Citrus Sinensis ID: 002955

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860---
MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQDACKASLGSQRVVINKE
ccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEECccccEEEEcccccccEEEcccccHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHccccCEEEcccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHcHHHHHHHcccccEEEEEEccccccHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccCCcccccEEEEEEcccEEEEEEEEccccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccHHHHHHHHHHccEEEEcccccccccccEEEEEEEccccccccccccccccccccEEEEEcccccccccccccEEccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHcccccCEEEEcccEEEEcccccccEECcccccccHHHHHHHHHHHHHccccccEEEEEcEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEcccccHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHcccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccc
*****YSNLLDLA************************************************IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG******EVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP*TAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEAS*******************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQDACKASLGSQRVVINKE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 confidentO23617
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes.probableQ94AH8
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination.probableQ54K57

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.15Alpha,alpha-trehalose-phosphate synthase (UDP-forming).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3T5T, chain A
Confidence level:very confident
Coverage over the Query: 60-456,473-552
View the alignment between query and template
View the model in PyMOL
Template: 3MPO, chain A
Confidence level:confident
Coverage over the Query: 592-599,614-807,818-838
View the alignment between query and template
View the model in PyMOL