERAQFVIKGINLSRPATRLLCAVEGKYMLQENTEEMMDDIDNINAHD 636
Query: 480 ELQCLSFPCSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDD 539
ELQC+ F CSIP V GRGFIE+EDHG SSSF PFIVAE++VC EI MLE +E D
Sbjct: 637 ELQCIKFCCSIPMVSGRGFIEIEDHGFSSSFFPFIVAEEDVCLEIRMLEGTLEFVGTDAD 696
Query: 540 FQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHD 599
+ K E KNQA+DF++E+GWLLHRS L R+GHL+P FP RFKWL+EFSM+H+
Sbjct: 697 LGG-SGKIEAKNQAMDFINEIGWLLHRSQLHSRLGHLNPCTDLFPLSRFKWLMEFSMDHE 755
Query: 600 WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659
WCAVV KLL IL +G V TG+H+S LA+ EMGLLH+AVR+N R +VELLL Y P +
Sbjct: 756 WCAVVTKLLNILHNGIVGTGEHSSLNLALSEMGLLHRAVRKNSRSLVELLLRYVP----E 811
Query: 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719
K G K VD + F+F+P+V GPAGLTPLH+AA +D +E+VLDALTDDPG VG+EAW
Sbjct: 812 KSGPGNKLPVDGSHVNFLFRPDVTGPAGLTPLHIAAGKDGSEDVLDALTDDPGMVGVEAW 871
Query: 720 KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLK 779
K A DSTG TP YA LR H+SYIHLVQ+KINK+ + +G V+LDIPG++ + + QK +
Sbjct: 872 KKAHDSTGFTPEGYARLRGHYSYIHLVQKKINKRPA-AGHVVLDIPGTLSECNVNQKQNE 930
Query: 780 GNKSSRVLSLQTEKITTKVMQQQCRLCEQKVAYRNMRSSLVYRPVMLSMVAIAAVCVCVA 839
G + S + + + +Q+ C+LC QK+ Y SL+YRP MLSMVAIAAVCVCVA
Sbjct: 931 GVTA----SFEVGQPAVRSIQRSCKLCHQKLDYGTAGRSLLYRPAMLSMVAIAAVCVCVA 986
Query: 840 LLFKSSPEVLYIFRPFRWELLKYGSS 865
LLFKS PEV+Y+FRPFRWELL +G+S
Sbjct: 987 LLFKSCPEVVYVFRPFRWELLDFGTS 1012
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 865 | ||||||
| TAIR|locus:2041329 | 881 | SPL1 "squamosa promoter bindin | 0.505 | 0.496 | 0.471 | 3.2e-194 | |
| TAIR|locus:2101402 | 927 | SPL12 "squamosa promoter-bindi | 0.495 | 0.462 | 0.460 | 1.4e-135 | |
| TAIR|locus:2037355 | 1035 | SPL14 "squamosa promoter bindi | 0.402 | 0.336 | 0.332 | 4.7e-64 | |
| TAIR|locus:2011706 | 988 | AT1G76580 [Arabidopsis thalian | 0.388 | 0.340 | 0.302 | 5.8e-57 | |
| TAIR|locus:2087105 | 181 | SPL5 "squamosa promoter bindin | 0.068 | 0.325 | 0.677 | 4.8e-16 | |
| TAIR|locus:2009675 | 174 | SPL4 "squamosa promoter bindin | 0.070 | 0.350 | 0.622 | 6.2e-16 | |
| TAIR|locus:2057656 | 131 | SPL3 "squamosa promoter bindin | 0.061 | 0.404 | 0.679 | 7.3e-15 | |
| TAIR|locus:2026428 | 405 | AT1G69170 [Arabidopsis thalian | 0.056 | 0.120 | 0.734 | 1.8e-14 | |
| TAIR|locus:2159717 | 359 | SPL13A "SQUAMOSA PROMOTER-BIND | 0.064 | 0.155 | 0.625 | 1.7e-13 | |
| TAIR|locus:2832472 | 359 | SPL13B "SQUAMOSA PROMOTER-BIND | 0.064 | 0.155 | 0.625 | 1.7e-13 |
| TAIR|locus:2041329 SPL1 "squamosa promoter binding protein-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 221/469 (47%), Positives = 288/469 (61%)
Query: 190 NDAHSGRVQALSASQSIEMFPSRSSFSAKANEPEATFGRSKMSNIDLNNVYDDSQERVEH 249
N A G QA + ++ F +R +A N E + KM++ DLN++Y DS +
Sbjct: 257 NSALLGIEQA--PQEELKQFSARQDGTATENRSEK---QVKMNDFDLNDIYIDSDDT--D 309
Query: 250 LELSHAPVNPGPVSLYSPLWLHPGSNKSSPPXXXXXXXXXXXXXXXXXXXXXXXRTDRIV 309
+E S P NP SL P W+H +SSPP RT RIV
Sbjct: 310 VERSPPPTNPATSSLDYPSWIH----QSSPPQTSRNSDSASDQSPSSSSEDAQMRTGRIV 365
Query: 310 FKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCXXX 369
FKLFGK+PN+FP+VLR QILDWLSHSPTD+ESYIRPGCIVLTIYLR + WEEL
Sbjct: 366 FKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGCIVLTIYLRQAETAWEELSDDLG 425
Query: 370 XXXXXXXXXXXXXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAV 429
W TGW+Y RVQ+ +AF+YNGQVV+DT L LKS I S+KP+A+
Sbjct: 426 FSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNGQVVVDTSLSLKSRDYSHIISVKPLAI 485
Query: 430 PVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADT-VNENDEL-QCLSFP 487
+E+ +F VKG NL + TRLLC++EG YL+QET +D D +N E+ +C++F
Sbjct: 486 AATEKAQFTVKGMNLRQRGTRLLCSVEGKYLIQETTHDSTTREDDDFKDNSEIVECVNFS 545
Query: 488 CSIPNVFGRGFIEVEDHGLSSSFVPFIVAEQE-VCSEICMLESAIEAAEISDDFQKIAEK 546
C +P + GRGF+E+ED GLSSSF PF+V E + VCSEI +LE+ +E
Sbjct: 546 CDMPILSGRGFMEIEDQGLSSSFFPFLVVEDDDVCSEIRILETTLEFTG----------- 594
Query: 547 TEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWCAVVKK 606
T+ QA+DF+HE+GWLLHRS L G PN FP RF+WL+EFSM+ +WCAV++K
Sbjct: 595 TDSAKQAMDFIHEIGWLLHRSKL----GESDPNPGVFPLIRFQWLIEFSMDREWCAVIRK 650
Query: 607 LLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVELLLNYAP 654
LL + FDG V G+ +SS A L E+ LLH+AVR+N +PMVE+LL Y P
Sbjct: 651 LLNMFFDGAV--GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIP 697
|
|
| TAIR|locus:2101402 SPL12 "squamosa promoter-binding protein-like 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 975 (348.3 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 211/458 (46%), Positives = 281/458 (61%)
Query: 205 SIEMFPSRSSFSAKANE---PEATFGRSKMSNIDLNNVYDDSQERVEHLELSHAPVNPGP 261
S+ P + ++ A E P+ + + K+++ DLN++Y DS + + S P NP
Sbjct: 302 SVSETPWQEVYANSAQERVAPDRSEKQVKVNDFDLNDIYIDSDDTTDIERSSPPPTNPAT 361
Query: 262 VSLYSPLWLHPGSNKSSPPXXXXXXXXXXXXXX-XXXXXXXXXRTDRIVFKLFGKDPNDF 320
SL H S +SSPP RTDRIVFKLFGK+PNDF
Sbjct: 362 SSLD----YHQDSRQSSPPQTSRRNSDSASDQSPSSSSGDAQSRTDRIVFKLFGKEPNDF 417
Query: 321 PLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCXXXXXXXXXXXXXX 380
P+ LR QIL+WL+H+PTD+ESYIRPGCIVLTIYLR + +WEELCC
Sbjct: 418 PVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEASWEELCCDLSFSLRRLLDLSD 477
Query: 381 XXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERVKFVVK 440
W GWLY RVQ+ +AF +NGQVVLDT L L+SH +I +++P+AV +++ +F VK
Sbjct: 478 DPLWTDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYSQIITVRPLAV--TKKAQFTVK 535
Query: 441 GFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIE 500
G NL R TRLLC +EG++LVQE M D + EN+E+ ++F C +P GRGF+E
Sbjct: 536 GINLRRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENNEIDFVNFSCEMPIASGRGFME 595
Query: 501 VEDHG-LSSSFVPFIVAEQE-VCSEICMLESAIEAAEISDDFQKIAEKTEVKNQALDFLH 558
+ED G LSSSF PFIV+E E +CSEI LES +E T+ QA+DF+H
Sbjct: 596 IEDQGGLSSSFFPFIVSEDEDICSEIRRLESTLEFTG-----------TDSAMQAMDFIH 644
Query: 559 EMGWLLHRSHLKFRVGHL-HPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFD-GTV 616
E+GWLLHRS LK R+ H F RFK+L+EFSM+ +WC V+KKLL ILF+ GTV
Sbjct: 645 EIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSMDREWCCVMKKLLNILFEEGTV 704
Query: 617 DTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP 654
D S + A+ E+ LLH+AVR+N +PMVE+LL ++P
Sbjct: 705 DP----SPDAALSELCLLHRAVRKNSKPMVEMLLRFSP 738
|
|
| TAIR|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 475 (172.3 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 126/379 (33%), Positives = 205/379 (54%)
Query: 414 KSHKSCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGAD 473
++ S + S+ P+AV E VV+G +L+ + C GSY+ E +
Sbjct: 612 RTWNSPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVC--RQ 669
Query: 474 TVNENDELQCLSFPCSI--PNVFGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICML--ES 529
T+ DEL SF P GR FIEVE+ SF P I+A +C E+ L E
Sbjct: 670 TIF--DELNVNSFKVQNVHPGFLGRCFIEVENGFRGDSF-PLIIANASICKELNRLGEEF 726
Query: 530 AIEAAEISDDFQKIAEKTEV-KNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRF 588
++ +++++ + + + + + L FL+E+GWL ++ + L F RF
Sbjct: 727 HPKSQDMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKN----QTSELREQSDF-SLARF 781
Query: 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAIL-EMGLLHKAVRRNCRPMVE 647
K+LL S+E D+CA+++ LL +L + + + L +L E+ LL++AV+R MVE
Sbjct: 782 KFLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVE 841
Query: 648 LLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707
LL++Y N L SR+ F+F PN+ GP G+TPLH+AAC +++++D L
Sbjct: 842 LLIHYLV-NPLTLSSSRK----------FVFLPNITGPGGITPLHLAACTSGSDDMIDLL 890
Query: 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGS 767
T+DP +G+ +W + +D+TG TP YA++R +H+Y LV RK+ K ++ +V L+I
Sbjct: 891 TNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNK--QVSLNIEHE 948
Query: 768 IVDWD--SKQKPLKGNKSS 784
+VD SK+ L+ NKSS
Sbjct: 949 VVDQTGLSKRLSLEMNKSS 967
|
|
| TAIR|locus:2011706 AT1G76580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 414 (150.8 bits), Expect = 5.8e-57, Sum P(2) = 5.8e-57
Identities = 107/354 (30%), Positives = 178/354 (50%)
Query: 304 RTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEE 363
RT +I FKLF KDP+ P LR +I WLS P+D+ES+IRPGC++L++Y+ + WE+
Sbjct: 469 RTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQ 528
Query: 364 LCCXXXXXXXXXXXXXXXXFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISS 423
L FW +A +G++ L ++ + +
Sbjct: 529 L--EENLLQRVRSLVQDSEFWSNSRFLVNAGRQLASHKHGRIRLSKSW--RTLNLPELIT 584
Query: 424 IKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQC 483
+ P+AV E +V+G NL+ RL CA G+Y E + G + + DEL
Sbjct: 585 VSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYASME----VTGREHRLTKVDELNV 640
Query: 484 LSFPC-SIPNV-FGRGFIEVEDHGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDFQ 541
SF S +V GR FIE+E+ GL P I+A +C E+ LE ++ ++
Sbjct: 641 SSFQVQSASSVSLGRCFIELEN-GLRGDNFPLIIANATICKELNRLEEEFHPKDVIEEQI 699
Query: 542 KIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWC 601
+ ++ + + L FL+E+GWL R H P+F P RFK+LL S+E D+C
Sbjct: 700 QNLDRPRSREEVLCFLNELGWLFQRKWTSDI--HGEPDFSL-P--RFKFLLVCSVERDYC 754
Query: 602 AVVKKLLGILFDGTVDTGDHTSSE-LAIL-EMGLLHKAVRRNCRPMVELLLNYA 653
++++ +L ++ + + + E L +L ++ LL++A++R M E L++Y+
Sbjct: 755 SLIRTVLDMMVERNLGKDGLLNKESLDMLADIQLLNRAIKRRNTKMAETLIHYS 808
|
|
| TAIR|locus:2087105 SPL5 "squamosa promoter binding protein-like 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 211 (79.3 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 40/59 (67%), Positives = 45/59 (76%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNG 59
+H+KA+ A V V QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK D+ G
Sbjct: 87 VHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEG 145
|
|
| TAIR|locus:2009675 SPL4 "squamosa promoter binding protein-like 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
+H+KA+ + + QRFCQQCSRFH LQEFDE KRSCRRRLAGHN+RRRK+ ++ G
Sbjct: 78 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEG 137
Query: 61 S 61
S
Sbjct: 138 S 138
|
|
| TAIR|locus:2057656 SPL3 "squamosa promoter binding protein-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 200 (75.5 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 2 HSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54
H+KA + + QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK+ D
Sbjct: 79 HAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131
|
|
| TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 203 (76.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 2 HSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRK 50
HSK + +V + QRFCQQCSRFH L EFD+GKRSCRRRLAGHN+RRRK
Sbjct: 149 HSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRK 197
|
|
| TAIR|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 205 (77.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNV 56
+HSK + QRFCQQCSRFH L+EFDEGKRSCR+RL GHN+RRRK P+++
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180
|
|
| TAIR|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 205 (77.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNV 56
+HSK + QRFCQQCSRFH L+EFDEGKRSCR+RL GHN+RRRK P+++
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q75LH6 | SPL6_ORYSJ | No assigned EC number | 0.4308 | 0.9098 | 0.8121 | yes | no |
| Q9SMX9 | SPL1_ARATH | No assigned EC number | 0.5063 | 0.8647 | 0.8490 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 865 | |||
| pfam03110 | 79 | pfam03110, SBP, SBP domain | 5e-32 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 3e-07 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 8e-05 |
| >gnl|CDD|190527 pfam03110, SBP, SBP domain | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 5e-32
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54
+HSKA LV + QRFCQQCSRFH+L EFDEGKRSCRRRLAGHN+RRRK PD
Sbjct: 26 VHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNERRRKPQPD 79
|
SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 3e-07
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 31/112 (27%)
Query: 634 LHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHV 693
LH A + +V+LLL D N G TPLH+
Sbjct: 44 LHLAAKNGHLEIVKLLLEKGAD------------------------VNARDKDGNTPLHL 79
Query: 694 AACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745
AA + + V+ L A +A+D G TP A+ H + L
Sbjct: 80 AARNGNLD-VVKLLLKHG------ADVNARDKDGRTPLHLAAKNGHLEVVKL 124
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 32/120 (26%)
Query: 633 LLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH A +V+LLL D N G TPLH
Sbjct: 10 PLHLAASNGHLEVVKLLLENGAD------------------------VNAKDNDGRTPLH 45
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH-LVQRKIN 751
+AA E ++ L + V +A+D G TP A+ + + L++ +
Sbjct: 46 LAAKNGHLE-IVKLLLEKGADV------NARDKDGNTPLHLAARNGNLDVVKLLLKHGAD 98
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 865 | |||
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.82 | |
| PF03110 | 79 | SBP: SBP domain; InterPro: IPR004333 The SBP plant | 99.82 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.78 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.78 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.77 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.75 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.75 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.75 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.75 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.74 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.74 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.74 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.73 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.73 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.72 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.72 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.72 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.71 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.71 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.7 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.7 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.69 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.68 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.68 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.66 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.66 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.66 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.66 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.65 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.65 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.65 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.64 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.63 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.63 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.62 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.62 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.6 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.6 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.58 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.58 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.58 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.56 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.56 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.56 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.55 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.54 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.54 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.54 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.54 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.53 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.49 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.49 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.48 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.47 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.45 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.45 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.44 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.44 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.43 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.43 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.42 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.42 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.39 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.39 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.38 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.38 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.36 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.35 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.33 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.22 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.2 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.18 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.18 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.16 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.16 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.11 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.09 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.02 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.01 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.01 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 98.99 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 98.96 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 98.95 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 98.94 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 98.89 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 98.88 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 98.6 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 98.54 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.4 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 98.31 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.29 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.24 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.1 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.07 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.0 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 97.99 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 97.98 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 97.95 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 97.94 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 97.86 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 97.86 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 97.84 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 97.76 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.68 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 97.6 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 97.47 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.35 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 97.09 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 97.03 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 96.98 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 96.69 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 96.27 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.93 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 95.71 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.07 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 94.46 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 93.96 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 93.89 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 93.73 | |
| PF01833 | 85 | TIG: IPT/TIG domain; InterPro: IPR002909 This fami | 80.41 |
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-21 Score=190.90 Aligned_cols=138 Identities=22% Similarity=0.183 Sum_probs=110.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCchhhH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQK 666 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~dg~~~~~k 666 (865)
-|+||||||.-|+.+++++||.. .++. ++++|..|+||||+|+..|+-++||-||.. |+
T Consensus 38 ~Rt~LHwa~S~g~~eiv~fLlsq---~nv~-----~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~a------------ 97 (226)
T KOG4412|consen 38 GRTPLHWACSFGHVEIVYFLLSQ---PNVK-----PDDKDDAGWTPLHIAASNGNDEVVKELLNRSGA------------ 97 (226)
T ss_pred CCceeeeeeecCchhHHHHHHhc---CCCC-----CCCccccCCchhhhhhhcCcHHHHHHHhcCCCC------------
Confidence 57999999999999999999973 3443 335577899999999999999999999987 55
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
++|+++++|.|||||||.++..| |+.+|++. ||.++++|..|+||||.|+..|+.++|++|
T Consensus 98 ------------dvna~tn~G~T~LHyAagK~r~e-IaqlLle~------ga~i~~kD~~~qtplHRAAavGklkvie~L 158 (226)
T KOG4412|consen 98 ------------DVNATTNGGQTCLHYAAGKGRLE-IAQLLLEK------GALIRIKDKQGQTPLHRAAAVGKLKVIEYL 158 (226)
T ss_pred ------------CcceecCCCcceehhhhcCChhh-HHHHHHhc------CCCCcccccccCchhHHHHhccchhhHHHH
Confidence 46788888888888888887766 88888775 367788888888888888888888888888
Q ss_pred HHhh---hhcCCCCCceEeecC
Q 002922 747 QRKI---NKKSSESGRVILDIP 765 (865)
Q Consensus 747 ~~K~---~~~~~~~~~v~l~i~ 765 (865)
+... +..+ ..|.|+|+.+
T Consensus 159 i~~~a~~n~qD-k~G~TpL~~a 179 (226)
T KOG4412|consen 159 ISQGAPLNTQD-KYGFTPLHHA 179 (226)
T ss_pred HhcCCCCCccc-ccCccHHHHH
Confidence 8752 2223 3577887776
|
|
| >PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain [] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-22 Score=175.99 Aligned_cols=53 Identities=64% Similarity=1.041 Sum_probs=43.9
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 53 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~ 53 (865)
.|+||++|+++|+++||||||||||+|+||||+|||||++|++||+||||+++
T Consensus 26 ~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~ 78 (79)
T PF03110_consen 26 EHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ 78 (79)
T ss_dssp HHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred hhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence 38999999999999999999999999999999999999999999999999876
|
Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A. |
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-19 Score=188.51 Aligned_cols=158 Identities=15% Similarity=0.072 Sum_probs=112.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.++++.||+.+++.+. ..|+||||+|+..|+.++|++||++|++++. + |..+
T Consensus 30 G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~-----------~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpL 98 (284)
T PHA02791 30 GHSALYYAIADNNVRLVCTLLNAGALKNL-----------LENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTAL 98 (284)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCcCCCcC-----------CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 56999999999999999999988754221 1368999999999999999999999988763 2 2222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCc-hHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHHH
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYAS 735 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~-TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa 735 (865)
+..++++.+. .+++++|.++..|+ ||||+||..++.+ +|++|++.++ +..| ..|.||||+|+
T Consensus 99 h~Aa~~g~~eivk~Ll-~~gadin~~~~~g~~TpL~~Aa~~g~~e-ivk~LL~~~~--------~~~d~~~g~TpLh~Aa 168 (284)
T PHA02791 99 YYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVS-IVSYFLSEIP--------STFDLAILLSCIHITI 168 (284)
T ss_pred HHHHHcCCHHHHHHHH-HCCCCcCccCCCCCcHHHHHHHHcCCHH-HHHHHHhcCC--------cccccccCccHHHHHH
Confidence 3444555321 12567788888775 8888888887665 8888876531 1223 25888888888
Q ss_pred HcCCHHHHHHHHHhhhhcCC--CCCceE-eecCC
Q 002922 736 LRAHHSYIHLVQRKINKKSS--ESGRVI-LDIPG 766 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~~~~--~~~~v~-l~i~~ 766 (865)
++|+.+++++|+++.++... ..|+++ |+++.
T Consensus 169 ~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa 202 (284)
T PHA02791 169 KNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAI 202 (284)
T ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHH
Confidence 88888888888888655220 234444 55553
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=170.39 Aligned_cols=133 Identities=13% Similarity=0.130 Sum_probs=108.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC----HHHHHHHHhcCCCCCCCCCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC----RPMVELLLNYAPDNVLDKPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn----~eIVELLL~~Gadi~~dg~~~ 663 (865)
.+++||+|+..|+.+++++|+...... ..+...+.++..|.||||+|+.+|+ .+++++|+++|++
T Consensus 21 g~t~Lh~Aa~~g~~~~v~~l~~~~~~~---~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-------- 89 (169)
T PHA02741 21 GENFFHEAARCGCFDIIARFTPFIRGD---CHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-------- 89 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHhccc---hhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC--------
Confidence 468999999999999999997643110 0112233456779999999999999 5899999999864
Q ss_pred hhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHH
Q 002922 664 RQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742 (865)
Q Consensus 664 ~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ei 742 (865)
+|.++. .|+||||+|+..++.+ ++++|+..+ ++|++.+|.+|+||||+|...|+.++
T Consensus 90 ----------------in~~~~~~g~TpLh~A~~~~~~~-iv~~Ll~~~-----g~~~~~~n~~g~tpL~~A~~~~~~~i 147 (169)
T PHA02741 90 ----------------INAQEMLEGDTALHLAAHRRDHD-LAEWLCCQP-----GIDLHFCNADNKSPFELAIDNEDVAM 147 (169)
T ss_pred ----------------CCCCCcCCCCCHHHHHHHcCCHH-HHHHHHhCC-----CCCCCcCCCCCCCHHHHHHHCCCHHH
Confidence 567774 8999999999998776 999998642 47889999999999999999999999
Q ss_pred HHHHHHhhhhc
Q 002922 743 IHLVQRKINKK 753 (865)
Q Consensus 743 IeLL~~K~~~~ 753 (865)
+++|+++.+..
T Consensus 148 v~~L~~~~~~~ 158 (169)
T PHA02741 148 MQILREIVATS 158 (169)
T ss_pred HHHHHHHHHHh
Confidence 99999986643
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-18 Score=184.70 Aligned_cols=145 Identities=15% Similarity=0.062 Sum_probs=115.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--C-Cch-
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--K-PGS- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g-~~~- 663 (865)
.++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+.+|+.++|++|+++|++++. + | ..+
T Consensus 62 ~TpLh~Aa~~g~~eiV~lLL~~Gadvn---------~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL 132 (284)
T PHA02791 62 EFPLHQAATLEDTKIVKILLFSGMDDS---------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 132 (284)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHH
Confidence 599999999999999999998775422 2366799999999999999999999999998763 2 2 222
Q ss_pred ------hhHHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH-HHHHH
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYAS 735 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP-LHyAa 735 (865)
+..++|+.+... .++..| ..|.||||+||.+++.+ ++++|++. ||++|.+|..|.|| ||+|+
T Consensus 133 ~~Aa~~g~~eivk~LL~~---~~~~~d~~~g~TpLh~Aa~~g~~e-iv~lLL~~------gAd~n~~d~~g~t~~L~~Aa 202 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSE---IPSTFDLAILLSCIHITIKNGHVD-MMILLLDY------MTSTNTNNSLLFIPDIKLAI 202 (284)
T ss_pred HHHHHcCCHHHHHHHHhc---CCcccccccCccHHHHHHHcCCHH-HHHHHHHC------CCCCCcccCCCCChHHHHHH
Confidence 344555532211 123333 25899999999998776 99999875 58899999999987 99999
Q ss_pred HcCCHHHHHHHHHhhhh
Q 002922 736 LRAHHSYIHLVQRKINK 752 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~ 752 (865)
.+|+.+++++|+++.++
T Consensus 203 ~~~~~e~v~lLl~~Ga~ 219 (284)
T PHA02791 203 DNKDLEMLQALFKYDIN 219 (284)
T ss_pred HcCCHHHHHHHHHCCCC
Confidence 99999999999998665
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-18 Score=192.72 Aligned_cols=163 Identities=16% Similarity=0.140 Sum_probs=119.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC--HHHHHHHHhcCCCCCC--C--CC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC--RPMVELLLNYAPDNVL--D--KP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn--~eIVELLL~~Gadi~~--d--g~ 661 (865)
.++|||+|+..|+.++|++||+.+++.+ .++..|+||||+|+..++ .+++++||++|++++. + +.
T Consensus 72 G~TpLh~Aa~~g~~eiv~lLL~~GAdin---------~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~ 142 (446)
T PHA02946 72 GNYPLHIASKINNNRIVAMLLTHGADPN---------ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGC 142 (446)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCC---------CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCC
Confidence 4699999999999999999999875432 346789999999998764 8999999999998872 2 22
Q ss_pred ch------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh-HHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 662 GS------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 662 ~~------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~-e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
.+ +...+++... ..++++|.+|..|+||||+|+..++. .+++++|++. ||++|.+|.+|.||||+|
T Consensus 143 tpL~aa~~~~~~vv~~Ll-~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~------Gadin~~d~~G~TpLH~A 215 (446)
T PHA02946 143 GPLLACTDPSERVFKKIM-SIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL------GISPSKPDHDGNTPLHIV 215 (446)
T ss_pred cHHHHHHCCChHHHHHHH-hccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc------CCCCcccCCCCCCHHHHH
Confidence 22 2344444322 13567888888888888888765442 2378888664 477888888888888888
Q ss_pred HHcC--CHHHHHHHHHh--hhhcCCCCCceEeecCCC
Q 002922 735 SLRA--HHSYIHLVQRK--INKKSSESGRVILDIPGS 767 (865)
Q Consensus 735 a~rG--n~eiIeLL~~K--~~~~~~~~~~v~l~i~~~ 767 (865)
+.+| +.+++++|+.. ++.+. ..|+|+|+++..
T Consensus 216 a~~~~~~~~iv~lLl~gadin~~d-~~G~TpLh~A~~ 251 (446)
T PHA02946 216 CSKTVKNVDIINLLLPSTDVNKQN-KFGDSPLTLLIK 251 (446)
T ss_pred HHcCCCcHHHHHHHHcCCCCCCCC-CCCCCHHHHHHH
Confidence 8875 77888887752 34444 578888887643
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-18 Score=190.10 Aligned_cols=148 Identities=17% Similarity=0.072 Sum_probs=120.9
Q ss_pred cchHHHHHHH--CCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC------
Q 002922 588 FKWLLEFSME--HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD------ 659 (865)
Q Consensus 588 ~~tLL~fAve--rg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d------ 659 (865)
.+++||+++. .|+.++|++||+.|++.+. ..+.||||+|+..++.+||++||++|++...+
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~-----------~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~ 184 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK-----------IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLY 184 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC-----------CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhh
Confidence 4699999999 8899999999999865432 13479999999999999999999999843321
Q ss_pred ---CCc-------hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCC
Q 002922 660 ---KPG-------SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLT 729 (865)
Q Consensus 660 ---g~~-------~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~T 729 (865)
+.+ .+.+++++.+. .+++++|.+|..|.||||+||..++.+ ++++|++. ||++|++|..|+|
T Consensus 185 ~~~~~t~l~~a~~~~~~eIve~LI-s~GADIN~kD~~G~TpLh~Aa~~g~~e-iVelLL~~------GAdIN~~d~~G~T 256 (437)
T PHA02795 185 KIIQYTRGFLVDEPTVLEIYKLCI-PYIEDINQLDAGGRTLLYRAIYAGYID-LVSWLLEN------GANVNAVMSNGYT 256 (437)
T ss_pred hhhccchhHHHHhcCHHHHHHHHH-hCcCCcCcCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCC
Confidence 111 13567777433 247899999999999999999997766 99999764 5899999999999
Q ss_pred HHHHHHHcCC--------HHHHHHHHHhhhhcC
Q 002922 730 PNDYASLRAH--------HSYIHLVQRKINKKS 754 (865)
Q Consensus 730 PLHyAa~rGn--------~eiIeLL~~K~~~~~ 754 (865)
|||+|+.+|+ .+++++|+++.++..
T Consensus 257 pLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 257 CLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred HHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999984 689999999877544
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-18 Score=188.57 Aligned_cols=162 Identities=17% Similarity=0.099 Sum_probs=103.0
Q ss_pred cccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhh
Q 002922 586 KRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 586 ~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~ 665 (865)
....++||+|+..|..++|++||+.+++.+ ..+..|.||||.|+..|+.++|++|+++|++..........
T Consensus 33 ~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n---------~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~ 103 (434)
T PHA02874 33 DETTTPLIDAIRSGDAKIVELFIKHGADIN---------HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIE 103 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCC
Confidence 345699999999999999999999875432 22456889999999999999999999999865321000011
Q ss_pred HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
.++++... ..++++|.++..|.||||+|+..++.+ +|++|++. |+++|.+|.+|.||||+|+.+|+.+++++
T Consensus 104 ~~~i~~ll-~~g~d~n~~~~~g~T~Lh~A~~~~~~~-~v~~Ll~~------gad~n~~d~~g~tpLh~A~~~~~~~iv~~ 175 (434)
T PHA02874 104 KDMIKTIL-DCGIDVNIKDAELKTFLHYAIKKGDLE-SIKMLFEY------GADVNIEDDNGCYPIHIAIKHNFFDIIKL 175 (434)
T ss_pred HHHHHHHH-HCcCCCCCCCCCCccHHHHHHHCCCHH-HHHHHHhC------CCCCCCcCCCCCCHHHHHHHCCcHHHHHH
Confidence 22222111 114456666666666666666665544 66666543 35556666666666666666666666666
Q ss_pred HHHhhhh---cCCCCCceEeecC
Q 002922 746 VQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 746 L~~K~~~---~~~~~~~v~l~i~ 765 (865)
|.++..+ +. ..|.++|+++
T Consensus 176 Ll~~g~~~n~~~-~~g~tpL~~A 197 (434)
T PHA02874 176 LLEKGAYANVKD-NNGESPLHNA 197 (434)
T ss_pred HHHCCCCCCCCC-CCCCCHHHHH
Confidence 6655432 22 3455555554
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.7e-18 Score=171.89 Aligned_cols=160 Identities=14% Similarity=0.075 Sum_probs=123.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC--CHHHHHHHHhcCCCCCC-C---C
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN--CRPMVELLLNYAPDNVL-D---K 660 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g--n~eIVELLL~~Gadi~~-d---g 660 (865)
|..++|+.|+..|..++||.|++.+ + ..+..|.||||+|+.++ +.++|++||++|++++. + +
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~~---n---------~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g 87 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKFV---N---------DCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNN 87 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHhh---h---------ccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCC
Confidence 5579999999999999999998642 1 22556999999999865 89999999999999873 1 2
Q ss_pred Cch----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcC-ChHHHHHHhhcCCCCCCccccccccCCCCCC
Q 002922 661 PGS----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRD-DAENVLDALTDDPGSVGIEAWKSAQDSTGLT 729 (865)
Q Consensus 661 ~~~----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~-~~e~IVelLL~dp~~Ig~gA~VNakD~~G~T 729 (865)
..+ ...++++.+.. +++++|.+|..|.||||+|+... +..+++++|++. |+++|.+|.+|.|
T Consensus 88 ~TpLh~a~~~~~~~~~eiv~~Ll~-~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~------gadin~~d~~g~t 160 (209)
T PHA02859 88 LSALHHYLSFNKNVEPEILKILID-SGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS------GVSFLNKDFDNNN 160 (209)
T ss_pred CCHHHHHHHhCccccHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc------CCCcccccCCCCc
Confidence 222 13556664332 37899999999999999988642 234499999764 5889999999999
Q ss_pred HHHH-HHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 730 PNDY-ASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 730 PLHy-Aa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|||. |+.+++.+++++|+++..+ +. ..|.++|+++.
T Consensus 161 ~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d-~~g~tpl~la~ 200 (209)
T PHA02859 161 ILYSYILFHSDKKIFDFLTSLGIDINETN-KSGYNCYDLIK 200 (209)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHh
Confidence 9995 6678899999999987554 33 46777777754
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-18 Score=171.74 Aligned_cols=127 Identities=24% Similarity=0.181 Sum_probs=111.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
-+|||.|+..|.-+|||-||+.- +.+++..+..|.|+||+|+.+|..+|+.+||.+|+.
T Consensus 73 WtPlhia~s~g~~evVk~Ll~r~--------~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~------------- 131 (226)
T KOG4412|consen 73 WTPLHIAASNGNDEVVKELLNRS--------GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL------------- 131 (226)
T ss_pred CchhhhhhhcCcHHHHHHHhcCC--------CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCC-------------
Confidence 38999999999999999999772 123344577899999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
|+++|..|.||||-||.-|+.+ ++++|+. .+|-+|..|..|+||||+|.--||.++..+|++
T Consensus 132 -----------i~~kD~~~qtplHRAAavGklk-vie~Li~------~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~ 193 (226)
T KOG4412|consen 132 -----------IRIKDKQGQTPLHRAAAVGKLK-VIEYLIS------QGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVR 193 (226)
T ss_pred -----------CcccccccCchhHHHHhccchh-hHHHHHh------cCCCCCcccccCccHHHHHHhccCchHHHHHHH
Confidence 6889999999999999998887 9999965 457789999999999999977899999999999
Q ss_pred hhhhcC
Q 002922 749 KINKKS 754 (865)
Q Consensus 749 K~~~~~ 754 (865)
+.++..
T Consensus 194 ~gAd~~ 199 (226)
T KOG4412|consen 194 AGADTD 199 (226)
T ss_pred hcccee
Confidence 987643
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=186.12 Aligned_cols=159 Identities=18% Similarity=0.128 Sum_probs=125.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
..++||+|+..|..+++++||+.+++.+ ..+..|.||||+|+.+|+.+++++|+++|++.+. .|..+
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll~~gad~n---------~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL 194 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLFEYGADVN---------IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPL 194 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHHhCCCCCC---------CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4699999999999999999999875432 2356799999999999999999999999997763 23222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+...+++... .++.+++.++..|.||||+|+..+ .+ ++++|+. ++++|.+|.+|+||||||+..
T Consensus 195 ~~A~~~g~~~iv~~Ll-~~g~~i~~~~~~g~TpL~~A~~~~-~~-~i~~Ll~-------~~~in~~d~~G~TpLh~A~~~ 264 (434)
T PHA02874 195 HNAAEYGDYACIKLLI-DHGNHIMNKCKNGFTPLHNAIIHN-RS-AIELLIN-------NASINDQDIDGSTPLHHAINP 264 (434)
T ss_pred HHHHHcCCHHHHHHHH-hCCCCCcCCCCCCCCHHHHHHHCC-hH-HHHHHHc-------CCCCCCcCCCCCCHHHHHHhc
Confidence 3344455322 235678899999999999999875 34 6777763 477899999999999999987
Q ss_pred C-CHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 738 A-HHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 738 G-n~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+ +.+++++|+.+.++ +. .+|.++|+++.
T Consensus 265 ~~~~~iv~~Ll~~gad~n~~d-~~g~TpL~~A~ 296 (434)
T PHA02874 265 PCDIDIIDILLYHKADISIKD-NKGENPIDTAF 296 (434)
T ss_pred CCcHHHHHHHHHCcCCCCCCC-CCCCCHHHHHH
Confidence 5 78999999987554 44 68999999874
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=183.45 Aligned_cols=146 Identities=18% Similarity=0.114 Sum_probs=91.6
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC----CCCch--
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL----DKPGS-- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~----dg~~~-- 663 (865)
+|||+|+..|+.+++++|++.+++.+. .+..+.||||.|++.|+.++|++|+++|++... +|..+
T Consensus 37 tpL~~A~~~~~~~~v~~Ll~~ga~~~~---------~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~ 107 (413)
T PHA02875 37 SPIKLAMKFRDSEAIKLLMKHGAIPDV---------KYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLH 107 (413)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccc---------cCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHH
Confidence 456666666666666666555432211 123455666666666666666666666654321 22221
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.+.. +++++|.++..|.||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+..|
T Consensus 108 ~A~~~~~~~iv~~Ll~-~gad~~~~~~~g~tpLh~A~~~~~~~-~v~~Ll~~------g~~~~~~d~~g~TpL~~A~~~g 179 (413)
T PHA02875 108 LATILKKLDIMKLLIA-RGADPDIPNTDKFSPLHLAVMMGDIK-GIELLIDH------KACLDIEDCCGCTPLIIAMAKG 179 (413)
T ss_pred HHHHhCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHhc------CCCCCCCCCCCCCHHHHHHHcC
Confidence 23344442221 25677888888888888888877665 78888664 3667888888888888888888
Q ss_pred CHHHHHHHHHhhhh
Q 002922 739 HHSYIHLVQRKINK 752 (865)
Q Consensus 739 n~eiIeLL~~K~~~ 752 (865)
+.+++++|++++++
T Consensus 180 ~~eiv~~Ll~~ga~ 193 (413)
T PHA02875 180 DIAICKMLLDSGAN 193 (413)
T ss_pred CHHHHHHHHhCCCC
Confidence 88888888877665
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=181.53 Aligned_cols=159 Identities=19% Similarity=0.116 Sum_probs=124.8
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch---
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS--- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~--- 663 (865)
++||+|+.+|..++++.||+.+...+ ...+..|+||||+|+..|+.++|++|+++|++.+. +|..+
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~ 141 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFAD--------DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHL 141 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCccc--------ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Confidence 69999999999999999998764311 11234689999999999999999999999998773 23322
Q ss_pred ----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCC-CCHHHHHHHcC
Q 002922 664 ----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTG-LTPNDYASLRA 738 (865)
Q Consensus 664 ----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G-~TPLHyAa~rG 738 (865)
+..++++... .+++++|.+|..|+||||+|+..++.+ ++++|++. ||++|..|.+| .||+|+|+.+|
T Consensus 142 A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~TpL~~A~~~g~~e-iv~~Ll~~------ga~~n~~~~~~~~t~l~~A~~~~ 213 (413)
T PHA02875 142 AVMMGDIKGIELLI-DHKACLDIEDCCGCTPLIIAMAKGDIA-ICKMLLDS------GANIDYFGKNGCVAALCYAIENN 213 (413)
T ss_pred HHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHhC------CCCCCcCCCCCCchHHHHHHHcC
Confidence 3344455322 236789999999999999999998776 99999875 58889999887 58999999999
Q ss_pred CHHHHHHHHHhhhhcC-----CCCCceEeec
Q 002922 739 HHSYIHLVQRKINKKS-----SESGRVILDI 764 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~-----~~~~~v~l~i 764 (865)
+.+++++|+++.++.. .+.+.+.+++
T Consensus 214 ~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~ 244 (413)
T PHA02875 214 KIDIVRLFIKRGADCNIMFMIEGEECTILDM 244 (413)
T ss_pred CHHHHHHHHHCCcCcchHhhcCCCchHHHHH
Confidence 9999999999987743 1345555553
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-18 Score=193.02 Aligned_cols=163 Identities=25% Similarity=0.232 Sum_probs=125.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCc--h--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPG--S-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg~~--~-- 663 (865)
-++||||+-+|..+|+++||+.+++.|.- + ...+-||||+|+++|+..||++||++|||.+. |..| +
T Consensus 79 ~tlLHWAAiNNrl~v~r~li~~gadvn~~-g-------G~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lH 150 (600)
T KOG0509|consen 79 VTLLHWAAINNRLDVARYLISHGADVNAI-G-------GVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLH 150 (600)
T ss_pred ccceeHHHHcCcHHHHHHHHHcCCCcccc-C-------CCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHH
Confidence 38999999999999999999998654431 1 13477999999999999999999999999873 4332 1
Q ss_pred -----hhHHHHh-hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHHHH
Q 002922 664 -----RQKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYASL 736 (865)
Q Consensus 664 -----~~k~LV~-~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~ 736 (865)
..-.+|. ..++ ++++|.+|.+|+||||+||.++...+ +..||.- +|.++.+| ..|.||||.|+.
T Consensus 151 la~~~~~~~~vayll~~--~~d~d~~D~~grTpLmwAaykg~~~~-v~~LL~f------~a~~~~~d~~~g~TpLHwa~~ 221 (600)
T KOG0509|consen 151 LAAQFGHTALVAYLLSK--GADIDLRDNNGRTPLMWAAYKGFALF-VRRLLKF------GASLLLTDDNHGNTPLHWAVV 221 (600)
T ss_pred HHHHhCchHHHHHHHHh--cccCCCcCCCCCCHHHHHHHhcccHH-HHHHHHh------cccccccccccCCchHHHHHh
Confidence 2223333 3333 37899999999999999999987664 7777663 46678888 789999999999
Q ss_pred cCCHHHHHHHHHhhh--hcCCCCCceEeecCCCc
Q 002922 737 RAHHSYIHLVQRKIN--KKSSESGRVILDIPGSI 768 (865)
Q Consensus 737 rGn~eiIeLL~~K~~--~~~~~~~~v~l~i~~~~ 768 (865)
+||.+.+.||.+-.+ +++..||+++++++.+.
T Consensus 222 ~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 222 GGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 999999995544322 23336789999998766
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-17 Score=160.88 Aligned_cols=132 Identities=17% Similarity=0.094 Sum_probs=101.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCH---HHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCR---PMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~---eIVELLL~~Gadi~~dg~~~~ 664 (865)
-.++||+|+.+|. ++++++......+.+ .......+..|+||||+|+..++. +++++|+++|++
T Consensus 17 g~tpLh~A~~~g~--~~~l~~~~~~~~~~~--~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad--------- 83 (154)
T PHA02736 17 GENILHYLCRNGG--VTDLLAFKNAISDEN--RYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD--------- 83 (154)
T ss_pred CCCHHHHHHHhCC--HHHHHHHHHHhcchh--HHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC---------
Confidence 4699999999997 344443322111110 001123466799999999999987 468899999864
Q ss_pred hHHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHH
Q 002922 665 QKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI 743 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiI 743 (865)
+|.++ ..|+||||+|+..++.+ ++++|+..+ ++++|.+|..|+||||+|+..|+.+++
T Consensus 84 ---------------in~~~~~~g~T~Lh~A~~~~~~~-i~~~Ll~~~-----g~d~n~~~~~g~tpL~~A~~~~~~~i~ 142 (154)
T PHA02736 84 ---------------INGKERVFGNTPLHIAVYTQNYE-LATWLCNQP-----GVNMEILNYAFKTPYYVACERHDAKMM 142 (154)
T ss_pred ---------------ccccCCCCCCcHHHHHHHhCCHH-HHHHHHhCC-----CCCCccccCCCCCHHHHHHHcCCHHHH
Confidence 56777 48999999999998776 999998632 578899999999999999999999999
Q ss_pred HHHHHhhhhc
Q 002922 744 HLVQRKINKK 753 (865)
Q Consensus 744 eLL~~K~~~~ 753 (865)
++|+++.++.
T Consensus 143 ~~Ll~~ga~~ 152 (154)
T PHA02736 143 NILRAKGAQC 152 (154)
T ss_pred HHHHHcCCCC
Confidence 9999887653
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-17 Score=186.76 Aligned_cols=159 Identities=16% Similarity=0.104 Sum_probs=120.0
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CC--------
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DK-------- 660 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg-------- 660 (865)
+|||+|+..|+.++|+.||+.+++.+ ..+..|+||||+|+..|+.++|+.|++.+.+... .+
T Consensus 39 tPLh~A~~~g~~e~vk~Ll~~gadvn---------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~ 109 (477)
T PHA02878 39 IPLHQAVEARNLDVVKSLLTRGHNVN---------QPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAF 109 (477)
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHH
Confidence 79999999999999999999875432 2356799999999999888888888876543211 00
Q ss_pred ---C----------------c-------------hhhHHHHhhhcCCcccCCcccCCC-CchHHHHHHhcCChHHHHHHh
Q 002922 661 ---P----------------G-------------SRQKQLVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 661 ---~----------------~-------------~~~k~LV~~~s~~y~~d~Na~d~~-G~TPLHlAA~~~~~e~IVelL 707 (865)
. . ....++++... .+++++|.++.. |+||||+||..++.+ ++++|
T Consensus 110 ~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll-~~gadin~~~~~~g~tpLh~A~~~~~~~-iv~~L 187 (477)
T PHA02878 110 NNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLL-SYGADINMKDRHKGNTALHYATENKDQR-LTELL 187 (477)
T ss_pred HcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHH-HcCCCCCccCCCCCCCHHHHHHhCCCHH-HHHHH
Confidence 0 0 00112444222 236788999888 999999999988766 99999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 708 L~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
++. ||++|.+|..|.||||+|+..|+.+++++|+++.++ +. ..|.++||++-
T Consensus 188 l~~------gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d-~~g~TpLh~A~ 242 (477)
T PHA02878 188 LSY------GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARD-KCGNTPLHISV 242 (477)
T ss_pred HHC------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHH
Confidence 764 478899999999999999999999999999987554 44 57888888874
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=186.49 Aligned_cols=145 Identities=19% Similarity=0.125 Sum_probs=98.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+.+|..+++++||+.+++.+ ..+..|.||||.|++.++.++|++|+++|++++. + |..+
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~gad~n---------~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpL 238 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVN---------IPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPL 238 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 5699999999999999999999875432 2366799999999999999999999999987652 1 2221
Q ss_pred -------hhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
...++++.+.. .++++|.++. .|.||||+|+ ++. +++++|++. |||+|++|.+|.||||+|+
T Consensus 239 h~A~~~~~~~~iv~~Ll~-~gadvn~~~~~~g~TpLh~A~--~~~-~~v~~Ll~~------gadin~~d~~g~TpL~~A~ 308 (477)
T PHA02878 239 HISVGYCKDYDILKLLLE-HGVDVNAKSYILGLTALHSSI--KSE-RKLKLLLEY------GADINSLNSYKLTPLSSAV 308 (477)
T ss_pred HHHHHhcCCHHHHHHHHH-cCCCCCccCCCCCCCHHHHHc--cCH-HHHHHHHHC------CCCCCCcCCCCCCHHHHHH
Confidence 12233332211 2456666664 5777777773 223 367777553 4666777777777777777
Q ss_pred HcC-CHHHHHHHHHhhh
Q 002922 736 LRA-HHSYIHLVQRKIN 751 (865)
Q Consensus 736 ~rG-n~eiIeLL~~K~~ 751 (865)
..+ +.+++++|+.++.
T Consensus 309 ~~~~~~~~~~~li~~~~ 325 (477)
T PHA02878 309 KQYLCINIGRILISNIC 325 (477)
T ss_pred HHcCccchHHHHHHHHH
Confidence 643 4556666666543
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-17 Score=160.10 Aligned_cols=131 Identities=15% Similarity=0.049 Sum_probs=102.8
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHH---HHHHHhcCCCCCCCCCchhh
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPM---VELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eI---VELLL~~Gadi~~dg~~~~~ 665 (865)
+..||+|+..|..+.++.+++.+... +...+..+..|+||||+|+.+|+.++ |++|+++|++
T Consensus 21 ~~~l~~a~~~g~~~~l~~~~~~l~~~-----g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad---------- 85 (166)
T PHA02743 21 QNTFLRICRTGNIYELMEVAPFISGD-----GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD---------- 85 (166)
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHhhc-----chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC----------
Confidence 47899999999885444333322110 11122346679999999999988654 8999999864
Q ss_pred HHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
+|.++ ..|.||||+|+..++.+ ++++|+.. .+++++.+|..|+||||+|+.+|+.++++
T Consensus 86 --------------in~~d~~~g~TpLh~A~~~g~~~-iv~~Ll~~-----~gad~~~~d~~g~tpL~~A~~~~~~~iv~ 145 (166)
T PHA02743 86 --------------INARELGTGNTLLHIAASTKNYE-LAEWLCRQ-----LGVNLGAINYQHETAYHIAYKMRDRRMME 145 (166)
T ss_pred --------------CCCCCCCCCCcHHHHHHHhCCHH-HHHHHHhc-----cCCCccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 57787 48999999999998776 99999742 25788999999999999999999999999
Q ss_pred HHHHhhhhcC
Q 002922 745 LVQRKINKKS 754 (865)
Q Consensus 745 LL~~K~~~~~ 754 (865)
+|+.+.++..
T Consensus 146 ~Ll~~ga~~~ 155 (166)
T PHA02743 146 ILRANGAVCD 155 (166)
T ss_pred HHHHcCCCCC
Confidence 9999987655
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.3e-17 Score=180.76 Aligned_cols=150 Identities=21% Similarity=0.191 Sum_probs=119.9
Q ss_pred cchHHHHHHHCC--CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--C--
Q 002922 588 FKWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--K-- 660 (865)
Q Consensus 588 ~~tLL~fAverg--~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g-- 660 (865)
..++||+|+..| ..+++++|++.+++.+ ..+..|.||||+|+..|+.++|++|+++|++.+. + +
T Consensus 141 g~t~L~~A~~~~~~~~~iv~~Ll~~g~din---------~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 211 (480)
T PHA03100 141 GENLLHLYLESNKIDLKILKLLIDKGVDIN---------AKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLL 211 (480)
T ss_pred CCcHHHHHHHcCCChHHHHHHHHHCCCCcc---------cccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCc
Confidence 468999999999 8999999998875422 2355799999999999999999999999998763 1 1
Q ss_pred ----Cch-------hh--HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCC
Q 002922 661 ----PGS-------RQ--KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTG 727 (865)
Q Consensus 661 ----~~~-------~~--k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G 727 (865)
..+ +. ..+++... .+++++|.+|..|.||||+|+..++.+ ++++|++. |||+|.+|.+|
T Consensus 212 ~~~~~t~l~~a~~~~~~~~~iv~~Ll-~~g~din~~d~~g~TpL~~A~~~~~~~-iv~~Ll~~------gad~n~~d~~g 283 (480)
T PHA03100 212 FTIFETPLHIAACYNEITLEVVNYLL-SYGVPINIKDVYGFTPLHYAVYNNNPE-FVKYLLDL------GANPNLVNKYG 283 (480)
T ss_pred HHHHHhHHHHHHHhCcCcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCC
Confidence 110 12 44555332 236789999999999999999998766 99999874 47899999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 728 LTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 728 ~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
.||||+|+.+++.+++++|+++.++..
T Consensus 284 ~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 284 DTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred CcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 999999999999999999998866533
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=181.56 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=115.2
Q ss_pred ccchHHHHHHHC--CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC----CHHHHHHHHhcCCCCCC-C
Q 002922 587 RFKWLLEFSMEH--DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN----CRPMVELLLNYAPDNVL-D 659 (865)
Q Consensus 587 R~~tLL~fAver--g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g----n~eIVELLL~~Gadi~~-d 659 (865)
+.++|||+|+.. ++.+++++||+.|++.+. ..+..|.||||.|++.+ +.++|++||++|++++. +
T Consensus 144 ~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~--------~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~ 215 (494)
T PHA02989 144 RGYNLLHMYLESFSVKKDVIKILLSFGVNLFE--------KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNN 215 (494)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHcCCCccc--------cccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccC
Confidence 356999999865 578999999998854221 02557999999998765 99999999999998874 2
Q ss_pred --CCch-------------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC
Q 002922 660 --KPGS-------------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD 724 (865)
Q Consensus 660 --g~~~-------------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD 724 (865)
+... ....+++.... ++++|.+|..|+||||+||..++.+ ++++|++. |||+|++|
T Consensus 216 ~~~~t~l~~~~~~~~~~~~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~-~v~~LL~~------Gadin~~d 286 (494)
T PHA02989 216 NGSESVLESFLDNNKILSKKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYE-AFNYLLKL------GDDIYNVS 286 (494)
T ss_pred CccccHHHHHHHhchhhcccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHH-HHHHHHHc------CCCccccC
Confidence 1111 12233333332 3789999999999999999998766 99999874 58999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
..|.||||||+.+|+.+++++|.++
T Consensus 287 ~~G~TpL~~A~~~~~~~iv~~LL~~ 311 (494)
T PHA02989 287 KDGDTVLTYAIKHGNIDMLNRILQL 311 (494)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999999999999988765
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-16 Score=178.86 Aligned_cols=162 Identities=19% Similarity=0.106 Sum_probs=112.7
Q ss_pred cchHHHHHH--HCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC--CHHHHHHHHhcCCCCCC-C--C
Q 002922 588 FKWLLEFSM--EHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN--CRPMVELLLNYAPDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAv--erg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g--n~eIVELLL~~Gadi~~-d--g 660 (865)
.+++||+|+ .+++.+++++||+.+++. ...+..|.||||.|+..+ +.+++++|+++|++.+. + +
T Consensus 117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad~---------~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g 187 (471)
T PHA03095 117 GRTPLHVYLSGFNINPKVIRLLLRKGADV---------NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRF 187 (471)
T ss_pred CCCHHHHHhhCCcCCHHHHHHHHHcCCCC---------CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCC
Confidence 346777777 344567777777665432 223556778888887765 57788888888876652 1 2
Q ss_pred Cch---------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh-HHHHHHhhcCCCCCCccccccccCCCCCCH
Q 002922 661 PGS---------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-ENVLDALTDDPGSVGIEAWKSAQDSTGLTP 730 (865)
Q Consensus 661 ~~~---------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~-e~IVelLL~dp~~Ig~gA~VNakD~~G~TP 730 (865)
..+ ....+++... ..++++|.+|..|+||||+||..++. ..+++.|+.. ++++|.+|.+|+||
T Consensus 188 ~t~Lh~~~~~~~~~~~i~~~Ll-~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~------g~din~~d~~g~Tp 260 (471)
T PHA03095 188 RSLLHHHLQSFKPRARIVRELI-RAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIA------GISINARNRYGQTP 260 (471)
T ss_pred CCHHHHHHHHCCCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHc------CCCCCCcCCCCCCH
Confidence 111 1222333211 12578899999999999999988753 2367777664 47889999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 731 NDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 731 LHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
||+|+..|+.+++++|+++.++ +. .+|.++|+++-
T Consensus 261 Lh~A~~~~~~~~v~~LL~~gad~n~~~-~~g~tpl~~A~ 298 (471)
T PHA03095 261 LHYAAVFNNPRACRRLIALGADINAVS-SDGNTPLSLMV 298 (471)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHH
Confidence 9999999999999999988665 34 57888888863
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.3e-17 Score=179.93 Aligned_cols=161 Identities=19% Similarity=0.137 Sum_probs=129.4
Q ss_pred cchHHHHHH--HCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC--CHHHHHHHHhcCCCCCC-C--C
Q 002922 588 FKWLLEFSM--EHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN--CRPMVELLLNYAPDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAv--erg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g--n~eIVELLL~~Gadi~~-d--g 660 (865)
..++||+|+ ..|..+++++|++.+++.+ ..+..|.||||.|+..+ +.++|++|+++|++++. + |
T Consensus 106 g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g 176 (480)
T PHA03100 106 GITPLLYAISKKSNSYSIVEYLLDNGANVN---------IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYG 176 (480)
T ss_pred CCchhhHHHhcccChHHHHHHHHHcCCCCC---------ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCC
Confidence 468999999 9999999999999875432 23567999999999999 99999999999998763 2 3
Q ss_pred Cch-------hhHHHHhhhcCCcccCCcccCCCC------chHHHHHHhcCC--hHHHHHHhhcCCCCCCccccccccCC
Q 002922 661 PGS-------RQKQLVDRAGSGFIFKPNVIGPAG------LTPLHVAACRDD--AENVLDALTDDPGSVGIEAWKSAQDS 725 (865)
Q Consensus 661 ~~~-------~~k~LV~~~s~~y~~d~Na~d~~G------~TPLHlAA~~~~--~e~IVelLL~dp~~Ig~gA~VNakD~ 725 (865)
..+ ...++++... .++++++..+..| .||||+|+..++ .+ ++++|++. |+++|.+|.
T Consensus 177 ~tpL~~A~~~~~~~iv~~Ll-~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~-iv~~Ll~~------g~din~~d~ 248 (480)
T PHA03100 177 YTPLHIAVEKGNIDVIKFLL-DNGADINAGDIETLLFTIFETPLHIAACYNEITLE-VVNYLLSY------GVPINIKDV 248 (480)
T ss_pred CCHHHHHHHhCCHHHHHHHH-HcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHH-HHHHHHHc------CCCCCCCCC
Confidence 222 2344455322 1367889998888 999999999876 55 99999774 478999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 726 TGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 726 ~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
.|.||||+|+.+|+.+++++|+++.++ +. .+|.++++++-
T Consensus 249 ~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d-~~g~tpl~~A~ 291 (480)
T PHA03100 249 YGFTPLHYAVYNNNPEFVKYLLDLGANPNLVN-KYGDTPLHIAI 291 (480)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCcHHHHHH
Confidence 999999999999999999999998765 33 57888888874
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-16 Score=179.66 Aligned_cols=147 Identities=16% Similarity=0.050 Sum_probs=111.9
Q ss_pred cchHHHHHHHCC---CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC---HHHHHHHHhcCCCCCC--C
Q 002922 588 FKWLLEFSMEHD---WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYAPDNVL--D 659 (865)
Q Consensus 588 ~~tLL~fAverg---~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn---~eIVELLL~~Gadi~~--d 659 (865)
.++|||+|+.++ ..+++++|++.|++.+ ..+..|.||||+|++.++ .++|++||++|++++. +
T Consensus 109 G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn---------~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~ 179 (489)
T PHA02798 109 GETPLYCLLSNGYINNLEILLFMIENGADTT---------LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN 179 (489)
T ss_pred cCcHHHHHHHcCCcChHHHHHHHHHcCCCcc---------ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC
Confidence 468999999875 6789999998875432 346678889998888887 8888888888887652 1
Q ss_pred --CCch---------------hhHHHHh------------------------------------hhcCCcccCCcccCCC
Q 002922 660 --KPGS---------------RQKQLVD------------------------------------RAGSGFIFKPNVIGPA 686 (865)
Q Consensus 660 --g~~~---------------~~k~LV~------------------------------------~~s~~y~~d~Na~d~~ 686 (865)
+..+ ..+.|++ .... .+++|.+|..
T Consensus 180 ~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~--~~dvN~~d~~ 257 (489)
T PHA02798 180 KEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS--YIDINQVDEL 257 (489)
T ss_pred cCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh--cCCCCCcCcC
Confidence 1111 0111111 1000 2578999999
Q ss_pred CchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 687 GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 687 G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
|+||||+||..++.+ ++++|++. |||+|++|.+|+||||+|+.+|+.+++++|.++..+
T Consensus 258 G~TPL~~A~~~~~~~-~v~~LL~~------GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~ 316 (489)
T PHA02798 258 GFNPLYYSVSHNNRK-IFEYLLQL------GGDINIITELGNTCLFTAFENESKFIFNSILNKKPN 316 (489)
T ss_pred CccHHHHHHHcCcHH-HHHHHHHc------CCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCC
Confidence 999999999998766 99999874 588999999999999999999999999998876443
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-17 Score=187.52 Aligned_cols=131 Identities=25% Similarity=0.191 Sum_probs=103.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch---
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS--- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~--- 663 (865)
+|||||+.+|+..+|++||+.|++. ..+|..|.||||.||+.++..+|-+||.+|++++. | |..+
T Consensus 114 tPLHWAar~G~~~vv~lLlqhGAdp---------t~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmw 184 (600)
T KOG0509|consen 114 TPLHWAARNGHISVVDLLLQHGADP---------TLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMW 184 (600)
T ss_pred CcchHHHHcCcHHHHHHHHHcCCCC---------ceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHH
Confidence 8999999999999999999998653 44588899999999999999999999999998873 3 3322
Q ss_pred -hhH---HHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 -RQK---QLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 -~~k---~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
-+| ..+.... .|+..++.+| ..|.||||+|+..++.+ ++.+|++. +++.+..|.+|+||+++|..+
T Consensus 185 Aaykg~~~~v~~LL-~f~a~~~~~d~~~g~TpLHwa~~~gN~~-~v~Ll~~g------~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 185 AAYKGFALFVRRLL-KFGASLLLTDDNHGNTPLHWAVVGGNLT-AVKLLLEG------GADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHhcccHHHHHHH-HhcccccccccccCCchHHHHHhcCCcc-eEehhhhc------CCcccccccCCCCHHHHHHHh
Confidence 111 1122111 2355678887 89999999999999988 67755542 477899999999999999987
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-16 Score=177.35 Aligned_cols=158 Identities=18% Similarity=0.085 Sum_probs=120.7
Q ss_pred hHHHHHH--HCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 590 WLLEFSM--EHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 590 tLL~fAv--erg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+||.++ .....++++.||+.+++. +.++..|+||||+|++.|+.++|++||++|++++. + |..+
T Consensus 39 ~~Lh~~~~~~~~~~~iv~~Ll~~Gadv---------n~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpL 109 (446)
T PHA02946 39 HILHAYCGIKGLDERFVEELLHRGYSP---------NETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPL 109 (446)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHCcCCC---------CccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHH
Confidence 6777765 445789999999887542 23467899999999999999999999999999873 2 3322
Q ss_pred --------hhHHHHhhhcCCcccCCcc-cCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 664 --------RQKQLVDRAGSGFIFKPNV-IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 664 --------~~k~LV~~~s~~y~~d~Na-~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
...++++.+. .+++++|. .|..|.|||| ||..++.+ ++++|++ .+|++|++|.+|+||||+|
T Consensus 110 h~A~~~~~~~~e~v~lLl-~~Gadin~~~d~~g~tpL~-aa~~~~~~-vv~~Ll~------~gad~~~~d~~G~t~Lh~A 180 (446)
T PHA02946 110 YYLSGTDDEVIERINLLV-QYGAKINNSVDEEGCGPLL-ACTDPSER-VFKKIMS------IGFEARIVDKFGKNHIHRH 180 (446)
T ss_pred HHHHHcCCchHHHHHHHH-HcCCCcccccCCCCCcHHH-HHHCCChH-HHHHHHh------ccccccccCCCCCCHHHHH
Confidence 1234455332 24678885 6899999998 55555544 9999976 3588999999999999999
Q ss_pred HHcCC--HHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 735 SLRAH--HSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 735 a~rGn--~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+..++ .+++++|+++.++ ++ .+|.|+||++.
T Consensus 181 ~~~~~~~~~~v~~Ll~~Gadin~~d-~~G~TpLH~Aa 216 (446)
T PHA02946 181 LMSDNPKASTISWMMKLGISPSKPD-HDGNTPLHIVC 216 (446)
T ss_pred HHhcCCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHH
Confidence 88654 6899999998554 44 68999999974
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.5e-16 Score=184.86 Aligned_cols=159 Identities=13% Similarity=-0.056 Sum_probs=120.2
Q ss_pred cchHHHHHHHC--CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC--HHHHHHHHhcCCCCCC-C--C
Q 002922 588 FKWLLEFSMEH--DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC--RPMVELLLNYAPDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAver--g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn--~eIVELLL~~Gadi~~-d--g 660 (865)
.+++||+|+.+ +..+++++||+.+++.+ ..+..|.||||+|+++|+ .++|++||++|+|++. + |
T Consensus 177 G~TpLH~A~~n~~~~~eIVklLLe~GADVN---------~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G 247 (764)
T PHA02716 177 GYGILHAYLGNMYVDIDILEWLCNNGVNVN---------LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNG 247 (764)
T ss_pred CCcHHHHHHHhccCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 45899998754 46799999999875422 336679999999999995 5999999999999874 2 3
Q ss_pred Cchhh--------------------------------------------HHHHhhhcCCcccCCcccCCCCchHHHHHHh
Q 002922 661 PGSRQ--------------------------------------------KQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC 696 (865)
Q Consensus 661 ~~~~~--------------------------------------------k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~ 696 (865)
..+-. .++++.+. ..++++|.+|..|+||||+|+.
T Consensus 248 ~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLL-e~GAdIN~kD~~G~TPLH~Aaa 326 (764)
T PHA02716 248 MSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFL-QPGVKLHYKDSAGRTCLHQYIL 326 (764)
T ss_pred CCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHH-hCCCceeccCCCCCCHHHHHHH
Confidence 22210 11222111 1267899999999999999875
Q ss_pred c-CChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH--------------cCCHHHHHHHHHhhhh---cCCCCC
Q 002922 697 R-DDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL--------------RAHHSYIHLVQRKINK---KSSESG 758 (865)
Q Consensus 697 ~-~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~--------------rGn~eiIeLL~~K~~~---~~~~~~ 758 (865)
. ++..+++++|++. ||++|++|..|+||||+|+. .++.+++++|+++.++ +. ..|
T Consensus 327 ~~~~~~eIVklLLe~------GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn-~~G 399 (764)
T PHA02716 327 RHNISTDIIKLLHEY------GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVN-CLG 399 (764)
T ss_pred HhCCCchHHHHHHHc------CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcC-CCC
Confidence 3 2233499999764 58899999999999999875 3789999999998665 44 579
Q ss_pred ceEee
Q 002922 759 RVILD 763 (865)
Q Consensus 759 ~v~l~ 763 (865)
+++|+
T Consensus 400 ~TPLh 404 (764)
T PHA02716 400 YTPLT 404 (764)
T ss_pred CChHH
Confidence 99998
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-16 Score=188.58 Aligned_cols=146 Identities=18% Similarity=0.080 Sum_probs=113.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
...|+.|+..|+.++++.||+.+++.| ..|..|+||||+|+.+|+.++|++||++|+|++. | |..+
T Consensus 526 ~~~L~~Aa~~g~~~~l~~Ll~~G~d~n---------~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~ 596 (823)
T PLN03192 526 ASNLLTVASTGNAALLEELLKAKLDPD---------IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALW 596 (823)
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 478999999999999999998875533 3366799999999999999999999999998763 2 3322
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
++..+++.+.. +.. ......|.||||+||.+++.+ +++.|++. |||+|++|.+|+||||+|+..|
T Consensus 597 ~A~~~g~~~iv~~L~~-~~~--~~~~~~~~~~L~~Aa~~g~~~-~v~~Ll~~------Gadin~~d~~G~TpLh~A~~~g 666 (823)
T PLN03192 597 NAISAKHHKIFRILYH-FAS--ISDPHAAGDLLCTAAKRNDLT-AMKELLKQ------GLNVDSEDHQGATALQVAMAED 666 (823)
T ss_pred HHHHhCCHHHHHHHHh-cCc--ccCcccCchHHHHHHHhCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHCC
Confidence 23334442211 111 112345678899999887766 89988764 5889999999999999999999
Q ss_pred CHHHHHHHHHhhhhc
Q 002922 739 HHSYIHLVQRKINKK 753 (865)
Q Consensus 739 n~eiIeLL~~K~~~~ 753 (865)
+.+++++|+++.++.
T Consensus 667 ~~~iv~~Ll~~GAdv 681 (823)
T PLN03192 667 HVDMVRLLIMNGADV 681 (823)
T ss_pred cHHHHHHHHHcCCCC
Confidence 999999999987653
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7e-16 Score=167.28 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=101.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
...+|+.|+..|..+++++||+.|++.+.. .. ..+..|.||||+|++.++.+++++|+++||+
T Consensus 33 ~~~lL~~A~~~~~~eivk~LL~~GAdiN~~----~~-~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD------------ 95 (300)
T PHA02884 33 IANILYSSIKFHYTDIIDAILKLGADPEAP----FP-LSENSKTNPLIYAIDCDNDDAAKLLIRYGAD------------ 95 (300)
T ss_pred CCHHHHHHHHcCCHHHHHHHHHCCCCcccc----Cc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 458999999999999999999998654321 00 0134689999999999999999999999975
Q ss_pred HHhhhcCCcccCCccc-CCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVI-GPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~-d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+ +..|.||||+|+..++.+ ++++|++. ||++|.+|.+|.||||+|+..++..++.++
T Consensus 96 ------------VN~~~~~~g~TpLh~Aa~~~~~e-ivklLL~~------GAdin~kd~~G~TpL~~A~~~~~~~~~~~~ 156 (300)
T PHA02884 96 ------------VNRYAEEAKITPLYISVLHGCLK-CLEILLSY------GADINIQTNDMVTPIELALMICNNFLAFMI 156 (300)
T ss_pred ------------cCcccCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHhCChhHHHHh
Confidence 5665 457999999999998766 99999874 588999999999999999998776665444
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-16 Score=177.54 Aligned_cols=163 Identities=10% Similarity=0.030 Sum_probs=121.8
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc--CCHHHHHHHHhcCCCCCC----
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR--NCRPMVELLLNYAPDNVL---- 658 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~--gn~eIVELLL~~Gadi~~---- 658 (865)
..+|||.|+.. |..+++++||+.|++.+ ...+..|+||||+|+.. ++.++|++||++|++++.
T Consensus 108 g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin--------~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~ 179 (494)
T PHA02989 108 GVSPIVCFIYNSNINNCDMLRFLLSKGINVN--------DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSL 179 (494)
T ss_pred CCcHHHHHHHhcccCcHHHHHHHHHCCCCcc--------cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccc
Confidence 45899988765 67899999999875431 12356799999998865 588999999999998764
Q ss_pred CCCch-----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcC-----ChHHHHHHhhcCCCCCCccccccc
Q 002922 659 DKPGS-----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRD-----DAENVLDALTDDPGSVGIEAWKSA 722 (865)
Q Consensus 659 dg~~~-----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~-----~~e~IVelLL~dp~~Ig~gA~VNa 722 (865)
.+..+ ...++++.+.. .++++|.+|..|.||||.|+..+ +..+++++|+. +|++|.
T Consensus 180 ~g~tpL~~a~~~~~~~~~~~iv~~Ll~-~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-------~advn~ 251 (494)
T PHA02989 180 YGLTPMNIYLRNDIDVISIKVIKYLIK-KGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-------YIKINK 251 (494)
T ss_pred cCCChHHHHHhcccccccHHHHHHHHh-CCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-------CCCCCC
Confidence 12222 13445553221 26788999999999999877542 12347777754 488999
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 723 QDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 723 kD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|..|+||||+|+..|+.+++++|++++++ +. ..|.|+|+++-.
T Consensus 252 ~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d-~~G~TpL~~A~~ 298 (494)
T PHA02989 252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVS-KDGDTVLTYAIK 298 (494)
T ss_pred CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccC-CCCCCHHHHHHH
Confidence 999999999999999999999999998665 34 578899998743
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-16 Score=177.83 Aligned_cols=168 Identities=13% Similarity=0.021 Sum_probs=127.3
Q ss_pred cchHHHHHHHC-----CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC---CHHHHHHHHhcCCCCCC-
Q 002922 588 FKWLLEFSMEH-----DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVL- 658 (865)
Q Consensus 588 ~~tLL~fAver-----g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g---n~eIVELLL~~Gadi~~- 658 (865)
..+|||+|+.+ +..+++++|++.|++.| .++..|+||||.|+..+ +.+++++|+++|++++.
T Consensus 71 g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN---------~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~ 141 (489)
T PHA02798 71 YSTPLCTILSNIKDYKHMLDIVKILIENGADIN---------KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL 141 (489)
T ss_pred CCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC---------CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcccc
Confidence 45899998764 56899999999875433 33667999999999975 78999999999999873
Q ss_pred C--CCch-------hh---HHHHhhhcCCcccCCcccC-CCCchHHHHHHhcC---ChHHHHHHhhcCCCCCCc------
Q 002922 659 D--KPGS-------RQ---KQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRD---DAENVLDALTDDPGSVGI------ 716 (865)
Q Consensus 659 d--g~~~-------~~---k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~---~~e~IVelLL~dp~~Ig~------ 716 (865)
+ |..+ .. .++++.+.. .++++|.++ ..|.||||.|+..+ ...+++++|++.|+.+..
T Consensus 142 d~~g~tpL~~a~~~~~~~~~~vv~~Ll~-~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~ 220 (489)
T PHA02798 142 DKDGFTMLQVYLQSNHHIDIEIIKLLLE-KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHK 220 (489)
T ss_pred CCCCCcHHHHHHHcCCcchHHHHHHHHH-hCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCcccc
Confidence 2 3222 12 455553322 267888885 57999999998643 123489999877643321
Q ss_pred ---------------------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 717 ---------------------------EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 717 ---------------------------gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
++|+|.+|..|+||||+|+..|+.+++++|+++.+| +. ..|.|+|+++-
T Consensus 221 ~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d-~~G~TpL~~A~ 299 (489)
T PHA02798 221 KKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIIT-ELGNTCLFTAF 299 (489)
T ss_pred chHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccC-CCCCcHHHHHH
Confidence 368999999999999999999999999999998776 33 57899999874
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-16 Score=182.96 Aligned_cols=149 Identities=18% Similarity=0.060 Sum_probs=107.6
Q ss_pred cchHHHHHHHCC-CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch
Q 002922 588 FKWLLEFSMEHD-WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg-~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~ 663 (865)
..++||+|+..+ ..+++++|++.+++.+ ..+..|+||||+|+.+|+.++|++||++|++++. + +..+
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin---------~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~ 411 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVN---------ARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA 411 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCc---------cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCch
Confidence 458999998854 7888888888765432 3366799999999999999999999999988763 1 2111
Q ss_pred --------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 664 --------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 664 --------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
+...+++... .+++++|.+|..|+||||+||..+...+++++|++. ||++|.+|..|.||||+|+
T Consensus 412 Lh~A~~~~~~~~~vk~Ll-~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~------Gad~n~~d~~g~tpl~~a~ 484 (682)
T PHA02876 412 LHFALCGTNPYMSVKTLI-DRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDN------GADVNAINIQNQYPLLIAL 484 (682)
T ss_pred HHHHHHcCCHHHHHHHHH-hCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHC------CCCCCCCCCCCCCHHHHHH
Confidence 1122233211 125678888888899999988876444588888764 4778888888999998888
Q ss_pred HcCCHHHHHHHHHhhhhcC
Q 002922 736 LRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~~~ 754 (865)
.++ +++++|..+.++..
T Consensus 485 ~~~--~~v~~Ll~~~a~~~ 501 (682)
T PHA02876 485 EYH--GIVNILLHYGAELR 501 (682)
T ss_pred HhC--CHHHHHHHCCCCCC
Confidence 765 46788877766544
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=155.22 Aligned_cols=135 Identities=12% Similarity=-0.009 Sum_probs=103.1
Q ss_pred cchHHHHHHHCC--CHHHHHHHHHhhccCCccCCCCCchHHh-hccccHHHHHHHc---CCHHHHHHHHhcCCCCCC-C-
Q 002922 588 FKWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRR---NCRPMVELLLNYAPDNVL-D- 659 (865)
Q Consensus 588 ~~tLL~fAverg--~~aVvklLLd~ga~anV~~~~~s~~~~~-~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~-d- 659 (865)
..++||+|+.++ +.+++++||+.+++.+ ..+ ..|.||||+|+.. ++.+|+++||++|++++. +
T Consensus 51 g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn---------~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~ 121 (209)
T PHA02859 51 YETPIFSCLEKDKVNVEILKFLIENGADVN---------FKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDE 121 (209)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHCCCCCC---------ccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCC
Confidence 459999999865 8899999999875433 223 3689999999864 479999999999999883 2
Q ss_pred -CCch---------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCC
Q 002922 660 -KPGS---------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLT 729 (865)
Q Consensus 660 -g~~~---------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~T 729 (865)
|..+ ...++++.+. .+++++|.+|..|.||||.|+...+..+++++|++. |+++|++|..|+|
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li-~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~------Gadi~~~d~~g~t 194 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLI-DSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSL------GIDINETNKSGYN 194 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHH-HcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHc------CCCCCCCCCCCCC
Confidence 3222 1244555332 236889999999999999754433344499999764 5889999999999
Q ss_pred HHHHHHHcC
Q 002922 730 PNDYASLRA 738 (865)
Q Consensus 730 PLHyAa~rG 738 (865)
|||+|..++
T Consensus 195 pl~la~~~~ 203 (209)
T PHA02859 195 CYDLIKFRN 203 (209)
T ss_pred HHHHHhhhh
Confidence 999999875
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-15 Score=182.55 Aligned_cols=152 Identities=15% Similarity=0.081 Sum_probs=112.3
Q ss_pred cchHHHHHHHC--CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHH--------------cCCHHHHHHHHh
Q 002922 588 FKWLLEFSMEH--DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR--------------RNCRPMVELLLN 651 (865)
Q Consensus 588 ~~tLL~fAver--g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~--------------~gn~eIVELLL~ 651 (865)
.+++||+|+.. +..+++++||+.+++ + +.++..|+||||+|+. .++.++|++||+
T Consensus 317 G~TPLH~Aaa~~~~~~eIVklLLe~GAD--I-------N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~ 387 (764)
T PHA02716 317 GRTCLHQYILRHNISTDIIKLLHEYGND--L-------NEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLIS 387 (764)
T ss_pred CCCHHHHHHHHhCCCchHHHHHHHcCCC--C-------ccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHH
Confidence 56999998754 578999999988754 2 2346779999999876 368899999999
Q ss_pred cCCCCCC---CCCchh-----------hHHHHhhh-cC------------------------------------------
Q 002922 652 YAPDNVL---DKPGSR-----------QKQLVDRA-GS------------------------------------------ 674 (865)
Q Consensus 652 ~Gadi~~---dg~~~~-----------~k~LV~~~-s~------------------------------------------ 674 (865)
+|++++. .|..+- ..++++.+ ..
T Consensus 388 ~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~ 467 (764)
T PHA02716 388 LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDE 467 (764)
T ss_pred CCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhh
Confidence 9998773 232221 11222210 00
Q ss_pred -----------------CcccCCcccCCCCchHHHHHHhcCChH----HHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002922 675 -----------------GFIFKPNVIGPAGLTPLHVAACRDDAE----NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 733 (865)
Q Consensus 675 -----------------~y~~d~Na~d~~G~TPLHlAA~~~~~e----~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHy 733 (865)
-...++|++|..|+||||+||..++.+ +++++|++ .||++|++|.+|+||||+
T Consensus 468 ~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~------~GADIN~~d~~G~TPLh~ 541 (764)
T PHA02716 468 YEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLS------IQYNINIPTKNGVTPLML 541 (764)
T ss_pred hhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHh------CCCCCcccCCCCCCHHHH
Confidence 001356888999999999999987653 24699976 468999999999999999
Q ss_pred HHHcCCH-----HHHHHHHHhhhhcC
Q 002922 734 ASLRAHH-----SYIHLVQRKINKKS 754 (865)
Q Consensus 734 Aa~rGn~-----eiIeLL~~K~~~~~ 754 (865)
|+++|+. +++++|+++.++..
T Consensus 542 A~~~g~~~~~~~eIvk~LL~~ga~~~ 567 (764)
T PHA02716 542 TMRNNRLSGHQWYIVKNILDKRPNVD 567 (764)
T ss_pred HHHcCCccccHHHHHHHHHhcCCCcc
Confidence 9999976 99999998876544
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-15 Score=170.40 Aligned_cols=163 Identities=17% Similarity=0.032 Sum_probs=125.6
Q ss_pred cchHHHHHHHCC---CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC-CHHHHHHHHhcCCCCCC-C--C
Q 002922 588 FKWLLEFSMEHD---WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN-CRPMVELLLNYAPDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAverg---~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g-n~eIVELLL~~Gadi~~-d--g 660 (865)
.+++||+|+..+ ..++++.||+.+++.+. .+..|.||||+|+..+ +.+++++|+++|++++. + |
T Consensus 47 g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~---------~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g 117 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA---------PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVG 117 (471)
T ss_pred CCCHHHHHHHhcCCChHHHHHHHHHCCCCCCC---------CCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCC
Confidence 469999999998 99999999999865332 2557999999999999 59999999999998873 2 3
Q ss_pred Cch---------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC-hHHHHHHhhcCCCCCCccccccccCCCCCCH
Q 002922 661 PGS---------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD-AENVLDALTDDPGSVGIEAWKSAQDSTGLTP 730 (865)
Q Consensus 661 ~~~---------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~-~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP 730 (865)
..+ ...++++.+.. +++++|.+|..|.||||+|+..++ ..+++++|++. |++++..|..|+||
T Consensus 118 ~tpLh~a~~~~~~~~~iv~~Ll~-~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~------g~~~~~~d~~g~t~ 190 (471)
T PHA03095 118 RTPLHVYLSGFNINPKVIRLLLR-KGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDA------GADVYAVDDRFRSL 190 (471)
T ss_pred CCHHHHHhhCCcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHc------CCCCcccCCCCCCH
Confidence 222 12344553221 367899999999999999887653 23489999764 47778889999999
Q ss_pred HHHHHHc--CCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 731 NDYASLR--AHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 731 LHyAa~r--Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
||+|+.. ++.+++++|+++..+ +. ..|.++||++..
T Consensus 191 Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d-~~g~tpLh~Aa~ 231 (471)
T PHA03095 191 LHHHLQSFKPRARIVRELIRAGCDPAATD-MLGNTPLHSMAT 231 (471)
T ss_pred HHHHHHHCCCcHHHHHHHHHcCCCCcccC-CCCCCHHHHHHh
Confidence 9999874 788899988887554 44 578899998754
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-15 Score=178.66 Aligned_cols=161 Identities=18% Similarity=0.047 Sum_probs=123.3
Q ss_pred cchHHHHHHHCCCH-HHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcC-CHHHHHHHHhcCCCCCC-C--CCc
Q 002922 588 FKWLLEFSMEHDWC-AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRN-CRPMVELLLNYAPDNVL-D--KPG 662 (865)
Q Consensus 588 ~~tLL~fAverg~~-aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~g-n~eIVELLL~~Gadi~~-d--g~~ 662 (865)
.+++||+|+..+.. +++++|++.+++.+ ..+..|.||||+|+.+| +.+++++|+.+|++++. + +..
T Consensus 273 g~TpLh~Aa~~~~~~~iv~lLl~~gadin---------~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~T 343 (682)
T PHA02876 273 KNTPLHHASQAPSLSRLVPKLLERGADVN---------AKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYIT 343 (682)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCc
Confidence 46899999999876 68999998875432 23567999999999999 59999999999998773 2 221
Q ss_pred h--------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 663 S--------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 663 ~--------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
+ ....++.... .+++++|.+|..|.||||+||..++.+ ++++|++. ||+++..|..|.||||+|
T Consensus 344 pLh~A~~~~~~~~iv~lLl-~~gadin~~d~~G~TpLh~Aa~~~~~~-iv~~Ll~~------gad~~~~~~~g~T~Lh~A 415 (682)
T PHA02876 344 PLHQASTLDRNKDIVITLL-ELGANVNARDYCDKTPIHYAAVRNNVV-IINTLLDY------GADIEALSQKIGTALHFA 415 (682)
T ss_pred HHHHHHHhCCcHHHHHHHH-HcCCCCccCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCccccCCCCCchHHHH
Confidence 1 1233344221 236789999999999999999988766 99999764 478899999999999999
Q ss_pred HHcCC-HHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 735 SLRAH-HSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 735 a~rGn-~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+..++ ..++++|+.+.++ +. ..|.|+|+++.
T Consensus 416 ~~~~~~~~~vk~Ll~~gadin~~d-~~G~TpLh~Aa 450 (682)
T PHA02876 416 LCGTNPYMSVKTLIDRGANVNSKN-KDLSTPLHYAC 450 (682)
T ss_pred HHcCCHHHHHHHHHhCCCCCCcCC-CCCChHHHHHH
Confidence 88665 4567888887554 44 67999999984
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.2e-16 Score=153.47 Aligned_cols=136 Identities=25% Similarity=0.222 Sum_probs=110.1
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
.++.+|++.+....|+-||+.-++ ..+.+|.+|.||||+|+++|+.+||+.||.+|||
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an--------~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-------------- 122 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKAN--------HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-------------- 122 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccc--------cccccccccccHHHHHHhcCchHHHHHHHHccCC--------------
Confidence 578899999999999999976432 1235588899999999999999999999999875
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC-CHHHHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA-HHSYIHLVQR 748 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG-n~eiIeLL~~ 748 (865)
++++...||||||-|+.-++.+ ++-+||.+ |||||+....-+||||+|+-.. ....+++|..
T Consensus 123 ----------~~a~T~~GWTPLhSAckWnN~~-va~~LLqh------gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 123 ----------KEAKTNEGWTPLHSACKWNNFE-VAGRLLQH------GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLH 185 (228)
T ss_pred ----------cccccccCccchhhhhcccchh-HHHHHHhc------cCcccccccccchhhHHhhcccchHHHHHHHhh
Confidence 5788899999999999988887 99999764 6999999999999999999754 4556676654
Q ss_pred h--h--hhcCCCCCceEeecC
Q 002922 749 K--I--NKKSSESGRVILDIP 765 (865)
Q Consensus 749 K--~--~~~~~~~~~v~l~i~ 765 (865)
. + ..+. +++.+.++|+
T Consensus 186 dryi~pg~~n-n~eeta~~iA 205 (228)
T KOG0512|consen 186 DRYIHPGLKN-NLEETAFDIA 205 (228)
T ss_pred ccccChhhhc-CccchHHHHH
Confidence 2 2 2234 5677777775
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-15 Score=169.57 Aligned_cols=160 Identities=9% Similarity=-0.056 Sum_probs=124.0
Q ss_pred HHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHH--cCCHHHHHHHHhcCCCCCC-CCCch-------
Q 002922 594 FSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR--RNCRPMVELLLNYAPDNVL-DKPGS------- 663 (865)
Q Consensus 594 fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~--~gn~eIVELLL~~Gadi~~-dg~~~------- 663 (865)
||+..+..+++++|+..+++.++-. .....+..++|+||.|+. .|+.++|++||++|||++. ++..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~---~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~ 159 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFS---IIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIECLNAYFRGICK 159 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhh---hhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHc
Confidence 8999999999999999886644210 111345568999999999 9999999999999999874 32211
Q ss_pred hhHHHHh-hhcCCcccCCccc------CCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 RQKQLVD-RAGSGFIFKPNVI------GPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 ~~k~LV~-~~s~~y~~d~Na~------d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+..++++ +.++ +++++.. +..|.||+|.|+..++.+ ++++|+++ ||++|.+|.+|+||||+|+.
T Consensus 160 ~~~eIVk~Lls~--Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~e-Ive~LIs~------GADIN~kD~~G~TpLh~Aa~ 230 (437)
T PHA02795 160 KESSVVEFILNC--GIPDENDVKLDLYKIIQYTRGFLVDEPTVLE-IYKLCIPY------IEDINQLDAGGRTLLYRAIY 230 (437)
T ss_pred CcHHHHHHHHhc--CCcccccccchhhhhhccchhHHHHhcCHHH-HHHHHHhC------cCCcCcCCCCCCCHHHHHHH
Confidence 3566666 3333 3322222 245889999999986655 99999764 58999999999999999999
Q ss_pred cCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 737 RAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+|+.+++++|++++++ +. ..|.|+|+++.
T Consensus 231 ~g~~eiVelLL~~GAdIN~~d-~~G~TpLh~Aa 262 (437)
T PHA02795 231 AGYIDLVSWLLENGANVNAVM-SNGYTCLDVAV 262 (437)
T ss_pred cCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHH
Confidence 9999999999998665 44 67999999884
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-15 Score=176.16 Aligned_cols=137 Identities=23% Similarity=0.160 Sum_probs=114.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCchhhHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~-~Gadi~~dg~~~~~k~ 667 (865)
.+|||+|+++|..+.+..||..|++ ++.++.++.||||+||++|+...||-||+ +|.
T Consensus 274 ~tpLH~a~r~G~~~svd~Ll~~Ga~---------I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~------------- 331 (929)
T KOG0510|consen 274 CTPLHYAARQGGPESVDNLLGFGAS---------INSKNKDEESPLHFAAIYGRINTVERLLQESDT------------- 331 (929)
T ss_pred CchHHHHHHcCChhHHHHHHHcCCc---------ccccCCCCCCchHHHHHcccHHHHHHHHhCcCc-------------
Confidence 6999999999999999999987654 33456788999999999999999999999 541
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccc---ccCCCCCCHHHHHHHcCCHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKS---AQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VN---akD~~G~TPLHyAa~rGn~eiIe 744 (865)
+..|..|-.|.||||+||..|+ ..++++|++.| |+++ ..|.+|.||||+|++.||...|+
T Consensus 332 ----------rllne~D~~g~tpLHlaa~~gH-~~v~qlLl~~G------A~~~~~~e~D~dg~TaLH~Aa~~g~~~av~ 394 (929)
T KOG0510|consen 332 ----------RLLNESDLHGMTPLHLAAKSGH-DRVVQLLLNKG------ALFLNMSEADSDGNTALHLAAKYGNTSAVQ 394 (929)
T ss_pred ----------cccccccccCCCchhhhhhcCH-HHHHHHHHhcC------hhhhcccccccCCchhhhHHHHhccHHHHH
Confidence 3568899999999999998765 55999998865 5555 56999999999999999999999
Q ss_pred HHHHhhhhcC--CCCCceEeec
Q 002922 745 LVQRKINKKS--SESGRVILDI 764 (865)
Q Consensus 745 LL~~K~~~~~--~~~~~v~l~i 764 (865)
+|+.++++.. ..+|...+++
T Consensus 395 ~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 395 KLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred HHHHcCCceeeccccccccccc
Confidence 9999877641 1466777773
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.7e-15 Score=163.07 Aligned_cols=135 Identities=24% Similarity=0.166 Sum_probs=94.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCcc---CCCCCchH---------------------------H-hhccccHHHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVD---TGDHTSSE---------------------------L-AILEMGLLHK 636 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~---~~~~s~~~---------------------------~-~~~G~TpLH~ 636 (865)
.+++||||+.+.+++||++|||.+.= +|+ .-|+++.. + ...|.|+|++
T Consensus 268 GNTALHYsVSHaNF~VV~~LLDSgvC-~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALML 346 (452)
T KOG0514|consen 268 GNTALHYAVSHANFDVVSILLDSGVC-DVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALML 346 (452)
T ss_pred CCeeeeeeecccchHHHHHHhccCcc-cccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhh
Confidence 46999999999999999999987631 121 11222221 0 0126677777
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc
Q 002922 637 AVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI 716 (865)
Q Consensus 637 AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~ 716 (865)
||..|+.+||+.||..|| |||++|.+|-|+|+.||++|+.| ||++||..|
T Consensus 347 AVSHGr~d~vk~LLacgA------------------------dVNiQDdDGSTALMCA~EHGhkE-ivklLLA~p----- 396 (452)
T KOG0514|consen 347 AVSHGRVDMVKALLACGA------------------------DVNIQDDDGSTALMCAAEHGHKE-IVKLLLAVP----- 396 (452)
T ss_pred hhhcCcHHHHHHHHHccC------------------------CCccccCCccHHHhhhhhhChHH-HHHHHhccC-----
Confidence 777777777777777665 36777888888888888877665 888887766
Q ss_pred cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhc
Q 002922 717 EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKK 753 (865)
Q Consensus 717 gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~ 753 (865)
++|+.+.|.+|-|+|.+|-..||.+|.-+|..+.|-+
T Consensus 397 ~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~n~~ 433 (452)
T KOG0514|consen 397 SCDISLTDVDGSTALSIALEAGHREIAVMLYAHMNIK 433 (452)
T ss_pred cccceeecCCCchhhhhHHhcCchHHHHHHHHHHHhh
Confidence 4667778888888888888888888877777765543
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.5e-15 Score=173.52 Aligned_cols=162 Identities=12% Similarity=-0.032 Sum_probs=118.4
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC----HHHHHHHHhcCC--CCCC
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC----RPMVELLLNYAP--DNVL 658 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn----~eIVELLL~~Ga--di~~ 658 (865)
.+++||+|+.. |+.+++++||+.+++ + ...+..|+||||+|+.+|+ .++|++||+.+. +++.
T Consensus 32 g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~--v-------~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~ 102 (661)
T PHA02917 32 KNNALHAYLFNEHCNNVEVVKLLLDSGTN--P-------LHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND 102 (661)
T ss_pred CCcHHHHHHHhhhcCcHHHHHHHHHCCCC--c-------cccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC
Confidence 36999998665 789999999988753 2 2446779999999999998 456789987643 3322
Q ss_pred CCC----ch--hhHHHHhhhcCCcccCCcccCCCCchHHHHHH-hcCChHHHHHHhhcCCCCCCccccccccCC---CC-
Q 002922 659 DKP----GS--RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDS---TG- 727 (865)
Q Consensus 659 dg~----~~--~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA-~~~~~e~IVelLL~dp~~Ig~gA~VNakD~---~G- 727 (865)
... +. +..++|+.+. ..++++|.+|..|+||||+|+ ..++..+||++|++. ||++|.+|. .|
T Consensus 103 ~~~~~~~a~~~~~~e~vk~Ll-~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~------Ga~vn~~d~~~~~g~ 175 (661)
T PHA02917 103 FNIFSYMKSKNVDVDLIKVLV-EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN------GCSVLYEDEDDEYGY 175 (661)
T ss_pred cchHHHHHhhcCCHHHHHHHH-HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc------CCCcccccccccccc
Confidence 101 11 3566777432 227899999999999999654 333344599999875 577877654 35
Q ss_pred ----------CCHHHHHHH-----------cCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 728 ----------LTPNDYASL-----------RAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 728 ----------~TPLHyAa~-----------rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
.||||||+. +|+.+++++|++++++ +. .+|.++||++-
T Consensus 176 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d-~~G~TpLh~A~ 237 (661)
T PHA02917 176 AYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSID-KNYCTALQYYI 237 (661)
T ss_pred ccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCC-CCCCcHHHHHH
Confidence 599999986 4689999999998665 44 57889999874
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-15 Score=168.20 Aligned_cols=160 Identities=19% Similarity=0.114 Sum_probs=124.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhh-cc----CCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGIL-FD----GTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--- 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~g-a~----anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d--- 659 (865)
.++||..|+.+|+..+|++||+.- ++ +.|..++- ...|-+||..|+-.||.+||++|+++|+++|.-
T Consensus 42 g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge-----~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T 116 (615)
T KOG0508|consen 42 GGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGE-----TIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT 116 (615)
T ss_pred CCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCc-----ccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence 348999999999999999999953 22 11222211 234889999999999999999999999988731
Q ss_pred -----------CCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCC
Q 002922 660 -----------KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL 728 (865)
Q Consensus 660 -----------g~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~ 728 (865)
|+-..+|-||+- +||+++.|..|.|.|||||.+|+.+ |++.|++. |||+|+++..|.
T Consensus 117 NStPLraACfDG~leivKyLvE~-----gad~~IanrhGhTcLmIa~ykGh~~-I~qyLle~------gADvn~ks~kGN 184 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEH-----GADPEIANRHGHTCLMIACYKGHVD-IAQYLLEQ------GADVNAKSYKGN 184 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHc-----CCCCcccccCCCeeEEeeeccCchH-HHHHHHHh------CCCcchhcccCc
Confidence 111134444432 5789999999999999999998766 99999875 589999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHhhhh--cCCCCCceEeecC
Q 002922 729 TPNDYASLRAHHSYIHLVQRKINK--KSSESGRVILDIP 765 (865)
Q Consensus 729 TPLHyAa~rGn~eiIeLL~~K~~~--~~~~~~~v~l~i~ 765 (865)
|+||.++..||.+++++|+++.++ ++ +.|-++|-.+
T Consensus 185 TALH~caEsG~vdivq~Ll~~ga~i~~d-~~GmtPL~~A 222 (615)
T KOG0508|consen 185 TALHDCAESGSVDIVQLLLKHGAKIDVD-GHGMTPLLLA 222 (615)
T ss_pred hHHHhhhhcccHHHHHHHHhCCceeeec-CCCCchHHHH
Confidence 999999999999999999997554 34 3455555444
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.4e-15 Score=173.23 Aligned_cols=154 Identities=19% Similarity=0.140 Sum_probs=121.9
Q ss_pred ecccccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCC------chHHhhccccHHHHHHHcCCHHHHHHHHhcCCCC
Q 002922 583 FPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHT------SSELAILEMGLLHKAVRRNCRPMVELLLNYAPDN 656 (865)
Q Consensus 583 fqi~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s------~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi 656 (865)
|-..-..++||.|++.|..+.+|.+|+++....-...+.- .++.|.+|.||||+|+++|+.++|+.||.+|++
T Consensus 220 ~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~- 298 (929)
T KOG0510|consen 220 FDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS- 298 (929)
T ss_pred cccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-
Confidence 4444556999999999999999999999865321110000 012355699999999999999999999999975
Q ss_pred CCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 657 VLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 657 ~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+|.++.++.||||.||.+|+.. .|+-||+.+ -....|..|..|.||||.|+.
T Consensus 299 -----------------------I~~kn~d~~spLH~AA~yg~~n-tv~rLL~~~----~~rllne~D~~g~tpLHlaa~ 350 (929)
T KOG0510|consen 299 -----------------------INSKNKDEESPLHFAAIYGRIN-TVERLLQES----DTRLLNESDLHGMTPLHLAAK 350 (929)
T ss_pred -----------------------ccccCCCCCCchHHHHHcccHH-HHHHHHhCc----CccccccccccCCCchhhhhh
Confidence 4677889999999999998877 788887622 136679999999999999999
Q ss_pred cCCHHHHHHHHHhhhhcC-----CCCCceEeecC
Q 002922 737 RAHHSYIHLVQRKINKKS-----SESGRVILDIP 765 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~~~-----~~~~~v~l~i~ 765 (865)
.||..++++|+++++... ...|.|+||.+
T Consensus 351 ~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~A 384 (929)
T KOG0510|consen 351 SGHDRVVQLLLNKGALFLNMSEADSDGNTALHLA 384 (929)
T ss_pred cCHHHHHHHHHhcChhhhcccccccCCchhhhHH
Confidence 999999999999866433 14578888887
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.4e-15 Score=145.50 Aligned_cols=115 Identities=18% Similarity=0.194 Sum_probs=89.7
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh---HHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA---ENV 703 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~---e~I 703 (865)
+..|.|+||+|++.|+.++|++|+.+... ..+++++|.+|..|+||||+|+..++. .++
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~------------------~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~i 79 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRG------------------DCHAAALNATDDAGQMCIHIAAEKHEAQLAAEI 79 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhcc------------------chhhhhhhccCCCCCcHHHHHHHcCChHHHHHH
Confidence 55799999999999999999999764210 011346789999999999999998774 348
Q ss_pred HHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHHHHh-hhh---cCCCCCceEeecCC
Q 002922 704 LDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLVQRK-INK---KSSESGRVILDIPG 766 (865)
Q Consensus 704 VelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa~rGn~eiIeLL~~K-~~~---~~~~~~~v~l~i~~ 766 (865)
+++|++. +|++|.+|. +|+||||+|+++++.+++++|+.+ ..+ +. ..|.++|+++.
T Consensus 80 i~~Ll~~------gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n-~~g~tpL~~A~ 140 (169)
T PHA02741 80 IDHLIEL------GADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCN-ADNKSPFELAI 140 (169)
T ss_pred HHHHHHc------CCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCC-CCCCCHHHHHH
Confidence 9999764 588999995 999999999999999999999863 333 23 35666666643
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=172.51 Aligned_cols=132 Identities=14% Similarity=0.125 Sum_probs=95.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHH--HcCCHHHHHHHHhcCCCCCC-CCCchhhH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAV--RRNCRPMVELLLNYAPDNVL-DKPGSRQK 666 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV--~~gn~eIVELLL~~Gadi~~-dg~~~~~k 666 (865)
.++++|+++|+.++||+||+.|++.+ .++..|+||||.|+ ..|+.+||++||++|++++. +..
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin---------~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~----- 170 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLS---------VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDED----- 170 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCC---------ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccc-----
Confidence 56677888888888888888775433 33667889998654 46789999999999887642 100
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHh-----------cCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAAC-----------RDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~-----------~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
...+|.+ .+.....+.||||+|+. +++ .++|++|++. |||+|.+|.+|+||||||+
T Consensus 171 -----~~~g~~~-~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~-~eiv~~Li~~------Gadvn~~d~~G~TpLh~A~ 237 (661)
T PHA02917 171 -----DEYGYAY-DDYQPRNCGTVLHLYIISHLYSESDTRAYVR-PEVVKCLINH------GIKPSSIDKNYCTALQYYI 237 (661)
T ss_pred -----ccccccc-ccccccccccHHHHHHhhcccccccccccCc-HHHHHHHHHC------CCCcccCCCCCCcHHHHHH
Confidence 0011111 12334566899999986 233 4599999764 6899999999999999999
Q ss_pred HcCCH--HHHHHHHH
Q 002922 736 LRAHH--SYIHLVQR 748 (865)
Q Consensus 736 ~rGn~--eiIeLL~~ 748 (865)
.+|+. +++++|++
T Consensus 238 ~~g~~~~eivk~Li~ 252 (661)
T PHA02917 238 KSSHIDIDIVKLLMK 252 (661)
T ss_pred HcCCCcHHHHHHHHh
Confidence 99985 79999975
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-14 Score=170.41 Aligned_cols=146 Identities=12% Similarity=-0.011 Sum_probs=105.8
Q ss_pred HHHHHHHCC---CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC----HHHHHHHHhcCCC--CCC---
Q 002922 591 LLEFSMEHD---WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC----RPMVELLLNYAPD--NVL--- 658 (865)
Q Consensus 591 LL~fAverg---~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn----~eIVELLL~~Gad--i~~--- 658 (865)
+|+.=.+.+ ..++|++||+.|++.+. +..|.||||+|+..++ .++|++||++|++ ++.
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~GAdIN~----------k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~ 415 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDNGATMDK----------TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSN 415 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHCCCCCCc----------CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccccccc
Confidence 777666655 58999999999865332 2468999999999885 8999999999974 442
Q ss_pred CCCchhh-------------------HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccc
Q 002922 659 DKPGSRQ-------------------KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW 719 (865)
Q Consensus 659 dg~~~~~-------------------k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~ 719 (865)
+|..+-. ..+++.+. .+++++|++|..|+||||+||..++.+ ++++|++ +||+
T Consensus 416 ~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LI-s~GADINakD~~G~TPLh~Aa~~~~~e-ive~LI~------~GAd 487 (672)
T PHA02730 416 NGRLCMYGLILSRFNNCGYHCYETILIDVFDILS-KYMDDIDMIDNENKTLLYYAVDVNNIQ-FARRLLE------YGAS 487 (672)
T ss_pred CCCchHhHHHHHHhccccccccchhHHHHHHHHH-hcccchhccCCCCCCHHHHHHHhCCHH-HHHHHHH------CCCC
Confidence 2322111 11244222 247888888888888888888887655 8888865 3577
Q ss_pred ccccCC-CCCCHHHHHHHc--CCHHHHHHHHHhhhhcC
Q 002922 720 KSAQDS-TGLTPNDYASLR--AHHSYIHLVQRKINKKS 754 (865)
Q Consensus 720 VNakD~-~G~TPLHyAa~r--Gn~eiIeLL~~K~~~~~ 754 (865)
+|++|. .|.||||+|+.+ |+.+++++|+++.++..
T Consensus 488 IN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 488 VNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred CCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 888886 588888888874 67888888888776655
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-14 Score=169.84 Aligned_cols=116 Identities=13% Similarity=0.046 Sum_probs=84.2
Q ss_pred cchHHHHHHHCCC----HHHHHHHHHhhccCCccCCCCCchHHhhccccHHHH---HHHcC---------CHHHHHHHHh
Q 002922 588 FKWLLEFSMEHDW----CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHK---AVRRN---------CRPMVELLLN 651 (865)
Q Consensus 588 ~~tLL~fAverg~----~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~---AV~~g---------n~eIVELLL~ 651 (865)
.++|||+|+..+. .+++++||+.|++.+++ .++..|.||||. |...+ ..+++++||+
T Consensus 378 G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN-------~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs 450 (672)
T PHA02730 378 NNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN-------HVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK 450 (672)
T ss_pred CCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc-------ccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh
Confidence 4699999988774 79999999987654443 446679999994 44332 2357999999
Q ss_pred cCCCCCC-C--CCch-------hhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcC-ChHHHHHHhhcCC
Q 002922 652 YAPDNVL-D--KPGS-------RQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRD-DAENVLDALTDDP 711 (865)
Q Consensus 652 ~Gadi~~-d--g~~~-------~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~-~~e~IVelLL~dp 711 (865)
+|+++++ + |..+ +..++++.+- .+++++|+++. .|.||||+|+..+ +..+++++|++.+
T Consensus 451 ~GADINakD~~G~TPLh~Aa~~~~~eive~LI-~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~g 521 (672)
T PHA02730 451 YMDDIDMIDNENKTLLYYAVDVNNIQFARRLL-EYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYH 521 (672)
T ss_pred cccchhccCCCCCCHHHHHHHhCCHHHHHHHH-HCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcC
Confidence 9999884 2 3333 3455666432 34789999997 5999999999852 3345999998754
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.8e-15 Score=178.92 Aligned_cols=139 Identities=27% Similarity=0.247 Sum_probs=111.0
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
++||.|.+.+...+++.+++.+++ ++ ..+..|.||||.||.+|+..+|++||++|+|
T Consensus 509 ~~lhla~~~~~v~~~~~l~~~ga~--v~-------~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd-------------- 565 (1143)
T KOG4177|consen 509 TPLHLAADEDTVKVAKILLEHGAN--VD-------LRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD-------------- 565 (1143)
T ss_pred chhhhhhhhhhHHHHHHHhhcCCc--ee-------hhcccccchHHHHHhcCCchHHHHhhhCCcc--------------
Confidence 566666666666666666665532 21 2345688999999999999999999999875
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
++++++.|+||||.||.+|+.+ ++++|++.| |++|+.|.+|.||||+|+..|+++++++|...
T Consensus 566 ----------v~ak~~~G~TPLH~Aa~~G~~~-i~~LLlk~G------A~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~ 628 (1143)
T KOG4177|consen 566 ----------VNAKDKLGYTPLHQAAQQGHND-IAELLLKHG------ASVNAADLDGFTPLHIAVRLGYLSVVKLLKVV 628 (1143)
T ss_pred ----------ccccCCCCCChhhHHHHcChHH-HHHHHHHcC------CCCCcccccCcchhHHHHHhcccchhhHHHhc
Confidence 5788999999999999998666 999998864 88899999999999999999999999998875
Q ss_pred hhh--------cCCCCCceEeecCCCcc
Q 002922 750 INK--------KSSESGRVILDIPGSIV 769 (865)
Q Consensus 750 ~~~--------~~~~~~~v~l~i~~~~~ 769 (865)
..+ +. .+|+|..+++....
T Consensus 629 ~~~~~~~~~~~e~-~~g~~p~~v~e~~~ 655 (1143)
T KOG4177|consen 629 TATPAATDPVKEN-RKGAVPEDVAEELD 655 (1143)
T ss_pred cCccccccchhhh-hcccChhhHHHHhh
Confidence 443 22 47788887776543
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-14 Score=124.88 Aligned_cols=86 Identities=27% Similarity=0.330 Sum_probs=74.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCC
Q 002922 634 LHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGS 713 (865)
Q Consensus 634 LH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~ 713 (865)
||+||++|+.+++++|++.+++ ++. |.||||+|+.+++.+ ++++|++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~------------------------~~~----~~~~l~~A~~~~~~~-~~~~Ll~~--- 48 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD------------------------INL----GNTALHYAAENGNLE-IVKLLLEN--- 48 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST------------------------TTS----SSBHHHHHHHTTTHH-HHHHHHHT---
T ss_pred CHHHHHcCCHHHHHHHHHCcCC------------------------CCC----CCCHHHHHHHcCCHH-HHHHHHHh---
Confidence 8999999999999999998754 233 899999999998766 99999875
Q ss_pred CCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 714 VGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 714 Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
++++|.+|.+|+||||+|+.+|+.+++++|+++..+..
T Consensus 49 ---g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 49 ---GADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp ---TTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred ---cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47889999999999999999999999999999866544
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.5e-15 Score=161.31 Aligned_cols=129 Identities=22% Similarity=0.183 Sum_probs=101.9
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC-C--CCc------------hhhHHHHhhhcCCcccCCcccC-CCCch
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL-D--KPG------------SRQKQLVDRAGSGFIFKPNVIG-PAGLT 689 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~-d--g~~------------~~~k~LV~~~s~~y~~d~Na~d-~~G~T 689 (865)
|.+|+|+|||||...|.++|.+||..|. +++. + |.. ..++.+|+.+++ .-|||++- ..|.|
T Consensus 265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~--mgnVNaKAsQ~gQT 342 (452)
T KOG0514|consen 265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFK--MGDVNAKASQHGQT 342 (452)
T ss_pred cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHh--ccCcchhhhhhcch
Confidence 5679999999999999999999999885 3332 2 221 246667775543 23789885 57999
Q ss_pred HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh------hhhcCCCCCceEee
Q 002922 690 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK------INKKSSESGRVILD 763 (865)
Q Consensus 690 PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K------~~~~~~~~~~v~l~ 763 (865)
+|++|+.+|..+ +|+.||. +|||||.+|++|-|+|++|+.+||++|++||+.. +.|.+ |.|.|.
T Consensus 343 ALMLAVSHGr~d-~vk~LLa------cgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D---gSTAl~ 412 (452)
T KOG0514|consen 343 ALMLAVSHGRVD-MVKALLA------CGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD---GSTALS 412 (452)
T ss_pred hhhhhhhcCcHH-HHHHHHH------ccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC---Cchhhh
Confidence 999999998765 9999976 5799999999999999999999999999999864 34444 667777
Q ss_pred cCCC
Q 002922 764 IPGS 767 (865)
Q Consensus 764 i~~~ 767 (865)
|+=+
T Consensus 413 IAle 416 (452)
T KOG0514|consen 413 IALE 416 (452)
T ss_pred hHHh
Confidence 7533
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.8e-14 Score=123.75 Aligned_cols=89 Identities=25% Similarity=0.260 Sum_probs=74.1
Q ss_pred HHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhh
Q 002922 592 LEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDR 671 (865)
Q Consensus 592 L~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~ 671 (865)
||+|+.+|..++++.|++.+. +++ . |.||||+|+.+|+.+|+++|+++|++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~--~~~----------~-~~~~l~~A~~~~~~~~~~~Ll~~g~~---------------- 51 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGA--DIN----------L-GNTALHYAAENGNLEIVKLLLENGAD---------------- 51 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTS--TTT----------S-SSBHHHHHHHTTTHHHHHHHHHTTTC----------------
T ss_pred CHHHHHcCCHHHHHHHHHCcC--CCC----------C-CCCHHHHHHHcCCHHHHHHHHHhccc----------------
Confidence 799999999999999998652 221 1 78999999999999999999999864
Q ss_pred hcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC
Q 002922 672 AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD 724 (865)
Q Consensus 672 ~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD 724 (865)
+|.+|..|+||||+|+.+++.+ ++++|++. |+++|.+|
T Consensus 52 --------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~n 89 (89)
T PF12796_consen 52 --------INSQDKNGNTALHYAAENGNLE-IVKLLLEH------GADVNIRN 89 (89)
T ss_dssp --------TT-BSTTSSBHHHHHHHTTHHH-HHHHHHHT------TT-TTSS-
T ss_pred --------ccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcC
Confidence 6778899999999999997665 99999875 47778876
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-14 Score=173.01 Aligned_cols=162 Identities=21% Similarity=0.197 Sum_probs=127.8
Q ss_pred chHHHHHHHCC-CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC---CCch-
Q 002922 589 KWLLEFSMEHD-WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD---KPGS- 663 (865)
Q Consensus 589 ~tLL~fAverg-~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d---g~~~- 663 (865)
.+++|+|+..| ..+++..++..+.+ ++.....|.||||.|+..|+.+++.+|++.+++.+.+ +...
T Consensus 441 ~T~lhvaa~~g~~~~~~~~l~~~g~~---------~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~l 511 (1143)
T KOG4177|consen 441 YTPLHVAAKKGRYLQIARLLLQYGAD---------PNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPL 511 (1143)
T ss_pred CChhhhhhhcccHhhhhhhHhhcCCC---------cchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchh
Confidence 48999999999 77888888877643 3344567999999999999999999999988655432 1110
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
..+....+..+ ++++|.++..|.||||.|+.+++.. +|++|+++ +||+|++|+.|+||||.|+.
T Consensus 512 hla~~~~~v~~~~~l~~~--ga~v~~~~~r~~TpLh~A~~~g~v~-~VkfLLe~------gAdv~ak~~~G~TPLH~Aa~ 582 (1143)
T KOG4177|consen 512 HLAADEDTVKVAKILLEH--GANVDLRTGRGYTPLHVAVHYGNVD-LVKFLLEH------GADVNAKDKLGYTPLHQAAQ 582 (1143)
T ss_pred hhhhhhhhHHHHHHHhhc--CCceehhcccccchHHHHHhcCCch-HHHHhhhC------CccccccCCCCCChhhHHHH
Confidence 11111112111 5688999999999999999998877 99999875 58999999999999999999
Q ss_pred cCCHHHHHHHHHhhhh---cCCCCCceEeecCCCcc
Q 002922 737 RAHHSYIHLVQRKINK---KSSESGRVILDIPGSIV 769 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~~~ 769 (865)
.|+.++++||.++.++ .+ .++.|.|+|+....
T Consensus 583 ~G~~~i~~LLlk~GA~vna~d-~~g~TpL~iA~~lg 617 (1143)
T KOG4177|consen 583 QGHNDIAELLLKHGASVNAAD-LDGFTPLHIAVRLG 617 (1143)
T ss_pred cChHHHHHHHHHcCCCCCccc-ccCcchhHHHHHhc
Confidence 9999999999998553 44 68999999986544
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=119.76 Aligned_cols=121 Identities=28% Similarity=0.253 Sum_probs=102.9
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
+..++||+|+..++.++++.|++.+... ...+..|.||||.|+..++.+++++|+++|++
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~---------~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~----------- 65 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADV---------NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD----------- 65 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCC---------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 3469999999999999999999887432 23356789999999999999999999999853
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
++..+..|.||+|+|+..++.+ ++++|++.+ .+++..|..|.||+|+|...++.+++++|
T Consensus 66 -------------~~~~~~~~~~~l~~a~~~~~~~-~~~~L~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 66 -------------VNARDKDGNTPLHLAARNGNLD-VVKLLLKHG------ADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred -------------ccccCCCCCCHHHHHHHcCcHH-HHHHHHHcC------CCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 4566778999999999998766 999998754 55788999999999999999999999877
Q ss_pred H
Q 002922 747 Q 747 (865)
Q Consensus 747 ~ 747 (865)
+
T Consensus 126 l 126 (126)
T cd00204 126 L 126 (126)
T ss_pred C
Confidence 3
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.7e-14 Score=138.40 Aligned_cols=114 Identities=15% Similarity=0.034 Sum_probs=89.7
Q ss_pred chHHhhccccHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcC
Q 002922 623 SSELAILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRD 698 (865)
Q Consensus 623 ~~~~~~~G~TpLH~AV~~gn~----eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~ 698 (865)
+...+..+.++||+|++.|+. +++++|+++|++ +|.+|..|+||||+||.++
T Consensus 13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~------------------------~~~~d~~g~t~Lh~Aa~~g 68 (166)
T PHA02743 13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL------------------------LHRYDHHGRQCTHMVAWYD 68 (166)
T ss_pred HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh------------------------hhccCCCCCcHHHHHHHhC
Confidence 334456688999999999998 677788888753 5778999999999999987
Q ss_pred ChHH--HHHHhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHH-hhhh---cCCCCCceEeecCCC
Q 002922 699 DAEN--VLDALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQR-KINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 699 ~~e~--IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~-K~~~---~~~~~~~v~l~i~~~ 767 (865)
..+. ++++|++. ||++|.+| ..|+||||+|+.+|+.+++++|.. +..+ +. ..|.++|+++..
T Consensus 69 ~~~~~~~i~~Ll~~------Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~tpL~~A~~ 137 (166)
T PHA02743 69 RANAVMKIELLVNM------GADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN-YQHETAYHIAYK 137 (166)
T ss_pred ccCHHHHHHHHHHc------CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC-CCCCCHHHHHHH
Confidence 6442 47889764 58899999 589999999999999999999985 4333 33 467788877643
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-13 Score=164.65 Aligned_cols=121 Identities=21% Similarity=0.203 Sum_probs=86.5
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.|.||||+|+.+|+.++|++||++|++++...... .... . +-......|.||||+|+..++.+ ++++|+
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~-------~~~~--~-~~~~~~~~g~tpL~~Aa~~~~~~-iv~lLl 195 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGD-------FFVK--S-QGVDSFYHGESPLNAAACLGSPS-IVALLS 195 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCc-------hhhc--C-CCCCcccccccHHHHHHHhCCHH-HHHHHh
Confidence 48999999999999999999999999876311000 0000 0 00012246999999999997765 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcC-----CH----HHHHHHHHhhhh----------cCCCCCceEeecCCC
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRA-----HH----SYIHLVQRKINK----------KSSESGRVILDIPGS 767 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG-----n~----eiIeLL~~K~~~----------~~~~~~~v~l~i~~~ 767 (865)
++| ||+|++|..|+||||+|+..+ +. .+.+++...+++ ++ .+|.++|+++..
T Consensus 196 ~~g------adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N-~~g~TPL~~A~~ 266 (743)
T TIGR00870 196 EDP------ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN-HQGLTPLKLAAK 266 (743)
T ss_pred cCC------cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC-CCCCCchhhhhh
Confidence 875 788999999999999999987 22 233444444332 23 578888888754
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-14 Score=138.27 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=85.1
Q ss_pred HHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChH--H
Q 002922 625 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE--N 702 (865)
Q Consensus 625 ~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e--~ 702 (865)
..+..|.||||+|++.|+ ++++|+..+.....+ ...++.+|..|+||||+||..++.+ +
T Consensus 12 ~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~-----------------~~~~~~~d~~g~t~Lh~a~~~~~~~~~e 72 (154)
T PHA02736 12 EPDIEGENILHYLCRNGG--VTDLLAFKNAISDEN-----------------RYLVLEYNRHGKQCVHIVSNPDKADPQE 72 (154)
T ss_pred hcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchh-----------------HHHHHHhcCCCCEEEEeecccCchhHHH
Confidence 345679999999999998 566666554221100 1123567889999999999987643 3
Q ss_pred HHHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHHHHh-hhh---cCCCCCceEeecCC
Q 002922 703 VLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLVQRK-INK---KSSESGRVILDIPG 766 (865)
Q Consensus 703 IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa~rGn~eiIeLL~~K-~~~---~~~~~~~v~l~i~~ 766 (865)
++++|++. |+++|.+|. +|+||||+|+..|+.+++++|+.+ ..+ +. ..|.++|+++.
T Consensus 73 ~v~~Ll~~------gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~-~~g~tpL~~A~ 134 (154)
T PHA02736 73 KLKLLMEW------GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILN-YAFKTPYYVAC 134 (154)
T ss_pred HHHHHHHc------CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcccc-CCCCCHHHHHH
Confidence 68888764 588999985 999999999999999999999864 332 33 46777777764
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.3e-13 Score=129.37 Aligned_cols=126 Identities=25% Similarity=0.173 Sum_probs=108.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC-----HHHHHHHHhcCCCCCCCCCc
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC-----RPMVELLLNYAPDNVLDKPG 662 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn-----~eIVELLL~~Gadi~~dg~~ 662 (865)
...++++++..+..+++++|++.+++. ...+..|.||||+|+..++ .+++++||++|++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~------ 137 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADV---------NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADL------ 137 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCc---------ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCC------
Confidence 568999999999999999999887543 3447789999999999999 99999999999720
Q ss_pred hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHH
Q 002922 663 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742 (865)
Q Consensus 663 ~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ei 742 (865)
.+.+.+|..|+||||+|+..++.+ ++++|++. +++++.+|..|.|++|+|+..++.++
T Consensus 138 ---------------~~~~~~~~~g~tpl~~A~~~~~~~-~~~~ll~~------~~~~~~~~~~g~t~l~~a~~~~~~~~ 195 (235)
T COG0666 138 ---------------DVNNLRDEDGNTPLHWAALNGDAD-IVELLLEA------GADPNSRNSYGVTALDPAAKNGRIEL 195 (235)
T ss_pred ---------------CCccccCCCCCchhHHHHHcCchH-HHHHHHhc------CCCCcccccCCCcchhhhcccchHHH
Confidence 024667999999999999998765 99999774 57889999999999999999999999
Q ss_pred HHHHHHhh
Q 002922 743 IHLVQRKI 750 (865)
Q Consensus 743 IeLL~~K~ 750 (865)
++.+.++.
T Consensus 196 ~~~l~~~~ 203 (235)
T COG0666 196 VKLLLDKG 203 (235)
T ss_pred HHHHHhcC
Confidence 99999874
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.7e-14 Score=147.39 Aligned_cols=117 Identities=22% Similarity=0.220 Sum_probs=96.2
Q ss_pred CCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh
Q 002922 621 HTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA 700 (865)
Q Consensus 621 ~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~ 700 (865)
++-+..|..|.+|||+|++.|+..+||.||..|+ ++|+.+.+.-||||+||.+|+.
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rga------------------------rvn~tnmgddtplhlaaahghr 80 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGA------------------------RVNSTNMGDDTPLHLAAAHGHR 80 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhccc------------------------ccccccCCCCcchhhhhhcccH
Confidence 3444446679999999999999999999999986 4688899999999999999765
Q ss_pred HHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh--cCCCCCceEeecCCCc
Q 002922 701 ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK--KSSESGRVILDIPGSI 768 (865)
Q Consensus 701 e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~--~~~~~~~v~l~i~~~~ 768 (865)
+ ||..|++. .||||+.+..|.|||||||.-|...++|=|+..++. ...-+|++.|+.+..+
T Consensus 81 d-ivqkll~~------kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 81 D-IVQKLLSR------KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred H-HHHHHHHH------hcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchH
Confidence 4 89888764 488999999999999999999999999988876432 1113688998887553
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-13 Score=158.90 Aligned_cols=143 Identities=11% Similarity=0.007 Sum_probs=108.3
Q ss_pred HHH-HHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHH-cCCHHHHHHHHhcCCCCCC---CCCchhh
Q 002922 591 LLE-FSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR-RNCRPMVELLLNYAPDNVL---DKPGSRQ 665 (865)
Q Consensus 591 LL~-fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~-~gn~eIVELLL~~Gadi~~---dg~~~~~ 665 (865)
++| .|..+|..++||+|++.|++ ++ .++..+.||||+|+. .++.|||++||++|||+.+ .|.++..
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GAd--vN-------~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~ 144 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGLE--IN-------SIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIII 144 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCCC--cc-------cccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhh
Confidence 444 45678899999999998764 32 235568899999976 6999999999999998653 2322211
Q ss_pred HHHHh---------hhcCCcccCCcccCCCCchHHHHHHhcCC------hHHHHHHhhcCCCCCCccccccccCCCCCCH
Q 002922 666 KQLVD---------RAGSGFIFKPNVIGPAGLTPLHVAACRDD------AENVLDALTDDPGSVGIEAWKSAQDSTGLTP 730 (865)
Q Consensus 666 k~LV~---------~~s~~y~~d~Na~d~~G~TPLHlAA~~~~------~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP 730 (865)
+++.. ....-|++.+|.+|..|.||||+|+.++. ..+|+++|+++ ||++|.+|..|.||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~------g~~~~~~d~~g~t~ 218 (631)
T PHA02792 145 EQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISH------EKEMRYYTYREHTT 218 (631)
T ss_pred hhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhC------CCCcCccCCCCChH
Confidence 11111 01123456688999999999999999861 34599999765 58889999999999
Q ss_pred HHHHHHcC--CHHHHHHHHH
Q 002922 731 NDYASLRA--HHSYIHLVQR 748 (865)
Q Consensus 731 LHyAa~rG--n~eiIeLL~~ 748 (865)
||||+.+. ..+++++|+.
T Consensus 219 l~~~~~~~~i~~ei~~~L~~ 238 (631)
T PHA02792 219 LYYYVDKCDIKREIFDALFD 238 (631)
T ss_pred HHHHHHcccchHHHHHHHHh
Confidence 99999999 7899999886
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-13 Score=139.64 Aligned_cols=143 Identities=20% Similarity=0.123 Sum_probs=112.0
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc-------
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG------- 662 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~------- 662 (865)
.++.+|+...+.+++-.|.++..+ .-|..|.|||.+|+.+|++++|+|||++|++...-|..
T Consensus 131 s~~slsVhql~L~~~~~~~~n~VN-----------~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsL 199 (296)
T KOG0502|consen 131 SPLSLSVHQLHLDVVDLLVNNKVN-----------ACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSL 199 (296)
T ss_pred ChhhHHHHHHHHHHHHHHhhcccc-----------CccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhH
Confidence 688889988888877777665432 23677999999999999999999999999886642221
Q ss_pred ---hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002922 663 ---SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739 (865)
Q Consensus 663 ---~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn 739 (865)
-++.++|+++... ..|+|.-|.+|-|||-||+.-++.+ +++.|++. |||++.-|+.|+++++.|+.-|+
T Consensus 200 At~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrgnhvk-cve~Ll~s------GAd~t~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 200 ATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRGNHVK-CVESLLNS------GADVTQEDDSGYWIMDLAVALGY 271 (296)
T ss_pred HhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecCChHH-HHHHHHhc------CCCcccccccCCcHHHHHHHhhh
Confidence 1577777754322 5689999999999999999876555 99999875 58899999999999999999998
Q ss_pred HHHHHHHHHhhhh
Q 002922 740 HSYIHLVQRKINK 752 (865)
Q Consensus 740 ~eiIeLL~~K~~~ 752 (865)
. +|+.++.|-..
T Consensus 272 r-~Vqqvie~h~l 283 (296)
T KOG0502|consen 272 R-IVQQVIEKHAL 283 (296)
T ss_pred H-HHHHHHHHHHH
Confidence 8 66666665443
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-13 Score=160.94 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=106.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC-CCc----
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD-KPG---- 662 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d-g~~---- 662 (865)
.+++||+|+.+|+.+++++||+.+++.+ ..|..|+||||.|+..|+.+++++|+++++..+.. +..
T Consensus 558 G~TpLh~Aa~~g~~~~v~~Ll~~gadin---------~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~ 628 (823)
T PLN03192 558 GRTPLHIAASKGYEDCVLVLLKHACNVH---------IRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCT 628 (823)
T ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCCC---------CcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHH
Confidence 5699999999999999999999875432 33667999999999999999999999988654421 111
Q ss_pred ---hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCC-CCHHHHHHHcC
Q 002922 663 ---SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTG-LTPNDYASLRA 738 (865)
Q Consensus 663 ---~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G-~TPLHyAa~rG 738 (865)
.+...+++.+. .+++++|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..| .||++++....
T Consensus 629 Aa~~g~~~~v~~Ll-~~Gadin~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~------GAdv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 629 AAKRNDLTAMKELL-KQGLNVDSEDHQGATALQVAMAEDHVD-MVRLLIMN------GADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred HHHhCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCcHH-HHHHHHHc------CCCCCCCCCCCCCCHHHHHHHHH
Confidence 13344444322 236799999999999999999998776 99999875 58899999998 99998886543
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-13 Score=152.07 Aligned_cols=118 Identities=19% Similarity=0.135 Sum_probs=83.1
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
+||.-||.-|+.++||+|++.+++.+| .+..|.|-||+|+++|+.+|+++|++.|
T Consensus 119 tPLraACfDG~leivKyLvE~gad~~I---------anrhGhTcLmIa~ykGh~~I~qyLle~g---------------- 173 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGADPEI---------ANRHGHTCLMIACYKGHVDIAQYLLEQG---------------- 173 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCCCcc---------cccCCCeeEEeeeccCchHHHHHHHHhC----------------
Confidence 555555555555555555555443322 1334555555555555555555555555
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|+|.++.-|.|+||.+|+.|+.+ |+++|+.++ |-+ .+|..|.|||-.|+..|+.++++.|++
T Consensus 174 --------ADvn~ks~kGNTALH~caEsG~vd-ivq~Ll~~g------a~i-~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 174 --------ADVNAKSYKGNTALHDCAESGSVD-IVQLLLKHG------AKI-DVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred --------CCcchhcccCchHHHhhhhcccHH-HHHHHHhCC------cee-eecCCCCchHHHHhhhcchHHHHHHhc
Confidence 468899999999999999998776 999998765 322 368889999999999999999998883
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.1e-13 Score=145.93 Aligned_cols=110 Identities=11% Similarity=0.099 Sum_probs=90.1
Q ss_pred Hhhccc-cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCccc----CCCCchHHHHHHhcCCh
Q 002922 626 LAILEM-GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVI----GPAGLTPLHVAACRDDA 700 (865)
Q Consensus 626 ~~~~G~-TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~----d~~G~TPLHlAA~~~~~ 700 (865)
+|..|+ ++||.|++.|+.++|++||++|+++ |.+ +..|.||||+||..++.
T Consensus 28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi------------------------N~~~~~sd~~g~TpLh~Aa~~~~~ 83 (300)
T PHA02884 28 KNKICIANILYSSIKFHYTDIIDAILKLGADP------------------------EAPFPLSENSKTNPLIYAIDCDND 83 (300)
T ss_pred cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc------------------------cccCcccCCCCCCHHHHHHHcCCH
Confidence 344554 6788888889999999999999864 443 56899999999999876
Q ss_pred HHHHHHhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceEeecCC
Q 002922 701 ENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIPG 766 (865)
Q Consensus 701 e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~~ 766 (865)
+ ++++|++. ||++|+++ ..|.||||+|+..|+.+++++|..+.++.. ...|.++|+++.
T Consensus 84 e-ivklLL~~------GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~ 145 (300)
T PHA02884 84 D-AAKLLIRY------GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL 145 (300)
T ss_pred H-HHHHHHHc------CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 6 99999774 58899975 579999999999999999999999877532 146888888774
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.1e-13 Score=154.70 Aligned_cols=145 Identities=14% Similarity=0.015 Sum_probs=108.2
Q ss_pred HHhHHHHHHHhhhhhhccccccccCCCCCCcceecccccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhc
Q 002922 550 KNQALDFLHEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAIL 629 (865)
Q Consensus 550 R~~A~~fL~eLGWLLq~s~~~~~l~~~~~~vd~fqi~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~ 629 (865)
+-++.+||.+-|.-+-+. . ....++.|+.+|..++|++|++.|++.+ .++..
T Consensus 320 ~ieiIK~LId~Ga~~~r~------~-------------~~n~~~~Aa~~gn~eIVelLIs~GADIN---------~kD~~ 371 (631)
T PHA02792 320 YINVIKCMIDEGATLYRF------K-------------HINKYFQKFDNRDPKVVEYILKNGNVVV---------EDDDN 371 (631)
T ss_pred cHHHHHHHHHCCCccccC------C-------------cchHHHHHHHcCCHHHHHHHHHcCCchh---------hhcCC
Confidence 346788888887432110 0 1134778999999999999999885432 23433
Q ss_pred --cccHHHHHHHcCCHH---HHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHH
Q 002922 630 --EMGLLHKAVRRNCRP---MVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL 704 (865)
Q Consensus 630 --G~TpLH~AV~~gn~e---IVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IV 704 (865)
+.||||.|...+..+ ++++||++|+| +|.+|..|+||||+|+..++.+ ++
T Consensus 372 g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD------------------------IN~kD~~G~TPLh~Aa~~~n~e-iv 426 (631)
T PHA02792 372 IINIMPLFPTLSIHESDVLSILKLCKPYIDD------------------------INKIDKHGRSILYYCIESHSVS-LV 426 (631)
T ss_pred CCChhHHHHHHHhccHhHHHHHHHHHhcCCc------------------------cccccccCcchHHHHHHcCCHH-HH
Confidence 569999988877654 58889999864 6889999999999999987766 99
Q ss_pred HHhhcCCCCCCccccccccCCCCCCHHHHHHH---cCC-------HHHHHHHHHhhhhc
Q 002922 705 DALTDDPGSVGIEAWKSAQDSTGLTPNDYASL---RAH-------HSYIHLVQRKINKK 753 (865)
Q Consensus 705 elLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~---rGn-------~eiIeLL~~K~~~~ 753 (865)
++|++. ||++|++|..|.||||+|+. +++ .+++++|++++.+.
T Consensus 427 elLLs~------GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 427 EWLIDN------GADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred HHHHHC------CCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 999764 58899999999999999986 333 44566666665443
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.5e-13 Score=159.26 Aligned_cols=136 Identities=15% Similarity=0.017 Sum_probs=102.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCch-----HHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSS-----ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKP 661 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~-----~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~ 661 (865)
+..+|||+|+.+|+.+++++||+.+++.+....+..-. .....|.||||.|+..|+.+++++|+++|+|
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad------ 200 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD------ 200 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc------
Confidence 45699999999999999999999987654321110000 0123488999999999999999999999864
Q ss_pred chhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC--------hHHHHHHhhcCCCCCCccccc----cccCCCCCC
Q 002922 662 GSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD--------AENVLDALTDDPGSVGIEAWK----SAQDSTGLT 729 (865)
Q Consensus 662 ~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~--------~e~IVelLL~dp~~Ig~gA~V----NakD~~G~T 729 (865)
+|.+|..|+||||+|+..+. ...+.+++++.+. ...+. +.+|.+|.|
T Consensus 201 ------------------in~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~---~~~~~~el~~i~N~~g~T 259 (743)
T TIGR00870 201 ------------------ILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLD---KLRDSKELEVILNHQGLT 259 (743)
T ss_pred ------------------hhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh---ccCChHhhhhhcCCCCCC
Confidence 67889999999999998751 1224455544221 11222 678999999
Q ss_pred HHHHHHHcCCHHHHHHHHHh
Q 002922 730 PNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 730 PLHyAa~rGn~eiIeLL~~K 749 (865)
|||+|+..|+.+++++|.+.
T Consensus 260 PL~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 260 PLKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred chhhhhhcCCccHHHHHHHH
Confidence 99999999999999988774
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.3e-13 Score=149.41 Aligned_cols=162 Identities=21% Similarity=0.136 Sum_probs=125.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC---CCCCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV---LDKPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~---~dg~~~-- 663 (865)
.++||-++--++-++|++|++++++ |+ ..|..|+||||.|+.-++..||++||++|++.. .++..+
T Consensus 74 lTalhq~~id~~~e~v~~l~e~ga~--Vn-------~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~d 144 (527)
T KOG0505|consen 74 LTALHQACIDDNLEMVKFLVENGAN--VN-------AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYD 144 (527)
T ss_pred chhHHHHHhcccHHHHHHHHHhcCC--cc-------ccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccc
Confidence 4899999999999999999999854 32 347789999999999999999999999998643 222110
Q ss_pred ----------------------------hhHHHHh-hh-cCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCC
Q 002922 664 ----------------------------RQKQLVD-RA-GSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGS 713 (865)
Q Consensus 664 ----------------------------~~k~LV~-~~-s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~ 713 (865)
..+.+.. .. -.+-+...++.+..|-|.||+|+.+|..+ +.++|+..
T Consensus 145 l~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e-~~~lLl~a--- 220 (527)
T KOG0505|consen 145 LAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTE-VAALLLQA--- 220 (527)
T ss_pred cccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHH-HHHHHHHh---
Confidence 0111111 00 00013456788888999999999997655 99999874
Q ss_pred CCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 714 VGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 714 Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+.+++++|.+||||||+|+.=|..+.+++|+.++++ +. -+|++++++...
T Consensus 221 ---g~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t-~~g~~p~dv~de 273 (527)
T KOG0505|consen 221 ---GYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKT-KMGETPLDVADE 273 (527)
T ss_pred ---ccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhh-hcCCCCccchhh
Confidence 467899999999999999999999999999998665 33 589999999876
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-13 Score=140.96 Aligned_cols=119 Identities=22% Similarity=0.255 Sum_probs=96.8
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
.+||||+..|+.++|+.||..|+..| ..++...||||+|+..|+++||..||++.+
T Consensus 36 splhwaakegh~aivemll~rgarvn---------~tnmgddtplhlaaahghrdivqkll~~ka--------------- 91 (448)
T KOG0195|consen 36 SPLHWAAKEGHVAIVEMLLSRGARVN---------STNMGDDTPLHLAAAHGHRDIVQKLLSRKA--------------- 91 (448)
T ss_pred chhhhhhhcccHHHHHHHHhcccccc---------cccCCCCcchhhhhhcccHHHHHHHHHHhc---------------
Confidence 68999999999999999999885533 336777899999999999999999999965
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
|+|+++..|.||||||+--| .+.|.+-|++ .||-||..+.+|.|||+.|--.=...+.++.++
T Consensus 92 ---------dvnavnehgntplhyacfwg-ydqiaedli~------~ga~v~icnk~g~tpldkakp~l~~~l~e~aek 154 (448)
T KOG0195|consen 92 ---------DVNAVNEHGNTPLHYACFWG-YDQIAEDLIS------CGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEK 154 (448)
T ss_pred ---------ccchhhccCCCchhhhhhhc-HHHHHHHHHh------ccceeeecccCCCCchhhhchHHHHHHHHHHHH
Confidence 47889999999999999885 6668998965 457789999999999998864322233334443
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.3e-13 Score=136.86 Aligned_cols=145 Identities=17% Similarity=0.088 Sum_probs=103.7
Q ss_pred HHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCch------
Q 002922 591 LLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGS------ 663 (865)
Q Consensus 591 LL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg~~~------ 663 (865)
.++-|.-.++...+..+|.+++.+| +.+..+++|+.++|...+.+.+.+|..+..|... .|..+
T Consensus 99 ~~~v~ap~~s~~k~sttltN~~rgn---------evs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa 169 (296)
T KOG0502|consen 99 ALLVAAPCGSVDKVSTTLTNGARGN---------EVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAA 169 (296)
T ss_pred hhhhcCCCCCcceeeeeecccccCC---------ccccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHh
Confidence 4566666778888889998876543 3456799999999999999999998888765442 23221
Q ss_pred -hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHH
Q 002922 664 -RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742 (865)
Q Consensus 664 -~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ei 742 (865)
....+|..+.+ .+++|++.+++-.|+|.+|... ++-+||++||+- +.|||..|.+|-|||-||++.||.++
T Consensus 170 ~G~i~vV~fLL~-~GAdp~~lgk~resALsLAt~g-gytdiV~lLL~r------~vdVNvyDwNGgTpLlyAvrgnhvkc 241 (296)
T KOG0502|consen 170 KGHIPVVQFLLN-SGADPDALGKYRESALSLATRG-GYTDIVELLLTR------EVDVNVYDWNGGTPLLYAVRGNHVKC 241 (296)
T ss_pred cCchHHHHHHHH-cCCChhhhhhhhhhhHhHHhcC-ChHHHHHHHHhc------CCCcceeccCCCceeeeeecCChHHH
Confidence 23344443222 2567777777778888887765 455588877653 36778888888888888888888888
Q ss_pred HHHHHHhhhh
Q 002922 743 IHLVQRKINK 752 (865)
Q Consensus 743 IeLL~~K~~~ 752 (865)
+|.|+..+++
T Consensus 242 ve~Ll~sGAd 251 (296)
T KOG0502|consen 242 VESLLNSGAD 251 (296)
T ss_pred HHHHHhcCCC
Confidence 8888877665
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-12 Score=129.41 Aligned_cols=116 Identities=23% Similarity=0.180 Sum_probs=99.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
++||=|+++|+..+|+.||..+++ ++++...|+||||-|++-+|.+++-+||++|+|
T Consensus 99 TpLHRAaYn~h~div~~ll~~gAn---------~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaD-------------- 155 (228)
T KOG0512|consen 99 TPLHRAAYNGHLDIVHELLLSGAN---------KEAKTNEGWTPLHSACKWNNFEVAGRLLQHGAD-------------- 155 (228)
T ss_pred cHHHHHHhcCchHHHHHHHHccCC---------cccccccCccchhhhhcccchhHHHHHHhccCc--------------
Confidence 899999999999999999977643 345567899999999999999999999999875
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI 743 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiI 743 (865)
||+...+.+||||+||...+..+.+.+|+.++. +. .-.++..|.||+++|.+.+...++
T Consensus 156 ----------VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry---i~--pg~~nn~eeta~~iARRT~~s~~l 214 (228)
T KOG0512|consen 156 ----------VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY---IH--PGLKNNLEETAFDIARRTSMSHYL 214 (228)
T ss_pred ----------ccccccccchhhHHhhcccchHHHHHHHhhccc---cC--hhhhcCccchHHHHHHHhhhhHHH
Confidence 678888899999999998888889999988763 22 256789999999999998876554
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.7e-12 Score=112.64 Aligned_cols=93 Identities=28% Similarity=0.288 Sum_probs=82.3
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|.||||.|++.++.+++++|++++++ .+..+..|.||||+|+..++.+ ++++
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~------------------------~~~~~~~g~~~l~~a~~~~~~~-~~~~ 58 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGAD------------------------VNAKDNDGRTPLHLAAKNGHLE-IVKL 58 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCC------------------------CCccCCCCCcHHHHHHHcCCHH-HHHH
Confidence 35689999999999999999999999864 3567889999999999998876 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKI 750 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~ 750 (865)
|+..+ ++++..|..|.||+|+|+..++.+++++|.++.
T Consensus 59 ll~~~------~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 59 LLEKG------ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96 (126)
T ss_pred HHHcC------CCccccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 98753 577899999999999999999999999999874
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6e-11 Score=141.12 Aligned_cols=113 Identities=22% Similarity=0.148 Sum_probs=95.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
...|+.|+.+|..++++.||+.+++. +..+..|+||||+|+.+|+.++|++||++|++
T Consensus 83 ~~~L~~aa~~G~~~~vk~LL~~Gadi---------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad------------- 140 (664)
T PTZ00322 83 TVELCQLAASGDAVGARILLTGGADP---------NCRDYDGRTPLHIACANGHVQVVRVLLEFGAD------------- 140 (664)
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC---------CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-------------
Confidence 45689999999999999999887542 23466799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC-CCCCccccccccCCCCCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP-GSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp-~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
+|.+|..|+||||+|+.+++.+ ++++|++++ ..+..+|+.+..+.+|+||+..+.
T Consensus 141 -----------vn~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 141 -----------PTLLDKDGKTPLELAEENGFRE-VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred -----------CCCCCCCCCCHHHHHHHCCcHH-HHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 6788999999999999997766 999998752 235668899999999998887665
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-11 Score=144.75 Aligned_cols=151 Identities=21% Similarity=0.095 Sum_probs=82.3
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCC--c--cCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC---CCCC-
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGT--V--DTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV---LDKP- 661 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~an--V--~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~---~dg~- 661 (865)
.=|.-|++.|..+.+.+||+...... . .....+.+..|..|.|+||-|+.+|+.+|+++|+++.+-.. ..+.
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~ 84 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL 84 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence 34667899999999999997643211 0 01112233457789999999999999999999999975221 0010
Q ss_pred -----ch-hhHHHHhh-hcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 662 -----GS-RQKQLVDR-AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 662 -----~~-~~k~LV~~-~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
++ +.+++|+. ..+. ..+|+....|.||||+||.+++.+ ++.+|+.+ +||--.+|+.+.|+|+.|
T Consensus 85 plhlaaw~g~~e~vkmll~q~--d~~na~~~e~~tplhlaaqhgh~d-vv~~Ll~~------~adp~i~nns~~t~ldlA 155 (854)
T KOG0507|consen 85 PLHLAAWNGNLEIVKMLLLQT--DILNAVNIENETPLHLAAQHGHLE-VVFYLLKK------NADPFIRNNSKETVLDLA 155 (854)
T ss_pred eEEehhhcCcchHHHHHHhcc--cCCCcccccCcCccchhhhhcchH-HHHHHHhc------CCCccccCcccccHHHHH
Confidence 11 23333331 1111 224444445555555555544443 44444432 233334445555555555
Q ss_pred HHcCCHHHHHHHHHh
Q 002922 735 SLRAHHSYIHLVQRK 749 (865)
Q Consensus 735 a~rGn~eiIeLL~~K 749 (865)
++-|..++|++|.++
T Consensus 156 ~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 156 SRFGRAEVVQMLLQK 170 (854)
T ss_pred HHhhhhHHHHHHhhh
Confidence 555555555444443
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-11 Score=101.39 Aligned_cols=49 Identities=39% Similarity=0.428 Sum_probs=30.8
Q ss_pred CCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 679 KPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 679 d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
++|.+|..|.||||+||.+++.+ +|++|+.. +++++++|..|+||||||
T Consensus 8 ~~n~~d~~G~T~LH~A~~~g~~~-~v~~Ll~~------g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 8 DVNAQDKYGNTPLHWAARYGHSE-VVRLLLQN------GADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -TT---TTS--HHHHHHHHT-HH-HHHHHHHC------T--TT---TTS--HHHH-
T ss_pred CCcCcCCCCCcHHHHHHHcCcHH-HHHHHHHC------cCCCCCCcCCCCCHHHhC
Confidence 68999999999999999998776 99999854 588999999999999998
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.5e-11 Score=140.83 Aligned_cols=87 Identities=25% Similarity=0.290 Sum_probs=79.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+.||.|+..|+.++|++||++|++ +|.+|..|+||||+||.+++.+ ++++|++.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad------------------------in~~d~~G~TpLh~Aa~~g~~e-iv~~LL~~- 137 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD------------------------PNCRDYDGRTPLHIACANGHVQ-VVRVLLEF- 137 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC------------------------CCCcCCCCCcHHHHHHHCCCHH-HHHHHHHC-
Confidence 569999999999999999999864 5788999999999999998776 99999874
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
||++|++|.+|.||||+|+..|+.+++++|+.+
T Consensus 138 -----Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 138 -----GADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred -----CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 588999999999999999999999999999987
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.5e-11 Score=140.42 Aligned_cols=109 Identities=18% Similarity=0.017 Sum_probs=84.3
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch---
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS--- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~--- 663 (865)
++||-|+-+|+..++++||+.-+- ....+..|++|||+|++.|+.+||++||.++...++ .+..+
T Consensus 51 Talhha~Lng~~~is~llle~ea~---------ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDYEAL---------LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHL 121 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcchhh---------hhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccch
Confidence 899999999999999999976322 122356799999999999999999999998854442 12211
Q ss_pred ----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 664 ----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 664 ----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
...+++..+. .|+.++-.+++.+.|+|-+|+..+..+ ||..|+.
T Consensus 122 aaqhgh~dvv~~Ll-~~~adp~i~nns~~t~ldlA~qfgr~~-Vvq~ll~ 169 (854)
T KOG0507|consen 122 AAQHGHLEVVFYLL-KKNADPFIRNNSKETVLDLASRFGRAE-VVQMLLQ 169 (854)
T ss_pred hhhhcchHHHHHHH-hcCCCccccCcccccHHHHHHHhhhhH-HHHHHhh
Confidence 3455555332 246788899999999999999998777 9999976
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-11 Score=96.83 Aligned_cols=54 Identities=33% Similarity=0.438 Sum_probs=43.2
Q ss_pred CchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 687 GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 687 G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
|+||||+||..++.+ +++.|++. ++++|.+|.+|+||||+|+++||.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~-~~~~Ll~~------~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLE-IVKLLLEH------GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HH-HHHHHHHT------TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999997765 99999875 4778999999999999999999999999885
|
... |
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-10 Score=94.81 Aligned_cols=54 Identities=31% Similarity=0.353 Sum_probs=43.4
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
|+||||+|++.|+.+++++|+++|+ ++|.+|..|+||||+|+.+++.+ ++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~------------------------din~~d~~g~t~lh~A~~~g~~~-~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGA------------------------DINAQDEDGRTPLHYAAKNGNID-IVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTS------------------------GTT-B-TTS--HHHHHHHTT-HH-HHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCC------------------------CCCCCCCCCCCHHHHHHHccCHH-HHHHHC
Confidence 6899999999999999999999975 46788999999999999998776 999885
|
... |
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.7e-10 Score=108.85 Aligned_cols=113 Identities=27% Similarity=0.301 Sum_probs=91.5
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC-----hH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD-----AE 701 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~-----~e 701 (865)
+..+.+++|.|+..+..+++++|+..|++ ++.++..|.||||+|+..++ .+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------------~~~~~~~g~t~l~~a~~~~~~~~~~~~ 125 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLASGAD------------------------VNAKDADGDTPLHLAALNGNPPEGNIE 125 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHcCCC------------------------cccccCCCCcHHHHHHhcCCcccchHH
Confidence 34578999999999999999999999864 57899999999999999987 66
Q ss_pred HHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCC--CCCceEeecCCC
Q 002922 702 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSS--ESGRVILDIPGS 767 (865)
Q Consensus 702 ~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~~--~~~~v~l~i~~~ 767 (865)
++++|++.+.. ....+.+|.+|+||||+|+..|+.+++++|+...++... ..|++.++++..
T Consensus 126 -~~~~ll~~g~~---~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~ 189 (235)
T COG0666 126 -VAKLLLEAGAD---LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAK 189 (235)
T ss_pred -HHHHHHHcCCC---CCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcc
Confidence 99999875420 015677799999999999999999999999998665321 456666666544
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-10 Score=94.26 Aligned_cols=48 Identities=33% Similarity=0.368 Sum_probs=31.4
Q ss_pred chHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHH
Q 002922 623 SSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVA 694 (865)
Q Consensus 623 ~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlA 694 (865)
.+..|..|+||||+|+++|+.++|++||++|+ +++++|..|+||||+|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~------------------------d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA------------------------DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHHCT--------------------------TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC------------------------CCCCCcCCCCCHHHhC
Confidence 34557889999999999999999999998876 4688999999999998
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-09 Score=115.97 Aligned_cols=127 Identities=24% Similarity=0.217 Sum_probs=104.5
Q ss_pred ccccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 585 FKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 585 i~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
+.--+.+|.-+++.|..+-+..||....+ + +..|..||++|.-|+++|+.++|++||++|+|+|.
T Consensus 9 ld~~~~~Lle~i~Kndt~~a~~LLs~vr~--v-------n~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~------ 73 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEAALALLSTVRQ--V-------NQRDPSGMSVLAHAAYKGNLTLVELLLELGADVND------ 73 (396)
T ss_pred ccchhhHHHHHHccCcHHHHHHHHHHhhh--h-------hccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCc------
Confidence 33445788899999999999999977432 2 23466799999999999999999999999998652
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
-++..+.||||+||..|+.+ |-.+|++.| |.....+.-|+|+-..|+.-||.+-|.
T Consensus 74 -----------------~qhg~~YTpLmFAALSGn~d-vcrllldaG------a~~~~vNsvgrTAaqmAAFVG~H~CV~ 129 (396)
T KOG1710|consen 74 -----------------KQHGTLYTPLMFAALSGNQD-VCRLLLDAG------ARMYLVNSVGRTAAQMAAFVGHHECVA 129 (396)
T ss_pred -----------------ccccccccHHHHHHHcCCch-HHHHHHhcc------CccccccchhhhHHHHHHHhcchHHHH
Confidence 24557899999999998765 999998754 556788999999999999999999998
Q ss_pred HHHHhh
Q 002922 745 LVQRKI 750 (865)
Q Consensus 745 LL~~K~ 750 (865)
++-+++
T Consensus 130 iINN~~ 135 (396)
T KOG1710|consen 130 IINNHI 135 (396)
T ss_pred HHhccc
Confidence 877653
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.2e-10 Score=103.63 Aligned_cols=89 Identities=26% Similarity=0.258 Sum_probs=76.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCC
Q 002922 634 LHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGS 713 (865)
Q Consensus 634 LH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~ 713 (865)
..+++++|..+-|+-....|-| ||..- +|+|||||||-++..+ |+++|+.
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~n------------------------Vn~~~-ggR~plhyAAD~GQl~-ilefli~---- 55 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLN------------------------VNEIY-GGRTPLHYAADYGQLS-ILEFLIS---- 55 (117)
T ss_pred HhhhhccCcHHHHHHHHHcccc------------------------HHHHh-CCcccchHhhhcchHH-HHHHHHH----
Confidence 5688999999989887777643 34333 7999999999998877 9999954
Q ss_pred CCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 714 VGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 714 Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
+||+|+.+|.+|.|||--|++-||.+.|++|.++.+|+.
T Consensus 56 --iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt 94 (117)
T KOG4214|consen 56 --IGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRT 94 (117)
T ss_pred --hccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccc
Confidence 679999999999999999999999999999999999876
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9e-10 Score=124.55 Aligned_cols=102 Identities=22% Similarity=0.253 Sum_probs=84.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
-+|..|+..|-.++|.-.|..-- |+...+..|.||||-|++.++.+ ||++|++
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~------------------------DpSqpNdEGITaLHNAiCaghye-IVkFLi~-- 604 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVT------------------------DPSQPNDEGITALHNAICAGHYE-IVKFLIE-- 604 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhc------------------------CCCCCCccchhHHhhhhhcchhH-HHHHHHh--
Confidence 56778899999999998886632 45667788999999999999988 9999976
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEeecCCCccccccc
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSK 774 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~~~~~~v~l~i~~~~~~~~~~ 774 (865)
.|||||+.|.+||||||+|+.-|+.-+++.|+..++..- +.++++..+-
T Consensus 605 ----~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaavf----------AsTlSDmeTa 653 (752)
T KOG0515|consen 605 ----FGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVF----------ASTLSDMETA 653 (752)
T ss_pred ----cCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEE----------eeecccccch
Confidence 469999999999999999999999999999998877533 5556555543
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-09 Score=123.79 Aligned_cols=118 Identities=18% Similarity=0.152 Sum_probs=89.8
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
-||.-|+-.|-.++|+..+...- ++..-+..|.|+||-||..||.+||+|||.+|+|
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~---------DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-------------- 608 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVT---------DPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-------------- 608 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhc---------CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc--------------
Confidence 46677788899999988876542 2222355799999999999999999999999864
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc-CCCCCCHHHHHHH--cCCHHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ-DSTGLTPNDYASL--RAHHSYIHLV 746 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNak-D~~G~TPLHyAa~--rGn~eiIeLL 746 (865)
||+.|.+||||||.||.-++.. |++.|.+.|+ -|-+. =.++.||.+..-. -|+....++|
T Consensus 609 ----------VNa~DSdGWTPLHCAASCNnv~-~ckqLVe~Ga------avfAsTlSDmeTa~eKCee~eeGY~~CsqyL 671 (752)
T KOG0515|consen 609 ----------VNAADSDGWTPLHCAASCNNVP-MCKQLVESGA------AVFASTLSDMETAAEKCEEMEEGYDQCSQYL 671 (752)
T ss_pred ----------ccCccCCCCchhhhhhhcCchH-HHHHHHhccc------eEEeeecccccchhhhcchhhhhHHHHHHHH
Confidence 7899999999999999987766 9999987653 33333 4678999876443 3555555555
Q ss_pred H
Q 002922 747 Q 747 (865)
Q Consensus 747 ~ 747 (865)
.
T Consensus 672 ~ 672 (752)
T KOG0515|consen 672 Y 672 (752)
T ss_pred H
Confidence 4
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.2e-09 Score=126.83 Aligned_cols=152 Identities=20% Similarity=0.181 Sum_probs=111.3
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC------
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL------ 658 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~------ 658 (865)
.+++||.|.-+ ++.++|+.||+..- .+..+ .-......|.||||+|+.+.+.++|++||+.|||+++
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p--~lind--~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~F 218 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFP--KLIND--IYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAF 218 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhH--HHhhh--hhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccc
Confidence 46999999984 35699999998742 11000 0001133599999999999999999999999999874
Q ss_pred ----CCC-c---------------h-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 659 ----DKP-G---------------S-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 659 ----dg~-~---------------~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
|++ . | +..+++..+-. +++|||++|..|.|-||.-+.+...+ +-+++++.+
T Consensus 219 F~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~-~gAd~~aqDS~GNTVLH~lVi~~~~~-My~~~L~~g 296 (782)
T KOG3676|consen 219 FCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA-HGADPNAQDSNGNTVLHMLVIHFVTE-MYDLALELG 296 (782)
T ss_pred cCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh-cCCCCCccccCCChHHHHHHHHHHHH-HHHHHHhcC
Confidence 221 0 0 45556664332 48999999999999999999885544 888888754
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
+ .+....++..|.|||.+|+.-|++++-+.+.++
T Consensus 297 a----~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 297 A----NALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred C----CccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 2 133788999999999999999999988644443
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.4e-09 Score=126.44 Aligned_cols=120 Identities=22% Similarity=0.148 Sum_probs=84.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCcc-CC-------C-CCchHHh-----hccccHHHHHHHcCCHHHHHHHHhcC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVD-TG-------D-HTSSELA-----ILEMGLLHKAVRRNCRPMVELLLNYA 653 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~-~~-------~-~s~~~~~-----~~G~TpLH~AV~~gn~eIVELLL~~G 653 (865)
.-++||.|+.+.++++|++||+.+++.+-- .| . .+-...+ .-|..||-+||.-|+.+||++|+++|
T Consensus 184 GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~g 263 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHG 263 (782)
T ss_pred CcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcC
Confidence 358999999999999999999999772210 11 0 0000001 12889999999999999999999999
Q ss_pred CCCCC-C--CCch-------hhHHHHhhhcCCcccC--CcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 654 PDNVL-D--KPGS-------RQKQLVDRAGSGFIFK--PNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 654 adi~~-d--g~~~-------~~k~LV~~~s~~y~~d--~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
||+++ | |+.. ...++-+.+. .++++ ...++..|.|||-+||..++.+ |.+.+++
T Consensus 264 Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L-~~ga~~l~~v~N~qgLTPLtLAaklGk~e-mf~~ile 329 (782)
T KOG3676|consen 264 ADPNAQDSNGNTVLHMLVIHFVTEMYDLAL-ELGANALEHVRNNQGLTPLTLAAKLGKKE-MFQHILE 329 (782)
T ss_pred CCCCccccCCChHHHHHHHHHHHHHHHHHH-hcCCCccccccccCCCChHHHHHHhhhHH-HHHHHHH
Confidence 99984 3 4332 1111112110 11334 7889999999999999998777 8888876
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.5e-09 Score=97.63 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=84.8
Q ss_pred HHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHh
Q 002922 591 LLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVD 670 (865)
Q Consensus 591 LL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~ 670 (865)
-..|++.+|-.+-||.....+ -||+ ..+.|++|||+|+-.|..+|.||||+.|++
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g--~nVn--------~~~ggR~plhyAAD~GQl~ilefli~iGA~--------------- 59 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEG--LNVN--------EIYGGRTPLHYAADYGQLSILEFLISIGAN--------------- 59 (117)
T ss_pred hHhhhhccCcHHHHHHHHHcc--ccHH--------HHhCCcccchHhhhcchHHHHHHHHHhccc---------------
Confidence 356889999998888877554 2332 245799999999999999999999999875
Q ss_pred hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 671 RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 671 ~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
++.+|+.|.|||--|+..++.. .|++||.. ||+...+.-+|.|.+..+-
T Consensus 60 ---------i~~kDKygITPLLsAvwEGH~~-cVklLL~~------GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 60 ---------IQDKDKYGITPLLSAVWEGHRD-CVKLLLQN------GADRTIHAPDGTALIEATE 108 (117)
T ss_pred ---------cCCccccCCcHHHHHHHHhhHH-HHHHHHHc------CcccceeCCCchhHHhhcc
Confidence 5789999999999999987655 99999876 4777888888988776553
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.8e-09 Score=121.29 Aligned_cols=145 Identities=19% Similarity=0.127 Sum_probs=113.6
Q ss_pred HHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhh
Q 002922 592 LEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDR 671 (865)
Q Consensus 592 L~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~ 671 (865)
+.-|+.+|..+=++.||..+++. +..+-+|.|+||-|+.-.+.+||+||+++|++
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~---------~~~n~DglTalhq~~id~~~e~v~~l~e~ga~---------------- 98 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASP---------NLCNVDGLTALHQACIDDNLEMVKFLVENGAN---------------- 98 (527)
T ss_pred HHhccccccHHHHHHHhccCCCc---------cccCCccchhHHHHHhcccHHHHHHHHHhcCC----------------
Confidence 44577788999999999776432 23356799999999999999999999999874
Q ss_pred hcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc-c---------------------------------
Q 002922 672 AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI-E--------------------------------- 717 (865)
Q Consensus 672 ~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~-g--------------------------------- 717 (865)
||+.|..||||||.||.-++.. |+.+|+..++.++. +
T Consensus 99 --------Vn~~d~e~wtPlhaaascg~~~-i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~ 169 (527)
T KOG0505|consen 99 --------VNAQDNEGWTPLHAAASCGYLN-IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAA 169 (527)
T ss_pred --------ccccccccCCcchhhcccccHH-HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHH
Confidence 6788999999999999876655 89888765433222 1
Q ss_pred -------------------ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCCcccc
Q 002922 718 -------------------AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGSIVDW 771 (865)
Q Consensus 718 -------------------A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~~~~~ 771 (865)
+..++++..|-|.||.|+.+|++++.+||++.+.+ ++ +-|=+.||-+.-|-++
T Consensus 170 R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D-~dgWtPlHAAA~Wg~~ 244 (527)
T KOG0505|consen 170 RKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKD-YDGWTPLHAAAHWGQE 244 (527)
T ss_pred hhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccccc-ccCCCcccHHHHhhhH
Confidence 55677787899999999999999999999987443 44 5677888877655544
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.6e-08 Score=117.54 Aligned_cols=218 Identities=16% Similarity=0.100 Sum_probs=142.6
Q ss_pred cCCceeEEec----chhHHHHHHHHHHHHhhhcc---chhhHHhhhhhhhHHhHHHHHHHhhhhhhccccccccCCCCCC
Q 002922 507 SSSFVPFIVA----EQEVCSEICMLESAIEAAEI---SDDFQKIAEKTEVKNQALDFLHEMGWLLHRSHLKFRVGHLHPN 579 (865)
Q Consensus 507 ~S~~~P~lVa----d~~iCsEl~~LE~~~~~~~~---~~~~~~~~~~~~sR~~A~~fL~eLGWLLq~s~~~~~l~~~~~~ 579 (865)
.-+|.|+|+| +-.++..|-.=-.++|+..- |...--.| ..-|.++.++|..-|.=-.+.+ ++
T Consensus 788 kkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac--sggr~~vvelLl~~gankehrn----vs----- 856 (2131)
T KOG4369|consen 788 KKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC--SGGRTRVVELLLNAGANKEHRN----VS----- 856 (2131)
T ss_pred cccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec--CCCcchHHHHHHHhhccccccc----hh-----
Confidence 4668999997 35677777666666665542 11000011 1235566666655541111111 11
Q ss_pred cceecccccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 002922 580 FYFFPFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659 (865)
Q Consensus 580 vd~fqi~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d 659 (865)
| -++|..|..-|+..+++.||..|.+.|-. ...++|..||+.|..+||.+.++.||+.|-|+++.
T Consensus 857 -D-------ytPlsla~Sggy~~iI~~llS~GseInSr-------tgSklgisPLmlatmngh~~at~~ll~~gsdiNaq 921 (2131)
T KOG4369|consen 857 -D-------YTPLSLARSGGYTKIIHALLSSGSEINSR-------TGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQ 921 (2131)
T ss_pred -h-------cCchhhhcCcchHHHHHHHhhcccccccc-------cccccCcchhhhhhhccccHHHHHHhcccchhccc
Confidence 1 16888888999999999999888553322 22457999999999999999999999999888752
Q ss_pred ----CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcc-----------
Q 002922 660 ----KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE----------- 717 (865)
Q Consensus 660 ----g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~g----------- 717 (865)
.+.. .+-++|.++. .|.+++..+-+.|+|||+-+|..|..+ |-.+|++.|+++...
T Consensus 922 IeTNrnTaltla~fqgr~evv~lLL-a~~anvehRaktgltplme~AsgGyvd-vg~~li~~gad~nasPvp~T~dtalt 999 (2131)
T KOG4369|consen 922 IETNRNTALTLALFQGRPEVVFLLL-AAQANVEHRAKTGLTPLMEMASGGYVD-VGNLLIAAGADTNASPVPNTWDTALT 999 (2131)
T ss_pred cccccccceeeccccCcchHHHHHH-HHhhhhhhhcccCCcccchhhcCCccc-cchhhhhcccccccCCCCCcCCccce
Confidence 1110 2333333221 123456777788888888888765544 666776544333221
Q ss_pred ------------------ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 718 ------------------AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 718 ------------------A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
|-+.+++.+|+|+|-+|+-.|+...+++|..+.+|
T Consensus 1000 i~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad 1052 (2131)
T KOG4369|consen 1000 IPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVAD 1052 (2131)
T ss_pred eecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccC
Confidence 56778899999999999999999999999988665
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-07 Score=114.70 Aligned_cols=160 Identities=14% Similarity=0.087 Sum_probs=121.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCc---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL--DKPG--- 662 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~--dg~~--- 662 (865)
+++.|-.||..|+.+++++|+..|+ +++..|..|.+||..|+..||..+|+.||++-+++.+ |.++
T Consensus 757 ~~t~LT~acaggh~e~vellv~rga---------niehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~ 827 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVVRGA---------NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTM 827 (2131)
T ss_pred ccccccccccCccHHHHHHHHHhcc---------cccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCce
Confidence 5689999999999999999997763 3456688899999999999999999999999887763 3221
Q ss_pred ------hhhHHHHhh-hcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc--CCCCCCHHHH
Q 002922 663 ------SRQKQLVDR-AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ--DSTGLTPNDY 733 (865)
Q Consensus 663 ------~~~k~LV~~-~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNak--D~~G~TPLHy 733 (865)
...+.+|++ +++ +++-..++-...|||-+|+.-+..+ ||.+|++.|.+ ||.+ ..-|..||++
T Consensus 828 lSlacsggr~~vvelLl~~--gankehrnvsDytPlsla~Sggy~~-iI~~llS~Gse------InSrtgSklgisPLml 898 (2131)
T KOG4369|consen 828 LSLACSGGRTRVVELLLNA--GANKEHRNVSDYTPLSLARSGGYTK-IIHALLSSGSE------INSRTGSKLGISPLML 898 (2131)
T ss_pred EEEecCCCcchHHHHHHHh--hccccccchhhcCchhhhcCcchHH-HHHHHhhcccc------cccccccccCcchhhh
Confidence 123334442 222 4455677888999999999865545 99999886544 4555 4679999999
Q ss_pred HHHcCCHHHHHHHHHhhhhcC---CCCCceEeecC
Q 002922 734 ASLRAHHSYIHLVQRKINKKS---SESGRVILDIP 765 (865)
Q Consensus 734 Aa~rGn~eiIeLL~~K~~~~~---~~~~~v~l~i~ 765 (865)
|.++||...+.+|.++.+|.. -.|..+.|.++
T Consensus 899 atmngh~~at~~ll~~gsdiNaqIeTNrnTaltla 933 (2131)
T KOG4369|consen 899 ATMNGHQAATLSLLQPGSDINAQIETNRNTALTLA 933 (2131)
T ss_pred hhhccccHHHHHHhcccchhccccccccccceeec
Confidence 999999999999998755522 14666666665
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.1e-07 Score=101.06 Aligned_cols=86 Identities=35% Similarity=0.402 Sum_probs=72.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
--||-.|+.++.+.+=-||..||+. |..++ .|.||||.||..|..- =+++|.=
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~------------------------N~~hpekg~TpLHvAAk~Gq~~-Q~ElL~v- 188 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQA------------------------NFFHPEKGNTPLHVAAKAGQIL-QAELLAV- 188 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHccccc------------------------CCCCcccCCchhHHHHhccchh-hhhHHhh-
Confidence 4699999999999999999999864 33333 4899999999998766 6788854
Q ss_pred CCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 711 PGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 711 p~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
.|||+++.|.+|.||++||...||.++.+-|..
T Consensus 189 -----YGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 189 -----YGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred -----ccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 368999999999999999999999999986654
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-06 Score=94.15 Aligned_cols=92 Identities=21% Similarity=0.210 Sum_probs=78.5
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
...+|.-|+-+|..+-...||+-.- ++|.+|++|.|||..||..|+.+ +|++|++
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr------------------------~vn~~D~sGMs~LahAaykGnl~-~v~lll~ 66 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVR------------------------QVNQRDPSGMSVLAHAAYKGNLT-LVELLLE 66 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhh------------------------hhhccCCCcccHHHHHHhcCcHH-HHHHHHH
Confidence 4578999999999999998887631 36889999999999999998876 9999987
Q ss_pred CCCCCCcccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 710 DPGSVGIEAWKSAQ-DSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 710 dp~~Ig~gA~VNak-D~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
. |||||.+ +..++||||+|+..||.++..+|..-+++
T Consensus 67 ~------gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~ 104 (396)
T KOG1710|consen 67 L------GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGAR 104 (396)
T ss_pred h------CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCc
Confidence 4 5778876 67899999999999999999999986443
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.1e-06 Score=101.15 Aligned_cols=93 Identities=22% Similarity=0.117 Sum_probs=75.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
.-|.+|+.......+-+||.||.... . +-...+.+|+||||+||..++.. +..+|+
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e-------------~-------~~t~~~~~grt~LHLa~~~gnVv-l~QLLi--- 681 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREE-------------V-------NETCGEGDGRTALHLAARKGNVV-LAQLLI--- 681 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchh-------------h-------hccccCCCCcchhhhhhhhcchh-HHHHHH---
Confidence 45778999999999999999985311 0 11223567899999999998866 777885
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
.+|+|+-++|..|.|+|.||.+.|..+.+.+|++++.
T Consensus 682 ---Wyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 682 ---WYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred ---HhCccceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999855
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2e-06 Score=98.50 Aligned_cols=90 Identities=26% Similarity=0.203 Sum_probs=71.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
-|||+|+.....+-.+.++...+. ..+|.+|..|.||||+|+..++.+ .+.+|+..
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~----------------------~~id~~D~~g~TpLhlAV~Lg~~~-~a~~Ll~a- 77 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVS----------------------LVIDRRDPPGRTPLHLAVRLGHVE-AARILLSA- 77 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhh----------------------ceeccccCCCCccHHHHHHhcCHH-HHHHHHhc-
Confidence 459999988876655544433221 136889999999999999999887 77888654
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKI 750 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~ 750 (865)
+|++..+|+.||||||-|+..|+..+|..|++|.
T Consensus 78 -----~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 78 -----GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred -----CCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 5888999999999999999999999998777653
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.9e-06 Score=62.58 Aligned_cols=29 Identities=24% Similarity=0.137 Sum_probs=26.5
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNV 657 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~ 657 (865)
.|+||||+|+++|+.+||++||++|+|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 38899999999999999999999998754
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.4e-06 Score=95.06 Aligned_cols=95 Identities=26% Similarity=0.350 Sum_probs=79.3
Q ss_pred hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 628 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 628 ~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
-.-.++||+|++.|+.+||++||.||+.- -.|+.|..|.|+||-||..++.. |-.+|
T Consensus 897 ~~~~sllh~a~~tg~~eivkyildh~p~e----------------------lld~~de~get~lhkaa~~~~r~-vc~~l 953 (1004)
T KOG0782|consen 897 PDHCSLLHYAAKTGNGEIVKYILDHGPSE----------------------LLDMADETGETALHKAACQRNRA-VCQLL 953 (1004)
T ss_pred cchhhHHHHHHhcCChHHHHHHHhcCCHH----------------------HHHHHhhhhhHHHHHHHHhcchH-HHHHH
Confidence 34579999999999999999999999741 13667889999999999997654 78888
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 708 L~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
.+. ||..-..|..|.||-..|-+.|..+++..|..+-+
T Consensus 954 vda------gasl~ktd~kg~tp~eraqqa~d~dlaayle~rq~ 991 (1004)
T KOG0782|consen 954 VDA------GASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQN 991 (1004)
T ss_pred Hhc------chhheecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence 653 46678889999999999999999999988887643
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.4e-05 Score=95.51 Aligned_cols=130 Identities=21% Similarity=0.185 Sum_probs=83.6
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
|-.++||++++.++.-+++++++.. + ....+.+.+|..-+|+ |..++.+.+-+|+.+.
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~~-~-------~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~------------- 630 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEWA-G-------SGDLELDRDGQGVIHF-CAALGYEWAFLPISAD------------- 630 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhccc-c-------cCchhhcccCCChhhH-hhhcCCceeEEEEeec-------------
Confidence 4456666666666666666666540 0 1112334445555666 3334445554444432
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+-.+|.+|..||||||+|+.+|..+ ++..|.+-+.+-+.-.|-+.-+-.|.|+-+.|..+|+..+..+|
T Consensus 631 ----------~~ai~i~D~~G~tpL~wAa~~G~e~-l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 631 ----------GVAIDIRDRNGWTPLHWAAFRGREK-LVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred ----------ccccccccCCCCcccchHhhcCHHH-HHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence 1247899999999999999997544 89988754433333333344445699999999999999999888
Q ss_pred HHh
Q 002922 747 QRK 749 (865)
Q Consensus 747 ~~K 749 (865)
..|
T Consensus 700 se~ 702 (975)
T KOG0520|consen 700 SEK 702 (975)
T ss_pred hhh
Confidence 876
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.6e-06 Score=98.99 Aligned_cols=81 Identities=25% Similarity=0.226 Sum_probs=69.3
Q ss_pred HHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHH
Q 002922 625 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENV 703 (865)
Q Consensus 625 ~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~I 703 (865)
-+|..|+|+||.|+..|..++++.||+||++ ++.+|. .|+||||-|..+|+.+ .
T Consensus 47 ikD~~GR~alH~~~S~~k~~~l~wLlqhGid------------------------v~vqD~ESG~taLHRaiyyG~id-c 101 (1267)
T KOG0783|consen 47 IKDRYGRTALHIAVSENKNSFLRWLLQHGID------------------------VFVQDEESGYTALHRAIYYGNID-C 101 (1267)
T ss_pred HHHhhccceeeeeeccchhHHHHHHHhcCce------------------------eeeccccccchHhhHhhhhchHH-H
Confidence 3467799999999999999999999999976 455664 6999999999999887 8
Q ss_pred HHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 704 LDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 704 VelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+-+||.++ +-...+|.+|.+||++-++
T Consensus 102 a~lLL~~g------~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 102 ASLLLSKG------RSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HHHHHhcC------CceEEecccCCCHHHHHhh
Confidence 88888764 4568899999999998776
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=97.98 E-value=7.1e-06 Score=60.90 Aligned_cols=33 Identities=36% Similarity=0.460 Sum_probs=26.4
Q ss_pred CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC
Q 002922 686 AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS 725 (865)
Q Consensus 686 ~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~ 725 (865)
+|+||||+||.+++.+ ++++|++. ||++|++|+
T Consensus 1 dG~TpLh~A~~~~~~~-~v~~Ll~~------ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPD-IVKLLLKH------GADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHH-HHHHHHHT------TSCTTCBCT
T ss_pred CcccHHHHHHHHHHHH-HHHHHHHC------cCCCCCCCC
Confidence 5889999999987766 99999764 577888874
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.1e-05 Score=59.82 Aligned_cols=29 Identities=31% Similarity=0.253 Sum_probs=26.4
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNV 657 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~ 657 (865)
+|+||||+|+.+|+.++|++||++|++++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 48999999999999999999999998643
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.8e-06 Score=92.61 Aligned_cols=93 Identities=20% Similarity=0.125 Sum_probs=80.0
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.+...+++|++.|.....+-+.-.|.| .+.+|-+.+|+||+||..|+.+ ++++|+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D------------------------~~~~DyD~RTaLHvAAaEG~v~-v~kfl~ 559 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMD------------------------LETKDYDDRTALHVAAAEGHVE-VVKFLL 559 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhccc------------------------ccccccccchhheeecccCcee-HHHHHH
Confidence 466889999999999999877766643 5778999999999999988776 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
+. ++.+.+.+|.-|+|||+-|..-+|.+++++|++...
T Consensus 560 ~~-----~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 560 NA-----CKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HH-----HcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 73 356789999999999999999999999999998643
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=97.86 E-value=1.3e-05 Score=59.17 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=17.9
Q ss_pred CCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 686 AGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 686 ~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+|+||||+||..++.| +|++|++.+
T Consensus 1 ~G~T~Lh~A~~~g~~e-~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIE-IVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHH-HHHHHHHcC
Confidence 4778888888777665 778777643
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.86 E-value=3.7e-05 Score=87.62 Aligned_cols=87 Identities=22% Similarity=0.196 Sum_probs=73.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
..-||-+++-|+.++.--||..|+++|.- .+ ..|.||||.|++.|+...+|+|+-||||
T Consensus 134 srQLhasvRt~nlet~LRll~lGA~~N~~----hp----ekg~TpLHvAAk~Gq~~Q~ElL~vYGAD------------- 192 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCLRLLSLGAQANFF----HP----EKGNTPLHVAAKAGQILQAELLAVYGAD------------- 192 (669)
T ss_pred HHHHHHHhhcccHHHHHHHHHcccccCCC----Cc----ccCCchhHHHHhccchhhhhHHhhccCC-------------
Confidence 46799999999999999999999887752 11 2588999999999999999999999875
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
|++.|.+|.||+-||-..|+.+ +.+-|+
T Consensus 193 -----------~~a~d~~GmtP~~~AR~~gH~~-laeRl~ 220 (669)
T KOG0818|consen 193 -----------PGAQDSSGMTPVDYARQGGHHE-LAERLV 220 (669)
T ss_pred -----------CCCCCCCCCcHHHHHHhcCchH-HHHHHH
Confidence 6789999999999999887765 655553
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.2e-05 Score=91.83 Aligned_cols=126 Identities=15% Similarity=0.038 Sum_probs=94.2
Q ss_pred HHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhh
Q 002922 592 LEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDR 671 (865)
Q Consensus 592 L~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~ 671 (865)
...|+++|...+|++.|+.... ..++++..|-.|+++||.|+.+.|.+++|+|+++..
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~-----~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~----------------- 86 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAV-----SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSS----------------- 86 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccc-----cccchhccChHhhhceecccccccHHHHHHHhcCcc-----------------
Confidence 3468999999999999987533 224555667789999999999999999999999952
Q ss_pred hcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCC----ccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 672 AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVG----IEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 672 ~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig----~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
.. .-+|-+|+..+..+ +|++|+.++.... .+..-.+.=.-+.||+.+||.+||+|++++|+
T Consensus 87 ---------~~-----gdALL~aI~~~~v~-~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll 151 (822)
T KOG3609|consen 87 ---------EE-----GDALLLAIAVGSVP-LVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLL 151 (822)
T ss_pred ---------cc-----chHHHHHHHHHHHH-HHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHH
Confidence 12 34788888876555 9999988652110 01111123345799999999999999999999
Q ss_pred HhhhhcC
Q 002922 748 RKINKKS 754 (865)
Q Consensus 748 ~K~~~~~ 754 (865)
+|.+...
T Consensus 152 ~kg~~i~ 158 (822)
T KOG3609|consen 152 TRGHCIP 158 (822)
T ss_pred HcCCCCC
Confidence 9977654
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=4.6e-05 Score=87.67 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=65.4
Q ss_pred hHHHHHHHCC-CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 590 WLLEFSMEHD-WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 590 tLL~fAverg-~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.+||+++-.. +-.+.+.|+.. +...++ .+|..|.||||.||.-|+.+-+++||..|++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~-~~~~id-------~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad------------- 80 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAK-VSLVID-------RRDPPGRTPLHLAVRLGHVEAARILLSAGAD------------- 80 (560)
T ss_pred cccchhhhccchhhHHHHHhhh-hhceec-------cccCCCCccHHHHHHhcCHHHHHHHHhcCCC-------------
Confidence 5688888665 55666666544 333332 2356789999999999999999999999875
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
+-.+++.||||||.|+++++.+.|.++|
T Consensus 81 -----------v~~kN~~gWs~L~EAv~~g~~q~i~~vl 108 (560)
T KOG0522|consen 81 -----------VSIKNNEGWSPLHEAVSTGNEQIITEVL 108 (560)
T ss_pred -----------ccccccccccHHHHHHHcCCHHHHHHHH
Confidence 3568889999999999999877444444
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.68 E-value=3.4e-05 Score=93.93 Aligned_cols=85 Identities=32% Similarity=0.335 Sum_probs=73.4
Q ss_pred hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 628 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 628 ~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
..|.|+||.|+.++..-++|+||++|++ +|+.|.-|.||||.+...++.. .+.+|
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~------------------------vn~~d~~g~~plh~~~~~g~~~-~~~~l 708 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGAD------------------------VNALDSKGRTPLHHATASGHTS-IACLL 708 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCc------------------------chhhhccCCCcchhhhhhcccc-hhhhh
Confidence 3588999999999999999999999864 6889999999999999988766 77777
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHH
Q 002922 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI 743 (865)
Q Consensus 708 L~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiI 743 (865)
++. +|+-++.|.+|++||++|..-.|.+++
T Consensus 709 l~~------~a~~~a~~~~~~~~l~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 709 LKR------GADPNAFDPDGKLPLDIAMEAANADIV 738 (785)
T ss_pred ccc------cccccccCccCcchhhHHhhhccccHH
Confidence 764 578899999999999999887555544
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.60 E-value=8.9e-05 Score=85.84 Aligned_cols=91 Identities=21% Similarity=0.087 Sum_probs=70.2
Q ss_pred HHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHh
Q 002922 591 LLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVD 670 (865)
Q Consensus 591 LL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~ 670 (865)
-|.-|+.......+-+||.++....++ -...+.+|+|+||+|++.||..+..|||-||+|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~-----~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d--------------- 686 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVN-----ETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD--------------- 686 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhh-----ccccCCCCcchhhhhhhhcchhHHHHHHHhCcc---------------
Confidence 344566666677788888877554432 112244689999999999999999999999864
Q ss_pred hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 671 RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 671 ~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+-++|..|+|||.||-..+.-| +++.|+.+|
T Consensus 687 ---------v~~rda~g~t~l~yar~a~sqe-c~d~llq~g 717 (749)
T KOG0705|consen 687 ---------VMARDAHGRTALFYARQAGSQE-CIDVLLQYG 717 (749)
T ss_pred ---------ceecccCCchhhhhHhhcccHH-HHHHHHHcC
Confidence 5678999999999999886545 999999865
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=97.47 E-value=4.2e-05 Score=91.23 Aligned_cols=64 Identities=23% Similarity=0.185 Sum_probs=57.1
Q ss_pred CcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHHHHhh
Q 002922 680 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLVQRKI 750 (865)
Q Consensus 680 ~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa~rGn~eiIeLL~~K~ 750 (865)
+|.+|..|+|+||+|+.-+..+ +++-|+.+ |+|++.+|. .|+||||-|...||.+-+-+|.+|.
T Consensus 45 anikD~~GR~alH~~~S~~k~~-~l~wLlqh------Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g 109 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNS-FLRWLLQH------GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG 109 (1267)
T ss_pred hhHHHhhccceeeeeeccchhH-HHHHHHhc------CceeeeccccccchHhhHhhhhchHHHHHHHHhcC
Confidence 5889999999999999987665 99999774 588999996 4999999999999999999999873
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0003 Score=72.63 Aligned_cols=64 Identities=20% Similarity=0.250 Sum_probs=58.7
Q ss_pred CCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcc-ccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 679 KPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE-AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 679 d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~g-A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
++|++|..|||||+.||+-+..+ .+.+|+. .| |||-+.|..|.+++.+|-..|+.+++++|-..
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~e-avsyllg------rg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNE-AVSYLLG------RGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchh-HHHHHhc------cCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 68999999999999999998777 8999954 45 89999999999999999999999999999886
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0011 Score=76.72 Aligned_cols=86 Identities=22% Similarity=0.175 Sum_probs=71.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchH---HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE---LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~---~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||||+.-|+-++||+|||++- ++. .+..|.|.||.|+..+++.++.+|+..|+..
T Consensus 899 ~~sllh~a~~tg~~eivkyildh~p----------~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl-------- 960 (1004)
T KOG0782|consen 899 HCSLLHYAAKTGNGEIVKYILDHGP----------SELLDMADETGETALHKAACQRNRAVCQLLVDAGASL-------- 960 (1004)
T ss_pred hhhHHHHHHhcCChHHHHHHHhcCC----------HHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh--------
Confidence 5799999999999999999999862 222 2456999999999999999999999999742
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
--+|..|.||-.-|-..++.+ +..+|-
T Consensus 961 ----------------~ktd~kg~tp~eraqqa~d~d-laayle 987 (1004)
T KOG0782|consen 961 ----------------RKTDSKGKTPQERAQQAGDPD-LAAYLE 987 (1004)
T ss_pred ----------------eecccCCCChHHHHHhcCCch-HHHHHh
Confidence 236778999999998888776 777773
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00049 Score=78.57 Aligned_cols=87 Identities=20% Similarity=0.174 Sum_probs=70.1
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
..++||+..|..+..+-++-.+.+ .+.+|.+.+|+||.|+..|+.++|++||+.-
T Consensus 508 i~~~~aa~~GD~~alrRf~l~g~D---------~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~---------------- 562 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQGMD---------LETKDYDDRTALHVAAAEGHVEVVKFLLNAC---------------- 562 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHhccc---------ccccccccchhheeecccCceeHHHHHHHHH----------------
Confidence 457899999988877777655533 2345777899999999999999999999762
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
..++|.+|.-|+|||--|...++.+ ++++|-+
T Consensus 563 -------kv~~~~kDRw~rtPlDdA~~F~h~~-v~k~L~~ 594 (622)
T KOG0506|consen 563 -------KVDPDPKDRWGRTPLDDAKHFKHKE-VVKLLEE 594 (622)
T ss_pred -------cCCCChhhccCCCcchHhHhcCcHH-HHHHHHH
Confidence 1268899999999999999998776 8988843
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00075 Score=82.55 Aligned_cols=90 Identities=27% Similarity=0.249 Sum_probs=74.3
Q ss_pred cccccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCch
Q 002922 584 PFKRFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGS 663 (865)
Q Consensus 584 qi~R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~ 663 (865)
+....+++||.|+..||..++++||+.+++ + +..+..|.||||.++..|+..++.+|++.|++
T Consensus 652 ~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~--v-------n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-------- 714 (785)
T KOG0521|consen 652 VLCIGCSLLHVAVGTGDSGAVELLLQNGAD--V-------NALDSKGRTPLHHATASGHTSIACLLLKRGAD-------- 714 (785)
T ss_pred hhhcccchhhhhhccchHHHHHHHHhcCCc--c-------hhhhccCCCcchhhhhhcccchhhhhcccccc--------
Confidence 334457999999999999999999999854 2 34577899999999999999999999999864
Q ss_pred hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 664 RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 664 ~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
+++.+++|++||++|....+.+ ++-+|
T Consensus 715 ----------------~~a~~~~~~~~l~~a~~~~~~d-~~~l~ 741 (785)
T KOG0521|consen 715 ----------------PNAFDPDGKLPLDIAMEAANAD-IVLLL 741 (785)
T ss_pred ----------------ccccCccCcchhhHHhhhcccc-HHHHH
Confidence 6888999999999998775544 44433
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0011 Score=81.45 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=77.1
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
...|+++||+|+..++..+++.++++ |- + .+.-|.+|.--+|+.|.. +.+ .+-
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~----------------------~--~~eld~d~qgV~hfca~l-g~e-wA~ 624 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGS----------------------G--DLELDRDGQGVIHFCAAL-GYE-WAF 624 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhccccc----------------------C--chhhcccCCChhhHhhhc-CCc-eeE
Confidence 45699999999999999999999998 31 1 233455556666776654 566 444
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh--------cCCCCCceEeecCC
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK--------KSSESGRVILDIPG 766 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~--------~~~~~~~v~l~i~~ 766 (865)
+|... .+..++.+|.+||||||+|+++|+..++..|..-.++ .+..+|-++.+++.
T Consensus 625 ll~~~-----~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 625 LPISA-----DGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred EEEee-----cccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh
Confidence 44321 2355799999999999999999999999888864332 22345666666654
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0059 Score=74.08 Aligned_cols=92 Identities=22% Similarity=0.197 Sum_probs=67.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+.+|+.|+++.+.+++++||+.... .| .+|..|+..+..++||+|+.|-..... +..
T Consensus 63 r~al~iai~nenle~~eLLl~~~~~---------------~g-dALL~aI~~~~v~~VE~ll~~~~~~~~-------~~~ 119 (822)
T KOG3609|consen 63 RLALHIAIDNENLELQELLLDTSSE---------------EG-DALLLAIAVGSVPLVELLLVHFVDAPY-------LER 119 (822)
T ss_pred hhceecccccccHHHHHHHhcCccc---------------cc-hHHHHHHHHHHHHHHHHHHhcccccch-------hcc
Confidence 4899999999999999999976311 12 678899999999999999998543210 000
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
.. . ..-+.-.-+.|||.+||..++.| |+++|++.+
T Consensus 120 -~~-----d-~~~~~ft~ditPliLAAh~NnyE-il~~Ll~kg 154 (822)
T KOG3609|consen 120 -SG-----D-ANSPHFTPDITPLMLAAHLNNFE-ILQCLLTRG 154 (822)
T ss_pred -cc-----c-cCcccCCCCccHHHHHHHhcchH-HHHHHHHcC
Confidence 00 0 01122345799999999999999 999998644
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.011 Score=68.31 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=53.0
Q ss_pred cCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 673 GSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 673 s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
+.+|.+.+.+.+.---|+|||||..++.+ +|..||+.+ +|-..+|..|.||..++. |.++=...+.+
T Consensus 416 sgnf~~~pe~~~~ltsT~LH~aa~qg~~k-~v~~~Leeg------~Dp~~kd~~Grtpy~ls~---nkdVk~~F~a~ 482 (591)
T KOG2505|consen 416 SGNFDVTPEANDYLTSTFLHYAAAQGARK-CVKYFLEEG------CDPSTKDGAGRTPYSLSA---NKDVKSIFIAR 482 (591)
T ss_pred cccccccccccccccchHHHHHHhcchHH-HHHHHHHhc------CCchhcccCCCCcccccc---cHHHHHHHHHH
Confidence 34566777788888899999999998777 888887753 677899999999999987 66666655543
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.015 Score=38.18 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=24.2
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCC
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPD 655 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gad 655 (865)
|.|+||+|+..++.+++++||++|.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 67999999999999999999999865
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.02 Score=66.33 Aligned_cols=68 Identities=26% Similarity=0.333 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCC
Q 002922 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKP 680 (865)
Q Consensus 601 ~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~ 680 (865)
.+.++.|.+++..+|..+ .|+..+.+--|+||+|+..|..++|..||+.|. ||
T Consensus 404 p~~ie~lken~lsgnf~~---~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~------------------------Dp 456 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDV---TPEANDYLTSTFLHYAAAQGARKCVKYFLEEGC------------------------DP 456 (591)
T ss_pred hhHHHHHHhcCCcccccc---cccccccccchHHHHHHhcchHHHHHHHHHhcC------------------------Cc
Confidence 566778888888887753 455566667799999999999999999999974 46
Q ss_pred cccCCCCchHHHHHH
Q 002922 681 NVIGPAGLTPLHVAA 695 (865)
Q Consensus 681 Na~d~~G~TPLHlAA 695 (865)
-++|..|+||-.+++
T Consensus 457 ~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 457 STKDGAGRTPYSLSA 471 (591)
T ss_pred hhcccCCCCcccccc
Confidence 789999999999988
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.088 Score=59.53 Aligned_cols=59 Identities=17% Similarity=-0.000 Sum_probs=50.0
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV 657 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~ 657 (865)
--|..||+.|..+.|+.|++.+. || +.+|.-...||.+|.--||.++|++||++||-+.
T Consensus 38 ~elceacR~GD~d~v~~LVetgv--nV-------N~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGV--NV-------NAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCC--Cc-------chhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 45789999999999999998763 23 3556778899999999999999999999998654
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.2 Score=56.89 Aligned_cols=77 Identities=21% Similarity=0.262 Sum_probs=60.1
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC
Q 002922 631 MGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 631 ~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
..-|..|++.|..+.|+.|++.|.| ||++|.-...||-+|..-|+ |++|++|++.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn------------------------VN~vD~fD~spL~lAsLcGH-e~vvklLLen 91 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN------------------------VNAVDRFDSSPLYLASLCGH-EDVVKLLLEN 91 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC------------------------cchhhcccccHHHHHHHcCc-HHHHHHHHHc
Confidence 3568999999999999999999864 68899999999999999865 6699999998
Q ss_pred CCCCCccccccccCCCCCCHHHHHHHcCC
Q 002922 711 PGSVGIEAWKSAQDSTGLTPNDYASLRAH 739 (865)
Q Consensus 711 p~~Ig~gA~VNakD~~G~TPLHyAa~rGn 739 (865)
|+.+ .+|..----=||++.+.+
T Consensus 92 GAiC-------~rdtf~G~RC~YgaLnd~ 113 (516)
T KOG0511|consen 92 GAIC-------SRDTFDGDRCHYGALNDR 113 (516)
T ss_pred CCcc-------cccccCcchhhhhhhhHH
Confidence 7432 345433334478887544
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.11 Score=54.35 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=53.7
Q ss_pred CchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChH
Q 002922 622 TSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 701 (865)
Q Consensus 622 s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e 701 (865)
+++..|..|+|+|+.|+..|+.+.|.+|+.+|+. .|-+.|..|++++.+|=..+. .
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a-----------------------~vgv~d~ssldaaqlaek~g~-~ 59 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVA-----------------------FVGVTDESSLDAAQLAEKGGA-Q 59 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcc-----------------------cccccccccchHHHHHHhcCh-H
Confidence 3445688899999999999999999999999842 467889999999999988754 4
Q ss_pred HHHHHhhc
Q 002922 702 NVLDALTD 709 (865)
Q Consensus 702 ~IVelLL~ 709 (865)
++|..|-+
T Consensus 60 ~fvh~lfe 67 (223)
T KOG2384|consen 60 AFVHSLFE 67 (223)
T ss_pred HHHHHHHH
Confidence 58988855
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.089 Score=34.36 Aligned_cols=22 Identities=50% Similarity=0.682 Sum_probs=11.3
Q ss_pred CchHHHHHHhcCChHHHHHHhhc
Q 002922 687 GLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 687 G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
|.||||+|+..++.+ +++.|++
T Consensus 2 ~~~~l~~~~~~~~~~-~~~~ll~ 23 (30)
T smart00248 2 GRTPLHLAAENGNLE-VVKLLLD 23 (30)
T ss_pred CCCHHHHHHHcCCHH-HHHHHHH
Confidence 455555555554433 5555544
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold | Back alignment and domain information |
|---|
Probab=80.41 E-value=9.7 Score=32.76 Aligned_cols=71 Identities=23% Similarity=0.342 Sum_probs=52.6
Q ss_pred ceeeeeeceeeecCceeEEEEEeccCCCCCceEEEEecCceeEEEe-eccccCCCCcccccCcceeecccCCCCCC-CCc
Q 002922 419 CRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQET-CYDLMGGADTVNENDELQCLSFPCSIPNV-FGR 496 (865)
Q Consensus 419 p~i~~V~P~av~ag~~~~~~v~G~NL~~p~~rlLc~~~GkYl~~e~-~~~~~~g~~~~~~~~~~~~~~f~~~~P~~-~G~ 496 (865)
|.|.+|.|-.-.......+.+.|.||......+-|.+.|..-.... .. ...+. |..|.. .|.
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~~~~~~~v~i~~~~~~~~~~~~-----------~~~i~-----c~~p~~~~~~ 64 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGSNSSNISVKIGGSQCTVITVVS-----------STQIT-----CTSPALPSGN 64 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSESSSTTEEEEETTEEEEEEGEEE-----------TTEEE-----EE--SCSSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecccCCceEEEECCEeeeEEEEEC-----------CcEEE-----EEECCCCCcc
Confidence 6899999988777779999999999998999999999998877652 11 23333 445544 467
Q ss_pred eEEEEecCC
Q 002922 497 GFIEVEDHG 505 (865)
Q Consensus 497 ~fIEVE~~g 505 (865)
.-|+|..+|
T Consensus 65 ~~v~v~~~~ 73 (85)
T PF01833_consen 65 VNVSVTVNG 73 (85)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEECC
Confidence 777777655
|
These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 865 | ||||
| 1ul4_A | 94 | Solution Structure Of The Dna-Binding Domain Of Squ | 3e-15 | ||
| 1wj0_A | 60 | Solution Structure Of The Dna-Binding Domain Of Squ | 3e-10 | ||
| 1ul5_A | 88 | Solution Structure Of The Dna-binding Domain Of Squ | 3e-08 |
| >pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94 | Back alignment and structure |
|
| >pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60 | Back alignment and structure |
|
| >pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94 | Back alignment and structure |
|---|
Score = 90.1 bits (223), Expect = 6e-22
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNGG 60
+H+KA+ + + QRFCQQCSRFH LQEFDE KRSCRRRLAGHN+RRRK+ ++ + G
Sbjct: 35 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESGPSSG 94
|
| >1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88 | Back alignment and structure |
|---|
Score = 89.4 bits (221), Expect = 1e-21
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54
+ A+ ++ +R+CQQC +FH+L +FDEGKRSCRR+L HN RR++ D
Sbjct: 30 RCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVD 83
|
| >1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 5e-14
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFD 31
+HSKAT ALVG +MQRFCQQCSRFHVL+EFD
Sbjct: 30 IHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 8e-12
Identities = 81/483 (16%), Positives = 143/483 (29%), Gaps = 112/483 (23%)
Query: 33 GKRSCRRRLAGH---NKRRRKTHPDNV--VNGGSLNDERSSSYLLISLLRILSNMHSNNS 87
GK + +A + + + + +N + N + +L LL + ++ S
Sbjct: 162 GK-TW---VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 88 DQTKD--------QDLLSHLFRN---------LAGVVGTSNVRNLSGLLQGSQGLLNAGP 130
D + + Q L L ++ L V N + + + LL
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV---QNAKAWNAFNLSCKILLTTRF 274
Query: 131 SNGNVEKVPDLVSTGPEPSRPSTSACMTDNRIGFSEPMRSVGQCGTVPASDLLQKKISTN 190
V D +S + S + + + + LL K +
Sbjct: 275 KQ-----VTDFLS-AATTTHIS----LDHHSMTLTPD----------EVKSLLLKYLDC- 313
Query: 191 DAHSGRVQALSASQSIEMFPSR-SSFSAKANEPEATFGRSKMSNID-LNNVYDDSQERVE 248
R Q L + + P R S + + AT+ K N D L + + S +E
Sbjct: 314 -----RPQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 249 HLELSHA-------PVN-PGPVSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGE 300
E P + P L S +W S N S
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV---IKSDVMVVVNKLHKYS--------- 415
Query: 301 AQSRTDRIVFKLFGKDPNDFPLVLRRQILDWLSHSPTD-------IESYIRPGCIVLTIY 353
L K P + + + L+ + ++ Y P
Sbjct: 416 -----------LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD-- 462
Query: 354 LRLGKPTWEE-LCCDLGSSLRRL-LEGSDDLFWRT----GWLYARVQHSVAFIYNGQVVL 407
L P ++ +G L+ + LF +L +++H +L
Sbjct: 463 -DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 408 DTPLLLKSHKSCRISSIKPI-AVPVSERVKFVVK-GFNLSRST-TRLL-CAI--EGSYLV 461
+T LK +K I P V+ + F+ K NL S T LL A+ E +
Sbjct: 522 NTLQQLKFYKP-YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF 580
Query: 462 QET 464
+E
Sbjct: 581 EEA 583
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 94/629 (14%), Positives = 172/629 (27%), Gaps = 210/629 (33%)
Query: 213 SSFSAKANEPEATFGRSKMSNIDLNNVYDDSQ-------ERVE-HLELSHA--PVNPGP- 261
S + +P ++M + +Y+D+Q R++ +L+L A + P
Sbjct: 96 SPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 262 VSLYSPLWLHPGSNKSSPPQASANSDSTSSQSQSSSSGEAQSRTDRIVFKLFGKDPNDFP 321
V + GS K+ S ++ FK+F
Sbjct: 153 VLIDGV----LGSGKTWVALDVCLSYKV---------------QCKMDFKIF-------- 185
Query: 322 LVLRRQILDWLSHSPTDIESYIRPGCIVLTIYLRLGKPTWEELCCDLGSSLRRLLEGSDD 381
WL+ +++ P ++ + ++L + + + S +
Sbjct: 186 ---------WLN-----LKNCNSPETVLEML---------QKLLYQIDPNWTSRSDHSSN 222
Query: 382 LFWRTGWLYARVQHSVAFIYNGQVVLDTPLLLKSHKSCRISSIKPIAVPVSERV--KFVV 439
+ R + A L L K +++C + V V
Sbjct: 223 IKLRIHSIQAE--------------LRRLLKSKPYENCLL---------VLLNVQNAKAW 259
Query: 440 KGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFI 499
FNLS C I L+ T D ++ +
Sbjct: 260 NAFNLS-------CKI----LL--TTRF-KQVTDFLSAATTTHISL------DHHSMTLT 299
Query: 500 EVEDHGLSSSFVPFIVAE--QEVCSEICMLESAIEAAEISDDFQKIAEKTEVKNQALDFL 557
E L ++ + +EV + S I A I D N +
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII-AESIRDGLATW------DN----WK 348
Query: 558 HEMGWLLHRSHLKFRVGHLHPNFYFFPFKRFKWLLEFSMEHDWCAVVK---KLLGILFDG 614
H L ++ + L P Y K F L F LL +++
Sbjct: 349 HVNCDKLTTI-IESSLNVLEPAEY---RKMFDRLSVF-PPS-----AHIPTILLSLIWFD 398
Query: 615 TVDTGDHTSSELAILEMGLLHK---AVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDR 671
++ + LHK ++ + + P L+ + K +
Sbjct: 399 -------VIKSDVMVVVNKLHKYSLVEKQPKESTISI-----PSIYLE---LKVKLENEY 443
Query: 672 AGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 731
A LH +++D DS L P
Sbjct: 444 A------------------LH--------RSIVDHY----------NIPKTFDSDDLIPP 467
Query: 732 ---DYASLRAHHSYI--HLVQRKINKKSSESGRVILDIPGSIVDWDSKQK----PLKGNK 782
Y +S+I HL + ++ + V LD + +QK N
Sbjct: 468 YLDQYF-----YSHIGHHLKNIEHPERMTLFRMVFLDF-----RF-LEQKIRHDSTAWNA 516
Query: 783 SSRVLS-LQTEKITTKVMQQQCRLCEQKV 810
S +L+ LQ K + E+ V
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLV 545
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 2e-06
Identities = 67/461 (14%), Positives = 111/461 (24%), Gaps = 156/461 (33%)
Query: 432 SERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIP 491
E + ++ + T RL + +E + +N + + P
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSKQ--EEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 492 NVFGRGFIEVED--HGLSSSFVPFIVAEQEVCSEICMLESAIEAAEISDDFQKIAEKTEV 549
++ R +IE D + + F + V+ + L A+ E+
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ---PYLKLRQALL---------------EL 147
Query: 550 KNQALDFLHEMG-----WLLHRSHLKFRVGHLHPNFYFFPFKRFKWL---------LEFS 595
+ + + W+ L ++V FK F WL
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQC------KMDFKIF-WLNLKNCNSPETVLE 200
Query: 596 MEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELL-LNYAP 654
M + D + + S A L LL NC LL L
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR-LLKSKPYENC-----LLVL---- 250
Query: 655 DNVLDK-------PG------SRQKQLVDRAGSGFIFKPNVIG-PAGLT----------- 689
NV + +R KQ+ D + ++ LT
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 690 ----------------PLHV----AACRDDA------------------ENVLDALTDD- 710
P + + RD E+ L+ L
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 711 -----------PGSVGIEA------WKSAQDSTGLTPNDYA------SLRAHHS-----Y 742
P S I W D SL
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIW---FDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 743 IHLVQRKINKKSSESG---RVILD---IPGSIVDWDSKQKP 777
I + ++ K R I+D IP + D D P
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKT-FDSDDLIPP 467
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 60/414 (14%), Positives = 115/414 (27%), Gaps = 137/414 (33%)
Query: 513 FIVAEQEVCSE--ICMLESAI----EAAEISDDFQKIAEKTEVKN--------QALDFLH 558
F E + + + + E A + ++ D + I K E+ + L
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68
Query: 559 EMGWLLHRSH----LKFRVGHLHPNFYFFPFKRFKWLLE-FSMEHDWCAVVKKLLGILFD 613
W L KF L N +K+L+ E ++ ++
Sbjct: 69 ---WTLLSKQEEMVQKFVEEVLRIN--------YKFLMSPIKTEQ----RQPSMMTRMYI 113
Query: 614 GTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAG 673
D L+ + +A NV SR + +
Sbjct: 114 EQRDR---------------LYNDNQV-----------FAKYNV-----SRLQPYLKLRQ 142
Query: 674 SGFIFKPN----VIGPAGL--TPLHVAACRDD--------------------AENVLDAL 707
+ +P + G G T + + C E VL+ L
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 708 TD-----DPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVIL 762
DP W S D + S++A L++ K + ++L
Sbjct: 203 QKLLYQIDPN------WTSRSDHSSNIKLRIHSIQAELR--RLLKSKPYENC----LLVL 250
Query: 763 DIPGSIVD-WDSKQKPLKG-NKSSRVLSLQTEKITTK---VMQQQCRLCEQKVAYRNMRS 817
+ ++K N S ++L +TT+ V ++ +
Sbjct: 251 L------NVQNAKA--WNAFNLSCKIL------LTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 818 SLVYRPVMLSMVAIAAVCVCVAL---LFKSSPEVLYIF------RPFRWELLKY 862
+L + S++ C L + ++P L I W+ K+
Sbjct: 297 TL-TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 31/141 (21%), Positives = 45/141 (31%), Gaps = 19/141 (13%)
Query: 602 AVVKKLLGILFDGTVDTGDHTSSELAILEMGL--LHKAVRRNCRPMVELLLNYAPD-NVL 658
A + LL I D + G LH A+ + V+LL+ D ++
Sbjct: 60 ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR 119
Query: 659 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEA 718
G F G PL +AAC + V+ L ++P A
Sbjct: 120 AC------------GRFFQKHQGTCFYFGELPLSLAACTKQWD-VVTYLLENPHQ---PA 163
Query: 719 WKSAQDSTGLTPNDYASLRAH 739
A DS G T + A
Sbjct: 164 SLEATDSLGNTVLHALVMIAD 184
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 16/109 (14%)
Query: 634 LHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH A+ R +V LL+ A +K K G PL
Sbjct: 105 LHIAIERRNMTLVTLLVENGADVQAAANGDFFKKT-----------KGRPGFYFGELPLS 153
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHS 741
+AAC + ++ L + A SA+DS G T A ++
Sbjct: 154 LAACTNQLA-IVKFLLQNSWQ---PADISARDSVGNTVLHALVEVADNT 198
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 634 LHKAVRRNCRPMVELLLNYAPD-NVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH A+ R C+ VELL+ D + + Q + G PL
Sbjct: 97 LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPK-----------DEGGYFYFGELPLS 145
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHS 741
+AAC + ++ LT++ +A QDS G T A ++
Sbjct: 146 LAACTNQPH-IVHYLTENGHK---QADLRRQDSRGNTVLHALVAIADNT 190
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 18/134 (13%), Positives = 34/134 (25%), Gaps = 22/134 (16%)
Query: 634 LHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHV 693
L+ +VR + + LL ++ + G+ L +
Sbjct: 248 LYLSVRAAMVLLTKELLQKTDVFLI-------QACPYHNGT----TVLPDRVVWLDFVPA 296
Query: 694 AACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH-LVQR--KI 750
AA E VL L +TG +A + + +
Sbjct: 297 AADPSKQE-VLQLLQ----EKL--DEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPV 349
Query: 751 NKKSSESGRVILDI 764
+ S S +
Sbjct: 350 RTR-SRSRARSSAV 362
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 30/130 (23%)
Query: 634 LHKAVRRNCRPMVELLLNYAPD-NVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH AV N + E LL D + D G TPLH
Sbjct: 49 LHLAVITNQPEIAEALLGAGCDPELRDF-------------------------RGNTPLH 83
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI-HLVQR--K 749
+A + + LT + + + A + G T AS+ + + LV
Sbjct: 84 LACEQGCLA-SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD 142
Query: 750 INKKSSESGR 759
+N + +GR
Sbjct: 143 VNAQEPCNGR 152
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 33/110 (30%)
Query: 634 LHKAVRRNCRPMVELLLNYAPD-NVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH A + +V+LLL ++ +
Sbjct: 144 LHAAAWKGYADIVQLLLAKGARTDLRNI-------------------------EKKLAFD 178
Query: 693 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742
+A A +L G +A ++ ++ ++ + L HH +
Sbjct: 179 MATNAACAS-LLKKK------QGTDAVRTLSNAEDYLDDEDSDLEHHHHH 221
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 28/133 (21%)
Query: 634 LHKAVRRNCRPMVELLLNYAPD-NVLDKPG-------SRQ------KQLVDRAGSGFIFK 679
LH+A +R + L+ N LDK G + L + +
Sbjct: 77 LHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI----E 132
Query: 680 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739
N G T LH AA + A+ ++ L + G ++ D A+ A
Sbjct: 133 LNQQNKLGDTALHAAAWKGYAD-IVQLLL----AKGAR--TDLRNIEKKLAFDMATNAAC 185
Query: 740 HSYIHLVQRKINK 752
S L+++K
Sbjct: 186 AS---LLKKKQGT 195
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 30/111 (27%), Positives = 38/111 (34%), Gaps = 28/111 (25%)
Query: 634 LHKAVRRNCRPMVELLLNYAPD-NVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLH 692
LH AV +V LL + GS F ++P+ + G PL
Sbjct: 79 LHIAVINQNVNLVRALLARGASVSARAT------------GSVFHYRPHNLIYYGEHPLS 126
Query: 693 VAACRDDAENV--LDALTDDPGSVGIE--AWKSAQDSTGLTPNDYASLRAH 739
AAC E V L IE A AQDS G T L+ +
Sbjct: 127 FAACVGSEEIVRLL-----------IEHGADIRAQDSLGNTVLHILILQPN 166
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 865 | |||
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.89 | |
| 1ul4_A | 94 | SPL4, squamosa promoter binding protein-like 4; tr | 99.88 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.86 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.86 | |
| 1ul5_A | 88 | SPL7, squamosa promoter binding protein-like 7; tr | 99.86 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 99.86 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.86 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.85 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 99.85 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.85 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.85 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.85 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.85 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.85 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.85 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.85 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.84 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 99.84 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 99.84 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.84 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.84 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.84 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.84 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.84 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.84 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.84 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.84 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.84 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.84 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.84 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.84 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 99.83 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.83 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.83 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.83 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.83 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.83 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 99.83 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.83 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.83 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.83 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.82 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.82 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.82 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 99.82 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.82 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.82 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.82 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 99.82 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.82 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 99.82 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.82 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.82 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.81 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.81 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.81 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.81 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 99.81 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 99.81 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 99.81 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.81 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.81 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.81 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.8 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.8 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.8 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.8 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.8 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 99.8 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.8 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.8 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.79 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.79 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.79 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 99.79 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 99.79 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 99.79 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.79 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.79 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 99.79 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.78 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.78 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.78 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.78 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.78 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.77 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.77 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.77 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.76 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.76 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 99.75 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.75 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.75 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.75 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.74 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.74 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.73 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.72 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.7 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.7 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.7 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.69 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.69 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.69 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.67 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.66 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.64 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.64 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.63 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.62 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.6 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.55 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.49 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.48 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.47 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.45 | |
| 1wj0_A | 60 | Squamosa promoter-binding protein-like 12; DNA-bin | 99.35 |
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=200.40 Aligned_cols=149 Identities=25% Similarity=0.161 Sum_probs=117.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
...|+.|+.+|+.++|+.||+.+++.| ..+..|+||||+|+..++.+++++||++|++++. + |..+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn---------~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh 75 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVN---------ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHH
Confidence 457889999999999999998875433 2356789999999999999999999999988773 2 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++|+.+.. +++++|.+|..|+||||+||..++.+ +|++|++. ||++|.+|.+|+||||+|+.+|
T Consensus 76 ~A~~~g~~~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 76 HAAENGHKEVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKE-VVKLLISK------GADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHcC
Confidence 34445553221 26789999999999999999998766 99999875 4888999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 002922 739 HHSYIHLVQRKINKKS 754 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~ 754 (865)
+.+++++|++++++.+
T Consensus 148 ~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CHHHHHHHHTC-----
T ss_pred CHHHHHHHHHCCCCcC
Confidence 9999999999998866
|
| >1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-24 Score=195.52 Aligned_cols=59 Identities=61% Similarity=1.031 Sum_probs=53.0
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCCCCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNG 59 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~~~~~~ 59 (865)
.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+||||+++++...+
T Consensus 35 ~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RRRk~~~~~~~~~ 93 (94)
T 1ul4_A 35 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93 (94)
T ss_dssp HHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC-----
T ss_pred HHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHhccCCCCcCCCC
Confidence 49999999999999999999999999999999999999999999999999999986543
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=180.04 Aligned_cols=123 Identities=24% Similarity=0.189 Sum_probs=108.8
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 72 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN---------AKDEYGLTPLYLATAHGHLEIVEVLLKNGAD----------- 72 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 34699999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 73 -------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 73 -------------VNAVDAIGFTPLHLAAFIGHLE-IAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp -------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 5778999999999999998776 99999875 478899999999999999999999999999
Q ss_pred HHh
Q 002922 747 QRK 749 (865)
Q Consensus 747 ~~K 749 (865)
+++
T Consensus 133 l~~ 135 (136)
T 2jab_A 133 QKL 135 (136)
T ss_dssp HHC
T ss_pred HHc
Confidence 875
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-22 Score=182.92 Aligned_cols=125 Identities=22% Similarity=0.185 Sum_probs=110.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+. ++.++|++||++|++
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----------- 69 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPN---------ALNRFGRRPIQVMMM-GSAQVAELLLLHGAE----------- 69 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-----------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcC---------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-----------
Confidence 35699999999999999999999875422 235679999999999 999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCC-CchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~-G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|.. |+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++
T Consensus 70 -------------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 70 -------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp -------------SSCCBTTTTBCHHHHHHHHTCHH-HHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 5778888 999999999998776 99999875 47889999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.+|
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9998764
|
| >1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-24 Score=189.79 Aligned_cols=56 Identities=45% Similarity=0.871 Sum_probs=52.7
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNV 56 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~~~ 56 (865)
.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||+.++.+
T Consensus 30 ~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~~~~~ 85 (88)
T 1ul5_A 30 RCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVDKG 85 (88)
T ss_dssp HHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCSSC
T ss_pred HHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCCccCC
Confidence 48999999999999999999999999999999999999999999999998777653
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=196.01 Aligned_cols=166 Identities=23% Similarity=0.126 Sum_probs=111.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC----------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV---------- 657 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~---------- 657 (865)
..++||+|+..|+.+++++||+.+++.+. .+..|+||||+|+..|+.++|++|+++|++..
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---------~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAGVLV---------AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSC---------CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence 46999999999999999999998755332 25679999999999999999999999886521
Q ss_pred -------------------------------------C---CCCch-------hhHHHHhhhcCCcccCCcccCCC-Cch
Q 002922 658 -------------------------------------L---DKPGS-------RQKQLVDRAGSGFIFKPNVIGPA-GLT 689 (865)
Q Consensus 658 -------------------------------------~---dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~-G~T 689 (865)
. .|..+ +..++++.+. .+++++|.++.. |+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t 194 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRT 194 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCC
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcC
Confidence 0 11111 2233333221 125677777754 888
Q ss_pred HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 690 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 690 PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|||+|+.+++.+ +|++|++. ||++|.+|..|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 195 pL~~A~~~~~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~a~ 266 (282)
T 1oy3_D 195 PLHLAVEAQAAS-VLELLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDG-GDKLSPCSSSG 266 (282)
T ss_dssp HHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHHHHcCCHH-HHHHHHHc------CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCC-CcccccccccC
Confidence 888888887665 88888764 477888888888888888888888888888887554 44 67788888776
Q ss_pred Ccccc
Q 002922 767 SIVDW 771 (865)
Q Consensus 767 ~~~~~ 771 (865)
+-.+.
T Consensus 267 ~~~~~ 271 (282)
T 1oy3_D 267 SDSDS 271 (282)
T ss_dssp -----
T ss_pred Ccccc
Confidence 65543
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=181.37 Aligned_cols=124 Identities=21% Similarity=0.145 Sum_probs=95.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
+.++|++|+..|..++++.||+.+.+.+ .+..|.||||+|+..|+.++|++|+++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 59 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------ 59 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 3579999999999999999999875321 245689999999999999999999999865
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.++..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|+
T Consensus 60 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 60 ------------RDARTKVDRTPLHMAASEGHAN-IVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcChHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4566667777777777776655 77777653 3666777777777777777777777777777
Q ss_pred Hhhhh
Q 002922 748 RKINK 752 (865)
Q Consensus 748 ~K~~~ 752 (865)
++..+
T Consensus 121 ~~ga~ 125 (153)
T 1awc_B 121 KYGAD 125 (153)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 76443
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=169.74 Aligned_cols=124 Identities=29% Similarity=0.263 Sum_probs=109.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+..++.+++++|+++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 589999999999999999999875422 2255799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
++.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+..|+.+++++|++
T Consensus 61 -----------~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CcccCCCCCcHHHHHHHcChHH-HHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 5778889999999999998776 99999875 47789999999999999999999999999999
Q ss_pred hhhh
Q 002922 749 KINK 752 (865)
Q Consensus 749 K~~~ 752 (865)
+.++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8764
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-21 Score=193.18 Aligned_cols=165 Identities=22% Similarity=0.149 Sum_probs=128.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.+++++||+.+++.+. .+..+..|+||||+|+..|+.++|++||++|++++. + |..+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEY------LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGG------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccc------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 46999999999999999999998865321 122356799999999999999999999999998773 2 2221
Q ss_pred ------hhHHHHhhhcC----------------------------------------------CcccCCcccCCCCchHH
Q 002922 664 ------RQKQLVDRAGS----------------------------------------------GFIFKPNVIGPAGLTPL 691 (865)
Q Consensus 664 ------~~k~LV~~~s~----------------------------------------------~y~~d~Na~d~~G~TPL 691 (865)
+...+++.... .+.+++|.++..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 23333332211 12345888999999999
Q ss_pred HHHHhcCChHHHHHHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 692 HVAACRDDAENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 692 HlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~-G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+|+..++.+ +|++|++. ++++|.+|.. |+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++-
T Consensus 163 ~~A~~~g~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~ 233 (282)
T 1oy3_D 163 HVAVIHKDAE-MVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM-YGGRTPLGSAL 233 (282)
T ss_dssp HHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc-cCCCCHHHHHH
Confidence 9999998766 99999874 5788999865 99999999999999999999998654 33 56788888764
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-21 Score=196.01 Aligned_cols=163 Identities=18% Similarity=0.096 Sum_probs=126.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGANIN---------QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 4699999999999999999999875432 2255799999999999999999999999998763 2 2221
Q ss_pred ------hhHHHHhhhcCCcc--------------------------cCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 664 ------RQKQLVDRAGSGFI--------------------------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~--------------------------~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
....++......++ ......+..|.||||+||.+++.+ +|++|++.
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~- 221 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE-VLKLLIQA- 221 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH-HHHHHHTT-
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH-HHHHHHHc-
Confidence 22222221100011 122345678999999999998776 99999874
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
++++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. ..|+++|+++..
T Consensus 222 -----g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~~ 274 (299)
T 1s70_B 222 -----RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN-KVGQTAFDVADE 274 (299)
T ss_dssp -----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCTTTSCCS
T ss_pred -----CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHH
Confidence 488999999999999999999999999999998665 34 578899999854
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=200.26 Aligned_cols=161 Identities=19% Similarity=0.086 Sum_probs=95.0
Q ss_pred chHHHHHHHCCCH-HHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 589 KWLLEFSMEHDWC-AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 589 ~tLL~fAverg~~-aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
.++|++|+..+.. .++++|++.+++.|. .+..|+||||+|++.|+.++|++||++|++++. ++..+
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~---------~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l 123 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNV---------TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPL 123 (269)
T ss_dssp ----------------------CCCCTTC---------CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcc
Confidence 3455555544432 344555554432211 133455555555555555555555555554442 11111
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
....+++.+. .+++++|.+|..|+||||+||..++.+ +|++|++. ||++|.+|..|+||||+|+.+
T Consensus 124 ~~a~~~~~~~~~~~Ll-~~g~~~n~~d~~g~TpL~~A~~~g~~~-~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 124 HLACQQGHFQVVKCLL-DSNAKPNKKDLSGNTPLIYACSGGHHE-LVALLLQH------GASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHTTCGG-GHHHHHHT------TCCTTCBCTTSCBHHHHHHHT
T ss_pred ccccccChHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHHC------CCCCCccccCCCcHHHHHHHc
Confidence 1122222111 113468899999999999999998877 99999875 588999999999999999999
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
|+.++|++|+++.++ +. .+|.|+|+++..
T Consensus 196 g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~ 227 (269)
T 4b93_B 196 KHVFVVELLLLHGASVQVLN-KRQRTAVDCAEQ 227 (269)
T ss_dssp TCHHHHHHHHHTTCCSCCCC-TTSCCSGGGSCT
T ss_pred CCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHh
Confidence 999999999998665 44 678999999853
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-21 Score=179.64 Aligned_cols=127 Identities=24% Similarity=0.149 Sum_probs=108.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+. .+..|.||||+|+..|+.++|++||++|++
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 94 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLEWGADPHI---------LAKERESALSLASTGGYTDIVGLLLERDVD------------ 94 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCchh---------hcccCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 45889999999999999999988754322 245688999999999999999999988754
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. +++++.+|..|+||||+|+.+|+.+++++|.
T Consensus 95 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 95 ------------INIYDWNGGTPLLYAVRGNHVK-CVEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 6788999999999999998776 99999875 4788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002922 748 RKINKKS 754 (865)
Q Consensus 748 ~K~~~~~ 754 (865)
++..+..
T Consensus 156 ~~~~~~~ 162 (172)
T 3v30_A 156 NHILKLF 162 (172)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 9977644
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=184.76 Aligned_cols=164 Identities=16% Similarity=0.056 Sum_probs=130.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchH-HhhccccHHHHHHHcCCHHHHHHHHhcC--CCCCC-C--CC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYA--PDNVL-D--KP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~-~~~~G~TpLH~AV~~gn~eIVELLL~~G--adi~~-d--g~ 661 (865)
.+++||+|+..|+.++++.|++.+.+.+++ . .+..|+||||+|+..|+.+++++|+++| ++++. + +.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~ 108 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLD-------DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV 108 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCGG-------GCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccc-------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCC
Confidence 469999999999999999999987554432 2 3567999999999999999999999998 66552 2 32
Q ss_pred ch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 662 GS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 662 ~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
.+ +..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++.+ .+++|.+|.+|+||||+|
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~d~~g~t~L~~A 181 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRAASVGSLK-LIELLCGLG-----KSAVNWQDKQGWTPLFHA 181 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHTTT-----CCCSCCCCTTSCCHHHHH
T ss_pred CHHHHHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhcC-----cccccCcCCCCCCHHHHH
Confidence 22 33444553221 26789999999999999999998776 999998753 278899999999999999
Q ss_pred HHcCCHHHHHHHH-Hhhhh---cCCCCCceEeecCC
Q 002922 735 SLRAHHSYIHLVQ-RKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 735 a~rGn~eiIeLL~-~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.+|+.+++++|+ ++.++ +. .+|.++++++.
T Consensus 182 ~~~~~~~~v~~Ll~~~ga~~~~~~-~~g~t~l~~A~ 216 (228)
T 2dzn_A 182 LAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVAL 216 (228)
T ss_dssp HHTTCHHHHHHHHHHHCCCSCCBC-TTSCBGGGGCS
T ss_pred HHcCCHHHHHHHHHhcCCCCCccC-CCCCcHHHHHH
Confidence 9999999999999 66554 34 57888888874
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=181.50 Aligned_cols=147 Identities=18% Similarity=0.086 Sum_probs=89.1
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS 663 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~ 663 (865)
++.++||+|+.+|..++++.||+.+++.+ ..+..|.||||+|+. |+.++|++||++|++++. + +..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAV 73 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc---------ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 45689999999999999999998764322 235578999999999 999999999999876542 1 1111
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccc-ccccCCCCCCHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-KSAQDSTGLTPNDYAS 735 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~-VNakD~~G~TPLHyAa 735 (865)
+..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++.+ ++ ++.+|..|+||||+|+
T Consensus 74 L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~~g~t~l~~A~ 145 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHT------ASNVGHRNHKGDTACDLAR 145 (162)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHS------CCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcc------CCCCCCcCCCCCcHHHHHH
Confidence 12222221111 13445555555555555555554443 555554432 32 3555555555555555
Q ss_pred HcCCHHHHHHHHHhhh
Q 002922 736 LRAHHSYIHLVQRKIN 751 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~ 751 (865)
.+|+.+++++|+++.+
T Consensus 146 ~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 146 LYGRNEVVSLMQANGA 161 (162)
T ss_dssp HTTCHHHHHHHHHTC-
T ss_pred HcCCHHHHHHHHHhCC
Confidence 5555555555555543
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=185.95 Aligned_cols=145 Identities=21% Similarity=0.088 Sum_probs=100.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.++++.||+.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLE---------DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccc---------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 4589999999999999999999875422 2255699999999999999999999999987652 1 2211
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.+.. +++++|.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+.+
T Consensus 106 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSE-IVKKLLEL------GADISARDLTGLTAEASARIF 177 (192)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHh
Confidence 22333332211 24566667777777777777666554 67766553 356667777777777777777
Q ss_pred CCHHHHHHHHHh
Q 002922 738 AHHSYIHLVQRK 749 (865)
Q Consensus 738 Gn~eiIeLL~~K 749 (865)
|+.+++++|.++
T Consensus 178 ~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 178 GRQEVIKIFTEV 189 (192)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHhc
Confidence 777777766654
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=181.43 Aligned_cols=123 Identities=24% Similarity=0.213 Sum_probs=87.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++|++|+..|..++++.||+.+++.+ ..+..|.||||+|+..|+.++|++||++|+++
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------ 73 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVN---------AEDASGWTPLHLAAFNGHLEIVEVLLKNGADV------------ 73 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------
Confidence 589999999999999999999875422 23567999999999999999999999998764
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 74 ------------~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 74 ------------NAVDHAGMTPLRLAALFGHLE-IVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp ------------TCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------CccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 445555666666666555444 55655543 24555556666666666666666666665555
Q ss_pred hhh
Q 002922 749 KIN 751 (865)
Q Consensus 749 K~~ 751 (865)
+..
T Consensus 135 ~g~ 137 (169)
T 2y1l_E 135 NGA 137 (169)
T ss_dssp TTC
T ss_pred cCC
Confidence 533
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-21 Score=178.89 Aligned_cols=138 Identities=24% Similarity=0.200 Sum_probs=116.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++|+.|+..|..++++.||+... .+....+..|+||||+|+..|+.++|++||++|++
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 67 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQS--------VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------------- 67 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTT--------TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCC--------CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-------------
Confidence 489999999999999999997531 12223355689999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 68 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 68 -----------VHAKDKGGLVPLHNACSYGHYE-VAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCcHH-HHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5778899999999999998776 99999875 47889999999999999999999999999998
Q ss_pred hhhh---cCCCCCceEeecCC
Q 002922 749 KINK---KSSESGRVILDIPG 766 (865)
Q Consensus 749 K~~~---~~~~~~~v~l~i~~ 766 (865)
+..+ +. .+|.++|+++.
T Consensus 130 ~ga~~~~~~-~~g~t~l~~a~ 149 (165)
T 3twr_A 130 HGADPTKKN-RDGNTPLDLVK 149 (165)
T ss_dssp TTCCTTCCC-TTSCCTGGGSC
T ss_pred cCCCCcccC-CCCCChhHhHh
Confidence 8554 33 56777777753
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.1e-21 Score=192.21 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=126.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~---dg~~~ 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++++ +++. ++..+
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASADAN---------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 4689999999999999999999875433 235679999999999999999999999987 5442 23222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+...+++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|+||||+|+.
T Consensus 128 L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKN------GANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHHHHHHTCSSHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcChHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 22334442221 26789999999999999999998776 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 737 RAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+|+.+++++|+++.++.. ...|.++++++
T Consensus 200 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 230 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRDITDHMDRLPRDIA 230 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCccccccCCCCHHHHH
Confidence 999999999999866522 14566666664
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=194.33 Aligned_cols=162 Identities=23% Similarity=0.161 Sum_probs=121.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CC---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KP--- 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~--- 661 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+.+|+.++|++||++|++.+. + +.
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l 161 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACVN---------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAV 161 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcch
Confidence 3578888888888888888887764322 2245688999999999999999999999887542 1 10
Q ss_pred ---------------------------------------------------ch----------hhHHHHhhhcCCcccCC
Q 002922 662 ---------------------------------------------------GS----------RQKQLVDRAGSGFIFKP 680 (865)
Q Consensus 662 ---------------------------------------------------~~----------~~k~LV~~~s~~y~~d~ 680 (865)
.+ +..++++.... .++++
T Consensus 162 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~ 240 (351)
T 3utm_A 162 DMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANV 240 (351)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCT
T ss_pred HHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCc
Confidence 00 12334442221 25788
Q ss_pred cccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCC
Q 002922 681 NVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSES 757 (865)
Q Consensus 681 Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~ 757 (865)
|.+|..|+||||+|+.+++.+ ++++|++. |+++|.+|..|+||||+|+.+|+.+++++|+++.++ +. .+
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~-~~ 312 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHND-VMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS-LQ 312 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TT
T ss_pred CCcCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CC
Confidence 999999999999999998776 99999875 478899999999999999999999999999998665 33 46
Q ss_pred CceEeecCCC
Q 002922 758 GRVILDIPGS 767 (865)
Q Consensus 758 ~~v~l~i~~~ 767 (865)
|.++++++..
T Consensus 313 g~tal~~a~~ 322 (351)
T 3utm_A 313 GFTAAQMGNE 322 (351)
T ss_dssp SCCHHHHSCH
T ss_pred CCChhhhhhH
Confidence 7777777644
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-21 Score=180.12 Aligned_cols=150 Identities=15% Similarity=0.054 Sum_probs=117.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|..++++.||+.+.+ ++ ..+..|+||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~--~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENV--IN-------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSC--TT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCC--cC-------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 35899999999999999999988643 22 2355799999999999999999999999988763 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++... .+++++|.+|..|.||||+|+..++.+ ++++|++. +++++.+|.+|+||||+|+.+
T Consensus 74 ~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 74 SLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVK-CVKMLLES------GADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-HCCCCCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHc
Confidence 2334444221 125678889999999999999987766 89999774 477889999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC
Q 002922 738 AHHSYIHLVQRKINKKS 754 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~ 754 (865)
|+.+++++|.++..+..
T Consensus 146 ~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 99999999998876643
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=185.37 Aligned_cols=161 Identities=15% Similarity=0.082 Sum_probs=128.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 110 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPVN---------DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL 110 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCCC---------CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 4689999999999999999999875422 2356799999999999999999999999998763 2 2222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.... .+++++.++..|.||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+
T Consensus 111 ~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGNLK-MVHILLFY------KASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc------CCCccccCCCCCCHHHHHHHC
Confidence 23344442221 25688999999999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
|+.+++++|+++.++.. ..+|.++++++
T Consensus 183 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 212 (231)
T 3aji_A 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVA 212 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHS
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 99999999999866522 14566777665
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5e-21 Score=181.34 Aligned_cols=138 Identities=16% Similarity=0.122 Sum_probs=114.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|..++++.||+.+.. ..+..+..|+||||+|+..|+.++|++||++|++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 61 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD------------- 61 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 3689999999999999999987532 1122356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 62 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 62 -----------PHILAKERESALSLASTGGYTD-IVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------chhhcccCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5778899999999999998776 99999875 47889999999999999999999999999999
Q ss_pred hhhhcC--CCCCceEeecC
Q 002922 749 KINKKS--SESGRVILDIP 765 (865)
Q Consensus 749 K~~~~~--~~~~~v~l~i~ 765 (865)
+..+.. ..+|.++|+++
T Consensus 124 ~ga~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 124 RGADLTTEADSGYTPMDLA 142 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHH
T ss_pred cCCCccccCCCCCCHHHHH
Confidence 865422 03455555554
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-21 Score=177.95 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=85.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+. |+.+++++||+.+++.+ ..+..|.||||+|+++|+.++|++||++|++++. + |..+
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 107 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRGANPD---------LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CccHHHHHHc-CcHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 4689999999 99999999999875432 2255789999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccC-CcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 664 ------RQKQLVDRAGSGFIFK-PNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d-~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+..++++.... ++.+ ++.++..|+||||+|+.+++.+ ++++|++.|
T Consensus 108 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~G 160 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVK-HTASNVGHRNHKGDTACDLARLYGRNE-VVSLMQANG 160 (162)
T ss_dssp HHHHHTTCHHHHHHHHH-HSCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHH-ccCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHHhC
Confidence 33444442211 1334 6899999999999999998766 999998754
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=175.82 Aligned_cols=120 Identities=20% Similarity=0.135 Sum_probs=106.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|+||||+|+..|+.++|++|+++|++
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 92 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRAGVSRD---------ARTKVDRTPLHMAASEGHANIVEVLLKHGAD------------ 92 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcChHHHHHHHHHcCCC------------
Confidence 4589999999999999999998875422 2355799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. |+++|.+|.+|.||||+|+.+|+.+++++|.
T Consensus 93 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 93 ------------VNAKDMLKMTALHWATEHNHQE-VVELLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 6788999999999999998776 99999875 4788999999999999999999999999873
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=177.46 Aligned_cols=123 Identities=21% Similarity=0.160 Sum_probs=81.4
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
|..++||+|+..|..++++.||+. ...+++ ..+..|.||||+ +..|+.++|++|+++|+++
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~-------~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~---------- 61 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVHPD-------ALNRFGKTALQV-MMFGSTAIALELLKQGASP---------- 61 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCCTT-------CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT----------
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcCcc-------ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC----------
Confidence 446899999999999999999987 322332 235568999999 9999999999999998754
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
|.+|..|+||||+|+..++.+ ++++|++. |+++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 62 --------------~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 62 --------------NVQDTSGTSPVHDAARTGFLD-TLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp --------------TCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred --------------CCcCCCCCCHHHHHHHcCcHH-HHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 444555555555555554443 55555442 244555555555555555555555555555
Q ss_pred HHh
Q 002922 747 QRK 749 (865)
Q Consensus 747 ~~K 749 (865)
+++
T Consensus 121 l~~ 123 (156)
T 1bd8_A 121 AAE 123 (156)
T ss_dssp HTT
T ss_pred Hhc
Confidence 544
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=176.59 Aligned_cols=112 Identities=19% Similarity=0.103 Sum_probs=89.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.||+.+++.+. .+..|.||||+|+.+++.++|++|+++|++++. + +..+
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 106 (167)
T 3v31_A 36 GFTPLMWAAAHGQIAVVEFLLQNGADPQL---------LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPL 106 (167)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC---------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHH
Confidence 45899999999999999999998754322 255789999999999999999999999998873 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
+..++++.... ++++++.+|..|+||||+|+..++.+ ++++|++.
T Consensus 107 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~L~~~ 157 (167)
T 3v31_A 107 LYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRS-VQQVIESH 157 (167)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHH
Confidence 34445553322 36789999999999999999998766 99999764
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-21 Score=182.60 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=108.5
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+ +|+.++|++||++|++
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~----------- 69 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPN---------APNSYGRRPIQVMM-MGSARVAELLLLHGAE----------- 69 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-----------
Confidence 45699999999999999999998865422 23567999999995 9999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCch-HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLT-PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~T-PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|..|+| |||+|+..++.+ ++++|++. +|++|.+|..|+||||+|+.+|+.+++++
T Consensus 70 -------------~~~~d~~g~ttpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 70 -------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp -------------CCCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCcCCCCCcHHHHHHHHCCCHH-HHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 6788999999 999999998776 99999874 58899999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.++
T Consensus 130 Ll~~ga~ 136 (156)
T 1bi7_B 130 LRAAAGG 136 (156)
T ss_dssp HSSCC--
T ss_pred HHHcCCC
Confidence 9988665
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=181.07 Aligned_cols=139 Identities=19% Similarity=0.152 Sum_probs=114.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
+.++|+.|+..|+.++++.||+... . +.+..+..|+||||+|+..|+.++|++||++|++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~-~-------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 64 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE-N-------DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------------ 64 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT-S-------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc-c-------cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 3468999999999999999998741 1 1223356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 65 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 65 ------------INVMNRGDDTPLHLAASHGHRD-IVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5778889999999999998766 99999875 4788999999999999999999999999999
Q ss_pred Hhhhh---cCCCCCceEeecCC
Q 002922 748 RKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 748 ~K~~~---~~~~~~~v~l~i~~ 766 (865)
++.++ +. ..|.++|+++.
T Consensus 126 ~~ga~~~~~~-~~g~tpl~~A~ 146 (179)
T 3f6q_A 126 ANGALVSICN-KYGEMPVDKAK 146 (179)
T ss_dssp HTTCCSSBCC-TTSCCGGGGSC
T ss_pred HCCCCcchhc-cCCCCcHHHHH
Confidence 88654 23 45666766663
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-21 Score=191.41 Aligned_cols=151 Identities=21% Similarity=0.120 Sum_probs=113.3
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCC--CCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTG--DHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 662 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~--~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~ 662 (865)
.+++||+|+.. |+.+++++||+.+++.+.... .......+..|+||||+|+..|+.++|++||++|++++.....
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 122 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACG 122 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccc
Confidence 46999999999 999999999999876441100 0001122456999999999999999999999999876521000
Q ss_pred hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH--cCCH
Q 002922 663 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL--RAHH 740 (865)
Q Consensus 663 ~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~--rGn~ 740 (865)
..+..+.+..+..|+||||+|+..++.+ +|++|++.+ ..+|++|.+|.+|+||||+|+. +++.
T Consensus 123 -----------~~~~~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 123 -----------RFFQKHQGTCFYFGELPLSLAACTKQWD-VVTYLLENP---HQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp -----------GGGSCCSSSCCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred -----------ccccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 0011122334445999999999998776 999998721 1358899999999999999999 8888
Q ss_pred H-------HHHHHHHhhhhc
Q 002922 741 S-------YIHLVQRKINKK 753 (865)
Q Consensus 741 e-------iIeLL~~K~~~~ 753 (865)
+ ++++|+++.++.
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCc
Confidence 8 999999987655
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.9e-21 Score=186.73 Aligned_cols=148 Identities=21% Similarity=0.182 Sum_probs=113.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHh-hccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC-----C---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGI-LFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-----L--- 658 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~-ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~-----~--- 658 (865)
.+++||+|+..|..++++.||+. +++ + +..+..|+||||+|+..|+.++|++||++|++.. .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~--~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCE--V-------HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSC--T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCC--c-------ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC
Confidence 36899999999999999999986 433 2 2336679999999999999999999999998642 1
Q ss_pred CCCch-------hhHHHHhhhcCCcccCCcccCC-------------CCchHHHHHHhcCChHHHHHHhhcCCCCCCccc
Q 002922 659 DKPGS-------RQKQLVDRAGSGFIFKPNVIGP-------------AGLTPLHVAACRDDAENVLDALTDDPGSVGIEA 718 (865)
Q Consensus 659 dg~~~-------~~k~LV~~~s~~y~~d~Na~d~-------------~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA 718 (865)
++..+ +..++++.+.. ++++++..+. .|+||||+|+..++.+ ++++|++. ||
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga 145 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE-IVRLLIEH------GA 145 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH-HHHHHHHT------TC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH-HHHHHHHC------CC
Confidence 22221 23344442211 1456666654 7999999999998766 99999874 47
Q ss_pred cccccCCCCCCHHHHHHHcCCHHHH----HHHHHhhhh
Q 002922 719 WKSAQDSTGLTPNDYASLRAHHSYI----HLVQRKINK 752 (865)
Q Consensus 719 ~VNakD~~G~TPLHyAa~rGn~eiI----eLL~~K~~~ 752 (865)
++|.+|.+|+||||+|+.+|+.+++ ++|+++.++
T Consensus 146 ~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 146 DIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 8899999999999999999999988 777776553
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=182.56 Aligned_cols=148 Identities=17% Similarity=0.132 Sum_probs=119.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~---dg~~~ 663 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++|+++++ +.+. ++..+
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADAN---------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcH
Confidence 4699999999999999999999875432 235679999999999999999999999987 4442 22221
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
...++++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.
T Consensus 96 L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKN------GANKDMQNNREETPLFLAAR 167 (223)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCcCHHHHHHH
Confidence 23344443221 35688999999999999999998766 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhh
Q 002922 737 RAHHSYIHLVQRKINK 752 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~ 752 (865)
+|+.+++++|+++.++
T Consensus 168 ~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 168 EGSYETAKVLLDHFAN 183 (223)
T ss_dssp HTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999988665
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=195.38 Aligned_cols=160 Identities=15% Similarity=0.039 Sum_probs=125.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCC-CCCchHHhhccccHHHHHHHcCCHHHHHHHHh-cCCCCCC-C--CCc
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTG-DHTSSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVL-D--KPG 662 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~-~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~-~Gadi~~-d--g~~ 662 (865)
..++||+|+..|+.+++++|++.+++.++... .......+..|.||||+|+++|+.++|++||+ .|++++. + +..
T Consensus 125 g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t 204 (337)
T 4g8k_A 125 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 204 (337)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCc
Confidence 45899999999999999999999876554211 11222345669999999999999999999995 6888773 2 221
Q ss_pred h-----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHH
Q 002922 663 S-----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 731 (865)
Q Consensus 663 ~-----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPL 731 (865)
+ ....+++.+. .+++++|.+|..|+||||+||..++.+ +++.|+... ++++|.+|.+|+|||
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl-~~gad~n~~d~~g~t~L~~a~~~~~~~-~v~~Ll~~~-----~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGKTAL 277 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCHH-HHHHHHTST-----TCCTTCBCTTSCBHH
T ss_pred HHHHHHHHcCcccHHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhhhhH-HHHHHHHhc-----CCcccCcCCCCCCHH
Confidence 1 2234455322 236789999999999999999998766 888887643 588999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhcC
Q 002922 732 DYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 732 HyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|+|+++|+.++|++|+++.++..
T Consensus 278 ~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 278 LLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999988654
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.5e-21 Score=190.40 Aligned_cols=164 Identities=23% Similarity=0.138 Sum_probs=118.1
Q ss_pred cchHHHHHH---HCCCHHHHHHHHHhhccCCcc--CCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002922 588 FKWLLEFSM---EHDWCAVVKKLLGILFDGTVD--TGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 662 (865)
Q Consensus 588 ~~tLL~fAv---erg~~aVvklLLd~ga~anV~--~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~ 662 (865)
.+++||+|+ ..|+.+++++||+.+++.+.. .-.......+..|+||||+|+.+|+.+||++||++|++++.....
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 125 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc
Confidence 569999999 789999999999998652210 000111122447999999999999999999999999876421000
Q ss_pred hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC---
Q 002922 663 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH--- 739 (865)
Q Consensus 663 ~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn--- 739 (865)
.... ..+.+..+..|+||||+||..++.+ +|++|++.+ ..++++|.+|.+|+||||+|+..|+
T Consensus 126 --------~~~~--~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~ga~~~~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 126 --------RFFQ--PKDEGGYFYFGELPLSLAACTNQPH-IVHYLTENG---HKQADLRRQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp --------CCCS--SSCCCCSCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSSH
T ss_pred --------cccC--cccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCCcccCCCCCcHHHHHHHhccCch
Confidence 0000 0122333468999999999998766 999998721 0468899999999999999999888
Q ss_pred ------HHHHHHHHHhhhhcC---------CCCCceEeecC
Q 002922 740 ------HSYIHLVQRKINKKS---------SESGRVILDIP 765 (865)
Q Consensus 740 ------~eiIeLL~~K~~~~~---------~~~~~v~l~i~ 765 (865)
.+++++|+++.++.. ..+|.++|+++
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 799999999876542 14555666554
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=178.95 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=89.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++++. + |..+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 138 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAEKLLSKGSNVN---------TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPL 138 (192)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4689999999999999999999875422 2356799999999999999999999999998873 2 3322
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
+..++++.+.. ++++++.+|..|+||||+|+..++.+ ++++|++
T Consensus 139 ~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~-~v~~Ll~ 188 (192)
T 2rfm_A 139 IVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQE-VIKIFTE 188 (192)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHH-HHHHHHh
Confidence 34455553322 26789999999999999999998766 9999976
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-20 Score=176.13 Aligned_cols=122 Identities=25% Similarity=0.189 Sum_probs=108.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------ 105 (169)
T 2y1l_E 47 GWTPLHLAAFNGHLEIVEVLLKNGADVN---------AVDHAGMTPLRLAALFGHLEIVEVLLKNGAD------------ 105 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 106 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 106 ------------VNANDMEGHTPLHLAAMFGHLE-IVEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 5778899999999999998776 99999875 4788999999999999999999999999998
Q ss_pred Hh
Q 002922 748 RK 749 (865)
Q Consensus 748 ~K 749 (865)
++
T Consensus 167 ~~ 168 (169)
T 2y1l_E 167 KL 168 (169)
T ss_dssp TC
T ss_pred Hc
Confidence 65
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-20 Score=181.68 Aligned_cols=162 Identities=18% Similarity=0.070 Sum_probs=127.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC----CCCC---CC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP----DNVL---DK 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga----di~~---dg 660 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|.||||+|+..++.+++++|+++++ +++. .+
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 116 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGASPM---------ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG 116 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCC
Confidence 4589999999999999999999875432 225678999999999999999999999987 4432 12
Q ss_pred Cch-------hhHHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 661 PGS-------RQKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 661 ~~~-------~~k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
..+ +..++++.... ++++++..+ ..|.||||+|+.+++.+ ++++|++. ++++|.+|..|+||||
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~ 188 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLE-RGADIDAVDIKSGRSPLIHAVENNSLS-MVQLLLQH------GANVNAQMYSGSSALH 188 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCBCTTSCBHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHH-cCCCcccccccCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHH
Confidence 221 33444543221 256788888 78999999999998776 99999875 4788999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 733 YASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|+.+|+.+++++|+++.++ +. .+|+++|+++..
T Consensus 189 ~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~ 225 (241)
T 1k1a_A 189 SASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLMVARS 225 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCTTTTCSS
T ss_pred HHHHcCCHHHHHHHHhcCCCCCCcC-CCCCCHHHHHHh
Confidence 99999999999999998665 33 467777777644
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=188.64 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=110.9
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCC-----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCC
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVL 658 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~-----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~ 658 (865)
...++||+|+.+|+.+++++||+.+++.+....+ .+....+..|+||||+|+.+|+.+||++||+ +|+
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga---- 167 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA---- 167 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----
Confidence 3569999999999999999999988654331000 0000001469999999999999999999999 664
Q ss_pred CCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCccccc-------ccc
Q 002922 659 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWK-------SAQ 723 (865)
Q Consensus 659 dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~--------e~IVelLL~dp~~Ig~gA~V-------Nak 723 (865)
++|.+|..|+||||+|+..++. .+++++|++. ||++ |.+
T Consensus 168 --------------------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~ 221 (260)
T 3jxi_A 168 --------------------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALL 221 (260)
T ss_dssp --------------------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCC
T ss_pred --------------------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh------Ccccccccchhhcc
Confidence 4688999999999999987652 2499999764 4777 789
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 724 DSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 724 D~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|.+|+||||+|+.+|+.+++++|+++..+..
T Consensus 222 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 222 NNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999987654
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=173.48 Aligned_cols=120 Identities=23% Similarity=0.247 Sum_probs=106.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+ +..|+.++++.||+.+++.+ ..+..|.||||+|+.+|+.++|++|+++|++
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 93 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQGASPN---------VQDTSGTSPVHDAARTGFLDTLKVLVEHGAD------------ 93 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 4699999 99999999999999875432 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++.+|.+|.||||+|+.+|+.+++++|+
T Consensus 94 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 94 ------------VNVPDGTGALPIHLAVQEGHTA-VVSFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp ------------SCCCCTTSCCHHHHHHHHTCHH-HHHHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCcHHHHHHHhChHH-HHHHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 6788999999999999998776 99999763 678999999999999999999999999998
Q ss_pred Hh
Q 002922 748 RK 749 (865)
Q Consensus 748 ~K 749 (865)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 76
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=190.28 Aligned_cols=134 Identities=20% Similarity=0.104 Sum_probs=100.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhc-cCCc-cCCCCCchH----------------------------HhhccccHHHHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILF-DGTV-DTGDHTSSE----------------------------LAILEMGLLHKA 637 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga-~anV-~~~~~s~~~----------------------------~~~~G~TpLH~A 637 (865)
..++||+|+..|+.+++++||+.++ +.+. +..+.++.. .+..|+||||+|
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A 190 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLA 190 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 4699999999999999999999885 3222 111222211 011255555555
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcc
Q 002922 638 VRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE 717 (865)
Q Consensus 638 V~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~g 717 (865)
+.+|+.++|++||++|+ ++|.+|..|+||||+|+..++.+ +|++|++. .+
T Consensus 191 ~~~g~~~~v~~Ll~~ga------------------------d~n~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~-----~g 240 (276)
T 4hbd_A 191 VSHGRVDVVKALLACEA------------------------DVNVQDDDGSTALMCACEHGHKE-IAGLLLAV-----PS 240 (276)
T ss_dssp HHTTCHHHHHHHHHTTC------------------------CTTCCCTTSCCHHHHHHHHTCHH-HHHHHHTS-----TT
T ss_pred HHcCCHHHHHHHHhCCC------------------------CCCCCCCCCCCHHHHHHHCCCHH-HHHHHHhc-----CC
Confidence 55555555555555553 57889999999999999998766 99999872 25
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
+++|.+|.+|+||||+|+.+|+.+++++|+++.+
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 8889999999999999999999999999998754
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=176.38 Aligned_cols=123 Identities=24% Similarity=0.175 Sum_probs=107.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 100 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVAELLVKHGAV------------ 100 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCCC---------ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC------------
Confidence 4599999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+. |+.+++++|.
T Consensus 101 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 101 ------------VNVADLWKFTPLHEAAAKGKYE-ICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 5778999999999999998776 99999875 47889999999999999877 8999999998
Q ss_pred Hhhh
Q 002922 748 RKIN 751 (865)
Q Consensus 748 ~K~~ 751 (865)
++.+
T Consensus 161 ~~gA 164 (165)
T 3twr_A 161 GDAA 164 (165)
T ss_dssp TC--
T ss_pred hccc
Confidence 7653
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-20 Score=188.93 Aligned_cols=161 Identities=22% Similarity=0.104 Sum_probs=119.6
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCC-----ccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~an-----V~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d 659 (865)
..++||+|+.. |+.+++++||+.+++.+ ++. .....+..|+||||+|+..|+.++|++||++|++++..
T Consensus 54 g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~---~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 54 GKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA---SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp CCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc---ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 46999999986 99999999999986522 111 11123457999999999999999999999999876521
Q ss_pred CCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002922 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739 (865)
Q Consensus 660 g~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn 739 (865)
.... ... ..+.+..+..|+||||+|+..++.+ +|++|++.+ ..++++|.+|.+|+||||+|+..|+
T Consensus 131 ~~~~-------~~~---~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 131 ANGD-------FFK---KTKGRPGFYFGELPLSLAACTNQLA-IVKFLLQNS---WQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp BCSG-------GGS---SCSSSCCCCSCBSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cccc-------ccc---cccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---cCCCCceeeCCCCCcHHHHHHHccC
Confidence 0000 000 0123445568999999999998776 999998731 0358899999999999999999998
Q ss_pred ---------HHHHHHHHHhhhhcC---------CCCCceEeecC
Q 002922 740 ---------HSYIHLVQRKINKKS---------SESGRVILDIP 765 (865)
Q Consensus 740 ---------~eiIeLL~~K~~~~~---------~~~~~v~l~i~ 765 (865)
.+++++|+++.++.. ...|.++|+++
T Consensus 197 ~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 799999999876642 14555666554
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-20 Score=181.33 Aligned_cols=161 Identities=17% Similarity=0.028 Sum_probs=126.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC--C----CCCc
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--L----DKPG 662 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~--~----dg~~ 662 (865)
+++||+|+..|..++++.||+.+.+.. ...+..|.||||+|+..|+.++|++|+++|++.+ . .+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL--------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC
Confidence 589999999999999999999864321 1135679999999999999999999999994433 2 2222
Q ss_pred h-------hhHHHHh-hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 663 S-------RQKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 663 ~-------~~k~LV~-~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
+ +..++++ +...++..+++.++..|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE-VSQFLIEN------GASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHh-HHHHHHHc------CCCccccCCCCCCHHHHH
Confidence 2 3444555 3333334788999999999999999998766 99999875 478899999999999999
Q ss_pred HHcCCHHHHHHHHHhh-hh---cCCCCCceEeecC
Q 002922 735 SLRAHHSYIHLVQRKI-NK---KSSESGRVILDIP 765 (865)
Q Consensus 735 a~rGn~eiIeLL~~K~-~~---~~~~~~~v~l~i~ 765 (865)
+.+|+.+++++|+++. .+ +. ..|.++|+++
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~~d-~~g~t~L~~A 181 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNWQD-KQGWTPLFHA 181 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCCCC-TTSCCHHHHH
T ss_pred HHcCCHHHHHHHHhcCcccccCcC-CCCCCHHHHH
Confidence 9999999999999876 33 33 5677777775
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.4e-20 Score=181.06 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=116.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|..++++.|++.+++.+. .+..|+||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDT---------CSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCc---------cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 35899999999999999999988754322 245688999999999999999999998887653 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++........+++..+..|+||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~ 154 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD-LVKLLLSK------GSDINIRDNEENICLHWAAFS 154 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCccCCCCCCHHHHHHHC
Confidence 23444443322223567888888888888888887665 88888764 467788888888888888888
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+++++|+++..+ +. ..|.++|+++
T Consensus 155 ~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A 184 (237)
T 3b7b_A 155 GCVDIAEILLAAKCDLHAVN-IHGDSPLHIA 184 (237)
T ss_dssp CCHHHHHHHHTTTCCTTCCC-TTCCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHH
Confidence 888888888877554 22 3566666665
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-20 Score=186.12 Aligned_cols=134 Identities=17% Similarity=0.095 Sum_probs=108.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCC----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLDK 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~dg 660 (865)
..++||+|+.+|+.+++++||+.+++.+..... .+....+..|+||||+|+..|+.++|++||+ +|+
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga------ 163 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA------ 163 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC------
Confidence 569999999999999999999998654331000 0000001129999999999999999999999 765
Q ss_pred CchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHh--cCChHH-------HHHHhhcCCCCCCccccc-------cccC
Q 002922 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC--RDDAEN-------VLDALTDDPGSVGIEAWK-------SAQD 724 (865)
Q Consensus 661 ~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~--~~~~e~-------IVelLL~dp~~Ig~gA~V-------NakD 724 (865)
++|.+|..|+||||+|+. .++ .+ ++++|++. ||++ |.+|
T Consensus 164 ------------------~~n~~d~~g~TpLh~A~~~~~~~-~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d 218 (256)
T 2etb_A 164 ------------------SLEATDSLGNTVLHALVMIADNS-PENSALVIHMYDGLLQM------GARLCPTVQLEEISN 218 (256)
T ss_dssp ------------------CTTCCCTTSCCHHHHHHHHCCSC-HHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCC
T ss_pred ------------------CcCccCCCCCCHHHHHHHcccCC-chhhHHHHHHHHHHHHc------CCCcccccccccccC
Confidence 468899999999999998 443 44 99999764 5788 9999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
..|+||||+|+.+|+.+++++|+++..+
T Consensus 219 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 219 HQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999999999999999999998765
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=185.18 Aligned_cols=143 Identities=18% Similarity=0.108 Sum_probs=94.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++...
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--------- 106 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPE---------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL--------- 106 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSC---------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSS---------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhH---------
Confidence 4699999999999999999998765432 2356799999999999999999999999875210
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa~rGn~eiIeLL 746 (865)
...++..+..|.||||+|+..++.+ ++++|++. ++++|.+|. .|+||||+|+..|+.+++++|
T Consensus 107 ---------~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 170 (236)
T 1ikn_D 107 ---------HSILKATNYNGHTCLHLASIHGYLG-IVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170 (236)
T ss_dssp ---------SCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ---------HHHhhccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 1123445555666666666655444 56666542 355555655 566666666666666666666
Q ss_pred HHhhhh---cCCCCCceEeecC
Q 002922 747 QRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 747 ~~K~~~---~~~~~~~v~l~i~ 765 (865)
+++.++ +. .+|.++|+++
T Consensus 171 l~~ga~~~~~~-~~g~tpl~~A 191 (236)
T 1ikn_D 171 LKCGADVNRVT-YQGYSPYQLT 191 (236)
T ss_dssp HTTTCCSCCCC-TTCCCGGGGC
T ss_pred HHcCCCCCccc-CCCCCHHHHH
Confidence 655433 22 3455555555
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=176.01 Aligned_cols=147 Identities=15% Similarity=0.087 Sum_probs=112.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHH-hcCCCCCC-C--CCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLL-NYAPDNVL-D--KPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL-~~Gadi~~-d--g~~~ 663 (865)
..++||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..|+.+++++|+ ..+++++. + +..+
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 109 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGADINL---------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNA 109 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcH
Confidence 45899999999999999999998754332 3567899999999999999999999 55555552 2 2221
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC----hHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~----~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
+..++++........++|.+|..|+||||+|+..++ ..+++++|++. ||++|.+|.+|+||||
T Consensus 110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMD 183 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHH
Confidence 233444432221125789999999999999998876 14499999875 4788999999999999
Q ss_pred HHHHcCCHHHHHHHHHh
Q 002922 733 YASLRAHHSYIHLVQRK 749 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K 749 (865)
+|+.+|+.+++++|+++
T Consensus 184 ~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 184 YANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHTCHHHHHHHHTC
T ss_pred HHHHcCCHhHHHHHHhc
Confidence 99999999999998865
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-20 Score=189.30 Aligned_cols=160 Identities=14% Similarity=-0.016 Sum_probs=129.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCch--
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--KPGS-- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d--g~~~-- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++.+ +..+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 162 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVN---------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 162 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSS---------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 4699999999999999999999875432 23567999999999999999999999999987632 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.+. .+++++|.+|..|+||||+|+..++.+ ++++|++. ++++|. |..|.||||+|+.+|
T Consensus 163 ~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 163 EAARRGHVECVNSLI-AYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLES------GADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp HHHHHTCHHHHHHHH-HTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHHT------TCCTTC-CBTTBCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHC------CCCCCC-CCCCCCHHHHHHHcC
Confidence 3344555322 135689999999999999999998776 99999875 467774 899999999999999
Q ss_pred CHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 739 HHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 739 n~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.+++++|+++.++ ++ .+|.++|+++.
T Consensus 234 ~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~ 263 (285)
T 3d9h_A 234 SEELACLLMDFGADTQAKN-AEGKRPVELVP 263 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCC-TTSCCGGGGSC
T ss_pred CHHHHHHHHHCCCCCCCcC-CCCCCHHHHhc
Confidence 99999999998554 44 57888888875
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-20 Score=178.61 Aligned_cols=163 Identities=18% Similarity=0.069 Sum_probs=121.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++||+|+..|..++++.||.... .+++..+..|+||||+|++.|+.++|++||++|++++. + +..+
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTT--------YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYL 77 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTT--------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCC--------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 489999999999999999997642 12223356799999999999999999999999998763 2 2221
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++........+++.++..|.||||+|+..++.+ ++++|++.+ .+++|.+|.+|+||||+|+..|
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID-NVKLLLEDG-----REDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH-HHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH-HHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHhc
Confidence 23344443322235578889999999999999987766 899997743 2678899999999999999888
Q ss_pred C-----HHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 739 H-----HSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 739 n-----~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+ .+++++|+++.++.. ..+|.++|+++
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 185 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYA 185 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 7 889999988765422 03455555543
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=180.05 Aligned_cols=162 Identities=19% Similarity=0.061 Sum_probs=129.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcC-CCCCC-C--CCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA-PDNVL-D--KPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~G-adi~~-d--g~~~ 663 (865)
..++||+|+..|..+++++|++.+++.+ ..+..|.||||+|+..|+.+++++|+++| ++++. + +..+
T Consensus 44 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 114 (237)
T 3b7b_A 44 QRTPLMEAAENNHLEAVKYLIKAGALVD---------PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP 114 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCCC---------CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCH
Confidence 4589999999999999999998875422 22557899999999999999999999998 55542 2 2222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+..++++.... ++++++.++..|.||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.
T Consensus 115 L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLS-KGSDINIRDNEENICLHWAAFSGCVD-IAEILLAA------KCDLHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCHH-HHHHHHTT------TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 33445553221 36789999999999999999998776 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 737 RAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|+.+++++|+++..+ +. .+|.++|+++..
T Consensus 187 ~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~~ 219 (237)
T 3b7b_A 187 ENRYDCVVLFLSRDSDVTLKN-KEGETPLQCASL 219 (237)
T ss_dssp TTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHSCT
T ss_pred hCCHhHHHHHHHcCCCCCccC-CCCCCHHHHHHH
Confidence 9999999999998665 33 467777777643
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=165.94 Aligned_cols=116 Identities=19% Similarity=0.119 Sum_probs=98.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 65 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------ 65 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT---------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+|+..++.+ ++++|++. +++++.+|.+|+||||+|. +.++.++|
T Consensus 66 ------------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 66 ------------INAPDKHHITPLLSAVYEGHVS-CVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred ------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 6788999999999999998776 99999875 4788999999999999994 45555554
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-21 Score=174.74 Aligned_cols=124 Identities=26% Similarity=0.206 Sum_probs=104.5
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 68 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDPN---------VKDHAGWTPLHEACNHGHLKVVELLLQHKAL----------- 68 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-----------
Confidence 45699999999999999999999875432 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+..++.+++++|
T Consensus 69 -------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 69 -------------VNTTGYQNDSPLHDAAKNGHVD-IVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp -------------TTCCCGGGCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred -------------ccCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 5778889999999999998776 99999875 478899999999999999999988888877
Q ss_pred HHhh
Q 002922 747 QRKI 750 (865)
Q Consensus 747 ~~K~ 750 (865)
.+..
T Consensus 129 ~~~~ 132 (137)
T 3c5r_A 129 EKNE 132 (137)
T ss_dssp ----
T ss_pred cccc
Confidence 6653
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-20 Score=187.19 Aligned_cols=135 Identities=16% Similarity=0.073 Sum_probs=109.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCC-----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLD 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~-----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~d 659 (865)
..++||+|+..|+.+++++||+.+++.+....+ ......+..|.||||+|+.+|+.++|++||+ +|+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----- 175 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA----- 175 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC-----
Confidence 569999999999999999999997654331000 0000011259999999999999999999999 765
Q ss_pred CCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCcccccc-------ccC
Q 002922 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWKS-------AQD 724 (865)
Q Consensus 660 g~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~--------e~IVelLL~dp~~Ig~gA~VN-------akD 724 (865)
++|.+|..|+||||+|+..++. .+++++|++. ||++| .+|
T Consensus 176 -------------------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 176 -------------------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL------GAKLHPTLKLEEITN 230 (273)
T ss_dssp -------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCC
T ss_pred -------------------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh------hhhcccccccccccC
Confidence 4688999999999999998762 3499999764 57776 599
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
.+|+||||+|+.+|+.+++++|+++.++
T Consensus 231 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 9999999999999999999999999884
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-20 Score=177.66 Aligned_cols=127 Identities=22% Similarity=0.166 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 97 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGARIN---------VMNRGDDTPLHLAASHGHRDIVQKLLQYKAD------------ 97 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875432 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|.||||+|+..++.+ ++++|++. +|+++.+|..|+||||+|+..++.+++++|.
T Consensus 98 ------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 98 ------------INAVNEHGNVPLHYACFWGQDQ-VAEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred ------------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 5788999999999999998766 99999875 4788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002922 748 RKINKKS 754 (865)
Q Consensus 748 ~K~~~~~ 754 (865)
++..+..
T Consensus 159 ~~g~~~~ 165 (179)
T 3f6q_A 159 KMGQNLN 165 (179)
T ss_dssp HTTCCCS
T ss_pred HhhcCcc
Confidence 9877654
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-20 Score=184.63 Aligned_cols=129 Identities=9% Similarity=-0.036 Sum_probs=108.1
Q ss_pred cchHHHHHHHCCCH----HHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC------HHHHHHHHhcCCCCC
Q 002922 588 FKWLLEFSMEHDWC----AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC------RPMVELLLNYAPDNV 657 (865)
Q Consensus 588 ~~tLL~fAverg~~----aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn------~eIVELLL~~Gadi~ 657 (865)
.+++||+|+.+|+. +++++||+.+++.+. .+..|+||||+|+..++ .+||++||++|+|
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-- 106 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKS---------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-- 106 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC--
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC--
Confidence 46999999999975 599999998865332 35679999999999987 6889999999875
Q ss_pred CCCCchhhHHHHhhhcCCcccCCcccCCCCc-hHHHHHHhcCC----hHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 658 LDKPGSRQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 658 ~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~-TPLHlAA~~~~----~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
+|++|..|+ ||||+|+..+. ..+++++|++. .||++|++|..|+||||
T Consensus 107 ----------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-----~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 107 ----------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-----SGLQLLIKDKWGLTALE 159 (186)
T ss_dssp ----------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-----TTCCTTCCCTTSCCHHH
T ss_pred ----------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-----cCCCCcccCCCCCCHHH
Confidence 688999999 99999998532 23489999861 35899999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhcC
Q 002922 733 YASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K~~~~~ 754 (865)
||+..|+.+++++|..++.+..
T Consensus 160 ~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999998876544
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=192.17 Aligned_cols=130 Identities=14% Similarity=0.094 Sum_probs=114.0
Q ss_pred cchHHHHHHHCC--CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhh
Q 002922 588 FKWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 588 ~~tLL~fAverg--~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~ 665 (865)
..++||+|+..| +.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++..
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------- 200 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPT---------AKDKADETPLMRAMEFRNREALDLMMDTVPSKS-------- 200 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS--------
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc--------
Confidence 469999999999 9999999999975432 235679999999999999999999999997621
Q ss_pred HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
..++|.+|..|+||||+||.+++.+ +|++|++. ||++|.+|.+|+||||+|+.+|+.+++++
T Consensus 201 -----------~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 201 -----------SLRLDYANKQGNSHLHWAILINWED-VAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp -----------SCCTTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHHH
T ss_pred -----------cccccccCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHHH
Confidence 2357899999999999999998766 99999874 58899999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.++
T Consensus 263 Ll~~~~~ 269 (364)
T 3ljn_A 263 LLQKTDV 269 (364)
T ss_dssp HHHHSCH
T ss_pred HHHcCCc
Confidence 9998654
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=186.66 Aligned_cols=162 Identities=19% Similarity=0.126 Sum_probs=124.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++++. + +..+
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPL 128 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4699999999999999999999875432 2356799999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCccc------------------------------------------------------
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVI------------------------------------------------------ 683 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~------------------------------------------------------ 683 (865)
+..++++.+.. ++++++..
T Consensus 129 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ 207 (351)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence 23344442211 13455543
Q ss_pred CCCCchHHHHHHhcCC--hHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCC
Q 002922 684 GPAGLTPLHVAACRDD--AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESG 758 (865)
Q Consensus 684 d~~G~TPLHlAA~~~~--~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~ 758 (865)
+..|.||||+|+..++ ..+++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|+++..+ +. ..|
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d-~~g 280 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRK------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD-SLG 280 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTS
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHc------CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCC
Confidence 3567899999998743 35599999875 478899999999999999999999999999998554 33 567
Q ss_pred ceEeecCC
Q 002922 759 RVILDIPG 766 (865)
Q Consensus 759 ~v~l~i~~ 766 (865)
.++|+++-
T Consensus 281 ~t~L~~A~ 288 (351)
T 3utm_A 281 QTALHRAA 288 (351)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 78888763
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=180.07 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=102.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD-------- 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d-------- 659 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|+||||+|+.+|+.+++++|+++|++.+..
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 142 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADVN---------ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 142 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHH
Confidence 3578888888888888888887764322 22445777777777777777777777777765421
Q ss_pred -----CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh---HHHHHHhhcCCCCCCccccccccC
Q 002922 660 -----KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA---ENVLDALTDDPGSVGIEAWKSAQD 724 (865)
Q Consensus 660 -----g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~---e~IVelLL~dp~~Ig~gA~VNakD 724 (865)
+..+ +..++++.....+++++|.+|..|+||||+|+..++. .+++++|++. ++++|.+|
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~------g~~~~~~~ 216 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH------GADVNVRG 216 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT------TCCSSCCC
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc------CCCCCCcC
Confidence 1111 2334444333334566777777777777777776551 3377777654 36667777
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-hh---hhcCCCCCceEeecC
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQR-KI---NKKSSESGRVILDIP 765 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~-K~---~~~~~~~~~v~l~i~ 765 (865)
.+|+||||+|+.+|+.+++++|++ +. +.+. .+|.++|+++
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~-~~g~t~l~~A 260 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLA 260 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCC-TTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccC-CCCCcHHHHH
Confidence 777777777777777777777776 32 2233 3455555554
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=187.91 Aligned_cols=139 Identities=20% Similarity=0.145 Sum_probs=116.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhh
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~dg~~~~~ 665 (865)
-..|+.|+..|....++.+++.+++.+... .....+..|+||||+|+.. ++.++|++||++|++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---------- 197 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------- 197 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----------
Confidence 368999999999999999999876533210 0112255699999999999 999999999999864
Q ss_pred HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|..|+||||+||..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++
T Consensus 198 --------------in~~d~~g~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 198 --------------LDKQTGKGSTALHYCCLTDNAE-CLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 6788999999999999998776 99999874 58899999999999999999999999999
Q ss_pred HHHhhhhcCCCCCceEee
Q 002922 746 VQRKINKKSSESGRVILD 763 (865)
Q Consensus 746 L~~K~~~~~~~~~~v~l~ 763 (865)
|+++.+++. +.|+.+.
T Consensus 257 Ll~~ga~~~--~~~~~v~ 272 (278)
T 1dcq_A 257 LTQALSGRF--NSHVHVE 272 (278)
T ss_dssp HHHHHTTCC--CSSCCCC
T ss_pred HHHcCCCCC--Ccceeee
Confidence 999988766 5554443
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-20 Score=182.55 Aligned_cols=132 Identities=19% Similarity=0.116 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.|++.+.+.+.. ......+..|.||||+|+.+|+.++|++||++|++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 142 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLH---SILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD------------ 142 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSS---CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHH---HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 469999999999999999999987543221 01122355699999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.++. .|+||||+|+..++.+ +|++|++. ||++|.+|..|+||||+|+.+|+.+++++|
T Consensus 143 ------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L 203 (236)
T 1ikn_D 143 ------------VNAQEPCNGRTALHLAVDLQNPD-LVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQL 203 (236)
T ss_dssp ------------TTCCCTTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred ------------CCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHHHHH
Confidence 567777 8999999999998776 99999874 588999999999999999999999999999
Q ss_pred HHhhhhc
Q 002922 747 QRKINKK 753 (865)
Q Consensus 747 ~~K~~~~ 753 (865)
+++.++.
T Consensus 204 l~~ga~~ 210 (236)
T 1ikn_D 204 GQLTLEN 210 (236)
T ss_dssp HTTSCGG
T ss_pred HHcchhh
Confidence 9987753
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-20 Score=195.79 Aligned_cols=160 Identities=18% Similarity=0.103 Sum_probs=111.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCch----
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGS---- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg~~~---- 663 (865)
.++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.+||++||++|++.+. ++..+
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPT---------IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcc---------ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence 589999999999999999998875432 2355788999999999999999999999986653 33321
Q ss_pred ---h----hHHHHhhhcCCcccCC-----------------cccCCCCchHHHHHHhcC--ChHHHHHHhhcCCCCCCcc
Q 002922 664 ---R----QKQLVDRAGSGFIFKP-----------------NVIGPAGLTPLHVAACRD--DAENVLDALTDDPGSVGIE 717 (865)
Q Consensus 664 ---~----~k~LV~~~s~~y~~d~-----------------Na~d~~G~TPLHlAA~~~--~~e~IVelLL~dp~~Ig~g 717 (865)
+ .+.|++... ..+.++ +.+|..|.||||+|+..+ +.+ +|++|++. +
T Consensus 92 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~-~v~~Ll~~------g 163 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAK-ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLE-MIKILVQL------G 163 (364)
T ss_dssp HHTTCHHHHHHHHHHHH-HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHH-HHHHHHHH------T
T ss_pred HHcCCHHHHHHHHHhcc-ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHH-HHHHHHHc------C
Confidence 1 222222100 001222 337777888888888876 444 88888763 4
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh--------cCCCCCceEeecCC
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK--------KSSESGRVILDIPG 766 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~--------~~~~~~~v~l~i~~ 766 (865)
|++|.+|..|+||||+|+.+|+.+++++|+++..+ +. ..|.++|+++.
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~g~t~L~~A~ 219 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN-KQGNSHLHWAI 219 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC-TTCCCTTHHHH
T ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC-CCCCcHHHHHH
Confidence 67788888888888888888888888888876433 33 46677777663
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=175.06 Aligned_cols=150 Identities=21% Similarity=0.115 Sum_probs=106.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++||+|+..|+.++++.|++.+.. +++ ..+..|.||||+|+..++.+++++|+++|++++. + +..+
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRAT-DLD-------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 130 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTS-CTT-------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-Ccc-------cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHH
Confidence 4677777777777777777765431 111 1234566777777777777777777777766552 2 2211
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.... +++++|.+|..|.||||+|+..++.+ ++++|++. +|+++.+|..|.||||+|+.+|
T Consensus 131 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYE-TAKVLLDH------FANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCcCCCCcCHHHHHHHcCCHH-HHHHHHHc------CCCCccccccCCCHHHHHHHhc
Confidence 22333332211 14578999999999999999998776 99999875 4788999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 002922 739 HHSYIHLVQRKINKKS 754 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~ 754 (865)
+.+++++|.++..++.
T Consensus 203 ~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 203 HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CHHHHHHHHHTTCSSC
T ss_pred chHHHHHHHHcCCCcc
Confidence 9999999999877644
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=155.95 Aligned_cols=92 Identities=32% Similarity=0.332 Sum_probs=82.8
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.|+||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~n~~d~~g~t~L~~A~~~~~~~-~v~~Ll 55 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCCHH-HHHHHH
Confidence 378999999999999999999999864 6788999999999999998776 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
+. ++++|.+|.+|+||||+|+..|+.+++++|+++.+
T Consensus 56 ~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred Hc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 75 57889999999999999999999999999998765
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=176.81 Aligned_cols=148 Identities=18% Similarity=0.076 Sum_probs=121.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+.+++.+++++|+++|++++. + +..+
T Consensus 73 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 143 (231)
T 3aji_A 73 GWSPLHIAASAGXDEIVKALLVKGAHVN---------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 4589999999999999999999875432 2255799999999999999999999999998763 2 2222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|+||||+|+.+
T Consensus 144 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 144 HRAAAKGNLKMVHILLF-YKASTNIQDTEGNTPLHLACDEERVE-EAKFLVTQ------GASIYIENKEEKTPLQVAKGG 215 (231)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHSCHH
T ss_pred HHHHHcCCHHHHHHHHh-cCCCccccCCCCCCHHHHHHHCCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHhh
Confidence 33445553221 36789999999999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 002922 738 AHHSYIHLVQRKINK 752 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~ 752 (865)
++.+++++|+++.++
T Consensus 216 ~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 216 LGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcccccc
Confidence 999999999987653
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=183.99 Aligned_cols=135 Identities=20% Similarity=0.115 Sum_probs=113.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||+|+..|..++++.||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------- 79 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPS---------QPNEEGITALHNAICGANYSIVDFLITAGAN------------- 79 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 489999999999999999999875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHH--HHcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA--SLRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyA--a~rGn~eiIeL 745 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+| .+|+||||+| +..|+.+++++
T Consensus 80 -----------~n~~d~~g~tpLh~A~~~g~~~-~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 80 -----------VNSPDSHGWTPLHCAASCNDTV-ICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 6788999999999999998776 99999875 57889997 5999999999 99999999999
Q ss_pred HHHhhhhcCC--CCCceEee
Q 002922 746 VQRKINKKSS--ESGRVILD 763 (865)
Q Consensus 746 L~~K~~~~~~--~~~~v~l~ 763 (865)
|+++.++... .++.+.+.
T Consensus 142 Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 142 LADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp HHHHHHHTTTSGGGEEEESS
T ss_pred HHHcCCCcccccCCchHHHH
Confidence 9998665320 23445554
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.80 E-value=8e-20 Score=184.06 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=77.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||.|+..|..++++.||+.+++.++ +..|.||||.|+..|+.++|++||++|++
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 62 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYEVDD------------- 62 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 5788899988888889999888754332 23578899999999999999999988754
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+||..++.+ +|++|++. ++++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 63 -----------~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 -----------PSLPNDEGITALHNAVCAGHTE-IVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp -----------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5667777888888888776655 77777653 46777888888888888888888888887777
Q ss_pred hhhhcCC--CCCc-eEeecC
Q 002922 749 KINKKSS--ESGR-VILDIP 765 (865)
Q Consensus 749 K~~~~~~--~~~~-v~l~i~ 765 (865)
+.++... .++. +.|+++
T Consensus 125 ~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 125 SGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TTCCTTCCCSSSCCCHHHHC
T ss_pred cCCCcceecCCCCcchHHHH
Confidence 7554210 2233 666665
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-19 Score=173.38 Aligned_cols=165 Identities=21% Similarity=0.164 Sum_probs=126.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+.+|+.++++.|++.+..... +.+..+..|+||||+|+..|+.++|++|+++|++.+. + +..+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGR-----ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCC-----CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 46999999999999999999985432211 2223356799999999999999999999999998763 2 2221
Q ss_pred ------hhHHHHhhh-cC--CcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHH
Q 002922 664 ------RQKQLVDRA-GS--GFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDY 733 (865)
Q Consensus 664 ------~~k~LV~~~-s~--~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHy 733 (865)
+...+++.. .. ...++++..+..|+||||+|+..++.+ ++++|++. +++++.+| ..|.||||+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE-TVQLLLER------GADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH-HHHHHHHc------CCCcccccccCCCcHHHH
Confidence 222233311 11 112478899999999999999998766 99999875 47789998 889999999
Q ss_pred HHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 734 ASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 734 Aa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A 190 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQM-YSGSSALHSA 190 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBC-TTSCBHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHH
Confidence 9999999999999998554 33 5678888876
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-19 Score=185.69 Aligned_cols=164 Identities=21% Similarity=0.126 Sum_probs=117.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CC--Cch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DK--PGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg--~~~-- 663 (865)
.++||.|+++|+.++|++||+.+++.|.. .+..|+||||+||++|+.+||++||++|++++. +. ..+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~--------~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ--------EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCC--------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCcc--------CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhH
Confidence 58999999999999999999998654321 023589999999999999999999999998773 21 111
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc----cccccccCCCCCCHHHHH
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI----EAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~----gA~VNakD~~G~TPLHyA 734 (865)
....++... ..+..++|.+|..|+||||+|+..++.+ ++++|++.++.+.. ..+.+..|..|.||||+|
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~~~~d~~g~t~l~~A~~~~~~~-~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 98 LAAIAGSVKLLKLF-LSKGADVNECDFYGFTAFMEAAVYGKVK-ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHTCHHHHHHH-HTTTCCTTCBCTTCCBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred HHHhcccchhhHHh-hhccchhhhhccCCCCHHHHHHHcCcHH-HHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 111112211 1225689999999999999999998766 99999876532211 112234566799999999
Q ss_pred HHcCCHHHHHHHHHh-hh---hcCCCCCceEee
Q 002922 735 SLRAHHSYIHLVQRK-IN---KKSSESGRVILD 763 (865)
Q Consensus 735 a~rGn~eiIeLL~~K-~~---~~~~~~~~v~l~ 763 (865)
+.+|+.+++++|+.+ .. .+. ..|.+.++
T Consensus 176 ~~~g~~~~v~~LL~~~gad~n~~d-~~g~t~l~ 207 (337)
T 4g8k_A 176 AEKGHVEVLKILLDEMGADVNACD-NMGRNALI 207 (337)
T ss_dssp HHHTCHHHHHHHHHHSCCCTTCCC-TTSCCHHH
T ss_pred HHCCCHHHHHHHHhccCCCcCccC-CCCCcHHH
Confidence 999999999998864 33 233 45555554
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=174.80 Aligned_cols=111 Identities=23% Similarity=0.132 Sum_probs=95.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+.+|+.++++.||+ +. +++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------- 101 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR--DVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD----------- 101 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS--CTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC--CCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 34699999999999999999998 43 332 2356799999999999999999999999875
Q ss_pred HHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 667 QLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+|.++ ..|+||||+|+..++.+ ++++|++. ||++|.+|.+|+||||+|+..+
T Consensus 102 -------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 102 -------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp -------------TTCCCSSSSCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTSCCHHHHHHHHH
T ss_pred -------------CCcCCCCCCCCHHHHHHhcCcHH-HHHHHHHc------CCCCcCCCCCCCCHHHHHHHhc
Confidence 56677 88999999999998776 99999874 5889999999999999998763
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-20 Score=181.49 Aligned_cols=127 Identities=18% Similarity=0.092 Sum_probs=103.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCchhhH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQK 666 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~dg~~~~~k 666 (865)
..++||+|+.+|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++ |+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~------------ 131 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVN---------GLDKAGSTALYWACHGGHKDIVEMLFTQPNI------------ 131 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC------------
T ss_pred cccccccccccCcHHHHHHHHhCCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC------------
Confidence 3589999999999999999999875422 2356799999999999999999999998 65
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
++|.+|..|+||||+|+..++.+ +|++|++. ||++|.+|.+|+||||+|+..|+.+++++|
T Consensus 132 ------------~~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 132 ------------ELNQQNKLGDTALHAAAWKGYAD-IVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp ------------CCCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred ------------CccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 46889999999999999998776 99999874 588999999999999999999999999988
Q ss_pred HHhhhhcC
Q 002922 747 QRKINKKS 754 (865)
Q Consensus 747 ~~K~~~~~ 754 (865)
..+.+.+.
T Consensus 193 ~~~~~~~~ 200 (222)
T 3ehr_A 193 QGTDAVRT 200 (222)
T ss_dssp --------
T ss_pred hccchhhh
Confidence 88765543
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-19 Score=188.12 Aligned_cols=140 Identities=19% Similarity=0.128 Sum_probs=115.6
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..|+.|+..|..++++.||+.+++.+..... ...+..|+||||+||.. ++.++|++||++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~---~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 218 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPG---PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 218 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEEC---SSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCC---cccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----------
Confidence 5799999999999999999887553321000 01255799999999997 899999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+||..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++|
T Consensus 219 -------------vn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 219 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6788999999999999998776 99999875 588999999999999999999999999999
Q ss_pred HHhhhhcCCCCCceEeecCCC
Q 002922 747 QRKINKKSSESGRVILDIPGS 767 (865)
Q Consensus 747 ~~K~~~~~~~~~~v~l~i~~~ 767 (865)
+++.++ ++.+.|+++..
T Consensus 279 l~~ga~----~g~tpLh~A~~ 295 (301)
T 2b0o_E 279 EQAQAG----TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHH----TTSSCCC----
T ss_pred HHhcCC----CCCChhHHHHh
Confidence 999886 46788888753
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-20 Score=189.38 Aligned_cols=156 Identities=14% Similarity=0.052 Sum_probs=111.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.||+.+++.+. ..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L 99 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNL-----------LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTAL 99 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSC-----------CTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHH
Confidence 45899999999999999999999755322 1489999999999999999999999988763 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCC-chHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHH
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAG-LTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYAS 735 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G-~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa 735 (865)
+..++++.+.. +++++|.++..| .||||+|+..++.+ ++++|++.+ +++ .|. .|+||||+|+
T Consensus 100 ~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~-~v~~Ll~~g------~~~--~~~~~g~t~L~~A~ 169 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVS-IVSYFLSEI------PST--FDLAILLSCIHITI 169 (285)
T ss_dssp HHHHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHH-HHHHHHTTS------CTT--CCCSTHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHH-HHHHHHhCC------Ccc--ccccCCccHHHHHH
Confidence 23334442211 156778888887 68888888877665 888887654 222 333 7888888888
Q ss_pred HcCCHHHHHHHHHhhhh---cCCCCCceE-eecC
Q 002922 736 LRAHHSYIHLVQRKINK---KSSESGRVI-LDIP 765 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~---~~~~~~~v~-l~i~ 765 (865)
.+|+.+++++|+++.++ +. .+|.++ |+++
T Consensus 170 ~~g~~~~v~~Ll~~gad~n~~~-~~g~t~~L~~A 202 (285)
T 3kea_A 170 KNGHVDMMILLLDYMTSTNTNN-SLLFIPDIKLA 202 (285)
T ss_dssp HTTCHHHHHHHHHHHHHTCTTC-CCBCCTTHHHH
T ss_pred HcChHHHHHHHHHcCCCCCccc-CCCCChHHHHH
Confidence 88888888888877554 22 345565 6665
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-19 Score=180.93 Aligned_cols=146 Identities=21% Similarity=0.120 Sum_probs=97.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
+++||+|+..|+.+++++||+.+.. +++ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 162 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRAT-DLD-------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTS-CTT-------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-Ccc-------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4566666666666666666655421 111 1133456666666666666666666666665542 1 2211
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.+.. +++++|.+|..|+||||+|+..++.+ ++++|++. ||+++.+|..|+||||+|+.+|
T Consensus 163 ~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYE-TAKVLLDH------FANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCccccccCCCCHHHHHHHcC
Confidence 22223332111 14568899999999999999998776 99999875 4888999999999999999999
Q ss_pred CHHHHHHHHHhh
Q 002922 739 HHSYIHLVQRKI 750 (865)
Q Consensus 739 n~eiIeLL~~K~ 750 (865)
+.+++++|....
T Consensus 235 ~~~i~~~l~~~~ 246 (253)
T 1yyh_A 235 HHDIVRLLDLEH 246 (253)
T ss_dssp CHHHHHHHHC--
T ss_pred CHHHHHHHHHHh
Confidence 999999998653
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-19 Score=175.41 Aligned_cols=158 Identities=16% Similarity=0.037 Sum_probs=125.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCch---HHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCC-C--C
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSS---ELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~---~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~-d--g 660 (865)
..++||+|+..|+.++++.|++.+++.+.. ..... ..+..|.||||+|+.+|+.++|++|+++ |++++. + +
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 182 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLR--RKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCC--CCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTS
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCCcccc--cccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCC
Confidence 458999999999999999999998654432 11111 1245689999999999999999999987 887763 2 2
Q ss_pred Cch-------h----hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCC
Q 002922 661 PGS-------R----QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLT 729 (865)
Q Consensus 661 ~~~-------~----~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~T 729 (865)
..+ . ...+++.... +++++|.+|..|.||||+|+..++.+ ++++|++. .++++|.+|..|+|
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-----~g~~~~~~~~~g~t 255 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQ-----EHIEINDTDSDGKT 255 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHH-HHHHHHHS-----SSCCTTCCCTTSCC
T ss_pred CCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc-----cCCCccccCCCCCc
Confidence 221 1 1455553322 36789999999999999999998776 99999873 25789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 730 PNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 730 PLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|||+|+.+|+.+++++|+++.++..
T Consensus 256 ~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 256 ALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999999999999999988755
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-19 Score=184.21 Aligned_cols=160 Identities=13% Similarity=-0.017 Sum_probs=125.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|..++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++++. + +..+
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVN---------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSC---------EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 3599999999999999999999875422 2356799999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.+.. ++++++..+ .|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+
T Consensus 130 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~-~g~t~L~~A~~~g~~~-~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~ 200 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQ-HGASVQPES-DLASPIHEAARRGHVE-CVNSLIAY------GGNIDHKISHLGTPLYLACEN 200 (285)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSSCSC-TTSCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHHcCHHHHHHHHHH-CCCCCCCCC-CCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHc
Confidence 33444443221 245666544 5999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC-CCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINKKS-SESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~-~~~~~v~l~i~ 765 (865)
|+.+++++|+++..+.. ...|.++|+++
T Consensus 201 ~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A 229 (285)
T 3d9h_A 201 QQRACVKKLLESGADVNQGKGQDSPLHAV 229 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTBCHHHHH
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCHHHHH
Confidence 99999999998855421 13677777776
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=182.28 Aligned_cols=126 Identities=21% Similarity=0.161 Sum_probs=110.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||+|+.+|+.++++.||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------- 95 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDDPS---------LPNDEGITALHNAVCAGHTEIVKFLVQFGVN------------- 95 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSSCC---------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999998875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCC-CHHHHH--HHcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYA--SLRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~-TPLHyA--a~rGn~eiIeL 745 (865)
+|.+|..|+||||+||..++.+ ++++|++. +|++|.+|..|. ||||+| +.+|+.+++++
T Consensus 96 -----------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 96 -----------VNAADSDGWTPLHCAASCNNVQ-VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 6788999999999999998766 99999875 588999998887 999999 88899999999
Q ss_pred HHHhhhhcC
Q 002922 746 VQRKINKKS 754 (865)
Q Consensus 746 L~~K~~~~~ 754 (865)
|+.+.++..
T Consensus 158 Ll~~~a~~~ 166 (239)
T 1ycs_B 158 LYGVQEKMG 166 (239)
T ss_dssp HHHHHHHTT
T ss_pred HHHhhhccc
Confidence 999877643
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=192.32 Aligned_cols=145 Identities=19% Similarity=0.004 Sum_probs=114.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn---~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+..|+.++|++||+.+++.+ ..+..|+||||+|+.+|+ .++++.||+++.
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n---------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~---------- 191 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY---------- 191 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh----------
Confidence 4689999999999999999998875432 235678999999999988 688888888852
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHh----cCChHHHHHHhhcCCCC---------C-------Cc--------
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC----RDDAENVLDALTDDPGS---------V-------GI-------- 716 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~----~~~~e~IVelLL~dp~~---------I-------g~-------- 716 (865)
.++|.+|..|+||||+|+. .++.+ ++++|++.+.. + |.
T Consensus 192 -------------~~~~~~d~~g~tpLh~A~~~~~~~g~~~-~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~ 257 (327)
T 1sw6_A 192 -------------PCLILEDSMNRTILHHIIITSGMTGCSA-AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 257 (327)
T ss_dssp -------------GGGGEECTTCCCHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHGGGCCEEEC--------------
T ss_pred -------------ccccCCCCCCCCHHHHHHHHccccccHH-HHHHHHHHHHHHHhcccchHHHhhhhcccCCccccccc
Confidence 2478899999999999998 65555 99999763100 0 00
Q ss_pred ---------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 717 ---------------EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 717 ---------------gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 258 g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~ 324 (327)
T 1sw6_A 258 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN-KSGLRPVDFGA 324 (327)
T ss_dssp --CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGGGGTC
T ss_pred CCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHH
Confidence 005899999999999999999999999999998665 34 57889888874
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-19 Score=193.13 Aligned_cols=162 Identities=20% Similarity=0.201 Sum_probs=113.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+. .+..|.||||+|+..|+.+||++|+++|++.+. + +..+
T Consensus 212 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 282 (437)
T 1n11_A 212 GYTPLHIAAKQNQVEVARSLLQYGGSANA---------ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 282 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 35788888888888888888877644222 244577888888888888888888888877652 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+...+++.+.. +++++|.++..|+||||+|+.+++.+ +|++|++. +|++|.+|..|+||||+|+.+
T Consensus 283 ~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQH------QADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHh-CCccCCCCCCCCCCHHHHHHHcCcHH-HHHHHHhc------CCCCCCCCCCCCCHHHHHHHC
Confidence 22333332111 24577888888888888888887766 88888764 477888888888888888888
Q ss_pred CCHHHHHHHHHhhhhcC--CCCCceEeecCC
Q 002922 738 AHHSYIHLVQRKINKKS--SESGRVILDIPG 766 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~--~~~~~v~l~i~~ 766 (865)
|+.+++++|+++.++.. ..+|.++++++.
T Consensus 355 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 355 GHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred ChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 88888888888765422 145677777653
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.9e-19 Score=180.68 Aligned_cols=165 Identities=16% Similarity=0.049 Sum_probs=113.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++|++|+..|+.++++.||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 111 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADIN---------YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLH 111 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTT---------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 589999999999999999999875422 2356799999999999999999999999987652 2 2221
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC-CCCCC--------------------cc
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD-PGSVG--------------------IE 717 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d-p~~Ig--------------------~g 717 (865)
+..++++.+.. ++++++.++..|.||||+|+..++.+ +++.|+.. +..+. ..
T Consensus 112 ~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 112 AAASCGYLDIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEE-LLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHH-HHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 23334442211 14567777777777777777664433 66555431 10000 00
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
......|..|.||||+|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpL~~A 239 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD-YDGWTPLHAA 239 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHHHH
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC-CCCCcHHHHH
Confidence 11123567889999999999999999999887543 33 5778888876
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-19 Score=190.28 Aligned_cols=151 Identities=18% Similarity=0.111 Sum_probs=104.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhcc-CCccCCCCCchHHhhccccHHHHHHHcC---CHHHHHHHHhcCCCCCC-----
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFD-GTVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVL----- 658 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~-anV~~~~~s~~~~~~~G~TpLH~AV~~g---n~eIVELLL~~Gadi~~----- 658 (865)
..++||+|+..|+.+++++||+.+.. .+++ ..+..|.||||+|+..+ +.++|++|+++|++++.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 199 ERSALHQAAANRDFGMMVYMLNSTKLKGDIE-------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCccccChh-------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 45888999999999999888876510 1121 22556889999999887 88899999999887653
Q ss_pred ------CCCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC
Q 002922 659 ------DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS 725 (865)
Q Consensus 659 ------dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~ 725 (865)
.|..+ +..++|+.+....++++|.+|..|+||||+|+.+++.+ +|++|++. ||++|.+|.
T Consensus 272 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~-iv~~Ll~~------gad~~~~d~ 344 (373)
T 2fo1_E 272 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQ------GASVEAVDA 344 (373)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCSSCCCS
T ss_pred cCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccCCCC
Confidence 12211 23344443222223577778888888888888876655 78887664 467778888
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 726 TGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 726 ~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
.|+||||+|+.+|+.+++++|.++.++
T Consensus 345 ~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 345 TDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 888888888888888888887776554
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-20 Score=189.46 Aligned_cols=141 Identities=19% Similarity=0.073 Sum_probs=98.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.++|||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..++.+++++||++|++++. + |..+
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~---------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL 156 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGA---------RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPL 156 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCc---------cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 34677777777777777777776543221 234567777777777777777777777766652 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++|+.+. .+++++|.++..|+||||+||..++.+ +|++|++. |||+|++|.+|+||||||+.+
T Consensus 157 ~~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~A~~~g~~~-~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 157 IYACSGGHHELVALLL-QHGASINASNNKGNTALHEAVIEKHVF-VVELLLLH------GASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHhC
Confidence 2233333221 125678999999999999999998876 99999875 588999999999999999977
Q ss_pred CCHHHHHHHH
Q 002922 738 AHHSYIHLVQ 747 (865)
Q Consensus 738 Gn~eiIeLL~ 747 (865)
|+ ++++|.
T Consensus 229 ~~--i~~lL~ 236 (269)
T 4b93_B 229 SK--IMELLQ 236 (269)
T ss_dssp CH--HHHHTT
T ss_pred Cc--HHHHHH
Confidence 64 555553
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-19 Score=192.00 Aligned_cols=161 Identities=18% Similarity=0.072 Sum_probs=124.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcC---CCCCC---CCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA---PDNVL---DKP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~G---adi~~---dg~ 661 (865)
..++||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..|+.+||++||+++ ++++. +|.
T Consensus 166 g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVAYLMKAGADPTI---------YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCC---------CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CCCHHHHHHHcChHHHHHHHHHCCCCCcc---------cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCC
Confidence 46999999999999999999998755332 2567999999999999999999999987 55552 222
Q ss_pred ch-------h---hHHHHhhhcCCcccCCcc--------cCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc
Q 002922 662 GS-------R---QKQLVDRAGSGFIFKPNV--------IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ 723 (865)
Q Consensus 662 ~~-------~---~k~LV~~~s~~y~~d~Na--------~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNak 723 (865)
.+ + ..++++.+.. +++++|. +|..|+||||+||..++.+ +|++|++.+ ++++|.+
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-~v~~Ll~~~-----~~~~n~~ 309 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVE-KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP-IVKYLVGEK-----GSNKDKQ 309 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHH-HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-HHHHHHHHS-----CCCTTCC
T ss_pred CHHHHHHHhCCcchHHHHHHHHH-CCCCcccccccccCcccccCCCHHHHHHHhCCHH-HHHHHHHhc-----CCCccCc
Confidence 21 1 3444442211 1345554 6789999999999998876 999998643 3789999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 724 DSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 724 D~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++
T Consensus 310 d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~l~~A 353 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD-ATDHTARQLA 353 (373)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-SSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC-CCCCCHHHHH
Confidence 99999999999999999999999998665 33 4566666665
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=180.01 Aligned_cols=124 Identities=22% Similarity=0.149 Sum_probs=106.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+.+|+.++++.||+ ++ +++ ..+..|+||||+|+.+|+.++|++||++|++
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~-------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 102 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DR--DVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------ 102 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TC--CTT-------CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CC--CCC-------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 4699999999999999999998 53 332 2356799999999999999999999999875
Q ss_pred HHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH-----------
Q 002922 668 LVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS----------- 735 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa----------- 735 (865)
+|.++ ..|+||||+|+.+++.+ +|++|++. ||++|.+|..|+||||+|+
T Consensus 103 ------------~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 103 ------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp ------------TTCCCSSSCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred ------------CCcCCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 56677 78999999999998776 99999875 5889999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhh
Q 002922 736 -----LRAHHSYIHLVQRKINK 752 (865)
Q Consensus 736 -----~rGn~eiIeLL~~K~~~ 752 (865)
..|+.+++++|..+..+
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 66889999999987443
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=167.42 Aligned_cols=150 Identities=19% Similarity=0.104 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~~ 664 (865)
..++||+|+.+|+.++++.|++.+++.+ ..+..|.||||+|+..|+.+++++|+++|++++. + +..+.
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 146 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPS---------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPL 146 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHH
Confidence 3589999999999999999998865432 2255688999999999999999999999987763 2 22221
Q ss_pred --------hHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 665 --------QKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 665 --------~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
...+++... .+++++|..+. .|.||||+|+.+++.+ ++++|++. |+++|.+|..|+||||+|+
T Consensus 147 ~~a~~~~~~~~~~~~L~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 147 MWAAYRTHSVDPTRLLL-TFNVSVNLGDKYHKNTALHWAVLAGNTT-VISLLLEA------GANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHHHHCCSSTTHHHHH-HTTCCTTCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCBCTTSCBHHHHHH
T ss_pred HHHHHhCChHHHHHHHH-hcCCCcchhhccCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHH
Confidence 112222111 12567888886 8999999999998766 99999764 4788999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhcC
Q 002922 736 LRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~~~ 754 (865)
.+|+.+++++|.++..++.
T Consensus 219 ~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 219 QRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp HTTCHHHHHHHHHHC----
T ss_pred HcCcHHHHHHHHHhhhccC
Confidence 9999999999998876543
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=9.5e-19 Score=160.48 Aligned_cols=110 Identities=26% Similarity=0.255 Sum_probs=96.1
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|+||||+|+.+|+.++|++||++|++ +|.+|..|+||||+|+..++.+ +++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------PNVKDHAGWTPLHEACNHGHLK-VVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHTTCHH-HHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHHHcCCHH-HHH
Confidence 356799999999999999999999999864 5778999999999999998776 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+|..|+||||+|+..|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 61 ~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~ 118 (137)
T 3c5r_A 61 LLLQH------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN-IFGLRPVDYTDD 118 (137)
T ss_dssp HHHHT------TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCGGGGCCC
T ss_pred HHHHc------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHhh
Confidence 99875 478899999999999999999999999999987554 44 577888888754
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-19 Score=182.90 Aligned_cols=160 Identities=19% Similarity=0.085 Sum_probs=121.5
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC-C--CCch--
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL-D--KPGS-- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~-d--g~~~-- 663 (865)
.++|.|+.+|..+.++.+++.+.+..++ ..|..|+||||+|+..|+.++|++||++|+ +++. + |..+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n-------~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVN-------IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIM 150 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCc-------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHH
Confidence 5667888888899999888776553333 235679999999999999999999999998 6553 2 2211
Q ss_pred ----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002922 664 ----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 733 (865)
Q Consensus 664 ----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHy 733 (865)
...+++.... .++.+++..+..|+||||+||.+++.+ +|++|++. ||++|.+|.+|+||||+
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpLh~A~~~g~~~-~v~~Ll~~------gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLF-RLGNINAKASQAGQTALMLAVSHGRVD-VVKALLAC------EADVNVQDDDGSTALMC 222 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhC------CCCCCCCCCCCCCHHHH
Confidence 2223333211 113467888999999999999998766 99999875 58899999999999999
Q ss_pred HHHcCCHHHHHHHHH-hhhh---cCCCCCceEeecC
Q 002922 734 ASLRAHHSYIHLVQR-KINK---KSSESGRVILDIP 765 (865)
Q Consensus 734 Aa~rGn~eiIeLL~~-K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+|+.+++++|++ +.++ +. .+|.++|+++
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~~A 257 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTD-RDGSTALMVA 257 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCC-TTSCCHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcC-CCCCCHHHHH
Confidence 999999999999998 5443 33 4566666664
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=168.55 Aligned_cols=125 Identities=27% Similarity=0.250 Sum_probs=100.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChH
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 701 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e 701 (865)
+.|+.||++|+.++|++||++|+|++. + |..+ ....++.... .+++++|.+|..|+||||+||..++.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHH
Confidence 579999999999999999999999873 2 3322 2233333211 126789999999999999999998766
Q ss_pred HHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 702 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 702 ~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
+|++|++. ||++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.|+|+++
T Consensus 85 -~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A 143 (169)
T 4gpm_A 85 -VVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD-SDGRTPLDLA 143 (169)
T ss_dssp -HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred -HHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHH
Confidence 99999875 588999999999999999999999999999998654 33 4567777665
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=187.08 Aligned_cols=161 Identities=22% Similarity=0.172 Sum_probs=128.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
..++||+|+..|+.++|+.||+.+++.+. .+..|.||||+|++.|+.++|++|+++|++++. ++..+
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~---------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 84 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNV---------SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 84 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCC---------SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence 35899999999999999999998754332 255789999999999999999999999998763 23222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++|+.+.. +++++|..+..|.||||+|+..++.+ +++.|++.+ ++++.+|..|.||||+|+.+
T Consensus 85 ~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~ 156 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREGHVE-TVLALLEKE------ASQACMTKKGFTPLHVAAKY 156 (437)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC------CCCcCCCCCCCCHHHHHHHc
Confidence 33445553221 25688999999999999999998876 999998753 66788999999999999999
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+.+++++|+++..+ .. .+|.++|+++-
T Consensus 157 g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~ 187 (437)
T 1n11_A 157 GKVRVAELLLERDAHPNAAG-KNGLTPLHVAV 187 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCC-SSCCCHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHH
Confidence 999999999987554 33 46778888763
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=186.97 Aligned_cols=142 Identities=21% Similarity=0.100 Sum_probs=108.9
Q ss_pred chHHHHHHHC-CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 589 KWLLEFSMEH-DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 589 ~tLL~fAver-g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
.++||+|+.. |..++++.||+.+++.+.. + .+..|.||||+|+..|+.++|++||++|++
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------------ 260 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWV----N---GGQDNATPLIQATAANSLLACEFLLQNGAN------------ 260 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----C---TTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCcc----c---cccCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 3799999999 9999999999988654321 1 125689999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++|.
T Consensus 261 ------------vn~~d~~G~TpLh~A~~~g~~~-~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 261 ------------VNQADSAGRGPLHHATILGHTG-LACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCcHH-HHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 6788999999999999998766 99999875 5889999999999999999999999999998
Q ss_pred Hhhhh------cCCCCCceEeecCCCcc
Q 002922 748 RKINK------KSSESGRVILDIPGSIV 769 (865)
Q Consensus 748 ~K~~~------~~~~~~~v~l~i~~~~~ 769 (865)
....+ .+ ..+.+.+++-..+.
T Consensus 322 ~~~~~~~~~~~~~-~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 322 LAKMREAEAAQGQ-AGDETYLDIFRDFS 348 (368)
T ss_dssp HHHC------------------------
T ss_pred HcCCCcccccccC-CCCCCHHHHHHHHH
Confidence 76432 22 35566666655544
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=154.21 Aligned_cols=107 Identities=23% Similarity=0.153 Sum_probs=92.6
Q ss_pred hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 628 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 628 ~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
..|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~L 59 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQLE-ILEFL 59 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC------------------------TTSCCTTSSCHHHHHHHTTCHH-HHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC------------------------cCccCCCCCcHHHHHHHcCCHH-HHHHH
Confidence 3578999999999999999999999864 5778999999999999998776 99999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 708 L~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
++. ++++|.+|.+|+||||+|+.+|+.+++++|+++..+ +. ..|.++|+++.
T Consensus 60 l~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~ 114 (123)
T 3aaa_C 60 LLK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG-PDGLTAFEATD 114 (123)
T ss_dssp HTT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHCC
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHhC
Confidence 874 478999999999999999999999999999998554 33 56778888773
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-19 Score=175.26 Aligned_cols=136 Identities=12% Similarity=0.006 Sum_probs=110.4
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHh-hccccHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCchh
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~-~~G~TpLH~AV~~gn~----eIVELLL~~Gadi~~dg~~~~ 664 (865)
..|+.|+..|..+.++.++..+.+ ..+ ..|+||||+|+.+++. +||++||++|++
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~-----------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--------- 67 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYE-----------DKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--------- 67 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSS-----------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---------
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcc-----------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---------
Confidence 468899999999999999876421 123 6799999999999985 599999999874
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh-----HHHHHHhhcCCCCCCccccccccCCCCC-CHHHHHHHcC
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----ENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYASLRA 738 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~-----e~IVelLL~dp~~Ig~gA~VNakD~~G~-TPLHyAa~rG 738 (865)
||.+|..|+||||+|+..++. .+++++|++. ||++|++|.+|+ ||||||+..|
T Consensus 68 ---------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 68 ---------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp ---------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred ---------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 688999999999999998752 2489999874 589999999999 9999999944
Q ss_pred -----CHHHHHHHHH-hhhh---cCCCCCceEeecCCC
Q 002922 739 -----HHSYIHLVQR-KINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 739 -----n~eiIeLL~~-K~~~---~~~~~~~v~l~i~~~ 767 (865)
+.+++++|+. +.++ +. ..|.++|+++..
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~~~d-~~G~TpL~~A~~ 163 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLLIKD-KWGLTALEFVKR 163 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHT
T ss_pred CChhhHHHHHHHHHHhcCCCCcccC-CCCCCHHHHHHH
Confidence 4568899988 6554 44 578888888644
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-18 Score=179.50 Aligned_cols=148 Identities=16% Similarity=0.053 Sum_probs=118.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--C-Cch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--K-PGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g-~~~ 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++++. + + ..+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~ 132 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDS---------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTS 132 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCH
Confidence 4699999999999999999999875432 2356799999999999999999999999998773 2 2 222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH-HHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYA 734 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP-LHyA 734 (865)
+..++++..... + .+..+. .|+||||+|+..++.+ ++++|++. ||++|.+|..|+|| ||+|
T Consensus 133 L~~A~~~~~~~~v~~Ll~~-g--~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 133 FYHAVMLNDVSIVSYFLSE-I--PSTFDLAILLSCIHITIKNGHVD-MMILLLDY------MTSTNTNNSLLFIPDIKLA 202 (285)
T ss_dssp HHHHHHTTCHHHHHHHHTT-S--CTTCCCSTHHHHHHHHHHTTCHH-HHHHHHHH------HHHTCTTCCCBCCTTHHHH
T ss_pred HHHHHHcCCHHHHHHHHhC-C--CccccccCCccHHHHHHHcChHH-HHHHHHHc------CCCCCcccCCCCChHHHHH
Confidence 344455532211 2 233444 8999999999998776 99999763 68899999999998 9999
Q ss_pred HHcCCHHHHHHHHHhhhhcC
Q 002922 735 SLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 735 a~rGn~eiIeLL~~K~~~~~ 754 (865)
+.+|+.+++++|+++.++..
T Consensus 203 ~~~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 203 IDNKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HHHTCHHHHHHHTTSCBCST
T ss_pred HHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999988765
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=163.39 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=91.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC----CCch-
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD----KPGS- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d----g~~~- 663 (865)
.++|++|+..|..++++.|++.+++.+ ..+..|.||||+|++.|+.++|++|+++|++.+.. +..+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVR---------QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcC---------CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 478999999999999999999875422 22557999999999999999999999999865421 1111
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++... .++++++.++..|.||||+|+..++.+ ++++|++. +++++.+|.+|.||||+|+.+
T Consensus 81 ~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~------~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQFGHTS-IVAYLIAK------GQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCHHH-HHHHHHhc------CCCccccCCCCCcHHHHHHHh
Confidence 1222222111 113455555556666666666555444 55655543 244555566666666666644
Q ss_pred CC-HHHHHHHHHhhh
Q 002922 738 AH-HSYIHLVQRKIN 751 (865)
Q Consensus 738 Gn-~eiIeLL~~K~~ 751 (865)
++ .+++++|.++..
T Consensus 153 ~~~~~~~~~L~~~~~ 167 (240)
T 3eu9_A 153 THSVDPTRLLLTFNV 167 (240)
T ss_dssp CCSSTTHHHHHHTTC
T ss_pred CChHHHHHHHHhcCC
Confidence 44 455555555433
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-18 Score=160.15 Aligned_cols=109 Identities=22% Similarity=0.208 Sum_probs=91.5
Q ss_pred HHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHH
Q 002922 625 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL 704 (865)
Q Consensus 625 ~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IV 704 (865)
..+..|.||||+|+++|+.++|++||++|++ +|.+|..|+||||+|+. ++.+ ++
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~-~~~~-~v 60 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------------PNALNRFGRRPIQVMMM-GSAQ-VA 60 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCTTTTTSTT-SCHH-HH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------------cCCcCCCCCCHHHHHHc-CCHH-HH
Confidence 4466799999999999999999999999864 57789999999999999 7766 99
Q ss_pred HHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 705 DALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 705 elLL~dp~~Ig~gA~VNakD~~-G~TPLHyAa~rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
++|++. ++++|.+|.. |+||||+|+.+|+.+++++|+++..+.. ...|.++|+++
T Consensus 61 ~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 61 ELLLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA 118 (136)
T ss_dssp HHHHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHH
T ss_pred HHHHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 999874 5889999999 9999999999999999999998865422 03455555553
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.72 E-value=9.4e-18 Score=154.34 Aligned_cols=107 Identities=24% Similarity=0.297 Sum_probs=91.3
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
...+.||||+||+.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 65 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VNAKDEYGLTPLYLATAHGHLE-IVEV 65 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHHH
Confidence 34588999999999999999999999864 5778899999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|++. ++++|.+|.+|.||||+|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 66 Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpl~~A 120 (136)
T 2jab_A 66 LLKN------GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQD-KFGKTAFDIS 120 (136)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred HHHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcC-CCCCCHHHHH
Confidence 9875 478899999999999999999999999999998554 23 3566666654
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-17 Score=148.48 Aligned_cols=95 Identities=29% Similarity=0.327 Sum_probs=86.1
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|+||||+|+..|+.+++++||++|++ +|.+|..|+||||+|+..++.+ ++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------VNARSKDGNTPLHLAAKNGHAE-IVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------------SSCCCSSSCCTTHHHHTTTCHH-HHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCcHH-HHHH
Confidence 56799999999999999999999999864 5778899999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
|++. ++++|.+|..|+||||+|+..|+.+++++|+++.++
T Consensus 61 Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 61 LLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp HTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred HHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9764 578899999999999999999999999999998665
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-18 Score=179.78 Aligned_cols=123 Identities=12% Similarity=-0.037 Sum_probs=96.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
.++|.|+..+..+++++|++.+++.+.. .+..|+||||+|+..|+.++|++||++|++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~--------~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-------------- 156 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIP--------VDEHGNTPLHWLTSIANLELVKHLVKHGSN-------------- 156 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSC--------CSTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------------
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccc--------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 4567888888889999998876543320 366799999999999999999999999864
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCC---hHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH----cCCHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDD---AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL----RAHHSY 742 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~---~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~----rGn~ei 742 (865)
+|.+|..|+||||+|+.+++ .+ +++.|++.. .+++|.+|.+|+||||+|+. .|+.++
T Consensus 157 ----------~n~~d~~g~TpLh~A~~~g~~~~~~-~~~~ll~~~-----~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~ 220 (327)
T 1sw6_A 157 ----------RLYGDNMGESCLVKAVKSVNNYDSG-TFEALLDYL-----YPCLILEDSMNRTILHHIIITSGMTGCSAA 220 (327)
T ss_dssp ----------TTBCCTTCCCHHHHHHHSSHHHHTT-CHHHHHHHH-----GGGGGEECTTCCCHHHHHHHHHTSTTCHHH
T ss_pred ----------CCCcCCCCCCHHHHHHHhcccccHH-HHHHHHHhh-----hccccCCCCCCCCHHHHHHHHccccccHHH
Confidence 67899999999999999865 23 455554421 25789999999999999999 899999
Q ss_pred HHHHHHhh
Q 002922 743 IHLVQRKI 750 (865)
Q Consensus 743 IeLL~~K~ 750 (865)
+++|++++
T Consensus 221 v~~Ll~~~ 228 (327)
T 1sw6_A 221 AKYYLDIL 228 (327)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=161.88 Aligned_cols=110 Identities=19% Similarity=0.188 Sum_probs=96.4
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|.||||+|+.+|+.++|++||++|++ +|.+|..|+||||+||..++.+ +|++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG------------------------VNGLDKAGSTALYWACHGGHKD-IVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC------------------------ccccCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45689999999999999999999999864 5778999999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
|++.+ ++++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 125 Ll~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~ 182 (222)
T 3ehr_A 125 LFTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN-IEKKLAFDMATN 182 (222)
T ss_dssp HTTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCC-TTSCCHHHHCCS
T ss_pred HHcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc-CCCCCHHHHhcc
Confidence 98752 588999999999999999999999999999998664 33 578888888765
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-17 Score=165.91 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=96.8
Q ss_pred HHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCccc
Q 002922 604 VKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVI 683 (865)
Q Consensus 604 vklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~ 683 (865)
++.||+.+.+.+.. ...+..+.||||+|+..|+.++|++||++|++ +|.+
T Consensus 1 v~~ll~~~~~~~~~------~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~ 50 (229)
T 2vge_A 1 MRSVLRKAGSPRKA------RRARLNPLVLLLDAALTGELEVVQQAVKEMND------------------------PSQP 50 (229)
T ss_dssp ---------CCCCC------CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC------------------------TTCC
T ss_pred CeehhccCCCCccc------cccccchhHHHHHHHHcCCHHHHHHHHhcCCC------------------------CCCC
Confidence 35677776543321 12245688999999999999999999999864 6788
Q ss_pred CCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC---CCCCce
Q 002922 684 GPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS---SESGRV 760 (865)
Q Consensus 684 d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~---~~~~~v 760 (865)
|..|+||||+||..++.+ +|++|++. |+++|.+|.+|+||||+|+.+|+.+++++|+++.++.. ...|.+
T Consensus 51 d~~g~tpLh~A~~~g~~~-~v~~Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 123 (229)
T 2vge_A 51 NEEGITALHNAICGANYS-IVDFLITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123 (229)
T ss_dssp CTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC
T ss_pred CCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC
Confidence 999999999999998776 99999875 58899999999999999999999999999999866532 137888
Q ss_pred EeecC
Q 002922 761 ILDIP 765 (865)
Q Consensus 761 ~l~i~ 765 (865)
+|+++
T Consensus 124 pL~~A 128 (229)
T 2vge_A 124 AFEKC 128 (229)
T ss_dssp TGGGC
T ss_pred HHHHH
Confidence 88887
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-17 Score=145.11 Aligned_cols=90 Identities=26% Similarity=0.226 Sum_probs=80.8
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.|+||+|+.+|+.++|++||++|++ +|.+|..|+||||+|+..++.+ +++
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------i~~~d~~g~tpLh~A~~~~~~~-~v~ 74 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VAAKDKNGSTPLHLAARNGHLE-VVK 74 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCHH-HHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHH-HHH
Confidence 456799999999999999999999999864 5778999999999999998776 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|++. ++++|.+|..|+||||+|+.+|+.+++++|
T Consensus 75 ~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 75 LLLEA------GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHc------CCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99874 478899999999999999999999999987
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-17 Score=144.23 Aligned_cols=106 Identities=30% Similarity=0.347 Sum_probs=89.2
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.|+||||+|++.|+.++|++|+++|++ ++..+..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHcCcHH-HHHHHH
Confidence 378999999999999999999999864 5678889999999999998776 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+. +++++.+|..|.||||+|+..|+.+++++|+++..+.. ...|.++|+++
T Consensus 56 ~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred Hc------CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 75 47789999999999999999999999999998755421 03455555553
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.5e-17 Score=155.78 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=94.2
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ +++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~v~ 93 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 93 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHH
Confidence 45679999999999999999999999 753 6788999999999999998876 999
Q ss_pred HhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+| .+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 94 ~Ll~~------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~ 152 (183)
T 3deo_A 94 LLAEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED-ERGLTALELARE 152 (183)
T ss_dssp HHHHT------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHH
T ss_pred HHHHc------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCC-CCCCCHHHHHHH
Confidence 99875 47889999 8899999999999999999999998654 34 567788887643
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.66 E-value=4.6e-17 Score=153.08 Aligned_cols=106 Identities=23% Similarity=0.245 Sum_probs=90.2
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+ .++.+ ++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~-~~~~~-~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGSAR-VAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTCHH-HHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHH-cCCHH-HHHH
Confidence 45689999999999999999999999864 5778899999999985 66655 9999
Q ss_pred hhcCCCCCCccccccccCCCCCC-HHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLT-PNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~T-PLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|++. ++++|.+|..|+| |||+|+.+|+.+++++|+++.++ +. ..|.++|+++
T Consensus 63 Ll~~------g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A 118 (156)
T 1bi7_B 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRD-AWGRLPVDLA 118 (156)
T ss_dssp HHTT------TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCC-TTCCCHHHHH
T ss_pred HHHc------CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccC-CCCCCHHHHH
Confidence 9874 5889999999999 99999999999999999998654 33 4566777765
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-16 Score=160.10 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=94.7
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+||..++.+ +|+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~g~~~-~v~ 94 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 94 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------------TTCBCTTSCBHHHHHHHHTCHH-HHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------------CCCcCCCCCCHHHHHHHCCCHH-HHH
Confidence 34568999999999999999999999 754 6788999999999999998876 999
Q ss_pred HhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+| .+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 95 ~Ll~~------ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~ 153 (244)
T 3ui2_A 95 LLAEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED-ERGLTALELARE 153 (244)
T ss_dssp HHHHT------TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHH
T ss_pred HHHHc------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHH
Confidence 99875 58889999 7899999999999999999999998554 34 578888888743
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.8e-16 Score=141.08 Aligned_cols=105 Identities=24% Similarity=0.147 Sum_probs=88.7
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..+++||+|+..|..++++.||+.+++.+ ..+..|.||||+|+..++.++|++||++|++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 67 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVN---------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----------- 67 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSS---------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----------
Confidence 34699999999999999999998875422 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 731 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPL 731 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|.||-
T Consensus 68 -------------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 -------------VNARSKDGNTPEHLAKKNGHHE-IVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp -------------TTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------SSSHHHHSCCCC---
T ss_pred -------------CcccCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCcCCccccccc
Confidence 5778899999999999998766 99999874 588999999999984
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=132.10 Aligned_cols=89 Identities=30% Similarity=0.274 Sum_probs=77.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+.+|+.++|++||++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------- 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999999875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+|.+|..|+||||+|+..++.+ ++++|++.+
T Consensus 61 -----------~~~~d~~g~t~l~~A~~~~~~~-~~~~Ll~~g 91 (93)
T 1n0q_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG 91 (93)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 5788999999999999998766 999998754
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-17 Score=177.61 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=102.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.++++.||+.++.... ....+..|.||||+|+++|+.++|++||++|++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~----------- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI----------- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH-----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-----------
Confidence 4999999999999999999988752111 11224467899999999999999999999997521
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccc--cCCCCCCHHHHHH-HcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSA--QDSTGLTPNDYAS-LRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNa--kD~~G~TPLHyAa-~rGn~eiIeL 745 (865)
..+++..+ +||||+||..|+.+ +|++|++. ||+++. +|..|+||||+|+ .+|+.+++++
T Consensus 156 --------~~~i~~~~---~TpLh~Aa~~G~~e-iv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 --------MAMIQAEN---YHAFRLAAENGHLH-VLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp --------HHHHSHHH---HHHHHHHHHTTCHH-HHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred --------ccccCCCC---CCHHHHHHHCCCHH-HHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 01123333 89999999887766 89988764 466676 8888999999999 8999999998
Q ss_pred HHHhhhhcCCCCCceEeecCC
Q 002922 746 VQRKINKKSSESGRVILDIPG 766 (865)
Q Consensus 746 L~~K~~~~~~~~~~v~l~i~~ 766 (865)
|+++.+ .+.++|+++.
T Consensus 218 Ll~~ga-----~~~taL~~Aa 233 (376)
T 2aja_A 218 LLDCPV-----MLAYAEIHEF 233 (376)
T ss_dssp HTTSHH-----HHHHHHHCTT
T ss_pred HHhCCC-----ccchHHHHHH
Confidence 887653 3556666654
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.4e-16 Score=163.87 Aligned_cols=107 Identities=20% Similarity=0.074 Sum_probs=84.9
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+.. |..+++++||+.+++ ++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 190 g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad--vn-------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad--------- 251 (301)
T 2b0o_E 190 EELVLHLAVKVANQASLPLVDFIIQNGGH--LD-------AKAADGNTALHYAALYNQPDCLKLLLKGRAL--------- 251 (301)
T ss_dssp EECHHHHHHHTCCTTTHHHHHHHHHHSSC--TT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CccHHHHHHHhcccCcHHHHHHHHhcCCC--CC-------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 46999999987 899999999999754 32 2356799999999999999999999999864
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCH
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 740 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ 740 (865)
+|++|..|+||||+|+..++.+ ++++|++. +++ .|.||||+|+..|+.
T Consensus 252 ---------------~~~~d~~G~TpL~~A~~~~~~~-iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 ---------------VGTVNEAGETALDIARKKHHKE-CEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------------CSCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------HHH------TTSSCCC--------
T ss_pred ---------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 6788999999999999998766 99999763 332 689999999998874
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.4e-16 Score=170.76 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=98.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
-.++||+|+.+|+.++|++||+.+++... ....+. +.||||+|+.+|+.+||++||++|++
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~------~~i~~~-~~TpLh~Aa~~G~~eiv~~Ll~~ga~------------ 188 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCELAPTEIM------AMIQAE-NYHAFRLAAENGHLHVLNRLCELAPT------------ 188 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHH------HHHSHH-HHHHHHHHHHTTCHHHHHHHHHSCGG------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCccc------cccCCC-CCCHHHHHHHCCCHHHHHHHHHcCCc------------
Confidence 35799999999999999999998743110 001112 28999999999999999999999864
Q ss_pred HHhhhcCCcccCCcc--cCCCCchHHHHHH-hcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 668 LVDRAGSGFIFKPNV--IGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 668 LV~~~s~~y~~d~Na--~d~~G~TPLHlAA-~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
++. +|..|+||||+|| .+|+.+ +|++|++++ + .|.||||+|+.+|+.++++
T Consensus 189 ------------~~~~~~d~~g~TpL~~Aa~~~G~~e-iv~~Ll~~g------a-------~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 189 ------------EATAMIQAENYYAFRWAAVGRGHHN-VINFLLDCP------V-------MLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp ------------GHHHHHHHHHHHHHHHHHSTTCCHH-HHHHHTTSH------H-------HHHHHHHCTTTTTTTTHHH
T ss_pred ------------cchhccCCCCCCHHHHHHHHCCCHH-HHHHHHhCC------C-------ccchHHHHHHHCCCHHHHH
Confidence 333 6777999999999 988766 999998743 2 2899999999999999999
Q ss_pred HHHHhhhhcC
Q 002922 745 LVQRKINKKS 754 (865)
Q Consensus 745 LL~~K~~~~~ 754 (865)
+|.++.++..
T Consensus 243 lL~~~ga~~~ 252 (376)
T 2aja_A 243 FIARHVNRLK 252 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhcCcccc
Confidence 9999877643
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.9e-14 Score=147.86 Aligned_cols=111 Identities=21% Similarity=0.155 Sum_probs=92.3
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhc---CChHHHHHH
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACR---DDAENVLDA 706 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~---~~~e~IVel 706 (865)
..++||.|+..|+.+.++.|++.|++++. .+.++..|..|+||||+||.. ++.+ ++++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~------------------~~~l~~~~~~g~t~Lh~A~~~~~~~~~~-~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTE------------------KIPLANGHEPDETALHLAVRSVDRTSLH-IVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------BCCCSSCSSTTCBHHHHHHHHCCTTTHH-HHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhh------------------hccccccccCCCCcchHHHHhcccchHH-HHHH
Confidence 45899999999999999999999987531 112567788999999999998 5555 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|++. ||++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.|+|+++.
T Consensus 191 Ll~~------ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~ 246 (278)
T 1dcq_A 191 LVQN------SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAK 246 (278)
T ss_dssp HHHH------CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHC------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc-CCCCCHHHHHH
Confidence 9874 588999999999999999999999999999998665 33 46677777753
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.48 E-value=3.1e-14 Score=155.85 Aligned_cols=106 Identities=23% Similarity=0.219 Sum_probs=92.0
Q ss_pred ccccHHHHHHHc-CCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccC--CCCchHHHHHHhcCChHHHHH
Q 002922 629 LEMGLLHKAVRR-NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIG--PAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 629 ~G~TpLH~AV~~-gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d--~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+.|+||+|+.. ++.++|++||++|++ +|..+ ..|+||||+||..++.+ +|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad------------------------vn~~~~~~~g~TpLh~Aa~~g~~~-iv~ 252 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD------------------------VNWVNGGQDNATPLIQATAANSLL-ACE 252 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC------------------------TTCCCTTTTCCCHHHHHHHTTCHH-HHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC------------------------CCccccccCCCCHHHHHHHCCCHH-HHH
Confidence 467999999999 999999999999875 45555 78999999999998766 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+|++. +|++|.+|.+|+||||+|+..|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 253 ~LL~~------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A~ 309 (368)
T 3jue_A 253 FLLQN------GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARD-SEGRDPLTIAM 309 (368)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHHc------CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcC-CCCCCHHHHHH
Confidence 99875 488999999999999999999999999999998654 33 56788888863
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=123.49 Aligned_cols=86 Identities=19% Similarity=0.097 Sum_probs=75.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~---------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------ 82 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVA---------AKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------ 82 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 5699999999999999999998865422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
+|.+|..|+||||+|+..++.+ ++++|
T Consensus 83 ------------~~~~d~~g~tpl~~A~~~~~~~-~~~~L 109 (110)
T 2zgd_A 83 ------------VXAQDKFGKTAFDISIDNGNED-LAEIL 109 (110)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ------------ccccccCCCcHHHHHHHcCCHH-HHHHh
Confidence 5778999999999999998776 88887
|
| >1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.7e-14 Score=116.61 Aligned_cols=31 Identities=84% Similarity=1.398 Sum_probs=30.1
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCcccc
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFD 31 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd 31 (865)
.|+||++|+++|.++||||||+|||+|+|||
T Consensus 30 ~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 30 IHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp HHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred hHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 4999999999999999999999999999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 865 | ||||
| d1ul4a_ | 81 | g.72.1.1 (A:) Squamosa promoter binding protein-li | 1e-26 | |
| d1ul5a_ | 86 | g.72.1.1 (A:) Squamosa promoter binding protein-li | 1e-25 | |
| d1wj0a_ | 58 | g.72.1.1 (A:) Squamosa-promoter binding-like prote | 4e-14 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 7e-05 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 3e-04 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 8e-04 |
| >d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 4, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 101 bits (254), Expect = 1e-26
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54
+H+KA+ + + QRFCQQCSRFH LQEFDE KRSCRRRLAGHN+RRRK+ +
Sbjct: 28 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 81
|
| >d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 7, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 99.1 bits (247), Expect = 1e-25
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54
+ A+ ++ +R+CQQC +FH+L +FDEGKRSCRR+L HN RR++ D
Sbjct: 28 RCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVD 81
|
| >d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa-promoter binding-like protein 12, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 65.2 bits (159), Expect = 4e-14
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFD 31
+HSKAT ALVG +MQRFCQQCSRFHVL+EFD
Sbjct: 28 IHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 7e-05
Identities = 22/126 (17%), Positives = 37/126 (29%), Gaps = 20/126 (15%)
Query: 634 LHKAVRRNCRPMVELLLNYAPDNV--LDKPGSRQKQLVDRAGSGFIFK------------ 679
L A + ++++LL+ +V D G + +
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211
Query: 680 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739
NV G G TPL +A + ++ L + + DS G T A
Sbjct: 212 VNVRGERGKTPLILAVEKKHLG-LVQRLLEQEH-----IEINDTDSDGKTALLLAVELKL 265
Query: 740 HSYIHL 745
L
Sbjct: 266 KKIAEL 271
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 24/196 (12%)
Query: 576 LHPNFYFFPFKRFKWLLEFSMEHDWCAVVKK--LLGILFDGTVDTGDHTSSELAILEMG- 632
LH + + LL++ + +V L +G + S+ A +G
Sbjct: 202 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 261
Query: 633 -----LLHKAVRRNCRPMVELLLNYAPD---------NVLDKPGSRQKQLVDRAGSGFIF 678
LH + P+ ++L+ + L + +
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA 321
Query: 679 KPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738
N G +PLH AA + + ++ L + A + S G TP A
Sbjct: 322 DVNAKTKLGYSPLHQAAQQGHTD-IVTLL------LKNGASPNEVSSDGTTPLAIAKRLG 374
Query: 739 HHSYIHLVQRKINKKS 754
+ S +++ ++ S
Sbjct: 375 YISVTDVLKVVTDETS 390
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 8e-04
Identities = 26/112 (23%), Positives = 35/112 (31%), Gaps = 31/112 (27%)
Query: 634 LHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHV 693
LH A P+V+ LL PNV TPLH+
Sbjct: 4 LHVASFMGHLPIVKNLLQRGAS------------------------PNVSNVKVETPLHM 39
Query: 694 AACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745
AA E V L + V +A+ TP A+ H + + L
Sbjct: 40 AARAGHTE-VAKYLLQNKAKV------NAKAKDDQTPLHCAARIGHTNMVKL 84
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 865 | |||
| d1ul4a_ | 81 | Squamosa promoter binding protein-like 4, DNA-bind | 99.87 | |
| d1ul5a_ | 86 | Squamosa promoter binding protein-like 7, DNA-bind | 99.87 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.84 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.84 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.84 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.84 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.83 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.82 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.82 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.81 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.81 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.81 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.8 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.8 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.8 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.79 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.76 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.76 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.76 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.76 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.74 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.73 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.72 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.72 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.72 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.7 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.67 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.67 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.66 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.65 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.64 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.63 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.61 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.6 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.58 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.56 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.5 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.47 | |
| d1wj0a_ | 58 | Squamosa-promoter binding-like protein 12, DNA-bin | 99.39 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.37 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.33 | |
| d1qhoa1 | 81 | Five domain "maltogenic" alpha-amylase (glucan 1,4 | 83.74 | |
| d2cxka1 | 82 | Calmodulin binding transcription activator 1 {Huma | 82.15 |
| >d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 4, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=1.7e-24 Score=188.21 Aligned_cols=54 Identities=67% Similarity=1.144 Sum_probs=52.4
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPD 54 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~ 54 (865)
.|+||+.|+|+|+++||||||+|||+|+|||++|||||+||++||.||||+++|
T Consensus 28 ~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~ 81 (81)
T d1ul4a_ 28 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 81 (81)
T ss_dssp HHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred HHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence 399999999999999999999999999999999999999999999999999886
|
| >d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 7, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=1.5e-24 Score=190.23 Aligned_cols=58 Identities=43% Similarity=0.810 Sum_probs=55.2
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCCCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVN 58 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~~~~~ 58 (865)
.|+||+.|+|+|+++||||||+|||+|+|||++|||||+||++||.||||+++++++.
T Consensus 28 ~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~~~g~ 85 (86)
T d1ul5a_ 28 RCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVDKGGV 85 (86)
T ss_dssp HHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCSSCCC
T ss_pred HhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCcccccc
Confidence 4899999999999999999999999999999999999999999999999999987653
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=7.8e-21 Score=187.26 Aligned_cols=150 Identities=23% Similarity=0.130 Sum_probs=103.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD-------- 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d-------- 659 (865)
.+||||+|+.+|..+++++||+.+++.+. .+..|.||||+|+..++.+++++|++.+.....+
T Consensus 45 g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~---------~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 115 (255)
T d1oy3d_ 45 GQTALHLAAILGEASTVEKLYAAGAGVLV---------AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (255)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSC---------CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred CCCccchHHhhcccccccccccccccccc---------cccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhH
Confidence 45899999999999999999998754332 2567889999999999999999988765421100
Q ss_pred ------------------------------------------CCch-------hhHHHHhhhcCCcccCCc-ccCCCCch
Q 002922 660 ------------------------------------------KPGS-------RQKQLVDRAGSGFIFKPN-VIGPAGLT 689 (865)
Q Consensus 660 ------------------------------------------g~~~-------~~k~LV~~~s~~y~~d~N-a~d~~G~T 689 (865)
|..+ +..++++.+.. .+++++ .++..|.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~g~T 194 (255)
T d1oy3d_ 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD-AGADLNKPEPTCGRT 194 (255)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCC
T ss_pred HhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhc-ccccccccccccccc
Confidence 0000 11222221110 022333 34567888
Q ss_pred HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 690 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 690 PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|||+|+..++.+ ++++|++. ||++|.+|.+|.||||+|+.+|+.+++++|++++++++
T Consensus 195 pL~~A~~~~~~~-~v~~Ll~~------gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~~~ 252 (255)
T d1oy3d_ 195 PLHLAVEAQAAS-VLELLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (255)
T ss_dssp HHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred cccccccccHHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 888888887655 88888764 47778888888888888888888888888888888765
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=9.1e-21 Score=186.76 Aligned_cols=165 Identities=21% Similarity=0.146 Sum_probs=123.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
.+++||+|+.+|+.+++++||+.+++... ....+..|.||||+||..|+.++|++||++|++++. +|..+
T Consensus 9 G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~------i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL 82 (255)
T d1oy3d_ 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEY------LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (255)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGG------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccc------ccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence 47999999999999999999998865321 112356799999999999999999999999998763 22211
Q ss_pred ------hhHHHHhh----------------------------------------------hcCCcccCCcccCCCCchHH
Q 002922 664 ------RQKQLVDR----------------------------------------------AGSGFIFKPNVIGPAGLTPL 691 (865)
Q Consensus 664 ------~~k~LV~~----------------------------------------------~s~~y~~d~Na~d~~G~TPL 691 (865)
+..++++. ....+..++|.+|..|.|||
T Consensus 83 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpL 162 (255)
T d1oy3d_ 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (255)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred hhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccc
Confidence 11111110 01112456788999999999
Q ss_pred HHHHhcCChHHHHHHhhcCCCCCCccccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 692 HVAACRDDAENVLDALTDDPGSVGIEAWKSA-QDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 692 HlAA~~~~~e~IVelLL~dp~~Ig~gA~VNa-kD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+||.+++.+ ++++|++.+ ++.+. ++..|.||||+|+..|+.+++++|+++.++ +. ..|.++|+++-
T Consensus 163 h~A~~~~~~~-~v~~Ll~~~------~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d-~~g~t~L~~A~ 233 (255)
T d1oy3d_ 163 HVAVIHKDAE-MVRLLRDAG------ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM-YGGRTPLGSAL 233 (255)
T ss_dssp HHHHHTTCHH-HHHHHHHHT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred cccccccccc-cccchhccc------ccccccccccccccccccccccHHHHHHHHHHCCCCCCCCC-CCCCCHHHHHH
Confidence 9999998877 999998753 44454 567899999999999999999999998443 44 45777777753
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=1.6e-20 Score=172.41 Aligned_cols=141 Identities=18% Similarity=0.021 Sum_probs=112.8
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
+++|+.|+..|+.++|+.||+.+++.+ .+..|.||||+|+..++.++++.++........ . +...
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~----------~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCCcc----------cccCCCccccccccccccccccccccccccccccccccccccc
Confidence 589999999999999999999975422 256799999999999999999999988765432 1 1111
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
.....++... .++++++.+|..|+||||+|+..++.+ +|++|++. ||++|.+|.+|.||||+|+.+|
T Consensus 73 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~g~T~L~~A~~~g~~~-iv~~ll~~------gad~~~~d~~g~Tpl~~A~~~g 144 (153)
T d1awcb_ 73 MAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHNHQE-VVELLIKY------GADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccccccceeeeccc-ccCCccccccccCchHHHhhhhcchhh-eeeecccc------ccCCcccCCCCCCHHHHHHHcC
Confidence 1222333211 235678999999999999999998876 99999874 5889999999999999999999
Q ss_pred CHHHHHHHH
Q 002922 739 HHSYIHLVQ 747 (865)
Q Consensus 739 n~eiIeLL~ 747 (865)
|.+++++|.
T Consensus 145 ~~eiv~lL~ 153 (153)
T d1awcb_ 145 NEDLAEILQ 153 (153)
T ss_dssp CHHHHHHHC
T ss_pred CHHHHHhCc
Confidence 999999873
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.84 E-value=1.3e-21 Score=193.81 Aligned_cols=153 Identities=19% Similarity=0.162 Sum_probs=106.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
-+++||+|+..|+.++|+.||......-+. .|++++.++..|+||||+|+++|+.++|++||++|+|++. + |..+
T Consensus 33 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~-~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l 111 (277)
T d2fo1e1 33 NRTVLHWIASNSSAEKSEDLIVHEAKECIA-AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 111 (277)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHH-TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CccHHHHHHHcCCHHHHHHHHhcchhHHHH-cCCCccccCCCCCeeeccccccccccccccccccccccccccccccccc
Confidence 469999999999999999887653211111 1234445577899999999999999999999999998752 1 1100
Q ss_pred ---------------------------------------------hhH--------------------------------
Q 002922 664 ---------------------------------------------RQK-------------------------------- 666 (865)
Q Consensus 664 ---------------------------------------------~~k-------------------------------- 666 (865)
...
T Consensus 112 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 191 (277)
T d2fo1e1 112 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTAL 191 (277)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTH
T ss_pred cchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcc
Confidence 000
Q ss_pred ---------HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 667 ---------QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 667 ---------~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
.++.......+.+++.+|..|+||||+|+..++.+ +|++|++. |||+|++|.+|+||||||+++
T Consensus 192 ~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~-iv~~Ll~~------gadin~~d~~G~T~L~~A~~~ 264 (277)
T d2fo1e1 192 HYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQ------GASVEAVDATDHTARQLAQAN 264 (277)
T ss_dssp HHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCSSCCCSSSCCHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHH-HHHHHHHC------cCCCCCcCCCCCCHHHHHHHc
Confidence 00000000113456777888888888888887665 88888764 477788888888888888888
Q ss_pred CCHHHHHHHHH
Q 002922 738 AHHSYIHLVQR 748 (865)
Q Consensus 738 Gn~eiIeLL~~ 748 (865)
||.+++++|++
T Consensus 265 ~~~~iv~lL~~ 275 (277)
T d2fo1e1 265 NHHNIVDIFDR 275 (277)
T ss_dssp TCHHHHHHHHT
T ss_pred CCHHHHHHHHH
Confidence 88888888774
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=2e-20 Score=181.48 Aligned_cols=162 Identities=17% Similarity=0.033 Sum_probs=122.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC----C--CCc
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL----D--KPG 662 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~----d--g~~ 662 (865)
++|||+||.+|+.++++.||+... ..+ ..++..|+||||+|+.+|+.++|++||++|++++. + +..
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~-~~~-------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 72 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKP-SLL-------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 72 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCG-GGT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCC
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCC-Ccc-------cccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccc
Confidence 479999999999999999997631 122 23467799999999999999999999999987652 1 110
Q ss_pred h------------------------------------------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh
Q 002922 663 S------------------------------------------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA 700 (865)
Q Consensus 663 ~------------------------------------------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~ 700 (865)
+ +..+++.... ..+.+++.++..|+||||+|+.+++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~~~g~t~l~~a~~~~~~ 151 (229)
T d1ixva_ 73 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHRAASVGSL 151 (229)
T ss_dssp HHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh-hhcccccccCCCCCCccchhhhcccc
Confidence 0 0111111100 01345677899999999999999877
Q ss_pred HHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh-hh---hcCCCCCceEeecCC
Q 002922 701 ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK-IN---KKSSESGRVILDIPG 766 (865)
Q Consensus 701 e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K-~~---~~~~~~~~v~l~i~~ 766 (865)
+ +++.|++.+ ..++|.+|.+|+||||||+.+|+.+++++|+.+ .+ .+. .+|+++|+++-
T Consensus 152 ~-~~~~Ll~~~-----~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d-~~g~t~l~~A~ 214 (229)
T d1ixva_ 152 K-LIELLCGLG-----KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVAL 214 (229)
T ss_dssp H-HHHHHHTTT-----CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCC-TTSCCTGGGCS
T ss_pred c-ccccccccc-----cccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcC-CCCCCHHHHHh
Confidence 6 999998754 257899999999999999999999999988864 43 355 68889999874
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=2.5e-20 Score=173.82 Aligned_cols=145 Identities=19% Similarity=0.147 Sum_probs=113.8
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS 663 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~ 663 (865)
|....|+.|+.+|+.++|+.||+... .+++..+..|+||||+|+. ++.++|+.||+++++++. + +..+
T Consensus 1 ~~g~~L~~Aa~~g~~~~vk~lL~~~~--------~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~ 71 (156)
T d1bd8a_ 1 RAGDRLSGAAARGDVQEVRRLLHREL--------VHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSP 71 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTC--------CCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHhCC--------CCCCccCCCCCcccccccc-cccccccccccccccccccccccccc
Confidence 34567999999999999999997631 2233446779999999975 889999999999988763 2 2211
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+...+++.... +++++|.+|..|+||||+|+..++.+ ++++|+. ++++|.+|.+|+||||||++
T Consensus 72 l~~~~~~~~~~~~~~~l~-~~~~~n~~~~~~~t~L~~A~~~~~~~-i~~~L~~-------~~~~~~~d~~G~TpL~~A~~ 142 (156)
T d1bd8a_ 72 VHDAARTGFLDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTA-VVSFLAA-------ESDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHH-HHHHHHT-------TSCTTCCCTTSCCHHHHHHH
T ss_pred cccccccccccccccccc-cccccccccCCCCeeecccccccccc-ccccccc-------cccccccCCCCCCHHHHHHH
Confidence 23333332211 24678999999999999999998776 9998864 47889999999999999999
Q ss_pred cCCHHHHHHHHHh
Q 002922 737 RAHHSYIHLVQRK 749 (865)
Q Consensus 737 rGn~eiIeLL~~K 749 (865)
+|+.+++++|+++
T Consensus 143 ~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 143 RGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTT
T ss_pred cCCHHHHHHHHhh
Confidence 9999999999875
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=9.2e-21 Score=173.16 Aligned_cols=119 Identities=22% Similarity=0.192 Sum_probs=101.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||+|+.+|+.++++.||+.+++.+ ..+..|.||||.|+ +|+.+||++||++|++
T Consensus 4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n---------~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~------------- 60 (125)
T d1bi7b_ 4 ADWLATAAARGRVEEVRALLEAGANPN---------APNSYGRRPIQVMM-MGSARVAELLLLHGAE------------- 60 (125)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-------------
T ss_pred hhHHHHHHHCCCHHHHHHHHHcCCccc---------cccccccccccccc-cccccccccccccccc-------------
Confidence 368999999999999999999875432 23567999999775 7999999999999865
Q ss_pred HhhhcCCcccCCcccCCCCc-hHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGL-TPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~-TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.++..|. ||||+|+..++.+ ++++|++. |+++|.+|.+|+||||+|+++|+.+++++|.
T Consensus 61 -----------~~~~~~~~~~~~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Ll 122 (125)
T d1bi7b_ 61 -----------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARYLR 122 (125)
T ss_dssp -----------CCCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred -----------ccccccccccccccccccccccc-cccccccc------ccccccccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 566777665 6999999998776 99999874 5889999999999999999999999999986
Q ss_pred H
Q 002922 748 R 748 (865)
Q Consensus 748 ~ 748 (865)
.
T Consensus 123 s 123 (125)
T d1bi7b_ 123 A 123 (125)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=6.5e-20 Score=175.29 Aligned_cols=131 Identities=21% Similarity=0.139 Sum_probs=107.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..|+-|++.+....++.++..+++.+... .....+..|+||||+|++. ++.+||++||++|++
T Consensus 8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 73 (154)
T d1dcqa1 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN----------- 73 (154)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-----------
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCcCCCC---CcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-----------
Confidence 35778899999888888887765433211 1112245689999999984 688999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|.+|+||||||+.+|+.+++++|
T Consensus 74 -------------in~~d~~g~TpLh~A~~~~~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~i~~~L 133 (154)
T d1dcqa1 74 -------------LDKQTGKGSTALHYCCLTDNAE-CLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEELL 133 (154)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------hhhhhhhhcccccccccccccc-cccccccc------CccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6889999999999999998766 99999874 588999999999999999999999999999
Q ss_pred HHhhhhcC
Q 002922 747 QRKINKKS 754 (865)
Q Consensus 747 ~~K~~~~~ 754 (865)
++..+.+.
T Consensus 134 ~~~~~~~~ 141 (154)
T d1dcqa1 134 TQALSGRF 141 (154)
T ss_dssp HHHHTTCC
T ss_pred HHhCCCCC
Confidence 99877655
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=3.5e-20 Score=170.59 Aligned_cols=145 Identities=17% Similarity=0.081 Sum_probs=114.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
..+||+|+.+|+.++|+.||+.+++.+ ..+..|+||||+|+ .|+.+++++||++|++++. + +..+
T Consensus 2 ~~~Lh~Aa~~g~~~~v~~Ll~~g~d~n---------~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~ 71 (156)
T d1ihba_ 2 GNELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIH 71 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHCCCCcC---------ccCCcccccccccc-cccccccccccccccccccccccCccccc
Confidence 378999999999999999999875432 23667999999886 7899999999999998762 2 2211
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
.....+... ..+..+++..+..|.||||+|+..++.+ ++++|++.+ +.+++.+|.+|+||||+|+++|
T Consensus 72 ~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~Ll~~~-----~~~~~~~d~~g~TpL~~A~~~~ 144 (156)
T d1ihba_ 72 DAARAGFLDTLQTL-LEFQADVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHT-----ASNVGHRNHKGDTACDLARLYG 144 (156)
T ss_dssp HHHHHTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHS-----CCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccccccccccccc-cccccccccccccccccccccccccccc-ccccccccc-----cccccccCCCCCCHHHHHHHcC
Confidence 122222211 1124578999999999999999998776 899998754 2467999999999999999999
Q ss_pred CHHHHHHHHHhh
Q 002922 739 HHSYIHLVQRKI 750 (865)
Q Consensus 739 n~eiIeLL~~K~ 750 (865)
+.+++++|++++
T Consensus 145 ~~~iv~~Ll~~G 156 (156)
T d1ihba_ 145 RNEVVSLMQANG 156 (156)
T ss_dssp CHHHHHHHHHTC
T ss_pred CHHHHHHHHhcC
Confidence 999999998863
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.81 E-value=3.5e-21 Score=174.63 Aligned_cols=106 Identities=20% Similarity=0.113 Sum_probs=92.6
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
++|++|+++|+.++++.||+.+++.+ ..+..|+||||+|+..|+.+++++|+++|++
T Consensus 4 tpL~~A~~~g~~~~v~~Ll~~g~d~n---------~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-------------- 60 (118)
T d1myoa_ 4 KEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLKGAD-------------- 60 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTCCCC---------CCSSSSCCTTHHHHHHSTTTHHHHHHHSSCT--------------
T ss_pred hHHHHHHHCCCHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccccce--------------
Confidence 79999999999999999998875432 2356799999999999999999999999864
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
+|.+|..|+||||+|+.+++.+ ++++|++. |||+|.+|.+|+||||+|.
T Consensus 61 ----------in~~d~~g~tpLh~A~~~~~~~-~v~~Ll~~------Gad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 61 ----------INAPDKHHITPLLSAVYEGHVS-CVKLLLSK------GADKTVKGPDGLTALEATD 109 (118)
T ss_dssp ----------TTCCSSSCSCHHHHHHTTTCCH-HHHHHHTT------CCCSSSSSSSTCCCCCTCS
T ss_pred ----------eeecccccccchhhhhhcCchh-hhhhhhcc------cccceeeCCCCCCHHHHHh
Confidence 5778899999999999998877 99999874 5889999999999999994
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=3.2e-20 Score=170.90 Aligned_cols=122 Identities=20% Similarity=0.140 Sum_probs=104.4
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
.+|+.|+..|+.++|+.||+.+++.+ ..+..|+||||+|+..|+.+++++||++|++
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n---------~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-------------- 59 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDPS---------LPNDEGITALHNAVCAGHTEIVKFLVQFGVN-------------- 59 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCC---------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC--------------
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCcc---------ccccccccccccccccccccccccccccccc--------------
Confidence 58999999999999999999875433 2366799999999999999999999999864
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHH--HHcCCHHHHHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYA--SLRAHHSYIHLV 746 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyA--a~rGn~eiIeLL 746 (865)
+|.+|.+|+||||+|+.+++.+ +|++|++. ||++|++|. +|+||+++| +.+|+.+++++|
T Consensus 60 ----------~~~~d~~g~tpLh~A~~~g~~~-~v~~Ll~~------ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L 122 (130)
T d1ycsb1 60 ----------VNAADSDGWTPLHCAASCNNVQ-VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122 (130)
T ss_dssp ----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred ----------cccccccCcccccccchhhHHH-HHHHHHHc------CCCcccccCCCCCCHHHHHHHHHcChHHHHHHH
Confidence 5788999999999999998876 99999875 488898875 589998876 567999999999
Q ss_pred HHhhh
Q 002922 747 QRKIN 751 (865)
Q Consensus 747 ~~K~~ 751 (865)
+..-.
T Consensus 123 ~~~~~ 127 (130)
T d1ycsb1 123 YGVQE 127 (130)
T ss_dssp HHHHH
T ss_pred HhHHH
Confidence 87543
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.1e-19 Score=178.87 Aligned_cols=146 Identities=17% Similarity=0.169 Sum_probs=76.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCC------------------------CCCchHHhhccccHHHHHHHcCCH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTG------------------------DHTSSELAILEMGLLHKAVRRNCR 643 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~------------------------~~s~~~~~~~G~TpLH~AV~~gn~ 643 (865)
.++|||+|+.+|+.+++++|++.......... +.++...+..|.||||+|+.+|+.
T Consensus 37 G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~ 116 (223)
T d1uoha_ 37 SRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRH 116 (223)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHhhhhcccccccccccccccccccccccccccccccccchhHHHhccCceeEeeCCCCCchhhHHHHcCCH
Confidence 45777777777777777777766543211000 001111233455555555555555
Q ss_pred HHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc
Q 002922 644 PMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ 723 (865)
Q Consensus 644 eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNak 723 (865)
+++++||++|++ +|.+|..|.||||+|+..+..+ ++++|++. ++++|.+
T Consensus 117 e~~~~Ll~~g~d------------------------~~~~~~~~~t~L~~a~~~~~~~-~~~~L~~~------~~~i~~~ 165 (223)
T d1uoha_ 117 EIAVMLLEGGAN------------------------PDAKDHYEATAMHRAAAKGNLK-MIHILLYY------KASTNIQ 165 (223)
T ss_dssp HHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCC
T ss_pred HHHHHHHHCCCC------------------------CCCcCCCCCccchhhhhcCCcc-hhhhhccc------cceeeec
Confidence 555555555544 4555555555555555554433 55555432 2344555
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 724 DSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 724 D~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|.+|+||||+|+.+|+.+++++|+++.++ ++ .+|+++|+++
T Consensus 166 d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d-~~g~tpl~~A 209 (223)
T d1uoha_ 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN-KEEKTPLQVA 209 (223)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHC
T ss_pred cCCCCceeccccccCcHHHHHHHHHCCCCCCCCC-CCCCCHHHHH
Confidence 55555555555555555555555555433 22 3445555554
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.80 E-value=4.2e-19 Score=178.03 Aligned_cols=162 Identities=18% Similarity=0.119 Sum_probs=123.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC---CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD---KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d---g~~~-- 663 (865)
.++|+.||.+|+.++|+.||+.|++.+ ..+..|.||||+|+.+|+.+||++||++|++.... +..+
T Consensus 41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn---------~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~ 111 (291)
T d1s70b_ 41 GAVFLAACSSGDTEEVLRLLERGADIN---------YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLH 111 (291)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTT---------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHCCCCCC---------ccCCCCCcHHHHHHhcCCceeeeeeccccccccccccccccccc
Confidence 489999999999999999999885432 33667999999999999999999999999864421 1000
Q ss_pred ---------hhHHHHhh------------------------------h-c------------------------CCcccC
Q 002922 664 ---------RQKQLVDR------------------------------A-G------------------------SGFIFK 679 (865)
Q Consensus 664 ---------~~k~LV~~------------------------------~-s------------------------~~y~~d 679 (865)
..+.+++. . . .....+
T Consensus 112 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (291)
T d1s70b_ 112 AAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN 191 (291)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccccccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccc
Confidence 01111100 0 0 000112
Q ss_pred CcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCC
Q 002922 680 PNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSE 756 (865)
Q Consensus 680 ~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~ 756 (865)
....+..|.||||+|+..++.+ +++.|++. ++++|.+|.+|+||||+|+..|+.++|++|++++++ ++ .
T Consensus 192 ~~~~~~~g~t~L~~a~~~~~~~-~~~~Ll~~------g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d-~ 263 (291)
T d1s70b_ 192 DVRHAKSGGTALHVAAAKGYTE-VLKLLIQA------RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN-K 263 (291)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHH-HHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-T
T ss_pred cccccCCCCChhhHHHHcCChh-hhcccccc------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-C
Confidence 3556788999999999998766 99999874 478899999999999999999999999999998654 44 5
Q ss_pred CCceEeecCCC
Q 002922 757 SGRVILDIPGS 767 (865)
Q Consensus 757 ~~~v~l~i~~~ 767 (865)
.|+|+|+++..
T Consensus 264 ~G~TaL~~A~e 274 (291)
T d1s70b_ 264 VGQTAFDVADE 274 (291)
T ss_dssp TSCCTTTSCCS
T ss_pred CCCCHHHHHHH
Confidence 78899999853
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.79 E-value=5.1e-19 Score=169.08 Aligned_cols=151 Identities=23% Similarity=0.139 Sum_probs=106.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCcc-CCCCCchH------------------------HhhccccHHHHHHHcCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVD-TGDHTSSE------------------------LAILEMGLLHKAVRRNC 642 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~-~~~~s~~~------------------------~~~~G~TpLH~AV~~gn 642 (865)
.+++||+||..|+.+++++||+.+++.+.. ..+.++.. ....|.++.+.+.....
T Consensus 23 G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (209)
T d1ot8a_ 23 GETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAI 102 (209)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 569999999999999999999988764431 11111111 00125566777777777
Q ss_pred HHHHHHHHhcCCCCCC---CCCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCC
Q 002922 643 RPMVELLLNYAPDNVL---DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPG 712 (865)
Q Consensus 643 ~eIVELLL~~Gadi~~---dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~ 712 (865)
..+.++|+.++++++. .+..+ ....++.... .+..++|..|..|.||||+||..++.+ +|++|++.
T Consensus 103 ~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~-~~~~~~~~~d~~g~TpL~~A~~~g~~~-~v~~Ll~~-- 178 (209)
T d1ot8a_ 103 EGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILL-MHHANRDAQDDKDETPLFLAAREGSYE-ASKALLDN-- 178 (209)
T ss_dssp TTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT--
T ss_pred hhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeec-cccccccccccccccccchhccccHHH-HHHHHHHC--
Confidence 7777777777766542 12111 1222232111 113568899999999999999998766 99999874
Q ss_pred CCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 713 SVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 713 ~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
|||+|.+|.+|+||||+|+++|+.++|++|
T Consensus 179 ----gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 179 ----FANREITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp ----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ----CCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 588999999999999999999999999987
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=7.2e-19 Score=172.97 Aligned_cols=120 Identities=19% Similarity=0.178 Sum_probs=104.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..+|||+|+..|..+++++|++.+++.+ ..+..|.||||+|+.+++.+++++|+.+++
T Consensus 103 g~tpL~~A~~~~~~e~~~~Ll~~g~d~~---------~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~------------- 160 (223)
T d1uoha_ 103 GCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYEATAMHRAAAKGNLKMIHILLYYKA------------- 160 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------
T ss_pred CCchhhHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCccchhhhhcCCcchhhhhccccc-------------
Confidence 4589999999999999999999875432 235678999999999999999999999975
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
++|.+|..|+||||+||..++.+ +|++|++. |||+|.+|.+|+||||+|. .|+.+++++|+
T Consensus 161 -----------~i~~~d~~g~TpL~~Aa~~g~~~-~v~~LL~~------Gad~~~~d~~g~tpl~~A~-~~~~~i~~~Ll 221 (223)
T d1uoha_ 161 -----------STNIQDTEGNTPLHLACDEERVE-EAKLLVSQ------GASIYIENKEEKTPLQVAK-GGLGLILKRMV 221 (223)
T ss_dssp -----------CSCCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHCC-TTHHHHHHHHH
T ss_pred -----------eeeeccCCCCceeccccccCcHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHH-CCCHHHHhccc
Confidence 46888999999999999998876 99999874 5889999999999999995 69999998876
Q ss_pred H
Q 002922 748 R 748 (865)
Q Consensus 748 ~ 748 (865)
+
T Consensus 222 ~ 222 (223)
T d1uoha_ 222 E 222 (223)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=3e-18 Score=159.68 Aligned_cols=165 Identities=19% Similarity=0.105 Sum_probs=120.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~-- 663 (865)
.||||+|+.+|+.++++.||+.+..... +.+..+..|+||||+|+..|+.++|++||++|++.+. ++...
T Consensus 4 ~TpLh~A~~~g~~~~v~~Ll~~~~~~g~-----~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 78 (228)
T d1k1aa_ 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGR-----ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH 78 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHCCC-----CCCccCCCCCccceehhcccccccccccccccccccccccccccccc
Confidence 5899999999999999999986543222 2223466799999999999999999999999987653 11100
Q ss_pred -----h----hHHHHh---------------------------------hhcCCcccCCcccCCCCchHHHHHHhcCChH
Q 002922 664 -----R----QKQLVD---------------------------------RAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 701 (865)
Q Consensus 664 -----~----~k~LV~---------------------------------~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e 701 (865)
. .+.+.. .............+..|.||||+|+..+..+
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 158 (228)
T d1k1aa_ 79 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS 158 (228)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred cccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhh
Confidence 0 000000 0000001112345668999999999987665
Q ss_pred HHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 702 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 702 ~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+++.+++.+ .+++.+|.+|.||||+|+.+|+.+++++|+++.+| +. .+|.|+|+++.
T Consensus 159 -~~~~~~~~~------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d-~~G~TpL~~A~ 218 (228)
T d1k1aa_ 159 -MVQLLLQHG------ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLMVAR 218 (228)
T ss_dssp -HHHHHHHTT------CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCTTTTCS
T ss_pred -hhhhhhhhc------cccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHH
Confidence 888887653 56789999999999999999999999999998665 33 57888888874
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=5.3e-18 Score=168.25 Aligned_cols=157 Identities=17% Similarity=0.055 Sum_probs=121.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCch---HHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCC-C--CC
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSS---ELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVL-D--KP 661 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~---~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~-d--g~ 661 (865)
.+.|++|+.+++..+++.++....+.++.. .... .....|.||||+|+++|+.+++++||++ |++++. + +.
T Consensus 106 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~ 183 (285)
T d1wdya_ 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRR--KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCC--CCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred CchhHHHHHhcchhhhhhhhhhcccccccc--cchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCC
Confidence 478999999999999999998765433321 1111 1234589999999999999999999964 777663 2 11
Q ss_pred c-----------hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH
Q 002922 662 G-----------SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP 730 (865)
Q Consensus 662 ~-----------~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP 730 (865)
. .+...+++.+.. .++++|.++..|.||||+||..++.+ +|++|++.. ++++|.+|.+|.||
T Consensus 184 ~~~~~~~~~~~~~~~~~i~~~Li~-~ga~~n~~~~~g~t~L~~a~~~~~~~-~v~~lL~~~-----g~din~~d~~G~Tp 256 (285)
T d1wdya_ 184 NALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGKTA 256 (285)
T ss_dssp CHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHH-HHHHHHHSS-----SCCTTCCCTTSCCH
T ss_pred cccccccccccchHHHHHHHHHHH-CCCCCCccCCCCCCccchhhhcCcHH-HHHHHHHcC-----CCCCcCCCCCCCCH
Confidence 1 123344442211 25689999999999999999998876 999998642 47899999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 731 NDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 731 LHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
||+|+++|+.+++++|++++++..
T Consensus 257 L~~A~~~~~~eiv~~Ll~~GAd~n 280 (285)
T d1wdya_ 257 LLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC
Confidence 999999999999999999999876
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.76 E-value=3.4e-19 Score=161.33 Aligned_cols=104 Identities=25% Similarity=0.170 Sum_probs=92.2
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC
Q 002922 631 MGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 631 ~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
.|||++|+++|+.++|++||++|++ +|.+|..|+||||+|+.+++.+ ++++|++.
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d------------------------~n~~~~~g~t~lh~A~~~~~~~-~~~~ll~~ 57 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQLE-ILEFLLLK 57 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCC------------------------CCCCSSSSCCTTHHHHHHSTTT-HHHHHHHS
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhc------------------------cccccccccccccccccccccc-cccccccc
Confidence 4899999999999999999999864 6788999999999999998877 99999774
Q ss_pred CCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 711 PGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 711 p~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
++++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 58 ------g~din~~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~~~~d-~~G~t~l~~a~ 109 (118)
T d1myoa_ 58 ------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG-PDGLTALEATD 109 (118)
T ss_dssp ------SCTTTCCSSSCSCHHHHHHTTTCCHHHHHHHTTCCCSSSSS-SSTCCCCCTCS
T ss_pred ------cceeeecccccccchhhhhhcCchhhhhhhhcccccceeeC-CCCCCHHHHHh
Confidence 478999999999999999999999999999998554 44 67889998874
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.9e-18 Score=178.34 Aligned_cols=142 Identities=18% Similarity=0.147 Sum_probs=103.6
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++|++|++.++.++++.+++.....+. .+..|.||||.|++.++.+++++|+++|++.+. + +..+
T Consensus 232 ~t~l~~a~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~ 302 (408)
T d1n11a_ 232 VTPLHLAAQEGHAEMVALLLSKQANGNL---------GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 302 (408)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHH
T ss_pred CCHHHHHHHhCcHhHhhhhhcccccccc---------ccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccch
Confidence 4677777777777777777766533221 234567778888888888888888777776552 1 1111
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+...+++.... +++++|.+|..|.||||+|+.+++.+ +|++|++. ||++|++|.+|+||||||+++|
T Consensus 303 ~~~~~~~~~~~~~ll~-~g~~in~~d~~G~T~Lh~A~~~g~~~-iv~~Ll~~------GAd~n~~d~~G~t~L~~A~~~~ 374 (408)
T d1n11a_ 303 VASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTD-IVTLLLKN------GASPNEVSSDGTTPLAIAKRLG 374 (408)
T ss_dssp HHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCSSSCCHHHHHHHTT
T ss_pred hhcccCcceeeeeecc-ccccccccCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcC
Confidence 11122221111 25678999999999999999998877 99999875 5889999999999999999999
Q ss_pred CHHHHHHHH
Q 002922 739 HHSYIHLVQ 747 (865)
Q Consensus 739 n~eiIeLL~ 747 (865)
|.++|++|.
T Consensus 375 ~~~iv~~L~ 383 (408)
T d1n11a_ 375 YISVTDVLK 383 (408)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999884
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.73 E-value=4.3e-18 Score=162.57 Aligned_cols=148 Identities=20% Similarity=0.134 Sum_probs=111.3
Q ss_pred HHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CC--Cc---------------
Q 002922 601 CAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DK--PG--------------- 662 (865)
Q Consensus 601 ~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg--~~--------------- 662 (865)
.+||+.||+.|++.+. ..|..|+||||+||++|+.++|++||.+|++++. +. ..
T Consensus 2 ~~~v~~Ll~~g~din~--------~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~ 73 (209)
T d1ot8a_ 2 AQVISDLLAQGAELNA--------TMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQ 73 (209)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHCCCCcCc--------CcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 4799999999865221 2477899999999999999999999999987652 11 00
Q ss_pred -------------------h-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc
Q 002922 663 -------------------S-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI 716 (865)
Q Consensus 663 -------------------~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~ 716 (865)
. ....+.+. ...++.+++.++..|+||||+|+.++..+ +++.|++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~~~~~~~~~~~~~~~t~l~~~~~~~~~~-~~~~l~~~~----- 146 (209)
T d1ot8a_ 74 ILLRNRATNLNARMHDGTTPLILAARLAIEGMVED-LITADADINAADNSGKTALHWAAAVNNTE-AVNILLMHH----- 146 (209)
T ss_dssp HHHTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHH-HHHTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccchhhhhh-hhhhcccccccCCCCCCcchhhcccCcce-eeeeecccc-----
Confidence 0 00000110 01124678899999999999999987655 889887753
Q ss_pred cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 717 EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 717 gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
+++|.+|.+|.||||+|+..|+.+++++|+++.+| +. .+|.|+|+++
T Consensus 147 -~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d-~~g~Tpl~~A 196 (209)
T d1ot8a_ 147 -ANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITD-HMDRLPRDVA 196 (209)
T ss_dssp -CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred -ccccccccccccccchhccccHHHHHHHHHHCCCCCCCcC-CCCCCHHHHH
Confidence 67899999999999999999999999999998665 23 4566777665
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=3.7e-18 Score=166.63 Aligned_cols=148 Identities=16% Similarity=0.088 Sum_probs=107.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL--------- 658 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~--------- 658 (865)
.+||||+|+..|..+++++|++.+++.+ ..+..|.||||+|+.+++.+++++|++.+.+...
T Consensus 39 g~TpLh~A~~~~~~~iv~~L~~~g~d~~---------~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 109 (221)
T d1iknd_ 39 QQTPLHLAVITNQPEIAEALLGAGCDPE---------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 109 (221)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSC---------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred CCcccccccccccccccccccccccccc---------ccccccccccccccccccccccchhhhhccccccccccccccc
Confidence 4699999999999999999988765432 2356789999999999999999999998765331
Q ss_pred CCCch-------hhHHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH
Q 002922 659 DKPGS-------RQKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP 730 (865)
Q Consensus 659 dg~~~-------~~k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP 730 (865)
++..+ ....++.... .++..++..+ .+|+||||+|+..++.+ ++++|++. |||+|++|.+|+||
T Consensus 110 ~~~t~l~~a~~~~~~~~~~~l~-~~~~~~~~~~~~~G~T~L~~A~~~g~~~-~v~~Ll~~------gad~~~~~~~G~tp 181 (221)
T d1iknd_ 110 NGHTCLHLASIHGYLGIVELLV-SLGADVNAQEPCNGRTALHLAVDLQNPD-LVSLLLKC------GADVNRVTYQGYSP 181 (221)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCSCCCCTTCCCG
T ss_pred ccchhhhHHhhcCChhheeeec-ccCcccccccccCCCCccccccccccHH-HHHHHHhc------CCcccccCCCCCCH
Confidence 11111 1122222111 1133455544 56899999999887766 88988764 57888999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhh
Q 002922 731 NDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 731 LHyAa~rGn~eiIeLL~~K~~~ 752 (865)
||+|+.+++.+++++|.+...+
T Consensus 182 l~~A~~~~~~~~~~~l~~~~~~ 203 (221)
T d1iknd_ 182 YQLTWGRPSTRIQQQLGQLTLE 203 (221)
T ss_dssp GGGCTTSSCHHHHHHHHTTSCG
T ss_pred HHHHHHCCCHHHHHHHHHcCCc
Confidence 9999999999998888876443
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=4.9e-18 Score=164.44 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=103.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++|++++..++.++++.|++.+...+ ..+..|+||||+|+.+|+.+++++|++++.+
T Consensus 105 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~------------ 163 (229)
T d1ixva_ 105 GVTCLHLAVGKKWFEVSQFLIENGASVR---------IKDKFNQIPLHRAASVGSLKLIELLCGLGKS------------ 163 (229)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred cccccccccccchhhhhhhhhhhccccc---------ccCCCCCCccchhhhcccccccccccccccc------------
Confidence 4578999999999999999998764322 1255688999999999999999999998742
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
++|.+|..|+||||+|+.+++.+ +|++|++. .||++|++|.+|+||||||+ +.+++++|+
T Consensus 164 -----------~in~~d~~g~TpLh~A~~~~~~~-~v~~Ll~~-----~gad~~~~d~~g~t~l~~A~---~~~~~~~Ll 223 (229)
T d1ixva_ 164 -----------AVNWQDKQGWTPLFHALAEGHGD-AAVLLVEK-----YGAEYDLVDNKGAKAEDVAL---NEQVKKFFL 223 (229)
T ss_dssp -----------CSCCCCTTSCCHHHHHHHTTCHH-HHHHHHHH-----HCCCSCCCCTTSCCTGGGCS---CHHHHHHHH
T ss_pred -----------cccccccccCCchhhhcccccHH-HHHHHHHh-----cCCCCCCcCCCCCCHHHHHh---hHHHHHHHH
Confidence 46889999999999999998766 99999853 25889999999999999998 468999999
Q ss_pred Hhhhh
Q 002922 748 RKINK 752 (865)
Q Consensus 748 ~K~~~ 752 (865)
+++.|
T Consensus 224 ~~g~d 228 (229)
T d1ixva_ 224 NNVVD 228 (229)
T ss_dssp HHCCC
T ss_pred HcCCC
Confidence 99775
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.7e-18 Score=169.09 Aligned_cols=166 Identities=18% Similarity=0.077 Sum_probs=118.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
++|||+|+.+|+.++++.|++.+... +.+++.++..|+||||+|+..|+.+++++|+++|++++. + +..+
T Consensus 3 ~t~Lh~A~~~g~~~~~~~li~~~~~~-----~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~ 77 (221)
T d1iknd_ 3 DSFLHLAIIHEEKALTMEVIRQVKGD-----LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 77 (221)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC----------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHhC-----CCCcccCCCCCCccccccccccccccccccccccccccccccccccccc
Confidence 58999999999876666555443211 122334477899999999999999999999999998773 2 3221
Q ss_pred -----h----hHHHHh-hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHH
Q 002922 664 -----R----QKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPND 732 (865)
Q Consensus 664 -----~----~k~LV~-~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLH 732 (865)
+ .+.+.. +.........+.....|.||||+|+..++.+ +++.|+.. ++++|.++ .+|.||||
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~-~~~~l~~~------~~~~~~~~~~~G~T~L~ 150 (221)
T d1iknd_ 78 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG-IVELLVSL------GADVNAQEPCNGRTALH 150 (221)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHH
T ss_pred cccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChh-heeeeccc------CcccccccccCCCCccc
Confidence 1 222222 1111112234556677999999999998766 88888664 46667765 57999999
Q ss_pred HHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 733 YASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|+++|+.+++++|+++.+| +. .+|+++|+++-.
T Consensus 151 ~A~~~g~~~~v~~Ll~~gad~~~~~-~~G~tpl~~A~~ 187 (221)
T d1iknd_ 151 LAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQLTWG 187 (221)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCC-TTCCCGGGGCTT
T ss_pred cccccccHHHHHHHHhcCCcccccC-CCCCCHHHHHHH
Confidence 99999999999999998554 54 688999999754
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=1.1e-17 Score=153.84 Aligned_cols=90 Identities=22% Similarity=0.262 Sum_probs=82.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
++||.|+.+|+.++|++||++|+| +|.+|..|+||||+|+..++.+ ++++|++.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d------------------------~n~~d~~g~t~Lh~A~~~~~~~-~~~~ll~~- 56 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDD------------------------PSLPNDEGITALHNAVCAGHTE-IVKFLVQF- 56 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSS------------------------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH-
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCC------------------------cccccccccccccccccccccc-cccccccc-
Confidence 789999999999999999999864 6889999999999999998766 99999874
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
++++|.+|.+|+||||+|+..|+.+++++|+++.++
T Consensus 57 -----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 92 (130)
T d1ycsb1 57 -----GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 92 (130)
T ss_dssp -----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----ccccccccccCcccccccchhhHHHHHHHHHHcCCC
Confidence 578899999999999999999999999999998665
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.67 E-value=6e-17 Score=166.91 Aligned_cols=146 Identities=18% Similarity=0.034 Sum_probs=101.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCH---HHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCR---PMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~---eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+..|+.++|++||+.+++.+ .++..|+||||+||..++. ..++.|+++..
T Consensus 107 G~T~LH~Aa~~g~~~~v~~Ll~~gad~~---------~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~---------- 167 (301)
T d1sw6a_ 107 GNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY---------- 167 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------cCCcccccHHHHhhhcccchhhhhHHHHHHHHh----------
Confidence 5699999999999999999999875422 3366799999999987752 11222232210
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh-----------HHHHHHhhcCCCCC-------------------
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----------ENVLDALTDDPGSV------------------- 714 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~-----------e~IVelLL~dp~~I------------------- 714 (865)
.+++.+|..|+||||+|+..+.. +.++.+|...+...
T Consensus 168 -------------~~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T d1sw6a_ 168 -------------PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 234 (301)
T ss_dssp -------------GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred -------------hhhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcc
Confidence 02456788899999998865431 22344443321100
Q ss_pred ------------CccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 715 ------------GIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 715 ------------g~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
.++..+|++|.+|+||||+|+++|+.++|++|+++.++ +. .+|.|+|+++-
T Consensus 235 ~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n-~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 235 KDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN-KSGLRPVDFGA 300 (301)
T ss_dssp -CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGGGGTC
T ss_pred hHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHcC
Confidence 01123799999999999999999999999999998775 33 47888887763
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.1e-16 Score=158.59 Aligned_cols=168 Identities=24% Similarity=0.208 Sum_probs=116.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
+++|++|+.+|+.++|++||+.|++.+.. .+..|+||||+|+..|+.+|+++|++++++... + +..+
T Consensus 6 ~~~L~~Ai~~~~~e~vk~Ll~~G~din~~--------~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~ 77 (285)
T d1wdya_ 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ--------EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC--------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHCCCCcCcc--------CCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhH
Confidence 58999999999999999999998653321 134699999999999999999999999875532 1 0000
Q ss_pred --------------------------------------h----hHHHHhhhc-----CCcccCCcccCCCCchHHHHHHh
Q 002922 664 --------------------------------------R----QKQLVDRAG-----SGFIFKPNVIGPAGLTPLHVAAC 696 (865)
Q Consensus 664 --------------------------------------~----~k~LV~~~s-----~~y~~d~Na~d~~G~TPLHlAA~ 696 (865)
+ .+.++.... ..+....+..+..|.||||+|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T d1wdya_ 78 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHH
Confidence 0 001111000 00011123455679999999999
Q ss_pred cCChHHHHHHhhcC-CCC-------------------------------CCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 697 RDDAENVLDALTDD-PGS-------------------------------VGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 697 ~~~~e~IVelLL~d-p~~-------------------------------Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
+++.+ +++.|++. +.. +..+|++|.+|.+|.||||+|+..|+.++++
T Consensus 158 ~~~~~-~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~ 236 (285)
T d1wdya_ 158 KGHVE-VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HTCHH-HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCHH-HHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHH
Confidence 98766 88888753 111 1234788899999999999999999999999
Q ss_pred HHHHh----hhhcCCCCCceEeecCC
Q 002922 745 LVQRK----INKKSSESGRVILDIPG 766 (865)
Q Consensus 745 LL~~K----~~~~~~~~~~v~l~i~~ 766 (865)
+|+.+ ++.+. ..|.|+|+++.
T Consensus 237 ~lL~~~g~din~~d-~~G~TpL~~A~ 261 (285)
T d1wdya_ 237 RLLEQEHIEINDTD-SDGKTALLLAV 261 (285)
T ss_dssp HHHHSSSCCTTCCC-TTSCCHHHHHH
T ss_pred HHHHcCCCCCcCCC-CCCCCHHHHHH
Confidence 88864 33344 46777777653
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=5.6e-17 Score=150.95 Aligned_cols=149 Identities=19% Similarity=0.107 Sum_probs=96.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCC-CCCchH---------------------------HhhccccHHHHHHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTG-DHTSSE---------------------------LAILEMGLLHKAVR 639 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~-~~s~~~---------------------------~~~~G~TpLH~AV~ 639 (865)
..+|||+|+..|+.++++.||+.+++.+.... +..+.. ......++||.+..
T Consensus 40 g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 119 (228)
T d1k1aa_ 40 RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred CCccceehhcccccccccccccccccccccccccccccccccccccccchhhhhhccccccccccccccccccccccccc
Confidence 35899999999999999999998866443211 001100 00113355555555
Q ss_pred cCCHHHHHHHHhcCCCCCC----CCCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 640 RNCRPMVELLLNYAPDNVL----DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 640 ~gn~eIVELLL~~Gadi~~----dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.....+.+.|.....+... .+..+ ....+++... .++.+++.+|..|.||||+||.+++.+ ++++|+
T Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~-~~~~~~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll 197 (228)
T d1k1aa_ 120 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL-QHGANVNAQMYSGSSALHSASGRGLLP-LVRTLV 197 (228)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHH
T ss_pred cccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhh-hhccccccccccCcchHHHHHHcCCHH-HHHHHH
Confidence 5555555555544433221 01111 1111222111 113467889999999999999998877 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
+. |||+|++|.+|+||||||+++|+.++|+
T Consensus 198 ~~------Gad~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 198 RS------GADSSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HT------TCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HC------CCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence 74 5889999999999999999999988764
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.65 E-value=1.2e-16 Score=160.03 Aligned_cols=140 Identities=18% Similarity=0.065 Sum_probs=106.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCC---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKP--- 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~--- 661 (865)
..++||+|+.+|+.+++++||+.+.+.... +..+.||||.|+..++.++++.|+++|+.... ++.
T Consensus 73 G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~---------~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 143 (291)
T d1s70b_ 73 GLTALHQACIDDNVDMVKFLVENGANINQP---------DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (291)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCC---------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHhcCCceeeeeecccccccccc---------cccccccccccccccccchhhcccccCcccccccccCcccc
Confidence 358999999999999999999987543221 34578999999999999999999988864431 000
Q ss_pred ---------------------------------------------------------ch-------hhHHHHhhhcCCcc
Q 002922 662 ---------------------------------------------------------GS-------RQKQLVDRAGSGFI 677 (865)
Q Consensus 662 ---------------------------------------------------------~~-------~~k~LV~~~s~~y~ 677 (865)
.+ ++..+++.+. .++
T Consensus 144 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll-~~g 222 (291)
T d1s70b_ 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI-QAR 222 (291)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH-TTT
T ss_pred ccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccc-cce
Confidence 00 1233444322 236
Q ss_pred cCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 678 FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 678 ~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+++|.++..|+||||+|+..++.+ +|++|++. |||+|++|.+|+||||+|+. +++++|..
T Consensus 223 ~din~~~~~g~TpL~~A~~~g~~~-iv~lLl~~------Gadv~~~d~~G~TaL~~A~e----~~~~~L~~ 282 (291)
T d1s70b_ 223 YDVNIKDYDGWTPLHAAAHWGKEE-ACRILVEN------LCDMEAVNKVGQTAFDVADE----DILGYLEE 282 (291)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred ecccccccCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHH----HHHHHHHH
Confidence 789999999999999999998876 99999875 58899999999999999985 35555554
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=3.5e-16 Score=162.51 Aligned_cols=161 Identities=20% Similarity=0.195 Sum_probs=127.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+++.....++.+.|+....... ..+..|+||||.|++.++.+++++++.++.+.+. + +..+
T Consensus 198 ~~t~l~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 268 (408)
T d1n11a_ 198 GYTPLHIAAKQNQVEVARSLLQYGGSAN---------AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 268 (408)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred CCCcchhhhccchhhhhhhhhhcccccc---------ccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChh
Confidence 4689999999999999999987653221 1244688999999999999999999999876652 2 2211
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++... .++++++..+..+.||||+|+..++.+ +++.|++. ++++|.+|.+|.||||+|+++
T Consensus 269 ~~a~~~~~~~i~~~Ll-~~g~~~~~~~~~~~t~L~~~~~~~~~~-~~~~ll~~------g~~in~~d~~G~T~Lh~A~~~ 340 (408)
T d1n11a_ 269 HLVAQEGHVPVADVLI-KHGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQH------QADVNAKTKLGYSPLHQAAQQ 340 (408)
T ss_dssp HHHHHHTCHHHHHHHH-HHTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhhhcCcHHHHHHHH-HCCCccccccccccccchhhcccCcce-eeeeeccc------cccccccCCCCCCHHHHHHHc
Confidence 2333444221 125688999999999999999998777 89999875 488999999999999999999
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+.++|++|++++++ +. .+|.++|+++.
T Consensus 341 g~~~iv~~Ll~~GAd~n~~d-~~G~t~L~~A~ 371 (408)
T d1n11a_ 341 GHTDIVTLLLKNGASPNEVS-SDGTTPLAIAK 371 (408)
T ss_dssp TCHHHHHHHHHTTCCSCCCC-SSSCCHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHH
Confidence 999999999998766 33 56889998873
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.63 E-value=1.3e-17 Score=176.45 Aligned_cols=128 Identities=15% Similarity=0.046 Sum_probs=100.5
Q ss_pred cchHHHHHHHCCCHHHHHH---HHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKK---LLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvkl---LLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++|++|+.+|+.++++. |+..++ +++..+..|+||||+|+++|+.++|++|+++|+++
T Consensus 90 ~~t~L~~Aa~~g~~~~~~~~~~L~~~~~---------~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-------- 152 (346)
T d2ajaa1 90 SEVICFVAAITGCSSALDTLCLLLTSDE---------IVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-------- 152 (346)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCS---------SCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT--------
T ss_pred CCcHHHHHHHhCCHHHHHHHHHHHhCCC---------cccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc--------
Confidence 4699999999999887766 555442 23345778999999999999999999999999763
Q ss_pred hHHHHhhhcCCcccCCccc--CCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHH
Q 002922 665 QKQLVDRAGSGFIFKPNVI--GPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSY 742 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~--d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ei 742 (865)
|.. +.+|+||||+||.+|+.+ ||++|++.++. ..+++.++.+|.||+|+|+.+||.++
T Consensus 153 ----------------~~~~~~~~g~t~L~~Aa~~g~~~-iv~~Ll~~~~~---~~~~~~~~~~~~t~l~~A~~~g~~~i 212 (346)
T d2ajaa1 153 ----------------IMAMIQAENYHAFRLAAENGHLH-VLNRLCELAPT---EATAMIQAENYYAFRWAAVGRGHHNV 212 (346)
T ss_dssp ----------------HHHHHSHHHHHHHHHHHHTTCHH-HHHHHHHSCGG---GHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred ----------------cccccccCCCChhHHHHHHhhHH-HHHHHHHcCCc---ccccccccCCCcchhhHHhhcCHHHH
Confidence 333 346999999999998877 99999875421 13346677788999999999999999
Q ss_pred HHHHHHhhhh
Q 002922 743 IHLVQRKINK 752 (865)
Q Consensus 743 IeLL~~K~~~ 752 (865)
+++|+++.++
T Consensus 213 v~~Ll~~ga~ 222 (346)
T d2ajaa1 213 INFLLDCPVM 222 (346)
T ss_dssp HHHHTTSHHH
T ss_pred HHHHHhCCCC
Confidence 9999987654
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=4.3e-17 Score=161.00 Aligned_cols=127 Identities=12% Similarity=0.038 Sum_probs=97.3
Q ss_pred hHHHHHHH-CCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 590 WLLEFSME-HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 590 tLL~fAve-rg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+|||+++. .|..++++.|....++ + . + ...|+||||+||.+|+.++|++||.+.. +.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~l~~~~~n--~--~--~----~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~-----------~~~ 60 (277)
T d2fo1e1 2 SPIKLHTEAAGSYAITEPITRESVN--I--I--D----PRHNRTVLHWIASNSSAEKSEDLIVHEA-----------KEC 60 (277)
T ss_dssp CCCHHHHHHHSSSCCCSCCSTTTTT--T--C--C----CSSCCCHHHHHHCTTCCSCCTTHHHHHH-----------HHH
T ss_pred ChHHHHHHhCCCHHHHHHHHhcCCC--c--C--C----CCCCccHHHHHHHcCCHHHHHHHHhcch-----------hHH
Confidence 46665554 3566666555544322 1 0 1 1359999999999999999999987742 122
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
++ .++|||.+|..|.||||+|+.+++.+ +|++|++. ||++|.+|.+|+||||+|...|+.++++.+..
T Consensus 61 l~-----~Gadvn~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~------Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~ 128 (277)
T d2fo1e1 61 IA-----AGADVNAMDCDENTPLMLAVLARRRR-LVAYLMKA------GADPTIYNKSERSALHQAAANRDFGMMVYMLN 128 (277)
T ss_dssp HH-----TCCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred HH-----cCCCccccCCCCCeeecccccccccc-cccccccc------ccccccccccccccccchhhhcchhhhhhhhh
Confidence 22 15689999999999999999998766 99999875 58899999999999999999999999988776
Q ss_pred h
Q 002922 749 K 749 (865)
Q Consensus 749 K 749 (865)
.
T Consensus 129 ~ 129 (277)
T d2fo1e1 129 S 129 (277)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2.5e-16 Score=143.39 Aligned_cols=103 Identities=22% Similarity=0.262 Sum_probs=86.7
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
+.++||+|+++|+.++|++||++|+| ||.+|..|.||||+|+ +++.+ ++++|++
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad------------------------~n~~~~~g~t~l~~a~-~g~~~-~v~~Ll~ 56 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGSAR-VAELLLL 56 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTCHH-HHHHHHT
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCc------------------------cccccccccccccccc-ccccc-ccccccc
Confidence 35899999999999999999999864 6788999999999875 56665 9999987
Q ss_pred CCCCCCccccccccCCCCC-CHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 710 DPGSVGIEAWKSAQDSTGL-TPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 710 dp~~Ig~gA~VNakD~~G~-TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
. |+++|.+|..|. ||||+|+++|+.+++++|+++..+ ++ .+|.++|+++
T Consensus 57 ~------ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~G~T~l~~A 109 (125)
T d1bi7b_ 57 H------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRD-AWGRLPVDLA 109 (125)
T ss_dssp T------TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCC-TTCCCHHHHH
T ss_pred c------cccccccccccccccccccccccccccccccccccccccccc-CCCCCHHHHH
Confidence 4 578899999876 699999999999999999998554 33 5667777665
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.58 E-value=1.5e-15 Score=138.85 Aligned_cols=125 Identities=19% Similarity=0.181 Sum_probs=92.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHH
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLD--KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAEN 702 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~d--g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~ 702 (865)
||||.||+.|+.++|++||++|++.+.+ |..+ ...+++..... +....+..+..+.|++|+++...+.+
T Consensus 4 t~L~~Aa~~g~~~~v~~LL~~ga~~~~~~~g~t~L~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (153)
T d1awcb_ 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLR-AGVSRDARTKVDRTPLHMAASEGHAN- 81 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCHH-
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCcccccCCCcccccccccccccccccccc-ccccccccccccccccccccccccce-
Confidence 9999999999999999999999976543 3222 22333332211 12234555667788888888776655
Q ss_pred HHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 703 VLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 703 IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
+++.|... +++.+.+|.+|+||||+|+..|+.+++++|+++..+ +. .+|.|+|+++
T Consensus 82 ~~~~l~~~------~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d-~~g~Tpl~~A 140 (153)
T d1awcb_ 82 IVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS-KFCKTAFDIS 140 (153)
T ss_dssp HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred eeeccccc------CCccccccccCchHHHhhhhcchhheeeeccccccCCcccC-CCCCCHHHHH
Confidence 77777653 467899999999999999999999999999998554 34 6788888875
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.56 E-value=3.6e-16 Score=165.26 Aligned_cols=152 Identities=10% Similarity=-0.031 Sum_probs=102.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC------CCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL------DKP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~------dg~ 661 (865)
..++||+|+.+|+.++|++|++.+++.+. ...+..|.||||+|+++|+.+||++||++|++... ++.
T Consensus 126 g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~-------~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 198 (346)
T d2ajaa1 126 NYQAFRLAAENGHLHVLNRLCELAPTEIM-------AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 198 (346)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHH-------HHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCccc-------cccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCc
Confidence 45899999999999999999998743221 12234689999999999999999999999975321 111
Q ss_pred c-------hhhHHHHhhhcCCcccC------------------------------------------CcccC-------C
Q 002922 662 G-------SRQKQLVDRAGSGFIFK------------------------------------------PNVIG-------P 685 (865)
Q Consensus 662 ~-------~~~k~LV~~~s~~y~~d------------------------------------------~Na~d-------~ 685 (865)
+ .++.++|+.+... +++ .+..+ .
T Consensus 199 t~l~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~ 277 (346)
T d2ajaa1 199 AFRWAAVGRGHHNVINFLLDC-PVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGF 277 (346)
T ss_dssp HHHHHHSTTCCHHHHHHHTTS-HHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHH
T ss_pred chhhHHhhcCHHHHHHHHHhC-CCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccc
Confidence 1 0233344421100 000 01111 1
Q ss_pred CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002922 686 AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 749 (865)
Q Consensus 686 ~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K 749 (865)
.+.|+||.|+..+.. +++++|++.+.. ...+..+..+.+|.||||+|+++||.++|++|++-
T Consensus 278 ~~~~~l~~a~~~~~l-d~v~~Ll~~~~~-~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 278 YMLRNLIRRNDEVLL-DDIRFLLSIPGI-KALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp HHHHHHHHHCCGGGH-HHHHHHHTSTTT-GGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred hhhhHHHHHhcCChH-HHHHHHHhCcCh-hhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 235788888877544 489999876532 22344566778899999999999999999999863
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.50 E-value=2.1e-14 Score=136.70 Aligned_cols=89 Identities=18% Similarity=0.139 Sum_probs=76.4
Q ss_pred cchHHHHHHH---CCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSME---HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAve---rg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+. +|+.+++++||+.+++ ++ ..+..|+||||+|++.|+.++|++||++|++
T Consensus 45 g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad--in-------~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad--------- 106 (154)
T d1dcqa1 45 DETALHLAVRSVDRTSLHIVDFLVQNSGN--LD-------KQTGKGSTALHYCCLTDNAECLKLLLRGKAS--------- 106 (154)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCSC--TT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCchHHHHHHhcCCCCHHHHHHHHHcCCC--hh-------hhhhhhccccccccccccccccccccccCcc---------
Confidence 4689999996 4789999999998754 32 3367799999999999999999999999875
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
+|.+|..|+||||+|+.+++.+ ++++|++.
T Consensus 107 ---------------~~~~d~~g~tpL~~A~~~~~~~-i~~~L~~~ 136 (154)
T d1dcqa1 107 ---------------IEIANESGETPLDIAKRLKHEH-CEELLTQA 136 (154)
T ss_dssp ---------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHH
T ss_pred ---------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHHh
Confidence 5788999999999999998766 99999863
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.5e-14 Score=130.92 Aligned_cols=87 Identities=20% Similarity=0.102 Sum_probs=70.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
++||+||.+|+.++|++||++|+| +|.+|..|+||||+|+ .++.| ++++|++.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d------------------------~n~~d~~g~TpL~~A~-~~~~e-i~~~Ll~~- 55 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVN------------------------VNAQNGFGRTALQVMK-LGNPE-IARRLLLR- 55 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCC------------------------TTCCCTTSCCHHHHCC-SSCHH-HHHHHHHT-
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC------------------------cCccCCcccccccccc-ccccc-cccccccc-
Confidence 899999999999999999999875 5677888888888776 45655 88888764
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKI 750 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~ 750 (865)
+++++.+|.+|.|||++|+..++..+++.|+++.
T Consensus 56 -----~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 89 (156)
T d1ihba_ 56 -----GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 89 (156)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred -----ccccccccccCccccccccccccccccccccccc
Confidence 3677888888888888888888888888777653
|
| >d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa-promoter binding-like protein 12, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.39 E-value=1.5e-14 Score=117.99 Aligned_cols=31 Identities=84% Similarity=1.398 Sum_probs=30.1
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCcccc
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFD 31 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd 31 (865)
.|+||+.|+|+|++|||||||+|||+|+|||
T Consensus 28 ~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD 58 (58)
T d1wj0a_ 28 IHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58 (58)
T ss_dssp HHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred HhcCCCeEEECCcccccccccCCcccccccC
Confidence 4999999999999999999999999999998
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=7.1e-13 Score=122.75 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=94.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhc-CCCCCC-C--CCch------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChH
Q 002922 632 GLLHKAVRRNCRPMVELLLNY-APDNVL-D--KPGS------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 701 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~-Gadi~~-d--g~~~------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e 701 (865)
+.||.||.+|+.++|+.||.. +++++. + |..+ +..+++..... +.+++|..+..|.+|||+|+..++.+
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 82 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLK-QGASPNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence 569999999999999999975 666652 2 2221 22333332111 24678999999999999999998766
Q ss_pred HHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHh--hhhcCCCCCceEeecC
Q 002922 702 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK--INKKSSESGRVILDIP 765 (865)
Q Consensus 702 ~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K--~~~~~~~~~~v~l~i~ 765 (865)
+++.+++. ++++|.+|.+|.||||+|++.|+.+++++|+.+ ++.+. .+|.|+|+++
T Consensus 83 -~~~~~l~~------~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~~~~~~~~~d-~~G~TpL~~A 140 (156)
T d1bd8a_ 83 -TLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRD-ARGLTPLELA 140 (156)
T ss_dssp -HHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCC-TTSCCHHHHH
T ss_pred -cccccccc------ccccccccCCCCeeeccccccccccccccccccccccccC-CCCCCHHHHH
Confidence 99999774 467899999999999999999999999999865 33344 5777887775
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.33 E-value=6.3e-13 Score=136.47 Aligned_cols=80 Identities=18% Similarity=-0.016 Sum_probs=67.2
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC------h
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD------A 700 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~------~ 700 (865)
|..|+||||+|+..|+.+||++||++|+| ++.+|..|+||||+|+..++ .
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad------------------------~~~~d~~G~TpL~~A~~~~~~~~~~~~ 159 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSN------------------------RLYGDNMGESCLVKAVKSVNNYDSGTF 159 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTBCCTTCCCHHHHHHHSSHHHHTTCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------------CCcCCcccccHHHHhhhcccchhhhhH
Confidence 56799999999999999999999999875 67889999999999997543 3
Q ss_pred HHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002922 701 ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739 (865)
Q Consensus 701 e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn 739 (865)
++++++|.. .++.+|..|+||||+|+..++
T Consensus 160 ~~ll~~l~~---------~~~~~d~~g~t~lh~~~~~~~ 189 (301)
T d1sw6a_ 160 EALLDYLYP---------CLILEDSMNRTILHHIIITSG 189 (301)
T ss_dssp HHHHHHHGG---------GGGEECTTCCCHHHHHHHHHT
T ss_pred HHHHHHHhh---------hhhhcccccCCHHHHHHHHhC
Confidence 457777643 357899999999999997655
|
| >d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: E-set domains of sugar-utilizing enzymes domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D species: Bacillus stearothermophilus [TaxId: 1422]
Probab=83.74 E-value=2.6 Score=34.14 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=51.5
Q ss_pred cceeeeeeceeeecCceeEEEEEeccCCCCCceEEEEecCceeEEEeeccccCCCCcccccCcceeecccCCCCC-CCCc
Q 002922 418 SCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPN-VFGR 496 (865)
Q Consensus 418 ~p~i~~V~P~av~ag~~~~~~v~G~NL~~p~~rlLc~~~GkYl~~e~~~~~~~g~~~~~~~~~~~~~~f~~~~P~-~~G~ 496 (865)
.|.|.+|.|..-.+| ..+.+.|.|+.....+ |.++|.-.. +... ...+|.|. .|. ..|.
T Consensus 3 ~P~I~si~P~~g~~G--t~VtI~G~~F~~~~~~--v~~g~~~~~--v~~~---------s~t~I~c~-----vP~~~~g~ 62 (81)
T d1qhoa1 3 APQIGSVAPNMGIPG--NVVTIDGKGFGTTQGT--VTFGGVTAT--VKSW---------TSNRIEVY-----VPNMAAGL 62 (81)
T ss_dssp SCEEEEEESSEECTT--CEEEEEEECCCSSCCE--EEETTEECC--EEEE---------CSSEEEEE-----CCSCCCEE
T ss_pred CCEEeEEECCCCCCC--CEEEEEEECCCCCCeE--EEECCEEEE--EEEE---------CCCEEEEE-----eCCCCCce
Confidence 479999999877644 6799999999754443 556664322 2211 13455554 443 3577
Q ss_pred eEEEEecCCccCCceeEEe
Q 002922 497 GFIEVEDHGLSSSFVPFIV 515 (865)
Q Consensus 497 ~fIEVE~~g~~S~~~P~lV 515 (865)
.-|.|..+|..++.+.|-|
T Consensus 63 ~~v~V~~~g~~s~~~~F~V 81 (81)
T d1qhoa1 63 TDVKVTAGGVSSNLYSYNI 81 (81)
T ss_dssp EEEEEEETTEECCCEEEEE
T ss_pred EEEEEEECCEEcccEEeEC
Confidence 7889998888888877643
|
| >d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain domain: Calmodulin binding transcription activator 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.15 E-value=2.7 Score=34.02 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=48.7
Q ss_pred eeeeeceeeecCceeEEEEEeccCCCCCceEEEEecCceeEEEeeccccCCCCcccccCcceeecccCCCCCCCCceEEE
Q 002922 421 ISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGFIE 500 (865)
Q Consensus 421 i~~V~P~av~ag~~~~~~v~G~NL~~p~~rlLc~~~GkYl~~e~~~~~~~g~~~~~~~~~~~~~~f~~~~P~~~G~~fIE 500 (865)
|..|+|-.=.....+.+.|.|.|+.. +..+-|+|++......+.. ...+.|.. +|...|.+-||
T Consensus 2 It~isP~~G~~~GGt~V~I~G~~f~~-~~~~~c~fG~~~~~~~~vs-----------~~~i~C~t----P~~~~G~v~v~ 65 (82)
T d2cxka1 2 VTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASLIQ-----------PGVLRCYC----PAHDTGLVTLQ 65 (82)
T ss_dssp CCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEEEE-----------TTEEEEEC----CCCCSEEEEEE
T ss_pred EeEEcCCceeCCCCEEEEEEEccccc-cceEEEEEEeeecceEEEe-----------eeEEEEEc----CcccceeEEEE
Confidence 67899988888899999999999964 5679999987543332211 23455552 23446888888
Q ss_pred EecCC
Q 002922 501 VEDHG 505 (865)
Q Consensus 501 VE~~g 505 (865)
|-.+|
T Consensus 66 Vs~ng 70 (82)
T d2cxka1 66 VAFNN 70 (82)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 88766
|