Citrus Sinensis ID: 002955
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 863 | 2.2.26 [Sep-21-2011] | |||||||
| O23617 | 862 | Alpha,alpha-trehalose-pho | yes | no | 0.976 | 0.977 | 0.826 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.973 | 0.976 | 0.728 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.967 | 0.981 | 0.670 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.977 | 0.973 | 0.650 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.968 | 0.976 | 0.633 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.977 | 0.980 | 0.624 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.965 | 0.966 | 0.596 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.826 | 0.972 | 0.339 | 1e-135 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.852 | 0.895 | 0.353 | 1e-127 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.804 | 0.736 | 0.361 | 1e-126 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1489 bits (3854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/846 (82%), Positives = 779/846 (92%), Gaps = 3/846 (0%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDEN-SNSVGSDAPSSVSQE 59
MVSRSYSNLLDLASG+F +FSREKKR PRVATV GVLSE+DD+N SNSV SDAPSSV+Q+
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+IIVGNQLP+++HR+S +G +FSWD DSLLLQLKDG+ ED+EV+Y+GC+KEQID E
Sbjct: 61 RIIIVGNQLPIKSHRNS--AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVE 118
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
QD+VSQ LLE FKCVPA+IPPELF+K+YHGFCKQHLWPLFHYMLPL+PDLGGRFDRSLWQ
Sbjct: 119 QDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQ 178
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
AY+SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI
Sbjct: 179 AYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 238
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
YRTLP+R+ELLRALLNADLIGFHTFDYARHFLSCCSRMLG+SYQSKRG IGLEY+GRTVS
Sbjct: 239 YRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVS 298
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
IKILPVGIHI QLQS+LNLPET+ KVAEL+DQF Q V+LGVDDMDIFKGISLKLLAMEQ
Sbjct: 299 IKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQ 358
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
LL+Q+P KRG++VLVQIANPARGRG+DVQEVQSET ATV+RIN++FGRPGYQPVVLIDTP
Sbjct: 359 LLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTP 418
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
LQF+ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN KL+ T+GLDPS AK SMLVV
Sbjct: 419 LQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVV 478
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF+GCSPSLSGAIRVNPWNIDAV EAMD AL VS+AEKQMRHEKH++YVSTHDVAYWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWAR 538
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
SF+QDLERAC DH+R+RCWGIGFGLGFRVVALDP+F+KLSI+HIVSAYKRTKNRAILLDY
Sbjct: 539 SFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDY 598
Query: 600 DGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659
DGT++ PGSI T+P E + IL+NL DPKN+V+LVSGKDR TL EWFSSC+ LG+ AEH
Sbjct: 599 DGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEH 658
Query: 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPD 719
GYF+RPN G DWET V F WKQIAEPVM+LYTETTDGSTIETKE+ALVWN+Q+ADPD
Sbjct: 659 GYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPD 718
Query: 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDF 779
FGSCQAKEL++HLESVL N+PVSVK+G +VEVKPQGVNKGLVA+ L TM +KG L DF
Sbjct: 719 FGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDF 778
Query: 780 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLG 839
+LC+GDDRSDEDMFEVI SA GP+LSPVAE+FACTVGQKPSKAKYYLDDTAEI+RML G
Sbjct: 779 ILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDG 838
Query: 840 LAEASA 845
LA +
Sbjct: 839 LAATNT 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1338 bits (3462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/862 (72%), Positives = 747/862 (86%), Gaps = 22/862 (2%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
MVSRSYSNLL+LASGD P F R +++PR+ VAG++S ID+++ ++ S ++R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLS------PKDR 54
Query: 61 MIIVGNQLPLRAHRSSDGS------------GGWTFSWDEDSLLLQLKDGLG-EDVEVIY 107
+IIV N+LP+RA R DG+ GW FSWDE+SLLLQLKDGLG E +EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 108 VGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSP 167
VGC+KE+I L+EQ+EV Q LLE+FKCVP F+P +L++++YHGFCKQ LWPLFHYMLPLSP
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 168 DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLG 227
DLGGRFDR+LWQAYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 228 FFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRG 287
FFLHSPFPSSEIY+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG++Y+SKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 288 YIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD 345
YIGLEY+GRTVSIKILPVGIH+GQLQSVL+LPETE KV EL +++ KG+ ++LGVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIF 405
IFKGI+LKLLAMEQLL Q+P +GK+VLVQIANPARG+G+DV+E+Q+ET++TV+RIN+ F
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 406 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTL 465
GRPGY P+VLID PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYI+ RQGNEKLD L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 466 GLDPSTA-KSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 524
L+ + K SMLVVSEF+GCSPSLSGAIRVNPWN+DAVA+AMDSAL V++ EKQ+RHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 525 HYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIV 584
HY+YVSTHDV YWARSFLQDLER+C +H RRRCWGIGFGL FRVVALD +FRKLS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644
SAYKRTK RAILLDYD T+M GSI P+++++ IL+ LCRD N+VF+VS K R+TL+
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 645 EWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET 704
+WFS CE LGIAAEHGYF+R V+WE CV+ D SWKQIAEPVM+LYTETTDGSTIE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 705 KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 764
KE+ALVW+++ ADPDFGSCQAKELLDHLESVLANEPV+VK G N VEVKPQGV+KGL+A+
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 765 HQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 824
L M ++G LP+FVLCIGDDRSDEDMFEVI S+ GPS++P AE+FACTVGQKPSKAK
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 825 YYLDDTAEILRMLLGLAEASAQ 846
YYLDDT EI+R++ GLA + Q
Sbjct: 835 YYLDDTTEIVRLMHGLASVTDQ 856
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/846 (67%), Positives = 689/846 (81%), Gaps = 11/846 (1%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M+SRSY+NLLDLASG+FP RE++RLPRV TV G +SE D++ + SV SD PSSVS +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
MIIV N+LPL+A + + G W+FSWD+DSL LQLKDGL ED+E++YVG + +D +EQ
Sbjct: 61 MIIVANRLPLKAEKRN---GSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQ 117
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
D+V+Q LL+ FKCVP F PP+L SKFY GFCK+ +WPLFHYMLP S D GGRFDRSLW+A
Sbjct: 118 DDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEA 177
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YV+ NK+F KV+EVI+PDDDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSEIY
Sbjct: 178 YVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIY 237
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
R+LP+R+E+L+ALLN+DLIGFHTFDYARHFL+CCSRMLG+ YQSKRGYIGLEY+GRTV I
Sbjct: 238 RSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGI 297
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KI+PVGI++G++QSV+ E E KV EL+++F+G+ V+LG+DDMDIFKGI+LKLLAMEQ+
Sbjct: 298 KIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQM 357
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
L Q+P+ RG+ VLVQI NPARG+G DV+E++ E + RRIN FG+PGYQP++ IDTP+
Sbjct: 358 LRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPV 417
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLG--LDPSTAKSSMLV 478
E AYY IAEC +VTAVRDGMNL PYEYI+CRQG LG D S K SMLV
Sbjct: 418 SINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLV 471
Query: 479 VSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538
SEF+GCSPSLSGAIRVNPWN++A EA++ AL +SDAEKQ+RHEKH+RYVSTHDVAYW+
Sbjct: 472 ASEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWS 531
Query: 539 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLD 598
RSFLQDLER C DH ++RCWG+G GFRVVALDPNFRKLSI IVS YKR K+RAILLD
Sbjct: 532 RSFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLD 591
Query: 599 YDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 658
YDGT+M SI+ +P+ E + LD LC D KN +F+VSG+ R++L++WF+ C+ +GIAAE
Sbjct: 592 YDGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAE 651
Query: 659 HGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP 718
HGYF++ + +WETC DF W QI EPVMK YTE+TDGS+IE KESALVW ++ ADP
Sbjct: 652 HGYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADP 711
Query: 719 DFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 778
FGS QAKE+L+HLESVLANEPV+VKSG IVEVKPQGV+KG V++ +M KG D
Sbjct: 712 GFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVD 771
Query: 779 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838
FVLCIGDDRSDEDMFE I +A + L A VFACTVGQKPSKAKYYLDDT E+ ML
Sbjct: 772 FVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLE 831
Query: 839 GLAEAS 844
LAEAS
Sbjct: 832 SLAEAS 837
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1182 bits (3057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/845 (65%), Positives = 678/845 (80%), Gaps = 1/845 (0%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
MVSRS +N LDLAS D +F + ++ LPRV TV G++SE+D S+ S+ S+ER
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
IIV N LPL+A R ++ +G W FSWDEDSLLLQL+DG D E +Y+G + I +SEQ
Sbjct: 61 KIIVANMLPLQAKRDTE-TGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQ 119
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
+EVS LL F CVP F+P E+ KFY GFCK HLWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 EEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQA 179
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YVS NKIF+D+VMEVI+P++D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 180 YVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+RD+LLR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV I
Sbjct: 240 RTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFI 299
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILPVGIH+G+L+SVLNLP T AK+ E+Q+QFKG+ ++LGVDDMDIFKGISLKL+AME+L
Sbjct: 300 KILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERL 359
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
RGK+VL+QI NPAR G+DV+E + ET++T +RIN+ +G GYQPV+LID +
Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLV 419
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480
YE+ AYY +A+CCLV AVRDGMNL+PY+YIICRQG +D +G+ +A++SMLVVS
Sbjct: 420 PRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVS 479
Query: 481 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540
EF+GCSPSLSGAIRVNPW++DAVAEA++ AL + + EK++RHEKHY YVSTHDV YWA+S
Sbjct: 480 EFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKS 539
Query: 541 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 600
F+QDLERACR+H +RCWGIGFGL FRV++L P+FRKLSIDHIVS Y+ T+ RAI LDYD
Sbjct: 540 FMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYD 599
Query: 601 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660
GT++ SI +PNAE +++L +LC DPKN VF+VSG+ ++L++W S CE LGIAAEHG
Sbjct: 600 GTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHG 659
Query: 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 720
YF+R + +WETC S + WK + EPVM+ Y + TDGSTIE KESALVW+ Q ADPDF
Sbjct: 660 YFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDF 719
Query: 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780
G+CQAKELLDHLESVLANEPV VK G +IVEVKPQGV+KGL + + M + G PD V
Sbjct: 720 GACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMV 779
Query: 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
+CIGDDRSDEDMFE I S P L E+FACTVG+KPSKAKY+LDD +++L++L GL
Sbjct: 780 MCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGL 839
Query: 841 AEASA 845
A A++
Sbjct: 840 AAATS 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/842 (63%), Positives = 658/842 (78%), Gaps = 6/842 (0%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
MVSRS +N LDL+S D +F + + LPRV TV G+++++D + ++ V S S S+ER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSRER 58
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
IIV N LPL++ R ++ +G W F+WDEDSL LQL+DG + E +YVG + I+ +EQ
Sbjct: 59 KIIVANMLPLQSKRDAE-TGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQ 117
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
+EVSQ LLE F CV F+ EL FY GFCK LWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 118 EEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQA 177
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YVS NKIF+D+VMEVI+P+DD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 178 YVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 237
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+RDE+LR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV I
Sbjct: 238 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 297
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILPVG+H+G+L+SVL+L T AK E+Q+QFKG+ ++LG+DDMDIFKGISLKL+AME L
Sbjct: 298 KILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHL 357
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
+GK+VLVQI NPAR G+DV+E + ET+ T RRIN+ +G Y+P+VLID +
Sbjct: 358 FETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLV 417
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480
E+ AYY A+CCLV AVRDGMNL+PY+YI+CRQG + P T S LVVS
Sbjct: 418 PRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSSPRT---STLVVS 474
Query: 481 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540
EF+GCSPSLSGAIRVNPW++DAVAEA++SAL +S+ EKQ+RHEKHY Y+STHDV YWA+S
Sbjct: 475 EFIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKS 534
Query: 541 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 600
F+QDLERACRDH +RCWGIGFGLGFRV++L P+FRKLS++HIV Y++T+ RAI LDYD
Sbjct: 535 FMQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYD 594
Query: 601 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660
GT++ SI P+ E V++L LC DP N VF+VSG+ R++L+ W S CE LGIAAEHG
Sbjct: 595 GTLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHG 654
Query: 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 720
YF+R +WETC S D W+ + EPVM+ Y E TDG++IE KESALVW+ Q ADPDF
Sbjct: 655 YFIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDF 714
Query: 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780
GSCQAKE+LDHLESVLANEPV VK G +IVEVKPQGV+KGL A+ + M ++G P+ V
Sbjct: 715 GSCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMV 774
Query: 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
+CIGDDRSDEDMFE I S P L EVFACTVG+KPSKAKY+LDD A++L++L GL
Sbjct: 775 MCIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGL 834
Query: 841 AE 842
+
Sbjct: 835 GD 836
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/845 (62%), Positives = 659/845 (77%), Gaps = 1/845 (0%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M S+S+ NLLDLASGD + + + LPRV TV G++S++D + SD S +ER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
IIV N LPL + S+ +G W FS D DS LL LKDG + EVIYVG +K +D+SEQ
Sbjct: 61 KIIVANFLPLNGKKDSE-TGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQ 119
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
DEVS L E F CV F+P ++ KFY GFCKQ LWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQA 179
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YVS NKIFADKVM VI+ ++D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIY
Sbjct: 180 YVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+R+ELLR LLN DLIGFHTFDYARHFLSCC RMLG+ Y+SKRG+I L+Y GRTV +
Sbjct: 240 RTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFL 299
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILP+GIH+G+L+SVLNLP T K+ E+Q++++G+ ++LGVDDMDIFKG+SLK+LA E L
Sbjct: 300 KILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHL 359
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
L Q PS GKIVL+QI NPARG G+DVQE + ET+ TV+RIN+ +G Y+PVVLID P+
Sbjct: 360 LQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPV 419
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480
+E+ AYY +AECC+V AVRDGMNL+PY+Y +CRQG ++ +LG+ ++S LV+S
Sbjct: 420 PRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLS 479
Query: 481 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540
EF+GCSPSLSGAIRVNPW++DAVA+++ SA+ +SD EKQ+RH+KH+ Y+STHDV YWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARS 539
Query: 541 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 600
F QDLERA RDH +RCWG+G+GLGFR+VAL PNFR+LSI+ VSAY+R+ RAI LDYD
Sbjct: 540 FSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYD 599
Query: 601 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660
GT++ SI P+AE ++ L LC DP N +F+VSG+ + +L+EW + CE LGIAAEHG
Sbjct: 600 GTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHG 659
Query: 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 720
YF R N DWET D WK++ EP+M+LYTETTDGS IE KESALVW+ Q ADPDF
Sbjct: 660 YFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDF 719
Query: 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780
GSCQAKELLDHLE+VL NEPV V G IVEVKPQGV+KGLV L M + G+ PDFV
Sbjct: 720 GSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFV 779
Query: 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
+CIGDDRSDE+MFE I + + S S E+FACTVG+KPSKAKY+LD+ ++++++L GL
Sbjct: 780 VCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGL 839
Query: 841 AEASA 845
A S+
Sbjct: 840 ANTSS 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/846 (59%), Positives = 633/846 (74%), Gaps = 13/846 (1%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M S+ + L L S D + R+P T L E DD N + V++ +
Sbjct: 1 MSPESWKDQLSLVSADDYRI-MGRNRIPNAVTKLSGL-ETDDPNGGAW-------VTKPK 51
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
I+V NQLPLRAHR S W F +D DSL LQLKDG + EV+YVG + + SEQ
Sbjct: 52 RIVVSNQLPLRAHRDI-SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQ 110
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
++VSQ LLE F+CVP F+P +L +K+YHGFCK +LWP+FHY+LP++ G FDRS W+A
Sbjct: 111 EDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRA 170
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
Y +VNKIFADK+ EV++PDDD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFPSSEIY
Sbjct: 171 YTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIY 230
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+RDE+L+ LN DL+GFHTFDYARHFLSCCSRMLG+ Y+SKRGYIGLEYFGRTVSI
Sbjct: 231 RTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSI 290
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILPVGIH+GQ++S+ +T KV L+++FKG IVMLGVDD+D+FKGISLK AM QL
Sbjct: 291 KILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQL 350
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP-GYQPVVLIDTP 419
L QN RGK+VLVQI NPAR G+DVQ+V+ + + IN FGRP GY+P+V I+ P
Sbjct: 351 LEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGP 410
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ +++AYY I+EC +V AVRDGMNL+PY+Y + RQG+ LD LG + S+++V
Sbjct: 411 VSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIV 470
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF+GCSPSLSGAIRVNPWNIDAV AM SA+ +SD EK +RH+KH++Y+S+H+VAYWAR
Sbjct: 471 SEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWAR 530
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
S+ QDL+RAC+DH +R WG+GFGL F+VVALDPNFR+L + IV AY+R+ +R ILLDY
Sbjct: 531 SYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDY 590
Query: 600 DGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659
DGT+M ++ P+ + +++L+ LC DP N+VF+VSG+ +D L++WF SC LGI+AEH
Sbjct: 591 DGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEH 650
Query: 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPD 719
GYF R N WET D SWK+IA+PVM Y E TDGS IE KESA+VW+ Q AD
Sbjct: 651 GYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHS 710
Query: 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM-HQKGMLPD 778
FGS QAKELLDHLESVL NEPV VK G +IVEVKPQGV+KG V +H + TM + KG PD
Sbjct: 711 FGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPD 770
Query: 779 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838
F+LCIGDDRSDEDMF+ I S+ + EVFACTVGQKPSKAKYYLDDT +++ML
Sbjct: 771 FLLCIGDDRSDEDMFDSIVKHQDVSSIG-LEEVFACTVGQKPSKAKYYLDDTPSVIKMLE 829
Query: 839 GLAEAS 844
LA AS
Sbjct: 830 WLASAS 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/784 (33%), Positives = 434/784 (55%), Gaps = 71/784 (9%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+I+V N+LP+ + S+G W+ L+ L G I+VG I +I+ +
Sbjct: 17 RLIVVSNRLPVSIKKESNGK--WSCKMSSGGLVAALS---GLKSNFIWVGWIGAEIEEDD 71
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
+ E+ + L + + C+P F+ ++ ++ Y+GF LWPLFHY LP D +D +W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWN 126
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
+YV N+ F+ V E++ P+D VWVHDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPND-LVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
+R LP R E+L +LN LIGFHT+DYARHFL C+R++G+ G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQ 241
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
+ + PVGI + L + + ++ EL++ F+G V++G+D +D KGI KL A+E+
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIER 301
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
L + P +GK+VL+Q+A P+R + Q+++ E V RIN ++G GY P+ +
Sbjct: 302 LFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQS 361
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ E A Y I++ L+T++RDGMNL+ EYI+C+ T + +L++
Sbjct: 362 VDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------------TENNGVLIL 406
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF G + SLSGA+ +NPWN + VA+++ ++L + E++ +H+ +YV+ H ++W
Sbjct: 407 SEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGL 466
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
F+++L +A + + +KL I+ +V YK++K R ++ Y
Sbjct: 467 GFVKELNKASSNTDKMVT-----------------IQKLDIEKVVDIYKQSKRRLLIFAY 509
Query: 600 DGTIMVPGSIS--TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 657
DGT++ ++ + P+ E + D L DPK V+++SG+D+ TL+EWF + +G++A
Sbjct: 510 DGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSA 568
Query: 658 EHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYAD 717
E+G F + +WE V D SWK+ P+ K +T T GS E KE W+++ AD
Sbjct: 569 EYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNAD 628
Query: 718 PDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP 777
P FGS QA+EL HL+ N P+ V G + V+ +N + + KG+
Sbjct: 629 PIFGSIQARELHLHLD----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKGL-- 682
Query: 778 DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPV--AEVFACTVGQKPSKAKYYLDDTAEILR 835
D +L IGD PS P ++F +VG+K K Y+L D AE+
Sbjct: 683 DLILLIGD-------------THIHPSELPTFDGKIFNISVGKKSVKDSYHLSDPAEVNY 729
Query: 836 MLLG 839
+++
Sbjct: 730 LIIN 733
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/806 (35%), Positives = 437/806 (54%), Gaps = 70/806 (8%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQI-DLS 118
R+++V N+LP+ A R+ G W+ L+ L G+ + +VG + D
Sbjct: 13 RLLVVANRLPVSAKRT--GENSWSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEI 69
Query: 119 EQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSP--DLGGRFDR 175
E++ ++++L E KC+P F+ +F ++Y+G+C LWP+ H+M LP D F+
Sbjct: 70 EKNALTESLAE-MKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFE- 126
Query: 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP 235
+ + AY N++F D +++ + D VW HDYHLM LP +L++ N++K+G+FLHSPFP
Sbjct: 127 TQYDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFP 185
Query: 236 SSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFG 295
SSE+Y+TLP R ELLRA+L ADL+GFHT+D+ARHFLS C+R+LGV + G+ Y G
Sbjct: 186 SSEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE----GVVYQG 241
Query: 296 RTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLL 355
R + + P+GI + LPE ++ ELQ++F G+ V+LGVD +D+ KGI K L
Sbjct: 242 RVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYL 301
Query: 356 AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415
A E+ L +NP R K+VLVQIA P R + ++++S+ H V RIN FG P+
Sbjct: 302 AFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHH 361
Query: 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 475
+D + F A Y IA+ LVT++RDGMNL+ YE++ C++ AK
Sbjct: 362 LDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQE---------------AKKG 406
Query: 476 MLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDV 534
+LV+SEF G SL GA+ VNPW++ V+ A+ AL + E++ RH +++YV TH
Sbjct: 407 VLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSA 466
Query: 535 AYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRA 594
W F+ +L + + R + L +L ++ Y ++ NR
Sbjct: 467 EKWGLDFMSELNGIIPESE----------MQMRKIPL-----QLPEQDVIQQYSQSNNRL 511
Query: 595 ILLDYDGTIMVPGSISTSP-----NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649
I+L + GT+ P + T N E L LC DPK V ++S ++ L + F
Sbjct: 512 IILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGE 571
Query: 650 CEGLGIAAEHGYFVRPNYGVDWETCVSVP---DFSWKQIAEPVMKLYTETTDGSTIETKE 706
+ +AAE+G F + G +W T ++P + W + V K +T+ T S E E
Sbjct: 572 S-NIWLAAENGMFEKQTTG-EWVT--NMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASE 627
Query: 707 SALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQH 765
++LVWN++YAD +FG QA++LL +L ++N V V G + VEV G KG
Sbjct: 628 TSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGR 687
Query: 766 QL-ETMHQKGMLP--DFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVA------EVFACT 815
L E +H+K M DFV C G DED++ +S S SP F+
Sbjct: 688 ILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILS-SKSPNGLDLKKENYFSAA 746
Query: 816 VGQKPSKAKYYLDDTAEILRMLLGLA 841
+GQ +KA+Y +D ++ +L LA
Sbjct: 747 IGQARTKARYVIDSAHGVVDLLHKLA 772
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/759 (36%), Positives = 420/759 (55%), Gaps = 65/759 (8%)
Query: 57 SQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGCIKEQI 115
+++R+++V N+LP+ A R G W+ L+ L LG ++ E ++G +
Sbjct: 90 NRQRLLVVANRLPVSAVRR--GEDSWSLEISAGGLVSAL---LGVKEFEARWIGWAGVNV 144
Query: 116 -DLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG-R 172
D Q +S+ L E +C+P F+ E+ ++Y+G+C LWPLFHY+ LP L R
Sbjct: 145 PDEVGQKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 203
Query: 173 FDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS 232
+S + AY N++FAD V E + D VW HDYHLM LP L++ +++K+G+FLH+
Sbjct: 204 SFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHT 262
Query: 233 PFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE 292
PFPSSEI+RTLP R ELLR++L ADL+GFHT+DYARHF+S C+R+LG+ + G+E
Sbjct: 263 PFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVE 318
Query: 293 YFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISL 352
GR + P+GI + L +PE + EL+++F G+ VMLGVD +D+ KGI
Sbjct: 319 DQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQ 378
Query: 353 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412
K+LA E+ L +N + R K+VL+QIA P R + Q++ S+ H V RIN FG P
Sbjct: 379 KILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVP 438
Query: 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTA 472
+ +D L F+ A Y + + LVT++RDGMNL+ YE++ C++ A
Sbjct: 439 IHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQE---------------A 483
Query: 473 KSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531
K +L++SEF G + SL +GAI VNPWNI VA ++ AL ++ E++ RH ++ +V T
Sbjct: 484 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKT 543
Query: 532 HDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTK 591
H WA +F+ +L + R+ + P +L + Y ++
Sbjct: 544 HTAQEWAETFVSELNDTVIEAQ------------LRISKVPP---ELPQHDAIQRYSKSN 588
Query: 592 NRAILLDYDGTIMVP-----------GSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDR 640
NR ++L ++ T+ P + + + E L LC DP + ++SG R
Sbjct: 589 NRLLILGFNATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSR 648
Query: 641 DTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVP-DFSWKQIAEPVMKLYTETTDG 699
L + F + + +AAE+G F+R G +W T + + W + V K +TE T
Sbjct: 649 SVLDKNFGEYD-MWLAAENGMFLRLTNG-EWMTTMPEHLNMEWVDSVKHVFKYFTERTPR 706
Query: 700 STIETKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVN 758
S ET++++L+WN++YAD +FG QA++LL HL ++N V V G VEV+ GV
Sbjct: 707 SHFETRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVT 766
Query: 759 KGLVAQHQL-ETMHQKGMLP--DFVLCIGDD-RSDEDMF 793
KG L E +H K M D+VLCIG DED++
Sbjct: 767 KGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVY 805
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 863 | ||||||
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.972 | 0.973 | 0.830 | 0.0 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.973 | 0.976 | 0.729 | 0.0 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.967 | 0.981 | 0.670 | 6.10000002384e-316 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.976 | 0.972 | 0.653 | 9.20000000001e-313 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.972 | 0.980 | 0.631 | 1.1e-300 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.977 | 0.980 | 0.624 | 1.6e-299 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.965 | 0.966 | 0.596 | 4.6e-279 | |
| DICTYBASE|DDB_G0284975 | 790 | tpsB "alpha,alpha-trehalose-ph | 0.492 | 0.537 | 0.356 | 1.5e-125 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.764 | 0.830 | 0.341 | 3.5e-107 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.390 | 0.371 | 0.352 | 1.2e-104 |
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3739 (1321.3 bits), Expect = 0., P = 0.
Identities = 699/842 (83%), Positives = 778/842 (92%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDEN-SNSVGSDAPSSVSQE 59
MVSRSYSNLLDLASG+F +FSREKKR PRVATV GVLSE+DD+N SNSV SDAPSSV+Q+
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+IIVGNQLP+++HR+S +G +FSWD DSLLLQLKDG+ ED+EV+Y+GC+KEQID E
Sbjct: 61 RIIIVGNQLPIKSHRNS--AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVE 118
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
QD+VSQ LLE FKCVPA+IPPELF+K+YHGFCKQHLWPLFHYMLPL+PDLGGRFDRSLWQ
Sbjct: 119 QDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQ 178
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
AY+SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI
Sbjct: 179 AYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 238
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
YRTLP+R+ELLRALLNADLIGFHTFDYARHFLSCCSRMLG+SYQSKRG IGLEY+GRTVS
Sbjct: 239 YRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVS 298
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
IKILPVGIHI QLQS+LNLPET+ KVAEL+DQF Q V+LGVDDMDIFKGISLKLLAMEQ
Sbjct: 299 IKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQ 358
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
LL+Q+P KRG++VLVQIANPARGRG+DVQEVQSET ATV+RIN++FGRPGYQPVVLIDTP
Sbjct: 359 LLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTP 418
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
LQF+ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN KL+ T+GLDPS AK SMLVV
Sbjct: 419 LQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVV 478
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF+GCSPSLSGAIRVNPWNIDAV EAMD AL VS+AEKQMRHEKH++YVSTHDVAYWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWAR 538
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
SF+QDLERAC DH+R+RCWGIGFGLGFRVVALDP+F+KLSI+HIVSAYKRTKNRAILLDY
Sbjct: 539 SFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDY 598
Query: 600 DGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659
DGT++ PGSI T+P E + IL+NL DPKN+V+LVSGKDR TL EWFSSC+ LG+ AEH
Sbjct: 599 DGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEH 658
Query: 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPD 719
GYF+RPN G DWET V F WKQIAEPVM+LYTETTDGSTIETKE+ALVWN+Q+ADPD
Sbjct: 659 GYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPD 718
Query: 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDF 779
FGSCQAKEL++HLESVL N+PVSVK+G +VEVKPQGVNKGLVA+ L TM +KG L DF
Sbjct: 719 FGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDF 778
Query: 780 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLG 839
+LC+GDDRSDEDMFEVI SA GP+LSPVAE+FACTVGQKPSKAKYYLDDTAEI+RML G
Sbjct: 779 ILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDG 838
Query: 840 LA 841
LA
Sbjct: 839 LA 840
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3370 (1191.4 bits), Expect = 0., P = 0.
Identities = 629/862 (72%), Positives = 750/862 (87%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
MVSRSYSNLL+LASGD P F R +++PR+ VAG++S ID+++ ++ S P ++R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLS--P----KDR 54
Query: 61 MIIVGNQLPLRAHRSSDGSG------------GWTFSWDEDSLLLQLKDGLGED-VEVIY 107
+IIV N+LP+RA R DG+G GW FSWDE+SLLLQLKDGLG++ +EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 108 VGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSP 167
VGC+KE+I L+EQ+EV Q LLE+FKCVP F+P +L++++YHGFCKQ LWPLFHYMLPLSP
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 168 DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLG 227
DLGGRFDR+LWQAYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 228 FFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRG 287
FFLHSPFPSSEIY+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG++Y+SKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 288 YIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD 345
YIGLEY+GRTVSIKILPVGIH+GQLQSVL+LPETE KV EL +++ KG+ ++LGVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIF 405
IFKGI+LKLLAMEQLL Q+P +GK+VLVQIANPARG+G+DV+E+Q+ET++TV+RIN+ F
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 406 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTL 465
GRPGY P+VLID PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYI+ RQGNEKLD L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 466 GLDPSTA-KSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 524
L+ + K SMLVVSEF+GCSPSLSGAIRVNPWN+DAVA+AMDSAL V++ EKQ+RHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 525 HYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIV 584
HY+YVSTHDV YWARSFLQDLER+C +H RRRCWGIGFGL FRVVALD +FRKLS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644
SAYKRTK RAILLDYD T+M GSI P+++++ IL+ LCRD N+VF+VS K R+TL+
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 645 EWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET 704
+WFS CE LGIAAEHGYF+R V+WE CV+ D SWKQIAEPVM+LYTETTDGSTIE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 705 KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 764
KE+ALVW+++ ADPDFGSCQAKELLDHLESVLANEPV+VK G N VEVKPQGV+KGL+A+
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 765 HQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 824
L M ++G LP+FVLCIGDDRSDEDMFEVI S+ GPS++P AE+FACTVGQKPSKAK
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 825 YYLDDTAEILRMLLGLAEASAQ 846
YYLDDT EI+R++ GLA + Q
Sbjct: 835 YYLDDTTEIVRLMHGLASVTDQ 856
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3030 (1071.7 bits), Expect = 6.1e-316, P = 6.1e-316
Identities = 567/846 (67%), Positives = 689/846 (81%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M+SRSY+NLLDLASG+FP RE++RLPRV TV G +SE D++ + SV SD PSSVS +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
MIIV N+LPL+A + + G W+FSWD+DSL LQLKDGL ED+E++YVG + +D +EQ
Sbjct: 61 MIIVANRLPLKAEKRN---GSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQ 117
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
D+V+Q LL+ FKCVP F PP+L SKFY GFCK+ +WPLFHYMLP S D GGRFDRSLW+A
Sbjct: 118 DDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEA 177
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YV+ NK+F KV+EVI+PDDDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSEIY
Sbjct: 178 YVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIY 237
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
R+LP+R+E+L+ALLN+DLIGFHTFDYARHFL+CCSRMLG+ YQSKRGYIGLEY+GRTV I
Sbjct: 238 RSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGI 297
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KI+PVGI++G++QSV+ E E KV EL+++F+G+ V+LG+DDMDIFKGI+LKLLAMEQ+
Sbjct: 298 KIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQM 357
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
L Q+P+ RG+ VLVQI NPARG+G DV+E++ E + RRIN FG+PGYQP++ IDTP+
Sbjct: 358 LRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPV 417
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGL--DPSTAKSSMLV 478
E AYY IAEC +VTAVRDGMNL PYEYI+CRQG LG D S K SMLV
Sbjct: 418 SINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLV 471
Query: 479 VSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538
SEF+GCSPSLSGAIRVNPWN++A EA++ AL +SDAEKQ+RHEKH+RYVSTHDVAYW+
Sbjct: 472 ASEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWS 531
Query: 539 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLD 598
RSFLQDLER C DH ++RCWG+G GFRVVALDPNFRKLSI IVS YKR K+RAILLD
Sbjct: 532 RSFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLD 591
Query: 599 YDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 658
YDGT+M SI+ +P+ E + LD LC D KN +F+VSG+ R++L++WF+ C+ +GIAAE
Sbjct: 592 YDGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAE 651
Query: 659 HGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP 718
HGYF++ + +WETC DF W QI EPVMK YTE+TDGS+IE KESALVW ++ ADP
Sbjct: 652 HGYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADP 711
Query: 719 DFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 778
FGS QAKE+L+HLESVLANEPV+VKSG IVEVKPQGV+KG V++ +M KG D
Sbjct: 712 GFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVD 771
Query: 779 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838
FVLCIGDDRSDEDMFE I +A + L A VFACTVGQKPSKAKYYLDDT E+ ML
Sbjct: 772 FVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLE 831
Query: 839 GLAEAS 844
LAEAS
Sbjct: 832 SLAEAS 837
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3000 (1061.1 bits), Expect = 9.2e-313, P = 9.2e-313
Identities = 553/846 (65%), Positives = 680/846 (80%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSS-VSQE 59
MVSRS +N LDLAS D +F + ++ LPRV TV G++SE+D S+ SD SS S+E
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDG-SSDVNSSNSSRE 59
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R IIV N LPL+A R ++ +G W FSWDEDSLLLQL+DG D E +Y+G + I +SE
Sbjct: 60 RKIIVANMLPLQAKRDTE-TGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISE 118
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
Q+EVS LL F CVP F+P E+ KFY GFCK HLWPLFHYMLP+ PD G RFDR LWQ
Sbjct: 119 QEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQ 178
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
AYVS NKIF+D+VMEVI+P++D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 238
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
YRTLP+RD+LLR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV
Sbjct: 239 YRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVF 298
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
IKILPVGIH+G+L+SVLNLP T AK+ E+Q+QFKG+ ++LGVDDMDIFKGISLKL+AME+
Sbjct: 299 IKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMER 358
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
L RGK+VL+QI NPAR G+DV+E + ET++T +RIN+ +G GYQPV+LID
Sbjct: 359 LFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRL 418
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ YE+ AYY +A+CCLV AVRDGMNL+PY+YIICRQG +D +G+ +A++SMLVV
Sbjct: 419 VPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVV 478
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF+GCSPSLSGAIRVNPW++DAVAEA++ AL + + EK++RHEKHY YVSTHDV YWA+
Sbjct: 479 SEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAK 538
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
SF+QDLERACR+H +RCWGIGFGL FRV++L P+FRKLSIDHIVS Y+ T+ RAI LDY
Sbjct: 539 SFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDY 598
Query: 600 DGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659
DGT++ SI +PNAE +++L +LC DPKN VF+VSG+ ++L++W S CE LGIAAEH
Sbjct: 599 DGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEH 658
Query: 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPD 719
GYF+R + +WETC S + WK + EPVM+ Y + TDGSTIE KESALVW+ Q ADPD
Sbjct: 659 GYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPD 718
Query: 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDF 779
FG+CQAKELLDHLESVLANEPV VK G +IVEVKPQGV+KGL + + M + G PD
Sbjct: 719 FGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDM 778
Query: 780 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLG 839
V+CIGDDRSDEDMFE I S P L E+FACTVG+KPSKAKY+LDD +++L++L G
Sbjct: 779 VMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGG 838
Query: 840 LAEASA 845
LA A++
Sbjct: 839 LAAATS 844
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2886 (1021.0 bits), Expect = 1.1e-300, P = 1.1e-300
Identities = 534/845 (63%), Positives = 661/845 (78%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
MVSRS +N LDL+S D +F + + LPRV TV G+++++D + ++ V S S S+ER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTST--SGGSRER 58
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
IIV N LPL++ R ++ +G W F+WDEDSL LQL+DG + E +YVG + I+ +EQ
Sbjct: 59 KIIVANMLPLQSKRDAE-TGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQ 117
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
+EVSQ LLE F CV F+ EL FY GFCK LWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 118 EEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQA 177
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YVS NKIF+D+VMEVI+P+DD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 178 YVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 237
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+RDE+LR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV I
Sbjct: 238 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 297
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILPVG+H+G+L+SVL+L T AK E+Q+QFKG+ ++LG+DDMDIFKGISLKL+AME L
Sbjct: 298 KILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHL 357
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
+GK+VLVQI NPAR G+DV+E + ET+ T RRIN+ +G Y+P+VLID +
Sbjct: 358 FETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLV 417
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480
E+ AYY A+CCLV AVRDGMNL+PY+YI+CRQG + P T S LVVS
Sbjct: 418 PRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSSPRT---STLVVS 474
Query: 481 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540
EF+GCSPSLSGAIRVNPW++DAVAEA++SAL +S+ EKQ+RHEKHY Y+STHDV YWA+S
Sbjct: 475 EFIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKS 534
Query: 541 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 600
F+QDLERACRDH +RCWGIGFGLGFRV++L P+FRKLS++HIV Y++T+ RAI LDYD
Sbjct: 535 FMQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYD 594
Query: 601 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660
GT++ SI P+ E V++L LC DP N VF+VSG+ R++L+ W S CE LGIAAEHG
Sbjct: 595 GTLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHG 654
Query: 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 720
YF+R +WETC S D W+ + EPVM+ Y E TDG++IE KESALVW+ Q ADPDF
Sbjct: 655 YFIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDF 714
Query: 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780
GSCQAKE+LDHLESVLANEPV VK G +IVEVKPQGV+KGL A+ + M ++G P+ V
Sbjct: 715 GSCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMV 774
Query: 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
+CIGDDRSDEDMFE I S P L EVFACTVG+KPSKAKY+LDD A++L++L GL
Sbjct: 775 MCIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGL 834
Query: 841 AEASA 845
++S+
Sbjct: 835 GDSSS 839
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2875 (1017.1 bits), Expect = 1.6e-299, P = 1.6e-299
Identities = 528/845 (62%), Positives = 659/845 (77%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M S+S+ NLLDLASGD + + + LPRV TV G++S++D + SD S +ER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
IIV N LPL + S+ +G W FS D DS LL LKDG + EVIYVG +K +D+SEQ
Sbjct: 61 KIIVANFLPLNGKKDSE-TGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQ 119
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
DEVS L E F CV F+P ++ KFY GFCKQ LWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQA 179
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
YVS NKIFADKVM VI+ ++D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIY
Sbjct: 180 YVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY 239
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+R+ELLR LLN DLIGFHTFDYARHFLSCC RMLG+ Y+SKRG+I L+Y GRTV +
Sbjct: 240 RTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFL 299
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILP+GIH+G+L+SVLNLP T K+ E+Q++++G+ ++LGVDDMDIFKG+SLK+LA E L
Sbjct: 300 KILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHL 359
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420
L Q PS GKIVL+QI NPARG G+DVQE + ET+ TV+RIN+ +G Y+PVVLID P+
Sbjct: 360 LQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPV 419
Query: 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480
+E+ AYY +AECC+V AVRDGMNL+PY+Y +CRQG ++ +LG+ ++S LV+S
Sbjct: 420 PRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLS 479
Query: 481 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540
EF+GCSPSLSGAIRVNPW++DAVA+++ SA+ +SD EKQ+RH+KH+ Y+STHDV YWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARS 539
Query: 541 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 600
F QDLERA RDH +RCWG+G+GLGFR+VAL PNFR+LSI+ VSAY+R+ RAI LDYD
Sbjct: 540 FSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYD 599
Query: 601 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660
GT++ SI P+AE ++ L LC DP N +F+VSG+ + +L+EW + CE LGIAAEHG
Sbjct: 600 GTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHG 659
Query: 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 720
YF R N DWET D WK++ EP+M+LYTETTDGS IE KESALVW+ Q ADPDF
Sbjct: 660 YFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDF 719
Query: 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780
GSCQAKELLDHLE+VL NEPV V G IVEVKPQGV+KGLV L M + G+ PDFV
Sbjct: 720 GSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFV 779
Query: 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
+CIGDDRSDE+MFE I + + S S E+FACTVG+KPSKAKY+LD+ ++++++L GL
Sbjct: 780 VCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGL 839
Query: 841 AEASA 845
A S+
Sbjct: 840 ANTSS 844
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2682 (949.2 bits), Expect = 4.6e-279, P = 4.6e-279
Identities = 505/846 (59%), Positives = 632/846 (74%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQER 60
M S+ + L L S D + R+P T L E DD N + V++ +
Sbjct: 1 MSPESWKDQLSLVSADDYRIMG-RNRIPNAVTKLSGL-ETDDPNGGAW-------VTKPK 51
Query: 61 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 120
I+V NQLPLRAHR S W F +D DSL LQLKDG + EV+YVG + + SEQ
Sbjct: 52 RIVVSNQLPLRAHRDIS-SNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQ 110
Query: 121 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 180
++VSQ LLE F+CVP F+P +L +K+YHGFCK +LWP+FHY+LP++ G FDRS W+A
Sbjct: 111 EDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRA 170
Query: 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 240
Y +VNKIFADK+ EV++PDDD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFPSSEIY
Sbjct: 171 YTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIY 230
Query: 241 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 300
RTLP+RDE+L+ LN DL+GFHTFDYARHFLSCCSRMLG+ Y+SKRGYIGLEYFGRTVSI
Sbjct: 231 RTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSI 290
Query: 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360
KILPVGIH+GQ++S+ +T KV L+++FKG IVMLGVDD+D+FKGISLK AM QL
Sbjct: 291 KILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQL 350
Query: 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG-YQPVVLIDTP 419
L QN RGK+VLVQI NPAR G+DVQ+V+ + + IN FGRPG Y+P+V I+ P
Sbjct: 351 LEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGP 410
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ +++AYY I+EC +V AVRDGMNL+PY+Y + RQG+ LD LG + S+++V
Sbjct: 411 VSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIV 470
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF+GCSPSLSGAIRVNPWNIDAV AM SA+ +SD EK +RH+KH++Y+S+H+VAYWAR
Sbjct: 471 SEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWAR 530
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDY 599
S+ QDL+RAC+DH +R WG+GFGL F+VVALDPNFR+L + IV AY+R+ +R ILLDY
Sbjct: 531 SYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDY 590
Query: 600 DGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659
DGT+M ++ P+ + +++L+ LC DP N+VF+VSG+ +D L++WF SC LGI+AEH
Sbjct: 591 DGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEH 650
Query: 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPD 719
GYF R N WET D SWK+IA+PVM Y E TDGS IE KESA+VW+ Q AD
Sbjct: 651 GYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHS 710
Query: 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ-KGMLPD 778
FGS QAKELLDHLESVL NEPV VK G +IVEVKPQGV+KG V +H + TM KG PD
Sbjct: 711 FGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPD 770
Query: 779 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838
F+LCIGDDRSDEDMF+ I S+ + EVFACTVGQKPSKAKYYLDDT +++ML
Sbjct: 771 FLLCIGDDRSDEDMFDSIVKHQDVSSIG-LEEVFACTVGQKPSKAKYYLDDTPSVIKMLE 829
Query: 839 GLAEAS 844
LA AS
Sbjct: 830 WLASAS 835
|
|
| DICTYBASE|DDB_G0284975 tpsB "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 167/468 (35%), Positives = 263/468 (56%)
Query: 93 LQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLET---FKCVPAFIPPELFSKFYHG 149
L+ KD + ED +++G +++ E+ ++Q + E F+ V F+ P F +Y G
Sbjct: 87 LKAKDEI-EDW--LWIGWSHCEVNEDEEPMLNQAIKEFSPHFEHV--FLNPRQFENYYKG 141
Query: 150 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH 209
+CK LW L HY + R W+ YV VN++FA+K+ V P D +W+HDYH
Sbjct: 142 YCKNGLWLLLHYQMNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRPSD-IIWIHDYH 195
Query: 210 LMVLPTFLRKRFN-RVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 268
LM++P LR+ +GFF H+PFPS E++R LP R ELL+ +L+++LIGF +F+Y R
Sbjct: 196 LMLVPQMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVR 255
Query: 269 HFLSCCSRMLGVSYQSKRGYIGLEYF--GRT--VSIKILPVGIHIGQLQSVLNLPETEAK 324
HF S C+R+L + K GLE F G T +++ P+G+ LNLPE ++
Sbjct: 256 HFKSSCARLLDLEVHPK----GLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSR 311
Query: 325 VAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG 384
V L+ FKG+ V++ D +D +G+ KL EQLL+ +P GK+V +QI P G
Sbjct: 312 VESLRKIFKGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEG 371
Query: 385 RDVQEVQSETHATVR----RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV 440
+ E Q H TV RIN FG+ + P+ I+ + + E A Y +A+ L+T +
Sbjct: 372 DETDE-QKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPI 430
Query: 441 RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNI 500
RDGMNL +EY++C++ N G+ L++SEF G + L G+I VNP++
Sbjct: 431 RDGMNLTSHEYVVCQKDN------FGV---------LILSEFAGAARCLGGSIIVNPFSK 475
Query: 501 DAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548
+ EA+ AL +S +++++H+ +Y YV + ++W + FL DL A
Sbjct: 476 KEIMEAIIEALNMSMHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEA 523
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1020 (364.1 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 245/718 (34%), Positives = 386/718 (53%)
Query: 133 CVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSL-WQAYVSVNKIFADK 191
C+P F+ E+ ++Y+G+C LWP+FHY L P+ R D ++ +Q+ K
Sbjct: 74 CIPVFLE-EVCDQYYNGYCNNILWPIFHY-LGTPPEY--RNDATITYQSQYEAYKKANQI 129
Query: 192 VMEVISP---DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 248
+V+ + D VW HDYH+M+LP +L++ +++K+G+FLH+PFPSSE+Y+TLP R +
Sbjct: 130 FFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEMYKTLPSRSD 189
Query: 249 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIH 308
LLR++L ADL+GFHT+D+ARHFL+ C +LGV S+ G+ G+ + + P+GI
Sbjct: 190 LLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSE----GIVDQGKVTRVAVFPIGIE 245
Query: 309 IGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR 368
+ + L E + + ++ F G+ ++LGVD +D KGI K A E+ L +N R
Sbjct: 246 PERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEENAEWR 305
Query: 369 GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428
GK++L+QIA P R + Q+++ + H V RIN FG P++ +D + F + A
Sbjct: 306 GKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFNQLCAL 365
Query: 429 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 488
Y I + LVT++RDGMNL+ E+I C++ A+ +L++SEF G S
Sbjct: 366 YAITDVLLVTSLRDGMNLVSSEFIACQK---------------AEKGVLILSEFAGAGQS 410
Query: 489 L-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ-DLE 546
L +GAI VNPWNI V+ A+ AL +S EK+ +H+ +++YV TH WA F++ L
Sbjct: 411 LGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLT 470
Query: 547 RACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDH-IVSAYKRTKNRAILLDYDGTIMV 605
+ G G P +H ++ Y ++ NR ++L + GT+
Sbjct: 471 NILCSKLIEITTSAELGAGLAATLELP-------EHDVIQQYSKSNNRLLILGFYGTLTQ 523
Query: 606 P--------GSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 657
P ++ + + L LC DPK V ++S ++ L + F + +AA
Sbjct: 524 PMKNQERRGDGMNLELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYN-MWLAA 582
Query: 658 EHGYFVRPNYGVDWETCVSVP-DFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA 716
E+G F+R G +W T + + W + V K +TE T GS +ET E++LVWN++ A
Sbjct: 583 ENGMFLRHTSG-EWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENA 641
Query: 717 DPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL-ETMHQKG 774
D +FG QA+++L HL ++N V V G VEV GV KG + L E +H K
Sbjct: 642 DAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKS 701
Query: 775 ML-P-DFVLCIGDDRS-DEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 829
M P D+VLCIG DED++ + P L+ A+ + + P K + D
Sbjct: 702 MATPIDYVLCIGCFLGKDEDVYTFFE-----PELTKKAKSLSSSGSDSPKKVSSTIVD 754
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 567 (204.7 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 123/349 (35%), Positives = 199/349 (57%)
Query: 150 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH 209
+ ++ L+ L HY D GRF+R W YV +N++FA+++++ + D VW+HDYH
Sbjct: 247 YAEKELYALLHYKQNGPTD--GRFERDSWTDYVRMNQLFAERILQEYK-EGDIVWIHDYH 303
Query: 210 LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 269
L +LP+ LR+ + +GF+LHSPFPSSE R L R E+L +L A++IGF TF Y+RH
Sbjct: 304 LFLLPSILRQHVPNIYIGFYLHSPFPSSEYMRCLAKRKEILTGVLGANMIGFQTFSYSRH 363
Query: 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSV-LNLPETEAKVAEL 328
F SCC+R+LG S G++ +G V++ + P+GI +Q + +TE V L
Sbjct: 364 FSSCCTRVLGFESDSA----GVDAYGAHVAVDVFPIGIDAEAIQKIAFENADTEKAVEGL 419
Query: 329 QDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPAR-GRGRDV 387
+ + G+ +++G D +D +G++ KL A E L + P R K+VL+Q+ +P ++
Sbjct: 420 RQLYAGKKIIVGRDRLDSARGVAQKLQAFETFLERFPEWRDKVVLIQVTSPTSVEEEKEE 479
Query: 388 QEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLI 447
Q++ S V IN FG + PV L +E A +A+ L+T VRDGMN
Sbjct: 480 QKIASRISNLVSTINGRFGSLSFSPVKYYPQYLSPHEYFALLRVADVGLITTVRDGMNTT 539
Query: 448 PYEYIICRQGNEK-LDMTLGLDPSTAKSSMLVVSEF--VGCSPSLSGAI 493
EYI+C+Q N L ++ + A SS + ++ + +G S +++ A+
Sbjct: 540 SLEYILCQQENHSPLILSEFSGTAGALSSAIHINPWDTIGVSEAINKAL 588
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3392 | 0.8261 | 0.9727 | yes | no |
| Q94AH8 | TPS6_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7285 | 0.9733 | 0.9767 | no | no |
| O23617 | TPS5_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8262 | 0.9768 | 0.9779 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 863 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-178 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-171 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-145 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-145 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 1e-86 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 5e-69 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-68 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 1e-42 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 8e-26 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 6e-14 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 1e-07 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 2e-07 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 4e-06 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 1e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 1e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 4e-04 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1506 bits (3899), Expect = 0.0
Identities = 669/850 (78%), Positives = 764/850 (89%), Gaps = 4/850 (0%)
Query: 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAPSSVSQ-E 59
MVSRSYSNLL+LASG+ P+F R +R+PR+ TVAG++S+IDD+ S SV SD SS +
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKD 60
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGED-VEVIYVGCIKEQIDLS 118
R+IIV NQLP+RA R SDGS GW FSWDE+SLLLQLKDGLG+D +EVIYVGC+KE+I L+
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLN 120
Query: 119 EQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLW 178
EQ+EVSQ LLETFKCVP F+PP+LF+++YHGFCKQ LWPLFHYMLPLSPDLGGRF+RSLW
Sbjct: 121 EQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 179 QAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 238
QAYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 239 IYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298
IY+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG+SY+SKRGYIGLEY+GRTV
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLA 356
SIKILPVGIH+GQLQSVL+LPETEAKV EL QF + +I++LGVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 357 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416
MEQLL Q+P +GK+VLVQIANPARG+G+DV+EVQ+ETH+TV+RIN+ FG+PGY P+VLI
Sbjct: 361 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420
Query: 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 476
D PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYII RQGNEKLD LGL+PST K SM
Sbjct: 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480
Query: 477 LVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536
LVVSEF+GCSPSLSGAIRVNPWNIDAVA+AMDSAL +++ EKQ+RHEKHYRYVSTHDV Y
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540
Query: 537 WARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAIL 596
WARSFLQDLER CRDH RRRCWGIGFGL FRVVALDPNFRKLS++HIVSAYKRT RAIL
Sbjct: 541 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 597 LDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIA 656
LDYDGT+M SI SP+++++ IL+ LCRD N+VF+VS + R TLA+WFS CE LGIA
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIA 660
Query: 657 AEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA 716
AEHGYF+R V+WETCV V D SWKQIAEPVM+LYTETTDGSTIE KE+ALVW ++ A
Sbjct: 661 AEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720
Query: 717 DPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML 776
DPDFGSCQAKELLDHLESVLANEPV+VKSG NIVEVKPQGV+KGLVA+ L M ++GML
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGML 780
Query: 777 PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRM 836
PDFVLCIGDDRSDEDMFEVI S+ AGPS++P AEVFACTVGQKPSKAKYYLDDTAEI+R+
Sbjct: 781 PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRL 840
Query: 837 LLGLAEASAQ 846
+ GLA S Q
Sbjct: 841 MQGLASVSEQ 850
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 683 bits (1764), Expect = 0.0
Identities = 245/493 (49%), Positives = 320/493 (64%), Gaps = 27/493 (5%)
Query: 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSL-LLQLKDGLGEDVEVIYVGCIKEQIDL 117
R+++V N+LP+ A R +G W FS S L+ +GL E E ++VG +D
Sbjct: 1 SRLVVVSNRLPVTAKREEEGK--WEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDE 58
Query: 118 SE-QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRS 176
E +D VSQ L E F CVP F+ E ++Y+GF LWPLFHY LP P+ FDRS
Sbjct: 59 DEPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLP--PNNEDEFDRS 116
Query: 177 LWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 236
W AYV VNK+FADK++EV D +WVHDYHLM+LP LRKR K+GFFLH PFPS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGD-LIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPS 175
Query: 237 SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 296
SEI+R LP+R+E+LR LL ADLIGFHT+DYARHFLSCCSR+LG+ S G +EY GR
Sbjct: 176 SEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGG---VEYGGR 232
Query: 297 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI-VMLGVDDMDIFKGISLKLL 355
TVS+ P+GI G+++S L P + KV EL+++F + ++LGVD +D KGI KLL
Sbjct: 233 TVSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLL 292
Query: 356 AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415
A E+ L + P RGK+VLVQIA P+RG + Q ++S+ V RIN FG Y PV
Sbjct: 293 AFERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHH 352
Query: 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 475
+ L F E IA Y IA+ CLVT++RDGMNL+ YEY+ C+Q +
Sbjct: 353 LHRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRK---------------G 397
Query: 476 MLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDV 534
+L++SEF G + SL GAI VNPW+I+ VAEA++ AL +S+ E+Q RH K ++Y+S HDV
Sbjct: 398 VLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDV 457
Query: 535 AYWARSFLQDLER 547
YWA SFL DL+R
Sbjct: 458 QYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 601 bits (1551), Expect = 0.0
Identities = 213/487 (43%), Positives = 286/487 (58%), Gaps = 27/487 (5%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+++V N+LP+ R DG + L GL + ++VG + D E
Sbjct: 1 RLVVVSNRLPVSIERDGDG---EFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEE 57
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
+DEVS LL + P F+ PE F +Y+GF + LWPLFHY L L RFDR W+
Sbjct: 58 EDEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWE 112
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
AYV VN+ FAD + EV+ P D VWVHDYHL++LP LR+R ++GFFLH PFPSSEI
Sbjct: 113 AYVRVNRKFADAIAEVLRPGD-LVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEI 171
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
+R LP R+ELLR LL ADLIGF T YAR+FLSCCSR+LG+ G+EY GR V
Sbjct: 172 FRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVR 228
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
+ P+GI + + PE + + AEL+++ G+ +++GVD +D KGI +LLA E+
Sbjct: 229 VGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFER 288
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
LL + P RGK+VLVQIA P+R + QE++ E V RIN FG + PV +
Sbjct: 289 LLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRS 348
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
L E A Y A+ LVT +RDGMNL+ EY+ C+ + +L++
Sbjct: 349 LPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDD---------------PGVLIL 393
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
SEF G + LSGA+ VNP++ID VA+A+ AL + E++ RH K YV THDV WA
Sbjct: 394 SEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWAN 453
Query: 540 SFLQDLE 546
SFL DL
Sbjct: 454 SFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 598 bits (1544), Expect = 0.0
Identities = 279/798 (34%), Positives = 407/798 (51%), Gaps = 87/798 (10%)
Query: 60 RMIIVGNQLPLRAHRSSDG------SGGWTFSWDEDSLLLQLKDGLGEDVEVIYVG---- 109
R+IIV N+LP+ R G GG L L+ E ++VG
Sbjct: 2 RLIIVSNRLPVTVVREDGGVELTPSVGG---------LATGLR-SFHERGGGLWVGWPGL 51
Query: 110 CIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDL 169
+ E+ ++ + L E VP F+ E ++Y GFC LWPLFHY +
Sbjct: 52 DL-EEESEEQRARIEPRL-EELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-- 107
Query: 170 GGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFF 229
F+ W++Y VN+ FA+ + + P D VWVHDY LM+LP LR+R ++GFF
Sbjct: 108 ---FEDRFWESYERVNQRFAEAIAAIARPGD-VVWVHDYQLMLLPAMLRERLPDARIGFF 163
Query: 230 LHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYI 289
LH PFPS E++R LP R+E+L LL ADLIGFHT+DY RHFLS R+LG Y+++ G I
Sbjct: 164 LHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLG--YETELGEI 221
Query: 290 GLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKG 349
L GR V + P+GI + + PE + ++ L+ +G+ ++L +D +D KG
Sbjct: 222 RLG--GRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKG 279
Query: 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409
I +LLA E+ L +NP RGK+ LVQ+A P+R QE++ E V RIN FG
Sbjct: 280 IPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVD 339
Query: 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 469
+ P+ L F E +A Y A+ LVT +RDGMNL+ EY+ R +
Sbjct: 340 WTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGD---------- 389
Query: 470 STAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV 529
+L++SE G + L+ A+ VNP +I+ +A A+ AL + + E++ R + +
Sbjct: 390 -----GVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERL 444
Query: 530 STHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKR 589
+DV WA FL +L A + F + P + + I++ Y+
Sbjct: 445 RRYDVHKWASDFLDELREAAEKNKA-----------FASKPITPA----AAEEIIARYRA 489
Query: 590 TKNRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 647
R +LLDYDGT+ P P+ E +L L DP V ++SG+DRDTL WF
Sbjct: 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWF 549
Query: 648 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES 707
+ + AEHG + R G +W+ V WK P+++ + + T GS IE KE+
Sbjct: 550 GDL-PIHLVAEHGAWSRAP-GGEWQLLEPV-ATEWKDAVRPILEEFVDRTPGSFIEEKEA 606
Query: 708 ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL 767
+L W+++ ADP+ G +A EL+ L S+L+N P+ V G +VEV+P GVNKG + L
Sbjct: 607 SLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666
Query: 768 ETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT--VGQKPSKAKY 825
E DFVL IGDD +DEDMF + P A T VG S+A+Y
Sbjct: 667 E-AGP----YDFVLAIGDDTTDEDMFRAL----------PET---AITVKVGPGESRARY 708
Query: 826 YLDDTAEILRMLLGLAEA 843
L E+ +L L +
Sbjct: 709 RLPSQREVRELLRRLLDI 726
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 534 bits (1377), Expect = e-178
Identities = 291/824 (35%), Positives = 439/824 (53%), Gaps = 83/824 (10%)
Query: 58 QERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGCIKEQI- 115
+ R+++V N+LP+ A R+ + S W+ L+ L LG ++ E ++G +
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDS--WSLEMSPGGLVSAL---LGVKEFETKWIGWPGVDVH 64
Query: 116 DLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG-RF 173
D + ++++L E C+P F+ E+F ++Y+G+C LWP+FHYM LP R
Sbjct: 65 DEIGKAALTESLAEK-GCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRT 122
Query: 174 DRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP 233
S + AY N++F D V E + D VW HDYHLM LP +L++ N++K+G+FLH+P
Sbjct: 123 FESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTP 181
Query: 234 FPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEY 293
FPSSEIY+TLP R ELLRA+L ADLIGFHT+D+ARHFLS C+R+LGV + G+
Sbjct: 182 FPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237
Query: 294 FGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353
G+ + + P+GI + + LPE + + EL+ F G+ V+LGVD +D+ KGI K
Sbjct: 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQK 297
Query: 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413
LA E+ L +NP R K++LVQIA P R + Q+++S+ H V RIN FG P+
Sbjct: 298 YLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPI 357
Query: 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAK 473
+D + F A Y I + LVT++RDGMNL+ YE++ C++ AK
Sbjct: 358 HHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK---------------AK 402
Query: 474 SSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTH 532
+LV+SEF G SL +GA+ VNPWNI V+ A+ AL +SD E++ RH +++YV TH
Sbjct: 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462
Query: 533 DVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKN 592
WA F+ +L + R + L ++ Y ++ N
Sbjct: 463 SAQKWADDFMSELNDIIVEAE------------LRTRNIPLE---LPEQDVIQQYSKSNN 507
Query: 593 RAILLDYDGTIMVPGSISTSP-----NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 647
R ++L + GT+ P + + E L LC DPK V ++S +D L + F
Sbjct: 508 RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567
Query: 648 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVP---DFSWKQIAEPVMKLYTETTDGSTIET 704
+ +AAE+G F+R G +W T ++P + W + V K +T+ T S +E
Sbjct: 568 GE-YNIWLAAENGMFLRHTSG-EWVT--TMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEK 623
Query: 705 KESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVA 763
E++LVWN++YAD +FG QA+++L HL ++N V V G VEV GV KG
Sbjct: 624 SETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAI 683
Query: 764 QHQL-ETMHQKGM-LP-DFVLCIGDDRS-DEDMFEVIKSAAAGPSLSPVAE--------- 810
L E +H K M P DFV C G DED++ + S +
Sbjct: 684 GRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVS 743
Query: 811 ----------VFACTVGQKPSKAKYYLDDTAEILRMLLGLAEAS 844
F+C +GQ +KA+Y LD + +++ +L LA A+
Sbjct: 744 SNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVAN 787
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 520 bits (1342), Expect = e-171
Identities = 287/796 (36%), Positives = 432/796 (54%), Gaps = 89/796 (11%)
Query: 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGC----IKE 113
+R+++V N+LP+ A R + S W+ L+ L LG ++ E ++G + +
Sbjct: 94 QRLLVVANRLPVSAVRRGEDS--WSLEISAGGLVSAL---LGVKEFEARWIGWAGVNVPD 148
Query: 114 QIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG- 171
++ Q +++ L E +C+P F+ E+ ++Y+G+C LWPLFHY+ LP L
Sbjct: 149 EVG---QKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT 204
Query: 172 RFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 231
R +S + AY N++FAD V E + D VW HDYHLM LP L++ + +K+G+FLH
Sbjct: 205 RSFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLH 263
Query: 232 SPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGL 291
+PFPSSEI+RTLP R ELLR++L ADL+GFHT+DYARHF+S C+R+LG+ + G+
Sbjct: 264 TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GV 319
Query: 292 EYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351
E GR + P+GI + L P+ + + EL+++F G+ VMLGVD +D+ KGI
Sbjct: 320 EDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIP 379
Query: 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQ---SETHATVRRINKIFGRP 408
K+LA E+ L +NP R K+VL+QIA P R DV E Q S+ H V RIN FG
Sbjct: 380 QKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQKLTSQVHEIVGRINGRFGTL 436
Query: 409 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLD 468
P+ +D L F+ A Y + + LVT++RDGMNL+ YE++ C+
Sbjct: 437 TAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQD------------ 484
Query: 469 PSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 527
+K +L++SEF G + SL +GAI VNPWNI VA ++ AL + + E++ RH ++
Sbjct: 485 ---SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFM 541
Query: 528 YVSTHDVAYWARSFLQDL-ERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSA 586
+V+TH WA +F+ +L + +R R +V L + +
Sbjct: 542 HVTTHTAQEWAETFVSELNDTVVEAQLRTR----------QVPPQ------LPPEDAIQR 585
Query: 587 YKRTKNRAILLDYDGTIMVPGSISTS-------------PNAEAVAILDNLCRDPKNVVF 633
Y ++ NR ++L ++ T+ P P + L LC DPK +
Sbjct: 586 YLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEP--LRALCSDPKTTIV 643
Query: 634 LVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFS---WKQIAEPVM 690
++SG DR L E F + + +AAE+G F+R G +W T ++P+ W + V
Sbjct: 644 VLSGSDRSVLDENFGEFD-MWLAAENGMFLRHTKG-EWMT--TMPEHLNMDWVDSVKHVF 699
Query: 691 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNI 749
+ +TE T S ET+E++LVWN++YAD +FG QA+++L HL ++N V V G
Sbjct: 700 EYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRS 759
Query: 750 VEVKPQGVNKGLVAQHQL-ETMHQKGMLP--DFVLCIGDDRS-DEDMFEVIKSAAAGPSL 805
VEV+P GV KG L E +H K M D+VLCIG DED++ + PS
Sbjct: 760 VEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPEL--PSD 817
Query: 806 SPVAEVFACTVGQKPS 821
SP G K S
Sbjct: 818 SPAIARSRSPDGLKSS 833
|
Length = 934 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 437 bits (1125), Expect = e-145
Identities = 183/491 (37%), Positives = 268/491 (54%), Gaps = 38/491 (7%)
Query: 60 RMIIVGNQLPLRAHRSSD--GSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVG-CIKEQID 116
R+I+V N+LP+ R +GG L + L L + ++ G K +
Sbjct: 1 RLIVVSNRLPVPITRGGLEPSAGG---------LAVALLGAL-KATGGVWFGWSGKTVEE 50
Query: 117 LSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRS 176
+ + L P F+ E +Y+GF LWPLFHY L R+DR
Sbjct: 51 DEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI-----RYDRK 105
Query: 177 LWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 236
W+AY VN++FA+ + ++ P D VWVHDYHLM+LP LR+ + K+GFFLH PFPS
Sbjct: 106 AWEAYRRVNRLFAEALAPLLQPGD-IVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS 164
Query: 237 SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 296
SEIYRTLP R ELL LL DL+GF T+D AR+FLS SR LG ++ G+E GR
Sbjct: 165 SEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELG--LETLPN--GVESGGR 220
Query: 297 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 356
TV + P+GI + + P + ++AEL++ KG+ +++GVD +D KG+ +LLA
Sbjct: 221 TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLA 280
Query: 357 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416
E+ L ++P RGK+VLVQIA P+RG + Q+++ + V RIN FG + P+ +
Sbjct: 281 FERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYL 340
Query: 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 476
+ E +A Y A+ LVT +RDGMNL+ EY+ + K +
Sbjct: 341 NRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD---------------PKDGV 385
Query: 477 LVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536
L++SEF G + L+GA+ VNP++ID +A+A+ AL + E++ RH + +DV
Sbjct: 386 LILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQR 445
Query: 537 WARSFLQDLER 547
W FL DL
Sbjct: 446 WREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 436 bits (1124), Expect = e-145
Identities = 188/492 (38%), Positives = 270/492 (54%), Gaps = 30/492 (6%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDED--SLLLQLKDGLGEDVEVIYVGCIKEQIDL 117
R+I+V N+LP++ D L+ LK L ++G
Sbjct: 16 RLIVVSNRLPVKKTPEGDKG---IEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPT 71
Query: 118 SEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSL 177
E + + + F P + E + +Y+GF LWPLFHY + ++R+
Sbjct: 72 DESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNW 126
Query: 178 WQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 237
W AYV VN+ FADK++E+ P D +WVHDYHL+++P LR+R K+GFFLH PFPSS
Sbjct: 127 WDAYVKVNRKFADKIVEIYEPGD-IIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 238 EIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 297
E++R LP R+E+L LL ADLIGF T YAR+FL CSR+LGV+ + + G GR
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNG--ADGRI 243
Query: 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAEL-QDQFKGQIVMLGVDDMDIFKGISLKLLA 356
V + P+GI + + L P + KV EL + + + +++GVD +D KGI +LLA
Sbjct: 244 VKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLA 303
Query: 357 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416
E+LL + P RGK+VL+QIA P+R + Q ++ + V RIN FG + PV +
Sbjct: 304 FERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYL 363
Query: 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 476
L E +A Y A+ LVT +RDGMNL+ EY+ ++ K +
Sbjct: 364 HRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR---------------DKPGV 408
Query: 477 LVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536
L++SEF G + L A+ VNPW+ VA+A+ AL +S E++ RHEK + V THDVA
Sbjct: 409 LILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVAR 468
Query: 537 WARSFLQDLERA 548
WA SFL DL +A
Sbjct: 469 WANSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 1e-86
Identities = 109/239 (45%), Positives = 144/239 (60%), Gaps = 7/239 (2%)
Query: 596 LLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL 653
LDYDGT+ +V + P+ +++L+ L DP N V ++SG+ R + F L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRA-FEDLFFGVPNL 59
Query: 654 GIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNF 713
G+AAEHG F+R G DW V D WK+ +++ YTE T GS IE K+SAL W++
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 714 QYADPDFGSCQAKELLDHLESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 772
+ AD DFG QAKEL +HLESVL + P V V G +VEV+P GV+KG A+ LE +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 773 KGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831
G PDF LCIGDDR+DEDMF+V+ EV A +VG KPS AKY+LDD +
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVVNPT---KMSGLSIEVGATSVGSKPSSAKYFLDDPS 235
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 5e-69
Identities = 143/412 (34%), Positives = 223/412 (54%), Gaps = 44/412 (10%)
Query: 146 FYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWV 205
+Y+ F LWP FHY L L +F R W+ Y+ VN + ADK++ ++ DD +W+
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKDDD-IIWI 129
Query: 206 HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFD 265
HDYHL+ + LRKR ++GFFLH PFP+ EI+ LP DELL L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 266 YARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL--QSVLNLPETEA 323
FL C S + V+ +S + + +G+ ++ P+GI ++ Q+ LP
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAAGPLP---P 243
Query: 324 KVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGR 383
K+A+L+ + K + V+ +D KG+ + LA E LL + P GKI QIA +RG
Sbjct: 244 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG- 302
Query: 384 GRDVQEVQS-----ETHATVRRINKIFGRPGYQPVVLIDTPLQFYER---IAYYVIAECC 435
DVQ Q ET A RIN +G+ G+ P+ ++ Q ++R + + ++
Sbjct: 303 --DVQAYQDIRHQLETEAG--RINGKYGQLGWTPLYYLN---QHFDRKLLMKIFRYSDVG 355
Query: 436 LVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRV 495
LVT +RDGMNL+ EY+ + DP A +LV+S+F G + L+ A+ V
Sbjct: 356 LVTPLRDGMNLVAKEYVAAQ------------DP--ANPGVLVLSQFAGAANELTSALIV 401
Query: 496 NPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547
NP++ D VA A+D AL + AE+ RH + + +D+ +W F+ DL++
Sbjct: 402 NPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 235 bits (600), Expect = 2e-68
Identities = 129/450 (28%), Positives = 213/450 (47%), Gaps = 42/450 (9%)
Query: 114 QIDLSEQD--EVSQTLLETFKCVPAFIP--PELFSKFYHGFCKQHLWPLFHYMLPLSPDL 169
+ D + + + T+ +K A IP E FYH K+ WP+ H P
Sbjct: 49 EHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH-TFPER--- 104
Query: 170 GGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFF 229
+F WQ ++ VN+ FA+ + + VWVHDY+L ++P ++R+ +K+ FF
Sbjct: 105 -FQFREDDWQVFLKVNRAFAEAACLE-AAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFF 162
Query: 230 LHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK---- 285
H+PFPS++++ LP R++++ +LL D IGFH Y +F+ ++ + S+
Sbjct: 163 HHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVD 222
Query: 286 -------------RGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF 332
R L+ R V + PVG +++S L + ++ +
Sbjct: 223 PRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL 282
Query: 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQS 392
G ++L + +D KGI KL A E+LL + P GK+ LV PA E+Q
Sbjct: 283 AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQG 342
Query: 393 ETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 452
+ V RIN F R G+ P+ L + E A++ +A+ +T +RDG+NL+ EY+
Sbjct: 343 QIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYV 402
Query: 453 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALG 512
+ GL +LV+SEF G + L GA+ NP++ + E + AL
Sbjct: 403 AAQ----------GLL-----DGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALA 447
Query: 513 VSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542
+ AE+Q R + + V+ +DV WA FL
Sbjct: 448 MPKAEQQARMREMFDAVNYYDVQRWADEFL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 1e-42
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 578 LSIDHIVSAYKRTKNRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLV 635
L + ++ Y + R + LDYDGT+ +VP + P+ +++L +L DP+NVV ++
Sbjct: 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAII 63
Query: 636 SGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 695
SG+ L F G+G+ AEHG VR G W D W + +++ Y E
Sbjct: 64 SGRSLAELERLFG-VPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVE 122
Query: 696 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQ 755
T GS IE K A+ +++ A+ D G+ A L + L + V G +VE++P
Sbjct: 123 RTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPP 179
Query: 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 815
GV+KG M + F + GDD +DED F + +
Sbjct: 180 GVSKGAAI---KYIMDELPFDGRFPIFAGDDLTDEDAFAAVNK----------LDSITVK 226
Query: 816 VGQKPSKAKYYLDDTAEILRMLLGLAEASAQDAC 849
VG ++AK+ L LR L L EA +A
Sbjct: 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALGNEAR 260
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 8e-26
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 591 KNRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW-F 647
+ RA DYDGT+ +VP + + + IL L P N ++++SG R L +W
Sbjct: 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISG--RKFLEKWLG 59
Query: 648 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES 707
GLG+A EHG ++ N ++ SWK A + + T G IE K
Sbjct: 60 VKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PGVFIERKGV 118
Query: 708 ALVWNF-QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 766
AL W++ Q P+ +AKEL E +L+ + V G +VE+KP+ VNKG + +
Sbjct: 119 ALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRL 175
Query: 767 LETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYY 826
L G+ P + +GDD +DED F V+ + PV G K + AK++
Sbjct: 176 LWHQPGSGISP---VYLGDDITDEDAFRVVNNQWGNYGFYPVPIG----SGSKKTVAKFH 228
Query: 827 LDDTAEILRML 837
L ++L L
Sbjct: 229 LTGPQQVLEFL 239
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 6e-14
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL 653
+ D DGT++ P + SP E + L+ L VV V+G+ + E L
Sbjct: 1 LLFFDLDGTLLDPNAHELSP--ETIEALERLREAGVKVVL-VTGRSLAEIKELLKQL-PL 56
Query: 654 GIAAEHGYFVRPNYGVDWETCVSVPDF--SWKQIAEPVMKLYTETTDGSTIETKESALVW 711
+ AE+G + + + V + K+ +K +E G+ IE K A+
Sbjct: 57 PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAV-- 114
Query: 712 NFQYADPDFGSCQAKELLDHLESVLANEPV--SVKSGPNIVEVKPQGVNKGLVAQHQLET 769
Y + G ++ + LE + N+ ++ G +EV P GV+KG Q L+
Sbjct: 115 AIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174
Query: 770 MHQKGMLPDFVLCIGDDRSDEDMFEV 795
++ K D +L GD +DE+MFEV
Sbjct: 175 LNGK---RDEILAFGDSGNDEEMFEV 197
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 1e-07
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 591 KNRAILLDYDGTIMVPGSISTSPN-AEAVAILDNLCRDPKNV--VFLVSGKDRDTLAEWF 647
K + LDYDGT+ I P+ A + N R +VSG+ R+ ++ +
Sbjct: 97 KQIVMFLDYDGTL---SPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFV 153
Query: 648 SSCEGLGIAAEHGYFVR-----PNYGVDWETCVSVPDFSWKQIAEPVMKLY---TETTDG 699
E L A HG ++ Y + ++ + P + + V K T++ G
Sbjct: 154 KLTE-LYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPG 212
Query: 700 STIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP-VSVKSGPNIVEVKPQ-GV 757
+ +E + +F+ + + S +L + + SVL N P + + G ++E++P
Sbjct: 213 AKVENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKW 268
Query: 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG 817
+KG + LE++ F + IGDDR+DED F++++ G L + +A
Sbjct: 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQG--LGILVSKYA---- 322
Query: 818 QKPSKAKYYLDDTAEILRMLLGLAE 842
K + A Y L + E++ L L E
Sbjct: 323 -KETNASYSLQEPDEVMEFLERLVE 346
|
Length = 354 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 57/276 (20%)
Query: 590 TKNRAILLDYDGTIMVPGSISTSPNAEAV--AILDNLCR--DPKN-VVFLVSGK---DRD 641
+ N A D DGT+ I P+ V IL L + + L+SG+ + D
Sbjct: 12 SANYAWFFDLDGTL---AEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELD 68
Query: 642 TLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFSWKQIAEPVMKLYTETT--D 698
LA+ + +A HG R G +T V +PD + I+ +L+T
Sbjct: 69 ALAKPYR----FPLAGVHGAERRDING---KTHIVHLPDAIARDISV---QLHTALAQLP 118
Query: 699 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA--------NEPVSVKSGPNIV 750
G+ +E K A +++ QA + H +++LA ++++ G +V
Sbjct: 119 GAELEAKGMAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCVV 166
Query: 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 810
E+KP+G NKG ++ G P FV GDD +DE F V+ + G S+
Sbjct: 167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFV---GDDLTDEAGFAVV-NRLGGISVK---- 218
Query: 811 VFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 846
VG ++A + L ++ L + A Q
Sbjct: 219 -----VGTGATQASWRLAGVPDVWSWLEMITTAQQQ 249
|
Length = 266 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 4e-06
Identities = 76/294 (25%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP-KNV-----V 632
S + I + + + K A+ LDYDGT+ I P+ A++ + R KNV
Sbjct: 107 SFEQIAN-FAKGKKIALFLDYDGTL---SPIVDDPDR---ALMSDAMRSAVKNVAKYFPT 159
Query: 633 FLVSGKDRDTLAEWFSSCEGLGIAAEHGY----FVRPNYGVDWETCVSVPDFSWKQI--- 685
++SG+ RD + E E L A HG VR + D C+ D K++
Sbjct: 160 AIISGRSRDKVYELVGLTE-LYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLF 218
Query: 686 ---------AEPVMKLYTETTD---GSTIETKESALVWNFQYADPDFGSCQAKELLDHLE 733
+ V + E+T G+ +E + + +++ D A+ + D L+
Sbjct: 219 QPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLK 278
Query: 734 SVLANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETM---HQKGMLPDFVLCIGDDRS 788
P + + G ++EV+P NKG + LE++ + +LP + IGDDR+
Sbjct: 279 ----KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY---IGDDRT 331
Query: 789 DEDMFEVIKSAAAGPSL--SPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 840
DED F+V++ G + S V K S A Y L D +E++ L L
Sbjct: 332 DEDAFKVLREGNRGYGILVSSVP---------KESNAFYSLRDPSEVMEFLKSL 376
|
Length = 384 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 1e-05
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 682 WKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP- 740
++Q+ E T++T G+ +E + +F+ D S EL+ + SVL N P
Sbjct: 214 YRQLLEK-----TKSTPGAKVENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNFPT 264
Query: 741 VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799
+ + G + E++P +KG + LE++ F + IGDDR+DED F++++
Sbjct: 265 LKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDR 324
Query: 800 AAGPSLSPVAEVFACTVGQKP--SKAKYYLDDTAEILRMLLGLAE 842
G F V + P + A Y L D +E++ L L E
Sbjct: 325 GEG---------FGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360
|
Length = 366 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 724 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI 783
EL L+ + + SGP +E+ P+GV+KG + + + G+ + V+
Sbjct: 152 DLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHL---GIDLEEVIAF 208
Query: 784 GDDRSDEDMFEV 795
GD +D +M E+
Sbjct: 209 GDGENDIEMLEL 220
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 727 ELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 785
EL++ L + ++V SGP +++ P+GV+KG Q + + G+ + V+ GD
Sbjct: 157 ELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGD 213
Query: 786 DRSDEDMFEVI 796
+D +M EV
Sbjct: 214 STNDIEMLEVA 224
|
Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.98 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.98 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.94 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.94 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.94 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.92 | |
| PLN02887 | 580 | hydrolase family protein | 99.92 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.92 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.91 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.91 | |
| PLN02316 | 1036 | synthase/transferase | 99.9 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.9 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.9 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.89 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.89 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.89 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.89 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.89 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.89 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.88 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.88 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.88 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.88 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.88 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.87 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.87 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.87 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.86 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.86 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.86 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.85 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.85 | |
| PLN00142 | 815 | sucrose synthase | 99.85 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.85 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.85 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.85 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.84 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.84 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.84 | |
| PLN02423 | 245 | phosphomannomutase | 99.83 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.82 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.82 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.82 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.82 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.82 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.82 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.81 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.81 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.8 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.8 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.8 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.8 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.8 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.8 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.8 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.79 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.79 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.79 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.78 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.78 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.78 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.78 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.78 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.78 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.78 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.77 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.77 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.76 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.76 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.76 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.75 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.74 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.73 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.73 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.72 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.72 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.71 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.71 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.7 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.69 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.69 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.68 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.68 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.68 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.64 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.64 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.63 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.57 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.51 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.49 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.41 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.35 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.2 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.16 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.16 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.11 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.11 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.09 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.07 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.02 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.97 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.96 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 98.96 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.94 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.86 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.81 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.78 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.78 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.78 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.74 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.74 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.68 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.62 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.62 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.61 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.57 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.55 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.47 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.45 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.43 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.42 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.41 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.4 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.35 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.33 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.31 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.3 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.27 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.26 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.26 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.24 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.16 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.15 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.14 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.1 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.1 | |
| PRK06769 | 173 | hypothetical protein; Validated | 98.05 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.04 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.99 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.88 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.86 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.83 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.8 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.77 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.75 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.72 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.71 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.67 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.67 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.63 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.61 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.57 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.57 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.51 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.5 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.43 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.4 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.38 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.38 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.36 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.32 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.29 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.28 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.21 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.19 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.11 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.07 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.97 | |
| PLN02940 | 382 | riboflavin kinase | 96.94 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.93 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 96.89 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 96.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.81 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.7 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.69 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.68 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.68 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.53 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.51 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.47 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.45 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.45 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.4 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 96.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.27 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.25 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.23 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 96.21 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.18 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.12 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.1 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.07 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.06 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 96.05 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.02 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.89 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 95.7 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.66 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.45 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.39 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.35 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 95.3 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 95.24 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.15 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.14 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.1 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.09 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 95.04 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.93 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 94.86 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.86 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 94.82 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 94.71 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.67 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 94.55 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 94.51 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 94.41 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 94.33 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.3 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.13 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.09 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 94.08 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.02 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 93.93 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 93.9 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 93.86 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 93.7 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.48 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.35 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.11 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 92.93 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.92 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 92.84 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 92.69 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 92.54 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.31 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 91.97 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.45 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.29 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.18 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 90.94 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 90.53 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 90.52 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 90.16 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 89.85 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 89.25 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 89.19 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 88.82 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 88.74 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 88.55 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 88.15 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 87.95 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 87.73 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 87.51 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 87.2 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 86.65 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 86.05 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.97 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 85.91 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 85.87 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 85.78 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 85.56 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 84.05 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 83.71 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 83.69 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 83.62 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 82.98 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.9 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 82.05 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 81.53 | |
| PLN02811 | 220 | hydrolase | 81.48 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 80.94 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 80.9 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 80.29 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-193 Score=1724.75 Aligned_cols=846 Identities=79% Similarity=1.323 Sum_probs=800.6
Q ss_pred CCcccccchhhcccCCCCCcccccccccceeecccccccccccCCCCCCCCCC-CCCCCCcEEEEEcCCccceeeCCCCC
Q 002955 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAP-SSVSQERMIIVGNQLPLRAHRSSDGS 79 (863)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~~~ 79 (863)
|+||||+|||||++||+..++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777665 56677899999999999999986654
Q ss_pred CCeEEEeCCCchHHHhhhcccC-CCceEEEeccCccccchhhhhHHHhhccCceEEEeeCChHhHhhHhhhccccccccc
Q 002955 80 GGWTFSWDEDSLLLQLKDGLGE-DVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPL 158 (863)
Q Consensus 80 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lWpl 158 (863)
++|.|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 6899999999999999998864 378999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh
Q 002955 159 FHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 238 (863)
Q Consensus 159 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 238 (863)
|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888888789999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC
Q 002955 239 IYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL 318 (863)
Q Consensus 239 ~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~ 318 (863)
+||+||||++||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||+++|+++|+|||++.|+..+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhC--CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHH
Q 002955 319 PETEAKVAELQDQFK--GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHA 396 (863)
Q Consensus 319 ~~~~~~~~~l~~~~~--~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 396 (863)
|++..++++++++++ |+++|+||||+||+|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCcc
Q 002955 397 TVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 476 (863)
Q Consensus 397 l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 476 (863)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++.++++++++.+++.+++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888877788999
Q ss_pred EEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHhhcccc
Q 002955 477 LVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRR 556 (863)
Q Consensus 477 lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 556 (863)
||+|||+||+++|+||++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++|++|.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc
Q 002955 557 CWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS 636 (863)
Q Consensus 557 ~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T 636 (863)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++||+++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999986544668999999999999999999999999
Q ss_pred CCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccC
Q 002955 637 GKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA 716 (863)
Q Consensus 637 GR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~ 716 (863)
||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999888889866554466899999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh
Q 002955 717 DPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 796 (863)
Q Consensus 717 d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 796 (863)
||+++..+++++.+++++.+.+.++.+.+|+.++||+|+++|||.|+++|++++...|+++++++||||+.||++||+.+
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999899999999999999888889999999999999999999999999976544589999999999999999999999
Q ss_pred hhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 797 KSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 797 g~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
+....+..+++.++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 86444445666778899999999999999999999999999999987655
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-159 Score=1422.04 Aligned_cols=747 Identities=37% Similarity=0.689 Sum_probs=671.4
Q ss_pred CCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccch-hhhhHHHhhccCceEEEe
Q 002955 58 QERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPA 136 (863)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv 136 (863)
+.|+||||||||+.++++++ |+|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+... +.+|+|+||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV 167 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPV 167 (934)
T ss_pred CCCEEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEE
Confidence 68999999999999988765 689999999999999975 5 568999999999876653 45555444 578999999
Q ss_pred eCChHhHhhHhhhccccccccccccCC-CCCCC-CCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHH
Q 002955 137 FIPPELFSKFYHGFCKQHLWPLFHYML-PLSPD-LGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLP 214 (863)
Q Consensus 137 ~l~~~~~~~~y~gf~~~~lWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp 214 (863)
||+++++++||+||||++|||+|||+. +..+. ...+|++..|++|++||++||++|++.++| +|+|||||||||+||
T Consensus 168 ~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP 246 (934)
T PLN03064 168 FLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLP 246 (934)
T ss_pred eCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHH
Confidence 999999999999999999999999973 22110 114688899999999999999999999998 499999999999999
Q ss_pred HHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEc
Q 002955 215 TFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYF 294 (863)
Q Consensus 215 ~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~ 294 (863)
.|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|+|||++||+|+||++... .++.++
T Consensus 247 ~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~ 322 (934)
T PLN03064 247 KCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQ 322 (934)
T ss_pred HHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998644 258899
Q ss_pred CeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 295 GRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 295 gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
||.++|+++|+|||++.|...+..|++.+++++++++++|+++||||||||++|||.+||+||++||++||+|++|||||
T Consensus 323 Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLv 402 (934)
T PLN03064 323 GRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLL 402 (934)
T ss_pred CEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
||++|+|+++++|+++++++.++|++||++||+.+|+||+++.+.++++|+.|||++|||||+||+|||||||++|||||
T Consensus 403 QIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~ 482 (934)
T PLN03064 403 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (934)
T ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
|.+ +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||
T Consensus 483 ~~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d 547 (934)
T PLN03064 483 QDS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHT 547 (934)
T ss_pred hcC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCC
Confidence 874 47999999999999999 58999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCC----
Q 002955 534 VAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI---- 609 (863)
Q Consensus 534 ~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~---- 609 (863)
+.+|+++|+++|.++..++.. ++. . -+++|+.+.+.++|++++.++|++||||||++..+.
T Consensus 548 ~~~Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~ 612 (934)
T PLN03064 548 AQEWAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRR 612 (934)
T ss_pred HHHHHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccc
Confidence 999999999999988655421 111 1 124799999999999999999999999999985422
Q ss_pred -------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEe-ecCCCCcc
Q 002955 610 -------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFS 681 (863)
Q Consensus 610 -------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~-~~~~~~~~ 681 (863)
...|+++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.++ ..|.. .....+..
T Consensus 613 ~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~ 690 (934)
T PLN03064 613 GDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMD 690 (934)
T ss_pred cccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchH
Confidence 33478999999999999999999999999999999999887 7999999999998764 46874 33333568
Q ss_pred HHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHH-HHHhcCCCeEEEECCcEEEEecCCCCHH
Q 002955 682 WKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKG 760 (863)
Q Consensus 682 w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L-~~~l~~~~~~v~~g~~~vEI~p~gvsKG 760 (863)
|++.+.++|+.|++++||+++|.|+++++|||+.+||+++..|++++.++| +..+.+.++.+..|+.++||+|.++|||
T Consensus 691 W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG 770 (934)
T PLN03064 691 WVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKG 770 (934)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999999999999999999999 4455677899999999999999999999
Q ss_pred HHHHHHHHHHhhcC---CCcceEEEEeCCcc-hHHHHHHhhhhcCCC------------------------------CC-
Q 002955 761 LVAQHQLETMHQKG---MLPDFVLCIGDDRS-DEDMFEVIKSAAAGP------------------------------SL- 805 (863)
Q Consensus 761 ~al~~Ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~------------------------------~~- 805 (863)
.|+++|++++...+ .++|||+|+|||.. ||+||+++....... +.
T Consensus 771 ~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (934)
T PLN03064 771 AAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSK 850 (934)
T ss_pred HHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCcccccccc
Confidence 99999999764322 36899999999875 999999986421100 00
Q ss_pred -------------------------------C----------CCcceEEEEeCCCccccceecCCHhHHHHHHHHHHHhh
Q 002955 806 -------------------------------S----------PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEAS 844 (863)
Q Consensus 806 -------------------------------~----------~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~ 844 (863)
+ ...+.|+|+||.|+|.|+|++++.+||+.+|+.|++.+
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (934)
T PLN03064 851 NSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANAS 930 (934)
T ss_pred ccccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccc
Confidence 0 12345999999999999999999999999999999876
Q ss_pred cC
Q 002955 845 AQ 846 (863)
Q Consensus 845 ~~ 846 (863)
..
T Consensus 931 ~~ 932 (934)
T PLN03064 931 SS 932 (934)
T ss_pred cC
Confidence 54
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-151 Score=1367.46 Aligned_cols=749 Identities=37% Similarity=0.688 Sum_probs=668.3
Q ss_pred CCCCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccch-hhhhHHHhhccCceEE
Q 002955 56 VSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCV 134 (863)
Q Consensus 56 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~ 134 (863)
....|+||||||||+.++++++ |+|++++++|||+++|.+ + ...+++||||+|.+++++ ++..+. ..+.+|+|+
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~~ 82 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALT-ESLAEKGCI 82 (797)
T ss_pred cCCCCEEEEECCCCccceecCC--CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHH-HHhhcCCeE
Confidence 4577999999999999888754 689999999999999975 4 457999999999876554 333333 345789999
Q ss_pred EeeCChHhHhhHhhhccccccccccccC-CCCCCCC-CCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccch
Q 002955 135 PAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDL-GGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMV 212 (863)
Q Consensus 135 pv~l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~-~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~l 212 (863)
|||| ++++++||+||||++|||+|||+ .+..+.. ..+|+++.|++|++||++||++|++.++| +|+|||||||||+
T Consensus 83 pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~l 160 (797)
T PLN03063 83 PVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMF 160 (797)
T ss_pred Eeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhh
Confidence 9999 99999999999999999999998 3322221 14566789999999999999999999998 4999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE
Q 002955 213 LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE 292 (863)
Q Consensus 213 lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~ 292 (863)
||+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++... ++.
T Consensus 161 lp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~ 236 (797)
T PLN03063 161 LPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVV 236 (797)
T ss_pred HHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876442 478
Q ss_pred EcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceE
Q 002955 293 YFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIV 372 (863)
Q Consensus 293 ~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vv 372 (863)
++||.++|.++|+|||++.|......+++.....+++++++++++|++|||+|+.|||.++|+||++||++||+++++++
T Consensus 237 ~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvv 316 (797)
T PLN03063 237 DQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVM 316 (797)
T ss_pred ECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEE
Confidence 99999999999999999999987777777788888999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeee
Q 002955 373 LVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 452 (863)
Q Consensus 373 Lvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~ 452 (863)
||||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++|||
T Consensus 317 Lvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEam 396 (797)
T PLN03063 317 LVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFV 396 (797)
T ss_pred EEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 453 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
||+.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|++++++++.+
T Consensus 397 A~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 397 ACQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred eeecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhh
Confidence 99875 47999999999999999 489999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCC---
Q 002955 532 HDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS--- 608 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--- 608 (863)
||+.+|+++|+++|.++++.+..+. ...+.+|+.+.+.++|++++.++|++||||||++..+
T Consensus 462 ~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~ 526 (797)
T PLN03063 462 HSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI 526 (797)
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc
Confidence 9999999999999999887653211 1234579999999999999999999999999998543
Q ss_pred --CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeec-CCCCccHHHH
Q 002955 609 --ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCV-SVPDFSWKQI 685 (863)
Q Consensus 609 --~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~-~~~~~~w~~~ 685 (863)
....++++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.. +..|.... ...+..|++.
T Consensus 527 ~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~ 604 (797)
T PLN03063 527 KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDG 604 (797)
T ss_pred ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHH
Confidence 235589999999999999999999999999999999999875 799999999999875 45787543 2335689999
Q ss_pred HHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHH-HhcCCCeEEEECCcEEEEecCCCCHHHHHH
Q 002955 686 AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 764 (863)
Q Consensus 686 v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~ 764 (863)
+.++++.|++++||+++|.|++++.|||+++||+++..+++++.++|.+ .+.+.++.+..|+..+||+|.++|||.|++
T Consensus 605 v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~ 684 (797)
T PLN03063 605 VKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIG 684 (797)
T ss_pred HHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHH
Confidence 9999999999999999999999999999999999998999999999844 456677999999999999999999999999
Q ss_pred HHHHHHhhc---CCCcceEEEEeCCc-chHHHHHHhhhhc-C-------CCC-----------CCCCcceEEEEeCCCcc
Q 002955 765 HQLETMHQK---GMLPDFVLCIGDDR-SDEDMFEVIKSAA-A-------GPS-----------LSPVAEVFACTVGQKPS 821 (863)
Q Consensus 765 ~Ll~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~-~-------~~~-----------~~~~~~~~av~vG~~~s 821 (863)
.|++++..+ +..+|+|+|+||+. .||+||++++... . ..+ ....+++|+|+||.++|
T Consensus 685 ~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s 764 (797)
T PLN03063 685 RILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQART 764 (797)
T ss_pred HHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCc
Confidence 999976322 23679999999984 6999999987421 0 000 12345789999999999
Q ss_pred ccceecCCHhHHHHHHHHHHHhhcCc
Q 002955 822 KAKYYLDDTAEILRMLLGLAEASAQD 847 (863)
Q Consensus 822 ~A~y~l~d~~eV~~~L~~L~~~~~~~ 847 (863)
+|+||++|++||.++|+.|++.+.+.
T Consensus 765 ~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 765 KARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred cCeecCCCHHHHHHHHHHHhccCccc
Confidence 99999999999999999999865543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-142 Score=1291.02 Aligned_cols=720 Identities=37% Similarity=0.668 Sum_probs=657.9
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc---hhhhhHHHhhccCceEEE
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL---SEQDEVSQTLLETFKCVP 135 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~p 135 (863)
+|+||||||+|+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+|
T Consensus 1 ~~livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 75 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVP 75 (726)
T ss_pred CCEEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEE
Confidence 489999999999988764 589999999999999987655 5799999999976553 2223333 4467899999
Q ss_pred eeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHH
Q 002955 136 AFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPT 215 (863)
Q Consensus 136 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~ 215 (863)
|||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||.
T Consensus 76 v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~ 149 (726)
T PRK14501 76 VFLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPA 149 (726)
T ss_pred EeCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHH
Confidence 999999999999999999999999999866 48999999999999999999999999984 999999999999999
Q ss_pred HHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcC
Q 002955 216 FLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFG 295 (863)
Q Consensus 216 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 295 (863)
+||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||.+++++++... ++.++|
T Consensus 150 ~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~g 225 (726)
T PRK14501 150 MLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGG 225 (726)
T ss_pred HHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999875432 588999
Q ss_pred eEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 296 RTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 296 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
|.++|+++|+|||++.|.+....+.+....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+|
T Consensus 226 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 305 (726)
T PRK14501 226 RIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQ 305 (726)
T ss_pred EEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999988877888888888998889999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
|+.|+|...++|+++++++.+++++||++||..+|.||+++.+.++++|+.++|++|||||+||++||||||++|||||+
T Consensus 306 v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~ 385 (726)
T PRK14501 306 VAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASR 385 (726)
T ss_pred EecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEc
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
.+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.
T Consensus 386 ~~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~ 450 (726)
T PRK14501 386 TD---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVH 450 (726)
T ss_pred CC---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHH
Confidence 75 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCC--CCCCCC
Q 002955 536 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSP 613 (863)
Q Consensus 536 ~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~ 613 (863)
.|+++|+++|.++++.+.... ...|++++.+.+.++|+.+++|+|++||||||++.. +....+
T Consensus 451 ~w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~ 515 (726)
T PRK14501 451 KWASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVP 515 (726)
T ss_pred HHHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCC
Confidence 999999999999887653211 123567899999999999999999999999999843 234568
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHH
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLY 693 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y 693 (863)
+++++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.|
T Consensus 516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~ 592 (726)
T PRK14501 516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEF 592 (726)
T ss_pred CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHH
Confidence 9999999999988899999999999999999999876 5899999999998654 46765432 3568999999999999
Q ss_pred hhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhc
Q 002955 694 TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQK 773 (863)
Q Consensus 694 ~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~ 773 (863)
.++++|++++.|+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++
T Consensus 593 ~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~----- 667 (726)
T PRK14501 593 VDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE----- 667 (726)
T ss_pred HhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----
Confidence 999999999999999999999999999888889999999988888888899999999999999999999999998
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
++++++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 668 ~~~~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 668 AGPYDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred cCCCCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 56789999999999999999997531 27999999999999999999999999999875
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-132 Score=1161.40 Aligned_cols=728 Identities=55% Similarity=0.976 Sum_probs=688.0
Q ss_pred CCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEee
Q 002955 58 QERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAF 137 (863)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 137 (863)
..|+|+|||+||+.+.+..++ +.|.|+++.+||+.+++.++. +++..||||++.++++++++.+.+.++..++|+||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 79 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVF 79 (732)
T ss_pred CceEEEEEccCceecccccCC-CceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeee
Confidence 569999999999999666555 799999999999999988766 689999999998899999999999999999999999
Q ss_pred CChHhHhhHhhhccccccccccccC-CCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHH
Q 002955 138 IPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTF 216 (863)
Q Consensus 138 l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~ 216 (863)
++++....+|+||||+.|||+|||+ .|..+.+. .|+.+.|++|+++|+.||+++++.++ ++|+|||||||||++|+|
T Consensus 80 ~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~ 157 (732)
T KOG1050|consen 80 LDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQM 157 (732)
T ss_pred cCCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchh
Confidence 9999999999999999999999999 67666654 78899999999999999999999999 579999999999999999
Q ss_pred HHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCe
Q 002955 217 LRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 296 (863)
Q Consensus 217 lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 296 (863)
+|++.++++||||+|+|||++|+|||+|.|+|||+||++||+|||||++|+|||++||.|++++++.++.+..++.+.||
T Consensus 158 lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr 237 (732)
T KOG1050|consen 158 LRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGR 237 (732)
T ss_pred hhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEE
Q 002955 297 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 376 (863)
Q Consensus 297 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 376 (863)
.+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||
T Consensus 238 ~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi 317 (732)
T KOG1050|consen 238 DVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQI 317 (732)
T ss_pred eeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeec
Q 002955 377 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 456 (863)
Q Consensus 377 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 456 (863)
++|+++++++|++++.++..++.+||++||+..++||+++...++..++.|+|.+||||+++++||||||+++||++|++
T Consensus 318 ~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~ 397 (732)
T KOG1050|consen 318 ENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQE 397 (732)
T ss_pred ecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 457 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
. +.+++|+|||+|+++.+ ++++++||||.+++|.+|..||+|+++|++.|+.+++.++..|++.
T Consensus 398 ~---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~ 462 (732)
T KOG1050|consen 398 N---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVV 462 (732)
T ss_pred c---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHH
Confidence 5 47999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCH
Q 002955 536 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNA 615 (863)
Q Consensus 536 ~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~ 615 (863)
+|+..|++.| ++||+.|+ +.+++..+ |+.+.++..|+++++|+|++|||||+++..+..
T Consensus 463 ~W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~----- 521 (732)
T KOG1050|consen 463 YWAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK----- 521 (732)
T ss_pred HHHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch-----
Confidence 9999999833 45788888 88887665 889999999999999999999999999854322
Q ss_pred HHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhh
Q 002955 616 EAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 695 (863)
Q Consensus 616 ~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~ 695 (863)
++..|+.||.+++|.|+|+|||++..+..|+..++++|++||||++++.+++ |.+.. .+.+|++.+++++++|++
T Consensus 522 -~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~e 596 (732)
T KOG1050|consen 522 -AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTE 596 (732)
T ss_pred -HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 99887 788999999999999999
Q ss_pred cCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC
Q 002955 696 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM 775 (863)
Q Consensus 696 ~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi 775 (863)
+|||+++|.|+++++|||+++||+++..||++++++|+. .+.++.+..|+..|||.|.|+|||.++..++..+ .-
T Consensus 597 rt~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~ 671 (732)
T KOG1050|consen 597 RTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VK 671 (732)
T ss_pred cCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CC
Confidence 999999999999999999999999999999999999998 7889999999999999999999999999999998 56
Q ss_pred CcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHH
Q 002955 776 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838 (863)
Q Consensus 776 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~ 838 (863)
++|+++|+||+..|++||..+......... ...|+|++|.++|+|+|+++++.+|+++|+
T Consensus 672 ~~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 672 EPDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred CcceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 679999999999999999999875432221 578999999999999999999999999886
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-122 Score=1031.72 Aligned_cols=455 Identities=30% Similarity=0.566 Sum_probs=420.6
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeC
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 138 (863)
+|+||||||+|+.. + + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 2 ~rLivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E---H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCEEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 68999999999622 1 1 3456899999998775 4799999999964322 2223333346799999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
+++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 5899999999999999999999999998 4999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876432 2467889999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
+|+++|+|||++.|...+..+ ...++++++++++|+++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887765 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||++
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002955 539 RSFLQDLERACR 550 (863)
Q Consensus 539 ~~~l~~l~~~~~ 550 (863)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998754
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-120 Score=1028.30 Aligned_cols=463 Identities=27% Similarity=0.477 Sum_probs=428.5
Q ss_pred EEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc-hhh-hhHHHhhccCceEEEeeCChH
Q 002955 64 VGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL-SEQ-DEVSQTLLETFKCVPAFIPPE 141 (863)
Q Consensus 64 vsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 141 (863)
||||||+.++++++|..+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999997654235888999999999999877656789999999975221 111 112222245799999999999
Q ss_pred hHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhC
Q 002955 142 LFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRF 221 (863)
Q Consensus 142 ~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~ 221 (863)
+++.||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5899999999999999999999999998 5999999999999999999999
Q ss_pred CCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccC---------------
Q 002955 222 NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKR--------------- 286 (863)
Q Consensus 222 ~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 286 (863)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhC
Q 002955 287 --GYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN 364 (863)
Q Consensus 287 --~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~ 364 (863)
..+++.++||+++|+++|+|||++.|...+..+++.++++++|+++.|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCC
Q 002955 365 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGM 444 (863)
Q Consensus 365 p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 444 (863)
|+++||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002955 445 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 524 (863)
Q Consensus 445 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 524 (863)
|||++||||||++ ++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999874 4799999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCHHHHHHHHHHHHHH
Q 002955 525 HYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 525 ~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
++++|.+||+.+|+++||.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-120 Score=1036.38 Aligned_cols=467 Identities=46% Similarity=0.882 Sum_probs=359.9
Q ss_pred cEEEEEcCCccceeeCCCCCCC--eEEEeCCCchHHHhhhcccCCCceEEEeccCccccchh--hhhHHHhhccCceEEE
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGG--WTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE--QDEVSQTLLETFKCVP 135 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~p 135 (863)
|+||||||||+.++++++. |. |+++.+.|||+++|.+.+ +..+++||||+|.+.+..+ ++.+.+.+.++|+|+|
T Consensus 2 ~livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~p 79 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVP 79 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEE
T ss_pred Ccccccccccccccccccc-cccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEE
Confidence 7999999999999998733 45 888888999999997644 4589999999998876554 5667777889999999
Q ss_pred eeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHH
Q 002955 136 AFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPT 215 (863)
Q Consensus 136 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~ 215 (863)
|||+++++++||+||||++|||+|||.++..|+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 80 V~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~ 157 (474)
T PF00982_consen 80 VFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQ 157 (474)
T ss_dssp EEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHH
T ss_pred EEcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHH
Confidence 9999999999999999999999999987622222 6899999999999999999999999997 5999999999999999
Q ss_pred HHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcC
Q 002955 216 FLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFG 295 (863)
Q Consensus 216 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 295 (863)
+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++|
T Consensus 158 ~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~G 235 (474)
T PF00982_consen 158 MLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNG 235 (474)
T ss_dssp HHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETT
T ss_pred HHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888766 689999
Q ss_pred eEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 296 RTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 296 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
|.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+
T Consensus 236 r~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~li 315 (474)
T PF00982_consen 236 RRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLI 315 (474)
T ss_dssp EEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEE
T ss_pred EEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEE
Confidence 999999999999999999999999999999999999988 4999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.|+|++||||++||+|||||||++||++|
T Consensus 316 Qi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~ 395 (474)
T PF00982_consen 316 QIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVAC 395 (474)
T ss_dssp EE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHH
T ss_pred EEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccCC-CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
|++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||
T Consensus 396 q~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~ 460 (474)
T PF00982_consen 396 QDD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHD 460 (474)
T ss_dssp S-T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-
T ss_pred ecC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCC
Confidence 885 479999999999999997 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002955 534 VAYWARSFLQDLER 547 (863)
Q Consensus 534 ~~~W~~~~l~~l~~ 547 (863)
+.+|+++||++|++
T Consensus 461 ~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 461 VQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-115 Score=969.69 Aligned_cols=467 Identities=40% Similarity=0.705 Sum_probs=433.1
Q ss_pred CCCCCCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceE
Q 002955 54 SSVSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKC 133 (863)
Q Consensus 54 ~~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~ 133 (863)
+.....|+|+||||+|+...+..++ +...+..+.|||+++|++.+ ...+++|+||+|...++.+..........++..
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~ 87 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTS 87 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceE
Confidence 3456789999999999998766655 67888999999999997754 458999999999776433323333334568999
Q ss_pred EEeeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchH
Q 002955 134 VPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVL 213 (863)
Q Consensus 134 ~pv~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~ll 213 (863)
.||+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+||
T Consensus 88 ~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~ 161 (486)
T COG0380 88 APVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLV 161 (486)
T ss_pred EEEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhh
Confidence 99999999999999999999999999999875 58999999999999999999999999984 9999999999999
Q ss_pred HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE-
Q 002955 214 PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE- 292 (863)
Q Consensus 214 p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~- 292 (863)
|.|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 162 P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~ 236 (486)
T COG0380 162 PQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRF 236 (486)
T ss_pred HHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred --EcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC
Q 002955 293 --YFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG 369 (863)
Q Consensus 293 --~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~ 369 (863)
++||.+.+.++|+|||+..|...+.++.+..+..++++.+.+ +++|+||||+||.|||.++++||++||++||+|+|
T Consensus 237 ~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~ 316 (486)
T COG0380 237 NGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRG 316 (486)
T ss_pred cccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhC
Confidence 448999999999999999999999999998999999999976 99999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccce
Q 002955 370 KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPY 449 (863)
Q Consensus 370 ~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~ 449 (863)
||+|+||+.|+|++.++|+.++.+++.+|++||++||+.+|+||+|++++++++++.+||++||++++||+|||||||++
T Consensus 317 kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvak 396 (486)
T COG0380 317 KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAK 396 (486)
T ss_pred ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh
Q 002955 450 EYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV 529 (863)
Q Consensus 450 Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 529 (863)
||+|||.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|
T Consensus 397 EyVa~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v 461 (486)
T COG0380 397 EYVAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQV 461 (486)
T ss_pred HHHHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999874 479999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q 002955 530 STHDVAYWARSFLQDLERA 548 (863)
Q Consensus 530 ~~~~~~~W~~~~l~~l~~~ 548 (863)
.+||+++|+++|+.+|.+.
T Consensus 462 ~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 462 LTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HhhhHHHHHHHHHHHHHhc
Confidence 9999999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-107 Score=935.25 Aligned_cols=454 Identities=40% Similarity=0.716 Sum_probs=423.6
Q ss_pred cEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc-hhhhhHHHhhccCceEEEeeC
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL-SEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l 138 (863)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||
T Consensus 1 ~livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l 72 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFL 72 (456)
T ss_pred CEEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEEC
Confidence 7999999999987654 2 56678999999988665 4799999999976553 333445555678899999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
++++++.||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||
T Consensus 73 ~~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr 146 (456)
T TIGR02400 73 SEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLR 146 (456)
T ss_pred CHHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHH
Confidence 999999999999999999999999654 5899999999999999999999999997 5999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.+
T Consensus 147 ~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~ 222 (456)
T TIGR02400 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTV 222 (456)
T ss_pred hhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976543 467889999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
+|.++|+|||++.|.+....+.+.+..++++++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.
T Consensus 223 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~ 302 (456)
T TIGR02400 223 RVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAV 302 (456)
T ss_pred EEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEec
Confidence 99999999999999988877888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|+|+++++|+++++++++++++||++||..+|.||+++.+.++.+|+.++|++|||||+||++||||||++|||||+.+
T Consensus 303 p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P- 381 (456)
T TIGR02400 303 PSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP- 381 (456)
T ss_pred CCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
+.|+||+|+++|+++.+.+|++|||||++++|+||.++|+|+.+||+.|++++++++.+||+.+|+
T Consensus 382 --------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~ 447 (456)
T TIGR02400 382 --------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWR 447 (456)
T ss_pred --------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHH
Confidence 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002955 539 RSFLQDLE 546 (863)
Q Consensus 539 ~~~l~~l~ 546 (863)
++|+.+|.
T Consensus 448 ~~~l~~l~ 455 (456)
T TIGR02400 448 EDFLSDLN 455 (456)
T ss_pred HHHHHHhh
Confidence 99999885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-98 Score=862.31 Aligned_cols=459 Identities=47% Similarity=0.811 Sum_probs=428.9
Q ss_pred cEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeCC
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIP 139 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 139 (863)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+..+++.+.+...++|+|+|||++
T Consensus 1 ~li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 77 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLS 77 (460)
T ss_pred CEEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCC
Confidence 689999999999999876 589999999999999987554 57999999999877654444455566789999999999
Q ss_pred hHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHh
Q 002955 140 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 219 (863)
Q Consensus 140 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~ 219 (863)
+++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||+
T Consensus 78 ~~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~ 151 (460)
T cd03788 78 PEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRE 151 (460)
T ss_pred HHHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHh
Confidence 99999999999999999999999876 5899999999999999999999999997 59999999999999999999
Q ss_pred hCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEE
Q 002955 220 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299 (863)
Q Consensus 220 ~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 299 (863)
+.|+++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++..... .+.++|+.++
T Consensus 152 ~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~ 228 (460)
T cd03788 152 RGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVR 228 (460)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998865532 6889999999
Q ss_pred EEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecC
Q 002955 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 379 (863)
Q Consensus 300 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 379 (863)
|.++|+|||++.|......+....+.++++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|||.|
T Consensus 229 i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~ 308 (460)
T cd03788 229 VGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVP 308 (460)
T ss_pred EEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccC
Confidence 99999999999999877666666666777777789999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCc
Q 002955 380 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 459 (863)
Q Consensus 380 ~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 459 (863)
+|+++++++++++++.+++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 309 ~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p-- 386 (460)
T cd03788 309 SRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD-- 386 (460)
T ss_pred CCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 002955 460 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539 (863)
Q Consensus 460 ~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 539 (863)
++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++|+..|++
T Consensus 387 -------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~ 453 (460)
T cd03788 387 -------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWAN 453 (460)
T ss_pred -------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4799999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 002955 540 SFLQDL 545 (863)
Q Consensus 540 ~~l~~l 545 (863)
+|+++|
T Consensus 454 ~~l~~l 459 (460)
T cd03788 454 SFLDDL 459 (460)
T ss_pred HHHHhh
Confidence 999987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=345.04 Aligned_cols=542 Identities=13% Similarity=0.114 Sum_probs=324.5
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh-----------------cCCChHHH-HHHHHhCCEeccc
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR-----------------TLPIRDEL-LRALLNADLIGFH 262 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----------------~lp~r~ei-l~~ll~~dligF~ 262 (863)
|+|+-|+++--.+...|++++ ++|..++.|.- ..+-++ .++.|-++ -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888877 68999999963 111111 11222221 1346678998877
Q ss_pred CHHHHHHHHHHHH-------hhhCceecccCceeeEEEcCe-EEEEEEeccccCchHHHhhcCCchH-------------
Q 002955 263 TFDYARHFLSCCS-------RMLGVSYQSKRGYIGLEYFGR-TVSIKILPVGIHIGQLQSVLNLPET------------- 321 (863)
Q Consensus 263 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 321 (863)
|..-...-...-. |.|.. ...+ ++..+|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7766553222100 11100 0111 2333343 2388899999999999753211100
Q ss_pred HHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhH----HHHHHHHH
Q 002955 322 EAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDV----QEVQSETH 395 (863)
Q Consensus 322 ~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~~~~~v~ 395 (863)
.....+++..+ +++++||+|+|+++.||+..+|+||.++.+..+.. ++++ .+|... ..... .....++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 01122344333 67889999999999999999999999987543321 2333 345321 11110 12234455
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----cceeecccccCCCccceeeeeeecCCcccccccCCCCCC
Q 002955 396 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST 471 (863)
Q Consensus 396 ~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 471 (863)
+++++. + ....+.|.|+++.+++.++|+.| ||||+||.+|||||+++|||||
T Consensus 539 ~li~~l----g---L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDKY----D---LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHHh----C---CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 555544 2 23345677899999999999998 6999999999999999999999
Q ss_pred CCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 472 AKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 472 ~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...++.++.+..+++...++.+++.+...
T Consensus 595 --GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 595 --GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred --CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 56799999999888773 599999999999999999999754 444445555677788899999999999888876
Q ss_pred HHhhcc-cccc-----c-----cC--------cCcceeEeecCccccc----------CC----HHHHHHHHHh------
Q 002955 549 CRDHMR-RRCW-----G-----IG--------FGLGFRVVALDPNFRK----------LS----IDHIVSAYKR------ 589 (863)
Q Consensus 549 ~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~~~~f~~----------l~----~~~i~~~y~~------ 589 (863)
...+.. ++.. . .+ ++|++.+ |-.... ++ ...+..+-++
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 0 01 0111110 000000 01 0111111111
Q ss_pred -------------------cccceeE--ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 590 -------------------TKNRAIL--LDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 590 -------------------s~~rlI~--~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
...++|+ +|+|+| .. ....-.++++++++-.....+.|+++|||+...+...+.
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~ 823 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLK 823 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHH
Confidence 1135666 899999 32 111122333333321123458899999999999999886
Q ss_pred cc--C---CceEEccCcEEEEeCCc-----eeEEee---cCCCCccHH-HHHHHHHHHHhhc--------CCCceeeecc
Q 002955 649 SC--E---GLGIAAEHGYFVRPNYG-----VDWETC---VSVPDFSWK-QIAEPVMKLYTET--------TDGSTIETKE 706 (863)
Q Consensus 649 ~l--~---~l~liaenGa~I~~~~~-----~~w~~~---~~~~~~~w~-~~v~~i~~~y~~~--------~~gs~ie~k~ 706 (863)
.. + ...+||.-|..|+++.. ..|..- ....+..|. +.++..+..+... .++...+..+
T Consensus 824 ~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~ 903 (1050)
T TIGR02468 824 SGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEE 903 (1050)
T ss_pred hCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChh
Confidence 53 3 34579999999988621 112110 001123452 2233333333321 1223333333
Q ss_pred ce--eEeecccCCCCcchhhHHHHHHHHHHHhcCCCe-EEEE-CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEE
Q 002955 707 SA--LVWNFQYADPDFGSCQAKELLDHLESVLANEPV-SVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLC 782 (863)
Q Consensus 707 ~~--l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~-~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vla 782 (863)
.+ ....|.-.|++.. ...+++.+.|+.. .... .+++ +..+++|.|..+|||.|+++|+.++ |++.+++++
T Consensus 904 ~q~~~k~SY~v~d~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~V 977 (1050)
T TIGR02468 904 SSTDHCYAFKVKDPSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAV 977 (1050)
T ss_pred hCCCceEEEEecCcccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEE
Confidence 22 2222321233221 2234444444432 1122 2233 4589999999999999999999999 999999955
Q ss_pred -EeCCcc-h-HHHHHHh
Q 002955 783 -IGDDRS-D-EDMFEVI 796 (863)
Q Consensus 783 -iGD~~N-D-~~Mf~~a 796 (863)
+||+.| | ++|+.-.
T Consensus 978 faGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 978 FVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EeccCCCCCHHHHhCCc
Confidence 999999 9 5565433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=287.36 Aligned_cols=249 Identities=31% Similarity=0.508 Sum_probs=214.7
Q ss_pred CHHHHHHHHHhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEE
Q 002955 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIA 656 (863)
Q Consensus 579 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~li 656 (863)
....+.+.|..+++++|++||||||++.. +....++++++++|++|+.++++.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 34556677899999999999999999854 34567899999999999999999999999999999999998 7899999
Q ss_pred ccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHh
Q 002955 657 AEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVL 736 (863)
Q Consensus 657 aenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l 736 (863)
|+||++++...+..|+......+..|++.+..+++.|.+++||+++|.|..++.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999888888888877777778999999999999999999999999999999999997765443333222222
Q ss_pred cCCC-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE
Q 002955 737 ANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 815 (863)
Q Consensus 737 ~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 815 (863)
.+.. +.+..|+..||++|.++|||.++++++++. ....++++|.|||.+|++||++++.+- .+++.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 1223 889999999999999999999999999987 555578999999999999999998742 26899
Q ss_pred eCCCccccceecCCHhHHHHHHHHHHHhhc
Q 002955 816 VGQKPSKAKYYLDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 816 vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~ 845 (863)
+|...+.|++.+.........|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999999888765
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=297.07 Aligned_cols=227 Identities=39% Similarity=0.673 Sum_probs=154.1
Q ss_pred EecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEe
Q 002955 596 LLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET 673 (863)
Q Consensus 596 ~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~ 673 (863)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+ +.+..+++++++++||++++.++...|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 6999999998542 44578999999999999999999999999999994 44446789999999999999999888887
Q ss_pred ecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCC-CeEEEECCcEEEE
Q 002955 674 CVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE-PVSVKSGPNIVEV 752 (863)
Q Consensus 674 ~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 752 (863)
.....+..|++.+.++++.|.++++|+++|.|++++.|||+.++++++..++.++.+++.+.+... ++.+..|+.+|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555556689999999999999999999999999999999999999998889999999999887765 7999999999999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-----CCccccceec
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-----QKPSKAKYYL 827 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~A~y~l 827 (863)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ..-+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987322334789999999999999999998641 011455555 4689999999
Q ss_pred CCHh
Q 002955 828 DDTA 831 (863)
Q Consensus 828 ~d~~ 831 (863)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9863
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=285.27 Aligned_cols=237 Identities=29% Similarity=0.415 Sum_probs=195.4
Q ss_pred cccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCC
Q 002955 590 TKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNY 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~ 667 (863)
+++++|+|||||||++.. +....+++++.++|++|++++++.|+|+|||+...+...+ ..++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 467899999999999843 3445688999999999999999999999999988877655 3467999999999998744
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccC-CCCcchhhHHHHHHHHHHHhcCCCeEEEE
Q 002955 668 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA-DPDFGSCQAKELLDHLESVLANEPVSVKS 745 (863)
Q Consensus 668 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~-d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 745 (863)
.. .|... ......|++.+.++++.|.++ +|+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 45543 222246888888998888887 9999999999999999998 77777667766666553 334688899
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe--CCCcccc
Q 002955 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV--GQKPSKA 823 (863)
Q Consensus 746 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 823 (863)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+.... .....+++.| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 0112367888 8889999
Q ss_pred ceecCCHhHHHHHHHHHH
Q 002955 824 KYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 824 ~y~l~d~~eV~~~L~~L~ 841 (863)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=284.06 Aligned_cols=234 Identities=20% Similarity=0.237 Sum_probs=187.1
Q ss_pred cceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCce
Q 002955 592 NRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~ 669 (863)
.++|++||||||++.. +....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 4799999999999842 2356889999999999966689999999999999999999765 467999999999876554
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcE
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 749 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 749 (863)
.+... .+.++.+.+...++.+.++++|+++|.|+..+.+||+.++ +. .....++.+.+.+.+. .+.+.+|+.+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 33222 2334555555556667788899999999999999998763 21 1112222233322222 3677789999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCC
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 829 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d 829 (863)
+||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++++
T Consensus 166 lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~~ 232 (266)
T PRK10187 166 VEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLAG 232 (266)
T ss_pred EEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCCC
Confidence 999999999999999999999 99999999999999999999999532 12689999999999999999
Q ss_pred HhHHHHHHHHHHHhhcC
Q 002955 830 TAEILRMLLGLAEASAQ 846 (863)
Q Consensus 830 ~~eV~~~L~~L~~~~~~ 846 (863)
+++|..+|+.|+...+.
T Consensus 233 ~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 233 VPDVWSWLEMITTAQQQ 249 (266)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999987774
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-31 Score=287.04 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=196.4
Q ss_pred HHHHHHHHhcccceeEecCCccccCCCC-CC-CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEcc
Q 002955 581 DHIVSAYKRTKNRAILLDYDGTIMVPGS-IS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 658 (863)
Q Consensus 581 ~~i~~~y~~s~~rlI~~DlDGTLl~~~~-~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liae 658 (863)
+.++.. .+.+..+||+||||||++..+ .+ ..+++++.++|++|+ +++.|+|+|||+...+.+++. +..++++++
T Consensus 101 ~~~~~~-~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIMEA-SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHHHH-hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 444443 355678999999999996442 23 379999999999995 578999999999999999964 467899999
Q ss_pred CcEEEEeCCceeEEe------ecCCCCccHHHHHHHH---HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHH
Q 002955 659 HGYFVRPNYGVDWET------CVSVPDFSWKQIAEPV---MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELL 729 (863)
Q Consensus 659 nGa~I~~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~ 729 (863)
||+.++.+++..+.. ........|...+.++ +..++++++|+++|+|.+++.||||++++. .+.++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHH
Confidence 999998765432110 1112223466666665 556777899999999999999999998664 346677
Q ss_pred HHHHHHhcCCC-eEEEECCcEEEEecC-CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCC
Q 002955 730 DHLESVLANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSP 807 (863)
Q Consensus 730 ~~L~~~l~~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~ 807 (863)
.++...+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~------- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG------- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC-------
Confidence 77888787766 789999999999995 999999999999988222222568999999999999999996421
Q ss_pred CcceEEEEeC--CCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 808 VAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 808 ~~~~~av~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
..++|.|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 326 --~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 326 --EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred --CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 23899999 57899999999999999999999987654
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=284.54 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=194.8
Q ss_pred HhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEe
Q 002955 588 KRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 665 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~ 665 (863)
.+.+..+||+||||||++.. +....++++++++|++|++ +..|+|+|||+...+.++++ ++.++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 45567899999999999743 2445789999999999974 56999999999999999996 4679999999999987
Q ss_pred CC-ceeEEe----ecCCCCccHHHHHHHHHHHH---hhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhc
Q 002955 666 NY-GVDWET----CVSVPDFSWKQIAEPVMKLY---TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 737 (863)
Q Consensus 666 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~y---~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~ 737 (863)
++ +..|+. ........|...+.++++.+ ++++||+++|.|.+++.||||.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 345542 11123446887777776655 46789999999999999999998654 33566777887777
Q ss_pred CCC-eEEEECCcEEEEecC-CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE
Q 002955 738 NEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 815 (863)
Q Consensus 738 ~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 815 (863)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999995 999999999999987222233468999999999999999986421 115677
Q ss_pred eC--CCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 816 VG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 816 vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
|| .++|.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 77 68899999999999999999999976543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=286.96 Aligned_cols=242 Identities=25% Similarity=0.372 Sum_probs=189.2
Q ss_pred HHHHhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
.+|.+.+.+++|+||||||.+.. +....++++++++|++|+++ ..|+|+|||++..+.++++. ..++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 36889999999999999999854 35567899999999999776 47999999999999999974 579999999999
Q ss_pred EEeCCc----eeEEeec------------CCCCccHHHHHHHHHHH---HhhcCCCceeeeccceeEeecccCCCCcchh
Q 002955 663 VRPNYG----VDWETCV------------SVPDFSWKQIAEPVMKL---YTETTDGSTIETKESALVWNFQYADPDFGSC 723 (863)
Q Consensus 663 I~~~~~----~~w~~~~------------~~~~~~w~~~v~~i~~~---y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~ 723 (863)
++.+.+ ..|...+ ......|...+.++++. ++++++|+++|.|.+++.||||++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1222211 11134577666666555 5567799999999999999999997776444
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEECCcEEEEec-CCCCHHHHHHHHHHHHhhcCCCcc-e--EEEEeCCcchHHHHHHhhh
Q 002955 724 QAKELLDHLESVLANEP-VSVKSGPNIVEVKP-QGVNKGLVAQHQLETMHQKGMLPD-F--VLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 798 (863)
++.++ ...+.+.+ +.+..|+.++||+| .++|||.|+++|++++ |++.+ + ++|||||.||++||+.+..
T Consensus 269 ~~~~l----~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCV----HDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHH----HHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 44433 34444444 78889999999999 5999999999999998 87654 3 4999999999999999754
Q ss_pred hcCCCCCCCCcceEEEEeC--CCccccceecCCHhHHHHHHHHHHHhhc
Q 002955 799 AAAGPSLSPVAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 799 ~~~~~~~~~~~~~~av~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~ 845 (863)
..+ .++|+|| .+.+.|+|+++++++|.++|+.|+....
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 210 1456665 5789999999999999999999988654
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-26 Score=244.05 Aligned_cols=226 Identities=19% Similarity=0.252 Sum_probs=158.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC-ceEEccCcEEEEeCCc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG-LGIAAEHGYFVRPNYG 668 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~-l~liaenGa~I~~~~~ 668 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.- ..++++||++|.+.+.
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5689999999999999 6778999999999998 899999999999999999999988743 3699999999999855
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--CCCceeeeccce------------eEe-e----cccC---CC------Cc
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIETKESA------------LVW-N----FQYA---DP------DF 720 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~--~~gs~ie~k~~~------------l~~-~----y~~~---d~------~~ 720 (863)
..+...++ .+.+..+++...+. ....+....... ... + .... +. ..
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 55444332 23344444433221 011111100000 000 0 0000 00 00
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCcE-EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 721 GSCQAKELLDHLESVLANEPVSVKSGPNI-VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~-vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......++...+.+.+......+.++..+ +||+|+|+|||.|+++|++++ |+++++|++|||+.||++||+.+|++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCee
Confidence 01223444455555555445566665554 999999999999999999999 99999999999999999999999975
Q ss_pred cCCCCCCCCcceEEEEeCCC----ccccceec--CCHhHHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTAEILRMLLGLAE 842 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~eV~~~L~~L~~ 842 (863)
|+||+. +..|++++ ++.++|.+.|+++..
T Consensus 228 --------------vam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 228 --------------VAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred --------------eeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 445543 56778664 467899999998753
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=243.11 Aligned_cols=225 Identities=18% Similarity=0.222 Sum_probs=153.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC----ceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG----LGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~----l~liaenGa~I~~ 665 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+++..+.- .++|+.||+.|..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4589999999999999 6788999999999998 889999999999999999998877631 3589999999986
Q ss_pred C--CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccce-----------eEeecc---cCCCC--
Q 002955 666 N--YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESA-----------LVWNFQ---YADPD-- 719 (863)
Q Consensus 666 ~--~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~-----------l~~~y~---~~d~~-- 719 (863)
. +...+...++.. .+..+++...+. ..+.+...+... ....+. ..++.
T Consensus 77 ~~~~~~i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (270)
T PRK10513 77 AADGETVAQTALSYD------DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQ 150 (270)
T ss_pred CCCCCEEEecCCCHH------HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCC
Confidence 3 334454443322 222222221110 111121111100 000000 00000
Q ss_pred c------c-hhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHH
Q 002955 720 F------G-SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 792 (863)
Q Consensus 720 ~------~-~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 792 (863)
+ . .....++.+.+.+.+......+.++..++||+|+|+|||.|+++|++++ |++++++++|||+.||++|
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 151 FPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred ceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 0 1122233334443333322345667789999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 793 FEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 793 f~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
|+.+|.+ ++||+. +..|+|++. +.++|.++|+++.
T Consensus 228 l~~ag~~--------------vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGVG--------------VAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCce--------------EEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 9999975 445543 578999874 5788999999874
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-26 Score=243.61 Aligned_cols=224 Identities=16% Similarity=0.206 Sum_probs=152.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEe-CCce
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRP-NYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~-~~~~ 669 (863)
+|+|++||||||++ .++.++++++++|++| +++|+.|++||||+...+.+++..+. ...+++.||+.|+. .+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 79999999999998 6788999999999998 88999999999999999999988763 34689999999986 3333
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccc---------eeEee---cccCC-CCc-------c
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKES---------ALVWN---FQYAD-PDF-------G 721 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~---------~l~~~---y~~~d-~~~-------~ 721 (863)
.+...++. +.+..+++...+. ..+.+...... ..... +.... ... .
T Consensus 78 l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 44443322 2233333222111 01111110000 00000 00000 000 0
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcC
Q 002955 722 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 722 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
.....++...+.+.+......+.++..++||+|+++|||+|+++|++++ |++++++++|||+.||++||+.+|.+
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~~-- 226 (272)
T PRK15126 152 HDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGRG-- 226 (272)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCCc--
Confidence 1222344444554444333344566789999999999999999999999 99999999999999999999999985
Q ss_pred CCCCCCCcceEEEEeCCC----ccccce--ec--CCHhHHHHHHHHHHH
Q 002955 802 GPSLSPVAEVFACTVGQK----PSKAKY--YL--DDTAEILRMLLGLAE 842 (863)
Q Consensus 802 ~~~~~~~~~~~av~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~~ 842 (863)
++||+. +..|+| ++ ++.++|.++|+++..
T Consensus 227 ------------vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 227 ------------FIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------eeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 444443 566776 44 467899999999873
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=243.58 Aligned_cols=223 Identities=14% Similarity=0.155 Sum_probs=150.4
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-Cce
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~~~ 669 (863)
+|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+++..+. ..++|+.||+.|... +..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 68999999999999 6788999999999998 89999999999999999999887763 346899999999864 333
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhc---------CCCceeeeccc-----------eeEee-cccCCC-Cc-------
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTET---------TDGSTIETKES-----------ALVWN-FQYADP-DF------- 720 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~---------~~gs~ie~k~~-----------~l~~~-y~~~d~-~~------- 720 (863)
.+...++ .+.+.++++...+. ..+.++..... ..... ...... ..
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 3333322 12333443332211 11111110000 00000 000000 00
Q ss_pred -chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 721 -GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 -~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......++.+.+.+.+......+.++..++||+|+++|||.|+++|++++ |+++++|+||||+.||++||+.+|.+
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~~ 228 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGKG 228 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCCC
Confidence 01112233344444443322344567789999999999999999999999 99999999999999999999999986
Q ss_pred cCCCCCCCCcceEEEEeCCC----ccccc--eec--CCHhHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQK----PSKAK--YYL--DDTAEILRMLLGLA 841 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~----~s~A~--y~l--~d~~eV~~~L~~L~ 841 (863)
+ +||+. +..|+ +++ ++.++|.++|+++.
T Consensus 229 v--------------Am~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 229 C--------------IMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred e--------------eecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 3 44442 46666 555 46788999999875
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=228.11 Aligned_cols=216 Identities=21% Similarity=0.202 Sum_probs=147.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC--
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-- 666 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-- 666 (863)
|++|+|++||||||++ .++.+++++.++|++| +++|+.|+|||||+...+.+++..+. +.++|++||+++...
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4579999999999998 6778999999999998 88999999999999999998887663 346899999999875
Q ss_pred CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeecc--cee--EeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 667 YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKE--SAL--VWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 667 ~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~--~~l--~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
+...+...++ ...+.+....+.|... ...+.... ... ...+.. ....++.+.++.. ...+.
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~~ 141 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDLE 141 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcEE
Confidence 3333433221 1222222222222111 00000000 000 000000 0112222333322 12345
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+ ++||+.
T Consensus 142 ~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~--------------vam~Na~~~ 204 (230)
T PRK01158 142 IVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGFG--------------VAVANADEE 204 (230)
T ss_pred EEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCce--------------EEecCccHH
Confidence 5555678999999999999999999999 99999999999999999999999875 445543
Q ss_pred -ccccceecC--CHhHHHHHHHHHH
Q 002955 820 -PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 820 -~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
+..|+|++. +.++|.+.|+++.
T Consensus 205 vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 205 LKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHhcceEecCCCcChHHHHHHHHh
Confidence 577899874 5788999998763
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=232.97 Aligned_cols=236 Identities=17% Similarity=0.130 Sum_probs=151.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC--CceEEccCcEEEEeCCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--GLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~--~l~liaenGa~I~~~~~ 668 (863)
.+++|++|+||||++ .++.++++++++|++| +++|+.|++||||+...+.+++..+. ..++|++||+.|+.+..
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999998 5677899999999998 88999999999999999999988773 24699999999987643
Q ss_pred e-------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce-eeeccc-----eeEe-e-----cccCCCC---cchhhHH
Q 002955 669 V-------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST-IETKES-----ALVW-N-----FQYADPD---FGSCQAK 726 (863)
Q Consensus 669 ~-------~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~-ie~k~~-----~l~~-~-----y~~~d~~---~~~~~a~ 726 (863)
. .+...++ .+.+..+++...+...-.+ ...... .... . ....... +......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1121121 1233333333221100000 000000 0000 0 0000000 0000001
Q ss_pred HHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC---CcceEEEEeCCcchHHHHHHhhhhcCCC
Q 002955 727 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM---LPDFVLCIGDDRSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 727 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~~~ 803 (863)
+.+..+.+.+....+.+..+..++||+|+++|||.|+++|++++ |+ ++++|++|||+.||++||+.+|.+++|+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 11222333332224455556679999999999999999999999 99 9999999999999999999999865554
Q ss_pred CCCCCcceEEEEeCCCccccceecC--CHhHHHHHHHHHHHh
Q 002955 804 SLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRMLLGLAEA 843 (863)
Q Consensus 804 ~~~~~~~~~av~vG~~~s~A~y~l~--d~~eV~~~L~~L~~~ 843 (863)
+...... +.-+.+..|.|+++ +.+++.+.|+.+..+
T Consensus 233 ~~~~~~~----~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 233 GLNREGV----HLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred CCCCCCc----ccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 4321100 01123457888886 567999999988754
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=248.53 Aligned_cols=230 Identities=16% Similarity=0.223 Sum_probs=154.5
Q ss_pred HHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---Cc-------
Q 002955 584 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GL------- 653 (863)
Q Consensus 584 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l------- 653 (863)
.+.| +.++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3444 45689999999999999 6788999999999998 89999999999999999998887652 12
Q ss_pred eEEccCcEEEEeC-CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccceeE-ee--cc-------
Q 002955 654 GIAAEHGYFVRPN-YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESALV-WN--FQ------- 714 (863)
Q Consensus 654 ~liaenGa~I~~~-~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~--y~------- 714 (863)
++|+.||+.|+.. +...+...++. +.+.++++...+. .++.|......... .+ +.
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~~------e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLDQ------EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCCH------HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 3456789999853 33345444332 3333343332211 11111110000000 00 00
Q ss_pred ----cC-C-CCc------ch--hhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceE
Q 002955 715 ----YA-D-PDF------GS--CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780 (863)
Q Consensus 715 ----~~-d-~~~------~~--~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~v 780 (863)
+. . ... .. ....++.+.+.+.+.+....+.++..++||+|+|+|||.|+++|++++ |+++++|
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 00 0 000 00 011223334444444333455677889999999999999999999999 9999999
Q ss_pred EEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceec--CCHhHHHHHHHHHH
Q 002955 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTAEILRMLLGLA 841 (863)
Q Consensus 781 laiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 841 (863)
+||||+.||++||+.+|.+ |+||+. +..|+|++ ++.++|.++|++++
T Consensus 527 iAFGDs~NDIeMLe~AG~g--------------VAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLASLG--------------VALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCCCE--------------EEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999974 555553 67899987 46788999998864
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-24 Score=238.51 Aligned_cols=301 Identities=16% Similarity=0.162 Sum_probs=207.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH
Q 002955 175 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL 254 (863)
Q Consensus 175 ~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll 254 (863)
...+..|...++.++.++....++ |+||+||++.+.++...+. .++|+.+++|.++.... .+ ....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHHH
Confidence 446788888888887764444444 9999999998877766653 36789999999885431 11 1122334445
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-- 332 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 332 (863)
.+|.+.+.+.++++.+ +..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 6787776653322111 0112 22 79999997532111 11122334455555
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|..... .++..++.+ ++.++.+ . ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~---~~~~~~~----~--~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYE---EVLEYAE----G--DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHH---HHHHHhC----C--CC
Confidence 478899999999999999999999999988888876 8888864321 122222222 2222221 1 11
Q ss_pred cEEEEcCC-CCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC
Q 002955 412 PVVLIDTP-LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS 490 (863)
Q Consensus 412 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~ 490 (863)
.|.++... ++.+++.++|++||+|++||.+||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 35555433 48999999999999999999999999999999999 56799999999888773
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 491 ---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 491 ---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
.|++++ +.+++|++|.++++++ ++++...++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377776 4678999999999864 45555566677766 468999999998877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=222.32 Aligned_cols=216 Identities=19% Similarity=0.322 Sum_probs=153.9
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc-eeEE
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG-VDWE 672 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~-~~w~ 672 (863)
|++|+||||++ .+..++++++++|++| +++|+.|+++|||+...+.+++..++ ..++|+.||+++....+ ..+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6778999999999998 77899999999999999999998774 46899999999944433 3444
Q ss_pred eecCCCCccHHHHHHHHHHHHhhcC--------CCceeeecc--c--------eeEee-cc--c--CCCC-------cch
Q 002955 673 TCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKE--S--------ALVWN-FQ--Y--ADPD-------FGS 722 (863)
Q Consensus 673 ~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~--~--------~l~~~-y~--~--~d~~-------~~~ 722 (863)
..++ .+.+..+++...+.. ...++.... . ...+. .. . .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4332 233334443333221 111111110 0 00000 00 0 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCC
Q 002955 723 CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 802 (863)
Q Consensus 723 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 802 (863)
.+...+.+.+.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 345566777777776654677789999999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHH
Q 002955 803 PSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRML 837 (863)
Q Consensus 803 ~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L 837 (863)
+++||+. +..|+|++.+ .++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 5667764 5889998753 37787765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=226.95 Aligned_cols=222 Identities=20% Similarity=0.278 Sum_probs=148.5
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-C
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~ 667 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.+..+. ..++|+.||+.|+.. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4589999999999998 6788999999999998 88999999999999999999888773 346899999999863 3
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcC--------CCceeeeccc----eeEe----------ecccCCC------
Q 002955 668 GV-DWETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKES----ALVW----------NFQYADP------ 718 (863)
Q Consensus 668 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~----~l~~----------~y~~~d~------ 718 (863)
+. .+...++. +.+..+++...+.. .+.+...... ...| .+...+.
T Consensus 77 ~~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
T PRK10530 77 KKVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAAR 150 (272)
T ss_pred CEEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHh
Confidence 33 33333321 23333333322210 0111110000 0000 0000000
Q ss_pred --C--cc-------hhhHHHHHHHHHHHhcCCCe-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC
Q 002955 719 --D--FG-------SCQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD 786 (863)
Q Consensus 719 --~--~~-------~~~a~el~~~L~~~l~~~~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~ 786 (863)
. +. .....++.+.+.+. ..+ .+.++..++||.|++++||.|++++++++ |++++++++|||+
T Consensus 151 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~ 224 (272)
T PRK10530 151 QVNAIWKFALTHEDLPQLQHFAKHVEHE---LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDN 224 (272)
T ss_pred hcCCcEEEEEecCCHHHHHHHHHHHhhh---cCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCC
Confidence 0 00 00112222222222 222 33455678999999999999999999999 9999999999999
Q ss_pred cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 787 RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 787 ~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
.||++||+.+|.+ |+||+. +..|+|++. +.++|.++|+++.
T Consensus 225 ~NDi~m~~~ag~~--------------vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 225 FNDISMLEAAGLG--------------VAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhhHHHHHhcCce--------------EEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999999964 555553 467899874 5788999998864
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=220.62 Aligned_cols=195 Identities=26% Similarity=0.326 Sum_probs=149.1
Q ss_pred eeEecCCccccCCCCCC-CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEE
Q 002955 594 AILLDYDGTIMVPGSIS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 672 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~ 672 (863)
+|++|+||||++ .+ ..+++++.++|++| ++.|+.|+++|||+...+.+++..+ +.+++++||++|+.++...|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 68999999999999 6677999999999999999999874 588999999999987776666
Q ss_pred eecCCCC-ccHH---HHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcC-CCeEEE-EC
Q 002955 673 TCVSVPD-FSWK---QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN-EPVSVK-SG 746 (863)
Q Consensus 673 ~~~~~~~-~~w~---~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~-~~~~v~-~g 746 (863)
. .... ..|. +.+..++..+.+..++..++.+...+.++|... ........++.+.++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1122 122233444445566777788888889988764 11112233444555444221 346666 79
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 747 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 747 ~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
..++||+|++++||.+++++++++ |++++++++|||+.||++||+.++.++
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 999999999999999999999999 999999999999999999999999764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-22 Score=239.05 Aligned_cols=318 Identities=14% Similarity=0.139 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEeCC-----CCChhHhhc-CCC-
Q 002955 179 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYRT-LPI- 245 (863)
Q Consensus 179 ~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~r~-lp~- 245 (863)
..|.-+.+..++-+... .+| |+|++||||..++|.++.+. +.++++.|++|-- ||...+..+ +|+
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 34444444444444332 355 99999999999986555442 4568999999953 232111111 221
Q ss_pred --------------hHHHH-HHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCch
Q 002955 246 --------------RDELL-RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIG 310 (863)
Q Consensus 246 --------------r~eil-~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~ 310 (863)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTD 737 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehh
Confidence 11122 4677789888888888887654 11011110 1233456778899999999
Q ss_pred HHHhhcCC-----------chHHHHHHHHHHHhC------CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEE
Q 002955 311 QLQSVLNL-----------PETEAKVAELQDQFK------GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~~l~~~~~------~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 373 (863)
.|.+.... .........+++++. +.++|++|||+++.||+..++.|+.++++ ++. .|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv----qL 811 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG----QF 811 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----EE
Confidence 88643210 001122455777772 35899999999999999999999998875 333 48
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeee
Q 002955 374 VQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYII 453 (863)
Q Consensus 374 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a 453 (863)
|++|. |++ ..+++++.+++.+.+. ..-+.+.+.++..+...+|++||+||+||.+|||||+++|||+
T Consensus 812 VIvGd-----Gp~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMA 878 (977)
T PLN02939 812 VLLGS-----SPV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878 (977)
T ss_pred EEEeC-----CCc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHH
Confidence 88873 222 2345566666665521 1223445667777788999999999999999999999999999
Q ss_pred eecCCcccccccCCCCCCCCCccEEecccccCcccCC------------CceEeCCCCHHHHHHHHHHHhCC---CHHHH
Q 002955 454 CRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALGV---SDAEK 518 (863)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m---~~~er 518 (863)
| |.|+|++..+|..+.+. +|++++|.|+++++++|.+++.. .++.+
T Consensus 879 y-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~ 939 (977)
T PLN02939 879 Y-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVW 939 (977)
T ss_pred C-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 9 56789999999887662 48999999999999999999862 23333
Q ss_pred HHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 002955 519 QMRHEKHYRYVSTHDVAYWARSFLQDLERAC 549 (863)
Q Consensus 519 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 549 (863)
+...++. ....+++...++.+.+-..++.
T Consensus 940 ~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 940 KQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 3222222 2356899999998887666554
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-22 Score=227.66 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=197.4
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhC
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLG 279 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg 279 (863)
+|+|+||+.. -+-..++++.|++++.+.+|..|. .+.+ + .++.|-+.+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~----------~---~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELL----------D---KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHh----------c---cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 445677888999999999997762 1121 1 3566666554 34444321 00
Q ss_pred ceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCHHHHHHH
Q 002955 280 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLA 356 (863)
Q Consensus 280 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A 356 (863)
...++.++|+|||...|... . ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 11235779999998877531 1 11233444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccee
Q 002955 357 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 436 (863)
Q Consensus 357 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 436 (863)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+. .+ .+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9988865432222334566667666665531 23 5677899999999999999999
Q ss_pred eccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 002955 437 VTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI-RVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 437 vtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL 511 (863)
+||. .||||++++|||+| |.|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 59999999999999 56799999988887773 365 678999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 512 GVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 512 ~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
++++. +...++.++++ ..+++...++++++.|+.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 34455566554 668999999998888765
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-22 Score=239.97 Aligned_cols=308 Identities=14% Similarity=0.132 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEeCCCCChhHhhcCCChHHHHH
Q 002955 178 WQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYRTLPIRDELLR 251 (863)
Q Consensus 178 w~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~r~lp~r~eil~ 251 (863)
..-|..+++..++.+... .+| |+|++||+|-.++|.++++. +.++++.+++|-.- |. +..+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHH
Confidence 444555555555544332 345 99999999999999999875 35689999999431 11 122446
Q ss_pred HHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcC--Cc-----h----
Q 002955 252 ALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN--LP-----E---- 320 (863)
Q Consensus 252 ~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~--~~-----~---- 320 (863)
++..||.|---++.|++..+.. +. + ..+..++.++|+|||++.|.+... .| +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 7788999988888888766531 00 0 112346778999999988754211 00 0
Q ss_pred -HHHHHHHHHHHhC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHH
Q 002955 321 -TEAKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETH 395 (863)
Q Consensus 321 -~~~~~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~ 395 (863)
.......+++++. +.++|++|+||++.||+..++.|+.+++++ + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 1123445677762 568999999999999999999999999863 3 33777773 333 34567777
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCc
Q 002955 396 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 475 (863)
Q Consensus 396 ~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 475 (863)
+++.+++..+.. .|.+ .+..+......+|++||+||+||..|||||+.+|||+| +.
T Consensus 889 ~La~~Lg~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------Gt 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------GS 944 (1036)
T ss_pred HHHHHhCccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------CC
Confidence 777777543321 2333 33444444458999999999999999999999999999 56
Q ss_pred cEEecccccCcccC-C---------------CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHH
Q 002955 476 MLVVSEFVGCSPSL-S---------------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWA 538 (863)
Q Consensus 476 ~lVlSe~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~ 538 (863)
|+|++..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..+++..-+
T Consensus 945 ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 945 IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 78999999999887 2 389999999999999999999864332222233333433 458888888
Q ss_pred HHHHHHHHHHH
Q 002955 539 RSFLQDLERAC 549 (863)
Q Consensus 539 ~~~l~~l~~~~ 549 (863)
+.+++-.+++.
T Consensus 1025 ~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1025 LDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHh
Confidence 88887666543
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=232.34 Aligned_cols=293 Identities=20% Similarity=0.218 Sum_probs=193.9
Q ss_pred CEEEEeCcccchHHHHHHhhC----CCCeEEEEEeCCCC----ChhHhhcC--CC-------------hHHHHHHHHhCC
Q 002955 201 DFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFP----SSEIYRTL--PI-------------RDELLRALLNAD 257 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~~r~l--p~-------------r~eil~~ll~~d 257 (863)
|+|++||||-.++|.++++++ .++++.++.|..-. ..+.+..+ |. ..-+..++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 10 011223455666
Q ss_pred EecccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCchHHHhhcCC-----------chHHHH
Q 002955 258 LIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIGQLQSVLNL-----------PETEAK 324 (863)
Q Consensus 258 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~ 324 (863)
.|---++.|++..+.. ..| . +++ +..+..++.++|+|||.+.|.+.... ......
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 6655555555433210 000 0 000 11234468899999999988642110 011123
Q ss_pred HHHHHHHhC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 002955 325 VAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRR 400 (863)
Q Consensus 325 ~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~ 400 (863)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++++
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 3 348877732 1 1244556666555
Q ss_pred HhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec
Q 002955 401 INKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480 (863)
Q Consensus 401 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS 480 (863)
.+. .+.++.+. +.+....+|+.||+||+||.+||||++.+|||+| +.|+|+|
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~~ 386 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIVR 386 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEEe
Confidence 421 14455544 5666779999999999999999999999999999 5679999
Q ss_pred ccccCcccC-C--------CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 481 EFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 481 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
..+|..+.+ + .|++|+|.|+++++++|.++++.. ++.++...++.. ...+++..-++++++-.+++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999877 3 389999999999999999998631 222222222222 25688888888877665554
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=230.65 Aligned_cols=314 Identities=17% Similarity=0.148 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh--Hhh------------c
Q 002955 178 WQAYVSVNKIFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYR------------T 242 (863)
Q Consensus 178 w~~Y~~vN~~fa~~i~~~~-~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~r------------~ 242 (863)
|.....+...+...+.+.. +| |+|++|+++-.++..++++.. ++|+.++.|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 34 999999988777777776655 6799999997532210 000 0
Q ss_pred CCChHH-HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEE-cCeEEEEEEeccccCchHHHhhcCCch
Q 002955 243 LPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEY-FGRTVSIKILPVGIHIGQLQSVLNLPE 320 (863)
Q Consensus 243 lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~-~gr~~~i~v~p~GId~~~~~~~~~~~~ 320 (863)
++.+-. -...+..+|.|...+...++.-+. .+ +-...++.++|+|||++.|.+....+.
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCcccc
Confidence 000100 012233455554444322211110 01 112346788999999999864322111
Q ss_pred HHHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHH----HHHHHH
Q 002955 321 TEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQ----EVQSET 394 (863)
Q Consensus 321 ~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~~~~~v 394 (863)
.......+++.. +++++|++|||+++.||+..+++||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111112222221 46789999999999999999999998643221111 2322 344211 111111 122233
Q ss_pred HHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----cceeecccccCCCccceeeeeeecCCcccccccCCCCC
Q 002955 395 HATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 470 (863)
Q Consensus 395 ~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~ 470 (863)
..+++++ +....+.+.|.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 307 ~~~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~---------------- 363 (439)
T TIGR02472 307 LLLIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC---------------- 363 (439)
T ss_pred HHHHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----------------
Confidence 3444443 233345677889999999999988 9999999999999999999999
Q ss_pred CCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 002955 471 TAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDL 545 (863)
Q Consensus 471 ~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 545 (863)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++.+ .+++...++.++++ ..+++..-++++++-|
T Consensus 364 ---G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ---GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 56799999999888873 489999999999999999999854 45555666666666 4588888888777654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=233.21 Aligned_cols=320 Identities=15% Similarity=0.152 Sum_probs=212.2
Q ss_pred hhHHHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhhC------CCCeEEEEEeCCC-----CChhHhhcC
Q 002955 176 SLWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYRTL 243 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r~l 243 (863)
+....|.-.++..++.+... ++| |+|++||||-.++|.+|+++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34566776777776666442 456 999999999999999998754 4789999999742 221111113
Q ss_pred CCh------------HHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchH
Q 002955 244 PIR------------DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQ 311 (863)
Q Consensus 244 p~r------------~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~ 311 (863)
|+. .-+-.++..||.|---++.|+++-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 112345677787776677777654320000001100 00113457788999999998
Q ss_pred HHhhcCCc-----------hHHHHHHHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 312 LQSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 312 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432100 0111233455555 2567999999999999999999999998753 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|. |+ ..+++++++++++.. + .| .+.+.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 342 vG~-----G~--~~~~~~l~~l~~~~~------~--~V-~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGS-----GD--KEYEKRFQDFAEEHP------E--QV-SVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeC-----CC--HHHHHHHHHHHHHCC------C--CE-EEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 884 22 124455666655431 1 13 3456788999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC-------CceEeCCCCHHHHHHHHHHHhCCC-HHHHHHHHHHHhh
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-------GAIRVNPWNIDAVAEAMDSALGVS-DAEKQMRHEKHYR 527 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~ 527 (863)
+.|+|++..+|+.+.+. .|++++|.|++++|++|.+++.+- ..++..++.+ ..
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~-~~ 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL-EA 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH-HH
Confidence 56789999999887762 489999999999999999987431 1122221111 11
Q ss_pred hhccCCHHHHHHHHHHHHHHH
Q 002955 528 YVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 528 ~v~~~~~~~W~~~~l~~l~~~ 548 (863)
....+++..-++++++-.+++
T Consensus 466 ~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887666554
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=217.05 Aligned_cols=217 Identities=20% Similarity=0.305 Sum_probs=145.0
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC-ceeE
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY-GVDW 671 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~-~~~w 671 (863)
+|++||||||++ .++.++++++++|++| ++.|+.|++||||+...+.+.+..+. ..++|+.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 6778999999999998 88899999999999999999988763 3479999999998764 3444
Q ss_pred EeecCCCCccHHHHHHHHHHHHhhcC--------CCceeeeccce-eEee----ccc---C-C-----CC-c-------c
Q 002955 672 ETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESA-LVWN----FQY---A-D-----PD-F-------G 721 (863)
Q Consensus 672 ~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~~-l~~~----y~~---~-d-----~~-~-------~ 721 (863)
...++. +.+..+++.+.+.. .+.++...... +... +.. . + .+ . .
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 444332 23333433332211 11121111000 0000 000 0 0 00 0 0
Q ss_pred hhhHHHHHHHHHH-HhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 722 SCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 722 ~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.....++.+.+.+ .+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~~- 226 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGYG- 226 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCce-
Confidence 1122233333332 222222345678889999999999999999999999 99999999999999999999999874
Q ss_pred CCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHH
Q 002955 801 AGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 801 ~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L 837 (863)
+++|+. +..|+|++. +.++|.++|
T Consensus 227 -------------~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 227 -------------VAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred -------------eEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 445543 467888874 456777653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=212.54 Aligned_cols=210 Identities=21% Similarity=0.205 Sum_probs=141.5
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc--eeE
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG--VDW 671 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~--~~w 671 (863)
|++|+||||++ .++.+++++.++|++| +++|+.|++||||+...+.+++..+. ..+++++||+.|...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 6778999999999998 89999999999999999998887774 56799999999988653 345
Q ss_pred EeecCCCCccHHHHHH-HHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEE
Q 002955 672 ETCVSVPDFSWKQIAE-PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIV 750 (863)
Q Consensus 672 ~~~~~~~~~~w~~~v~-~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 750 (863)
...+. ..|..... .....+.. ..-.+ . ............+ ...+.++++ .+.. .+.+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~----~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQY-P-RRASLVKMRYGID----VDTVREIIK----ELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hcccc-c-cccceEEEeecCC----HHHHHHHHH----hcCc-eEEEecCCcEE
Confidence 44322 22322111 11000000 00000 0 0000000000001 111222222 2221 13333566799
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cccccee
Q 002955 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYY 826 (863)
Q Consensus 751 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~ 826 (863)
||.|+++|||.+++++++++ |++++++++|||+.||++||+.+|.+ ++||+. +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~--------------vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGFG--------------VAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCce--------------EEcCChhHHHHHhcCee
Confidence 99999999999999999999 99999999999999999999999975 455543 5788998
Q ss_pred cC--CHhH----HHHHHHHH
Q 002955 827 LD--DTAE----ILRMLLGL 840 (863)
Q Consensus 827 l~--d~~e----V~~~L~~L 840 (863)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 74 5667 88888764
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=209.74 Aligned_cols=207 Identities=18% Similarity=0.226 Sum_probs=139.7
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~ 670 (863)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||+...+.+++..+. ..+++++||++|...+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 6788999999999999 88999999999999999999887774 3478999999999865432
Q ss_pred EEeecCCCCccHHH-HHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcE
Q 002955 671 WETCVSVPDFSWKQ-IAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 749 (863)
Q Consensus 671 w~~~~~~~~~~w~~-~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 749 (863)
... .. ...|.. .... ..+....-.. ........+.. .. ....++...+ ......+..+..+
T Consensus 77 ~~~--~~-~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~--~~-----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--NM-EEEWFLDEEKK--KRFPRDRLSN--EYPRASLVIMR--EG-----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--cc-cchhhHHHhhh--hhhhhhhccc--ccceeEEEEec--CC-----ccHHHHHHHH----HhCCeEEEecCce
Confidence 111 11 111111 0000 0010000000 00000011110 00 0112222233 2334455555678
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY 825 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y 825 (863)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.++.+ ++||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~~--------------vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGFK--------------VAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCCe--------------EEcCCccHHHHHhCCE
Confidence 999999999999999999999 99999999999999999999999975 445542 577899
Q ss_pred ecC--CHhHHHHHH
Q 002955 826 YLD--DTAEILRML 837 (863)
Q Consensus 826 ~l~--d~~eV~~~L 837 (863)
++. +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 874 556777653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=228.90 Aligned_cols=291 Identities=17% Similarity=0.209 Sum_probs=197.1
Q ss_pred CEEEEeCcccchHHHHHHhhCC--CCeEEEEEeCCCC----ChhHhhcCCChH--------------H-HHHHHHhCCEe
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFP----SSEIYRTLPIRD--------------E-LLRALLNADLI 259 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~~r~lp~r~--------------e-il~~ll~~dli 259 (863)
|+|++||+|..++|.++++... ++|+.++.|...+ +.+.+..++... . +..++..||.|
T Consensus 130 DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 130 DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRV 209 (473)
T ss_pred CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcC
Confidence 9999999999999999988765 3899999997642 122222221110 1 22345666766
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCchHHHhhcCCc-----------hHHHHHH
Q 002955 260 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIGQLQSVLNLP-----------ETEAKVA 326 (863)
Q Consensus 260 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~~~~~-----------~~~~~~~ 326 (863)
-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... .......
T Consensus 210 ~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 277 (473)
T TIGR02095 210 TTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKE 277 (473)
T ss_pred eecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHH
Confidence 66666665544321 0000 010 011345678899999999886421100 0112234
Q ss_pred HHHHHhC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 002955 327 ELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRI 401 (863)
Q Consensus 327 ~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 401 (863)
.+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|.. + .++++++.+++.+.
T Consensus 278 ~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g-----~--~~~~~~l~~~~~~~ 344 (473)
T TIGR02095 278 ALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG-----D--PELEEALRELAERY 344 (473)
T ss_pred HHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-----C--HHHHHHHHHHHHHC
Confidence 5666662 6789999999999999999999999987642 448888742 1 23455666665443
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc
Q 002955 402 NKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 481 (863)
Q Consensus 402 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe 481 (863)
+. .+.++ ...+.+++..+|+.||++|+||..||||++.+|||+| +.|+|+|.
T Consensus 345 ----~~----~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------------------G~pvI~s~ 396 (473)
T TIGR02095 345 ----PG----NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------------------GTVPIVRR 396 (473)
T ss_pred ----CC----cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-------------------CCCeEEcc
Confidence 21 13333 4567888899999999999999999999999999999 56799999
Q ss_pred cccCcccCC---------CceEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 482 FVGCSPSLS---------GAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 482 ~~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
.+|..+.+. .|++++|.|++++|++|.+++.+ .++.++...++.. ...+++...++++++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999998882 37999999999999999999873 2222222222221 246888888887776544
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=226.26 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=190.3
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEeCC-----CCChhHhhc--CCCh-------------HHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYRT--LPIR-------------DELLRALL 254 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~r~--lp~r-------------~eil~~ll 254 (863)
++| |+|++||||-.++|.+|+.+ ..++++.++.|.. ||. ..+.. +|.. .-+..++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 455 99999999999999999753 3467899999964 221 11111 1110 01233455
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC-------ch----HHH
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL-------PE----TEA 323 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~-------~~----~~~ 323 (863)
.||.|---++.|++...+.-. -.|++. .+..+..++.++|+|||.+.|.+.... .+ ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 566555445555443321000 000000 001134568889999999988643210 00 011
Q ss_pred HHHHHHHHhC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 002955 324 KVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 398 (863)
Q Consensus 324 ~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~ 398 (863)
..+.+++++. +..+|++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 2345666651 356888899999999999999999998753 3 34888874 22 23445555555
Q ss_pred HHHhhccCCCCcccEEEEcCCCCHHHHHHHH-HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccE
Q 002955 399 RRINKIFGRPGYQPVVLIDTPLQFYERIAYY-VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 477 (863)
Q Consensus 399 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 477 (863)
.+. + ..++++.|. .+++..+| +.||+||+||.+|||||+.+|||+| +.++
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 442 2 124455564 67888877 5699999999999999999999999 4568
Q ss_pred EecccccCcccC-C-----------CceEeCCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 478 VVSEFVGCSPSL-S-----------GAIRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 478 VlSe~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
|+|..+|..+.+ . .|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889998988866 2 4899999999999999998532 12233322222222 356888888888877
Q ss_pred HHHHHHH
Q 002955 544 DLERACR 550 (863)
Q Consensus 544 ~l~~~~~ 550 (863)
-.+++..
T Consensus 475 lY~~l~~ 481 (485)
T PRK14099 475 LYRSLVA 481 (485)
T ss_pred HHHHHHh
Confidence 6666543
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-21 Score=216.94 Aligned_cols=287 Identities=17% Similarity=0.183 Sum_probs=206.7
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhc---CCC--hHHHH--HHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT---LPI--RDELL--RALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~---lp~--r~eil--~~ll~~dligF~t~~~~~~Fl~ 272 (863)
.|+|++|++...+++.++++. .++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 399999987666666666554 468899999975432221111 111 11222 2345789999999888877664
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
. .+ ....++.++|+|||.+.|... + ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 11 122456789999999887532 1 11233444 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG-RDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
+..+++|++++++++|+. ++.|+++|.+. .++ +..+ ++++++++. +....+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~----~l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPD----ALIELAAEL-------GIADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHH----HHHHHHHHc-------CCCceEEECCCCCHHHHHHH
Confidence 999999999999998872 46689888643 223 2323 334444443 23334567789999999999
Q ss_pred HHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHH
Q 002955 429 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 505 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ 505 (863)
|+.||+|++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 99999999999999999999999999 56799999988887773 389999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
+|.++++.+ +.+....+..++.+..+++...++++++-+.++
T Consensus 361 ~i~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999754 444455555667777889999998888766653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-22 Score=212.93 Aligned_cols=220 Identities=17% Similarity=0.235 Sum_probs=145.8
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEEeCCce
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~~~~~~ 669 (863)
.+|++||||||+++...+...++++.++++++ .++|+.|++||||+...++++...++ .-.+|++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 88999999999999999999976541 223788999999876421
Q ss_pred ----eEEeecCCCCccHH-HHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCC---e
Q 002955 670 ----DWETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP---V 741 (863)
Q Consensus 670 ----~w~~~~~~~~~~w~-~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~---~ 741 (863)
.|.... ...|. +.+..+...|....+......+...+.+.+.. ..+.++++.+.+.+...+ .
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP-------EAAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech-------hhhhHHHHHHHHHHHhcCCCEE
Confidence 111100 01122 11222223332222222223333444443221 122234455555444322 3
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh-hhhcCCCCCCCCcceEEEEeCCCc
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI-KSAAAGPSLSPVAEVFACTVGQKP 820 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a-g~~~~~~~~~~~~~~~av~vG~~~ 820 (863)
.+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+ +. +++|++..
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~~--------------~va~~na~ 213 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSVR--------------GVIVSNAQ 213 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCCc--------------EEEECCCH
Confidence 45678899999999999999999999999 99999999999999999999984 44 45555531
Q ss_pred ----cc-------cceecC--CHhHHHHHHHHH
Q 002955 821 ----SK-------AKYYLD--DTAEILRMLLGL 840 (863)
Q Consensus 821 ----s~-------A~y~l~--d~~eV~~~L~~L 840 (863)
.. ..|+.+ ..+++++.|+++
T Consensus 214 ~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 214 EELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 225554 368888888765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=208.13 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=129.2
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CC-ceEEccCcEEEEe
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVRP 665 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~-l~liaenGa~I~~ 665 (863)
.|++|+|++||||||++ +++.++++++++|+++ +++|+.|+|||||+...+.+.++.. .. ..+|+.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 47789999999999999 7889999999999998 8899999999999999998888632 22 3578999999997
Q ss_pred CCceeEEeecCC-CCccHHHHHHHHHHHH-----hhcCCCceeeeccceeEeecc-cCC-----CCc----c-hhhHHHH
Q 002955 666 NYGVDWETCVSV-PDFSWKQIAEPVMKLY-----TETTDGSTIETKESALVWNFQ-YAD-----PDF----G-SCQAKEL 728 (863)
Q Consensus 666 ~~~~~w~~~~~~-~~~~w~~~v~~i~~~y-----~~~~~gs~ie~k~~~l~~~y~-~~d-----~~~----~-~~~a~el 728 (863)
.+...+...+.. .+.++...+....+.+ .....+.+.+.........+. ... ..+ . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 654444443221 1222222222222111 111123333322111111110 000 000 0 1122345
Q ss_pred HHHHHHHhcCCCeEEEE-CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhh
Q 002955 729 LDHLESVLANEPVSVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKS 798 (863)
Q Consensus 729 ~~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 798 (863)
.+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++|++||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55665555443334333 457999999999999999999986 489999999 9999999998754
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=220.43 Aligned_cols=302 Identities=16% Similarity=0.166 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCC--hhH-hh-cCCCh--------HH
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YR-TLPIR--------DE 248 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~r-~lp~r--------~e 248 (863)
...+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 334433333333344566 999999 5667777899999999998887744311 110 10 11111 11
Q ss_pred ---HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHH
Q 002955 249 ---LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKV 325 (863)
Q Consensus 249 ---il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~ 325 (863)
+...+-.||.+-..+......|.. ... .++.++|+|||.+.|.... .. .
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~---~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA---R 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh---h
Confidence 234566677776665543333221 011 3577899999998886321 11 1
Q ss_pred HHHHHHh---CCCeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 002955 326 AELQDQF---KGQIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRI 401 (863)
Q Consensus 326 ~~l~~~~---~~~~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 401 (863)
..++... .++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.+++
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 1111111 46789999998 9999999999999999999999877 88888532111110000001111222333
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc
Q 002955 402 NKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 481 (863)
Q Consensus 402 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe 481 (863)
+.+.+. +.+.+.|.++.+++.++|+.||++|+||..||+|++++||||| +.|+|+|.
T Consensus 275 ~~~~~~----~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~PVIas~ 331 (396)
T cd03818 275 GGRLDL----SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GCLVVGSD 331 (396)
T ss_pred hcccCc----ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CCCEEEcC
Confidence 322211 2345678999999999999999999999999999999999999 56799999
Q ss_pred cccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHH
Q 002955 482 FVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFL 542 (863)
Q Consensus 482 ~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 542 (863)
.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 988888873 489999999999999999999865 4555556667777766 77666666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=208.36 Aligned_cols=227 Identities=15% Similarity=0.073 Sum_probs=146.3
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee--
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD-- 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~-- 670 (863)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|+++|||+...+.+++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 4553444699999998 88899999999999999999998774 3579999999998765421
Q ss_pred ---EEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccc---------eeEee------cccCCCCcchhhHHHHHHHH
Q 002955 671 ---WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES---------ALVWN------FQYADPDFGSCQAKELLDHL 732 (863)
Q Consensus 671 ---w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~---------~l~~~------y~~~d~~~~~~~a~el~~~L 732 (863)
|... ...++ +.+..+++.+.+..+..+...... .+... .......+ .. ..+..+.+
T Consensus 77 ~~~~~~~---~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIA---LGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEE---cCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 2211 11122 444455544332211110000000 00000 00000000 00 12233444
Q ss_pred HHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCC--cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcc
Q 002955 733 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML--PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 810 (863)
Q Consensus 733 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~ 810 (863)
.+.+....+.+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.+++|+|+++...
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~ 227 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNV 227 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCcc
Confidence 44444444555556679999999999999999999999 999 9999999999999999999998765555432100
Q ss_pred eEEEEeCCCccc--cc-eec--CCHhHHHHHHHHH
Q 002955 811 VFACTVGQKPSK--AK-YYL--DDTAEILRMLLGL 840 (863)
Q Consensus 811 ~~av~vG~~~s~--A~-y~l--~d~~eV~~~L~~L 840 (863)
..+.. |. |++ ++.++|.+.|+++
T Consensus 228 -------~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 228 -------SLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred -------ccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 01232 44 766 4678999999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-21 Score=216.70 Aligned_cols=281 Identities=14% Similarity=0.134 Sum_probs=195.7
Q ss_pred hhcCCCCCEEEEeCcccchH-HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHH-HHhCCEecccCHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRA-LLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~-ll~~dligF~t~~~~~~Fl 271 (863)
+..+| |+|++|+++..+. ...+-.+..++|+.+..|..|+..+.... +...+.+- +-.+|.+.+.+....+++.
T Consensus 85 ~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 160 (398)
T cd03796 85 IRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTV 160 (398)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHH
Confidence 34466 9999999875443 34443444568999999987753322110 11122222 3457888777766554443
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHH
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 351 (863)
... + ....++.++|+|+|.+.|..... . ..+++++|+++||+.+.||+.
T Consensus 161 ~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~ 209 (398)
T cd03796 161 LRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGID 209 (398)
T ss_pred HHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHH
Confidence 210 1 12245678899999988753211 0 125678999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+..+.+++|+++ |+.+|. ++..+++ .+++++. +....+.+.|.++.+++.++|+.
T Consensus 210 ~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~-------~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 210 LLVGIIPEICKKHPNVR----FIIGGD-----GPKRILL----EEMREKY-------NLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred HHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHH----HHHHHHh-------CCCCeEEEeCCCCHHHHHHHHHh
Confidence 99999999988888876 888873 3333333 3343333 22233455688999999999999
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CC-ceEeCCCCHHHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG-AIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~-al~VnP~d~~~~A~ai~~ 509 (863)
||++|+||..||||++++|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++|.+
T Consensus 270 ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~ 329 (398)
T cd03796 270 GHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEE 329 (398)
T ss_pred CCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHH
Confidence 99999999999999999999999 5679999999988877 33 445554 99999999999
Q ss_pred HhCCCHHHHHHHHHHHhh-hhccCCHHHHHHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYR-YVSTHDVAYWARSFLQDLERACR 550 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 550 (863)
++.++.+.+.. .++.++ ....+++..-++++++..+++..
T Consensus 330 ~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 330 AISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99876544333 334444 44568999999999888877654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-21 Score=207.14 Aligned_cols=235 Identities=14% Similarity=0.101 Sum_probs=150.0
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~ 668 (863)
+++|+|++|+||||++ .++.+++.+.++|++| ++.|+.|++||||+...+...+..+. ..++++.||++|+.++.
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 5689999999999998 5677889999999998 88999999999999999999888763 34689999999987543
Q ss_pred e-------------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce--eeec---c----ceeEe---e-ccc--CCCCc
Q 002955 669 V-------------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST--IETK---E----SALVW---N-FQY--ADPDF 720 (863)
Q Consensus 669 ~-------------~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~--ie~k---~----~~l~~---~-y~~--~d~~~ 720 (863)
. .|..... .+ .+.+.++++.+.......+ +... + ..+.. . ... ....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 1221111 11 2333333332222100000 0000 0 00000 0 000 00000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhh
Q 002955 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......+..+.+...+...++.+..++.++||.|.+ +||.|++++++++ |+++ +++++|||+.||++||+.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~~ 229 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADIA 229 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCee
Confidence 000012233444444444456666677899999999 9999999999999 9999 9999999999999999999987
Q ss_pred cCCCCCCCCcceEEEEeCCCcccc-ceec----CCHhHHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQKPSKA-KYYL----DDTAEILRMLLGLAE 842 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~~s~A-~y~l----~d~~eV~~~L~~L~~ 842 (863)
++|.|+++..+ -.....| +++. ++.++|.+.|+++..
T Consensus 230 vam~NA~~~~k------~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 230 VVVPGPDGPNP------PLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred EEeCCCCCCCc------ccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 55554433211 0001333 4544 357899999998753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=215.70 Aligned_cols=275 Identities=16% Similarity=0.107 Sum_probs=197.0
Q ss_pred CCEEEEeCcccchHHHHHHhh-CCCCeEEEEEeCCCCC-hhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhh
Q 002955 200 DDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPS-SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRM 277 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~ 277 (863)
-|+|+.|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+-+-.+|.|-..+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 399999988877777778763 2245677888954211 11110 11122333345688877666543333321
Q ss_pred hCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHH
Q 002955 278 LGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAM 357 (863)
Q Consensus 278 lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~ 357 (863)
+|. ...++.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1235677999999988852110 0113456799999999999999999999
Q ss_pred HHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceee
Q 002955 358 EQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLV 437 (863)
Q Consensus 358 ~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 437 (863)
.++.+++|+++ |+.+|. |+.. +++++++++. +....+.+.|.++.+|+..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG~-----G~~~----~~l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILGI-----GPWE----RRLRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEEC-----chhH----HHHHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 888883 3433 3344444443 23346678899999999999999999999
Q ss_pred cccc------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHH
Q 002955 438 TAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMD 508 (863)
Q Consensus 438 tS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~ 508 (863)
||.. |||+++.+|||+| +.|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 9999999999999 56799999999888873 489999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 509 SALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 509 ~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
+++++++++++...++.++++ ..+++...++++.+-+++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999966677777777777777 458888888888776553
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-21 Score=202.61 Aligned_cols=213 Identities=16% Similarity=0.194 Sum_probs=144.2
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEEeCCcee
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~~~~~~~ 670 (863)
+|++||||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..+. ...+|++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 689999999998 567777766 7776 5 78899999999999999999998762 234899999998764321
Q ss_pred EEeecCCCCccHHHHH------HHHHHHHhhcCCCceeeeccc--eeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 671 WETCVSVPDFSWKQIA------EPVMKLYTETTDGSTIETKES--ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 671 w~~~~~~~~~~w~~~v------~~i~~~y~~~~~gs~ie~k~~--~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
..+..|.... ..+ ..+....++..++.+.. ...+++... ++.. ....++.+.+++. ......
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~ 143 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKV 143 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEE
Confidence 0111121111 112 22333345555544432 234455432 2211 1223344444432 111123
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||+.
T Consensus 144 ~~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~ 206 (236)
T TIGR02471 144 ILSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPE 206 (236)
T ss_pred EEECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHH
Confidence 4567789999999999999999999999 9999999999999999999999876 4556653
Q ss_pred -ccccc----eecC--CHhHHHHHHHHH
Q 002955 820 -PSKAK----YYLD--DTAEILRMLLGL 840 (863)
Q Consensus 820 -~s~A~----y~l~--d~~eV~~~L~~L 840 (863)
+..|+ |+++ +.++|.+.|+.+
T Consensus 207 ~k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 207 LEGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6664 467899998764
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=217.48 Aligned_cols=284 Identities=16% Similarity=0.192 Sum_probs=197.0
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChH----HHHHHH-HhCCEecccCHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRD----ELLRAL-LNADLIGFHTFDYA 267 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~----eil~~l-l~~dligF~t~~~~ 267 (863)
++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|..-.....++.. .+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344566 99999987766666655444457889999997665431111111110 111222 24788877776665
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh----CCCeEEEeecC
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF----KGQIVMLGVDD 343 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~Vdr 343 (863)
+.+... +. ....++.++|+|||.+.|...... ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 555431 10 112356789999999888532111 1223333 36789999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002955 344 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 423 (863)
Q Consensus 344 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~ 423 (863)
+.+.||+..+++|++++ |+++ |+++| +|+..++ ++++++.. +| .+.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~~----l~~~~~~~----------~V-~f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYREE----LEKMFAGT----------PT-VFTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHHH----HHHHhccC----------Ce-EEeccCCHH
Confidence 99999999999888654 6554 88887 3443333 33333211 23 566899999
Q ss_pred HHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC------CceEeCC
Q 002955 424 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------GAIRVNP 497 (863)
Q Consensus 424 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~------~al~VnP 497 (863)
|+..+|+.||+||+||..||||++++|||+| |.|+|+|..+|+.+.+. +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 9999999999999999999999999999999 56799999999887763 2899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH-HHHHHHhh
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD-LERACRDH 552 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 552 (863)
.|++++|++|.++++. ++.++...++.++++.++++...++++++. -.++...+
T Consensus 385 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLAD-PELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 455555666677788889999999999874 45554443
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-21 Score=199.53 Aligned_cols=197 Identities=18% Similarity=0.114 Sum_probs=125.6
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-C-ceEEccCcEEEEeCCce-e
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G-LGIAAEHGYFVRPNYGV-D 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~-l~liaenGa~I~~~~~~-~ 670 (863)
+|++|+||||++ .++.+++.++++|++| +++|+.|++||||+...+..++..+. . .++|++||+.|+..... .
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 5555666699999998 88999999999999999999998763 3 56999999999874321 1
Q ss_pred E---EeecCCCCccHHHHHHHHHHHHhhcCCCc-eeeec--------cceeEee------cccCCCCcchhhHHHHHHHH
Q 002955 671 W---ETCVSVPDFSWKQIAEPVMKLYTETTDGS-TIETK--------ESALVWN------FQYADPDFGSCQAKELLDHL 732 (863)
Q Consensus 671 w---~~~~~~~~~~w~~~v~~i~~~y~~~~~gs-~ie~k--------~~~l~~~------y~~~d~~~~~~~a~el~~~L 732 (863)
+ .... ....+ +.+.++++...+..... +.... ...+... .......+......+..+.+
T Consensus 77 ~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRII--LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEe--cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 1110 11122 22333333221110000 00000 0000000 00000000000011223333
Q ss_pred HHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 733 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 733 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.+.+....+.+..+..++||.|++++||.|++++++++ |+++++|++|||+.||++||+.+|.++
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 34444334555567789999999999999999999999 999999999999999999999999853
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=216.91 Aligned_cols=310 Identities=18% Similarity=0.214 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhhC-----CCCeEEEEEeCCCCCh----hHhhcC--CC-
Q 002955 179 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYRTL--PI- 245 (863)
Q Consensus 179 ~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~r~l--p~- 245 (863)
..|...++...+.+... .+| |+|++||+|-.++|.++++.+ .++|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444444444444332 344 999999999999999998874 5789999999875321 111111 11
Q ss_pred -------------hHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCch
Q 002955 246 -------------RDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIG 310 (863)
Q Consensus 246 -------------r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~ 310 (863)
..-+..++..||.|-.-+..|++..++.- .|. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 01223445666766666666655443210 000 010 112335788899999999
Q ss_pred HHHhhcCCc-----------hHHHHHHHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 311 QLQSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 311 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.+++ +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 1122334566665 46789999999999999999999999987653 4478
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
.+|.. + .++.+++.+++.+.. ..++++.+ .+.++...+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 234455555544431 13555554 45777789999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccC-C--------CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHE 523 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~ 523 (863)
+.|+|+|..+|..+.+ + +|+++.|.|+++++++|.+++++. ++++....+
T Consensus 394 -------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 -------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred -------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 5679999999999888 3 599999999999999999998643 222222222
Q ss_pred HHhhhhccCCHHHHHHHHHHHH
Q 002955 524 KHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 524 ~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+..+ ..+++..-++++++-.
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 2222 3467777777766543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-20 Score=206.06 Aligned_cols=284 Identities=21% Similarity=0.198 Sum_probs=199.2
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-----C-ChHH-HHHHHHhCCEecccCHHHHHHHHHH
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-----P-IRDE-LLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-----p-~r~e-il~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
|+|.+|++....++..+.+.. ++++.+..|...+........ + .+.. ....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARRL-GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhhc-CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 999999988777777776554 688999999765322111000 0 0111 1234557899988887766655431
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|+|...+...... ....+++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 00 112236789999998877532211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+-+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHHHhCC
Confidence 999999988887766 888885432221 22223344444443 2223456778999999999999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 510 (863)
++++||..||||++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999 56799999999888872 48999999999999999999
Q ss_pred hCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 511 LGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 511 L~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
++.+ ++++...++.++++ ..+++..++++++
T Consensus 366 ~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTDP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9764 44555555666666 7788888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=204.65 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=198.2
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh-----cCCChHH-HHHHHHhCCEecccCHHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR-----TLPIRDE-LLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----~lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
.|+|++|++...+.+.+++ +..++|+.+.+|..+|...... ....... ....+-.+|.|-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4999999988766555544 4557899999998765321100 0000111 1233456788877777666555431
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 350 (863)
. -+ -...++.++|+|+|...+... . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112456789999998877521 1 12233443 457799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++. ++++ |+.+|.. ++..++.+++.+.+...+.. ...|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRN-----RTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccc-----cCceEEecCCCCHHHHHHHHH
Confidence 99999998873 3433 6666532 22234455555555554321 123677888999999999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCH------H
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI------D 501 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~------~ 501 (863)
.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 56799999999888773 4899999998 9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERA 548 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 548 (863)
+++++|.++++. +++++...++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999875 444455555556555 5689999999988776653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=214.28 Aligned_cols=330 Identities=13% Similarity=0.172 Sum_probs=203.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeC-----------CCCChh-Hhhc
Q 002955 175 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS-----------PFPSSE-IYRT 242 (863)
Q Consensus 175 ~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~-----------PfP~~e-~~r~ 242 (863)
.+.|..-.+++...++.+........|+|+-|.+.=-++...|++++ +++..++.|. .|...| -|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777777654443113999999666667888888776 6999999993 222111 1221
Q ss_pred C-CChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceeccc---------CceeeEEEcCeEEEEEEeccccCchHH
Q 002955 243 L-PIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK---------RGYIGLEYFGRTVSIKILPVGIHIGQL 312 (863)
Q Consensus 243 l-p~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~---------~~~~~~~~~gr~~~i~v~p~GId~~~~ 312 (863)
. -...|.+ .|-.||.|--.|+.-....-. ++ + .|.+- +-..+++++. -++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 1 1111222 455677665444322210000 00 0 01000 0000122111 277889999999988
Q ss_pred HhhcCCchHHHHH--------------HHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEE
Q 002955 313 QSVLNLPETEAKV--------------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 313 ~~~~~~~~~~~~~--------------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 373 (863)
.+... ...+. ...++.+ .++++|++|+|+++.||+..+++||.++.+..+++ .|
T Consensus 535 ~P~~~---~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~L 607 (815)
T PLN00142 535 FPYTE---KQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NL 607 (815)
T ss_pred CCCCh---HHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EE
Confidence 63211 00100 0011111 35679999999999999999999999886665554 48
Q ss_pred EEEecCCC-CCchhHHH--HHHHHHHHHHHHhhccCCCCcccEEEEc---CCCCHHHHHHHHH-hccceeecccccCCCc
Q 002955 374 VQIANPAR-GRGRDVQE--VQSETHATVRRINKIFGRPGYQPVVLID---TPLQFYERIAYYV-IAECCLVTAVRDGMNL 446 (863)
Q Consensus 374 vqi~~p~r-~~~~~~~~--~~~~v~~l~~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~EGmnL 446 (863)
++||.+.. ...++.++ ..+++.+++++. +..+ .|.++. +..+..+++.+|+ ++|+||+||.+||||+
T Consensus 608 VIVGgg~d~~~s~d~ee~~el~~L~~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 608 VVVGGFIDPSKSKDREEIAEIKKMHSLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEEECCccccccccHHHHHHHHHHHHHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 88885411 11111111 123344455544 2222 244432 2456678888877 5799999999999999
Q ss_pred cceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhC---CCHHHHHH
Q 002955 447 IPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQM 520 (863)
Q Consensus 447 v~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~ 520 (863)
|++||||| |.|+|+|..+|..+.+. .|++|+|.|++++|++|.+++. ..++.++.
T Consensus 682 vvLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999 56799999999998883 4899999999999999987653 24445555
Q ss_pred HHHHHhhhh-ccCCHHHHHHHHHHHH
Q 002955 521 RHEKHYRYV-STHDVAYWARSFLQDL 545 (863)
Q Consensus 521 r~~~~~~~v-~~~~~~~W~~~~l~~l 545 (863)
..++.++.+ +.+++...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555556666 5689888888877644
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=203.84 Aligned_cols=207 Identities=14% Similarity=0.165 Sum_probs=155.8
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.++.++|+|||.+.|..... . .....++.+ .++.+|+++||+++.||+..+++|+.++++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45677899999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|. |+..+++ ++.+++. +....+++.|. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~----~~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGAC----EQMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHH----HHHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 3332333 3333332 23345667664 578999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-cc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 531 (863)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.++++.+ +.+....++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHh
Confidence 56799999999888873 389999999999999999998754 44555556667776 56
Q ss_pred CCHHHHHHHHHHHHHH
Q 002955 532 HDVAYWARSFLQDLER 547 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~ 547 (863)
+++...++++.+-..+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888887765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-19 Score=211.25 Aligned_cols=339 Identities=12% Similarity=0.135 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCC----CChhHh-hcCC------
Q 002955 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIY-RTLP------ 244 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~-r~lp------ 244 (863)
+.|..-..++...++.+........|+|+.|.+.=-++...|+++. +++..+..|..= +.+..+ ..+.
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666666667766654443123999999877777888887776 588888888541 111100 0010
Q ss_pred Ch-HHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceec-ccCceeeEEEc--CeEEEEEEeccccCchHHHhhcCCch
Q 002955 245 IR-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQ-SKRGYIGLEYF--GRTVSIKILPVGIHIGQLQSVLNLPE 320 (863)
Q Consensus 245 ~r-~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~-~~~~~~~~~~~--gr~~~i~v~p~GId~~~~~~~~~~~~ 320 (863)
.+ ..=+..|-.||.|--.|+.-+..-...+.. .+.... ...+...+..+ ...-++.++|+|+|+..|.+......
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~ 519 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEK 519 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhh
Confidence 01 001255667898876665321110000000 000000 00011111110 11237788999999998864321110
Q ss_pred HH-HHH----------HHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC--
Q 002955 321 TE-AKV----------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG-- 382 (863)
Q Consensus 321 ~~-~~~----------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~-- 382 (863)
.. ... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 520 r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~ 595 (784)
T TIGR02470 520 RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKE 595 (784)
T ss_pred hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccccc
Confidence 00 000 1112332 467899999999999999999999987644333 3558888864321
Q ss_pred -CchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH----hccceeecccccCCCccceeeeeeecC
Q 002955 383 -RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV----IAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 383 -~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~----~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
...+..+..+++.+++++. |-.+ .|.++....+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 596 s~d~ee~~~i~~L~~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc--- 666 (784)
T TIGR02470 596 SKDREEQAEIEKMHNLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC--- 666 (784)
T ss_pred ccchhHHHHHHHHHHHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc---
Confidence 1111122334455555554 2222 2444332235556666665 247999999999999999999999
Q ss_pred CcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhhhh-c
Q 002955 458 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQMRHEKHYRYV-S 530 (863)
Q Consensus 458 ~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~ 530 (863)
|.|+|+|..+|..+.+. .|++|+|.|++++|++|.++++ ..++.++...++.++++ +
T Consensus 667 ----------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~ 730 (784)
T TIGR02470 667 ----------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYE 730 (784)
T ss_pred ----------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 67899999999999883 4899999999999999999873 23444444455556665 5
Q ss_pred cCCHHHHHHHHHHHH
Q 002955 531 THDVAYWARSFLQDL 545 (863)
Q Consensus 531 ~~~~~~W~~~~l~~l 545 (863)
.++|...++++++..
T Consensus 731 ~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 731 KYTWKIYSERLLTLA 745 (784)
T ss_pred hCCHHHHHHHHHHHH
Confidence 688888888877654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-19 Score=201.17 Aligned_cols=281 Identities=18% Similarity=0.226 Sum_probs=194.9
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH-HhCCEecccCHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARH 269 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l-l~~dligF~t~~~~~~ 269 (863)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+-. .-++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34556677 899999999888888887777777888888854332111 11111111 1134443344444444
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI 346 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~ 346 (863)
|+.. + .-...++.++|+|+|...|... ......+++++ .++.+++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4321 0 0112356778999998876421 11223445554 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++ .+.+.| ..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~----~~~~~~-------~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLER----LIKALG-------LSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHH----HHHhcC-------CCCcEEEecc--cccHH
Confidence 9999999999999999888776 888873 333333333 333322 2233444554 46899
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAE 505 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ 505 (863)
.+|+.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ ..|..++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 5679999998888877 4589999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+|.+++++++..+..+.++.......+++..+++++++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777776666555333446689999998887643
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=205.68 Aligned_cols=273 Identities=17% Similarity=0.143 Sum_probs=179.8
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-------------CChH--HHH----------
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-------------PIRD--ELL---------- 250 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-------------p~r~--eil---------- 250 (863)
.+| |+|..| +-+..+-.+.+.++++|+++++|-|.-+++.+..+ ..+. .++
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 755444 33333334556677899999999433244544221 1111 111
Q ss_pred ---HHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHH
Q 002955 251 ---RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAE 327 (863)
Q Consensus 251 ---~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~ 327 (863)
..+-.||.|-..+..-..++.+. .+...++.++|+|+|.+.|.... .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--------------------~~~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--------------------WKRNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--------------------hCcCCCcEEEcCCCCHHHhcccc---c-------
Confidence 12335677666665444444321 01112567789999998775221 0
Q ss_pred HHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccC
Q 002955 328 LQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFG 406 (863)
Q Consensus 328 l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g 406 (863)
....++.+|++++|+.+.||+...++||.++.+++|+.. .++.|+++|.... .+..+..+++++++++.+
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~---- 302 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELG---- 302 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhC----
Confidence 012456799999999999999999999999999887631 2466888885321 111234556666666552
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 407 RPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 407 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
....+.|.+.++.+++..+|+.||++|.||..||||++++||||| +.|+|+|..+|..
T Consensus 303 ---l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-------------------G~pvIa~~~ggp~ 360 (419)
T cd03806 303 ---LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-------------------GLIPLAHASGGPL 360 (419)
T ss_pred ---CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-------------------CCcEEEEcCCCCc
Confidence 223456677899999999999999999999999999999999999 5568888887765
Q ss_pred cc-CC------CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 487 PS-LS------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 487 ~~-l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
+. +. .|++++ |++++|++|.+++++++++++.+.+..++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 43 33 378874 9999999999999998776665444444444445543
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=200.00 Aligned_cols=274 Identities=19% Similarity=0.133 Sum_probs=190.6
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCC----CChhHhhcCCChHHHHH-HHHhCCEecccCHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYRTLPIRDELLR-ALLNADLIGFHTFDY 266 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~r~lp~r~eil~-~ll~~dligF~t~~~ 266 (863)
+++..+| |+|++|+.+..+....+.++ .++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4556677 89999977654444444333 3688999888422 22111110001112222 234578888777655
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCccc
Q 002955 267 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 346 (863)
Q Consensus 267 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~ 346 (863)
.+.+... |. ...++.++|+|+|.+.+.... ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5444431 21 123566789999988775210 0134668999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|+..+.+++|+++ |+++|. ++. .+++.+++++. +..+.+.+.|.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~-------~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARAL-------GLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHc-------CCCCeEEECCCCCHHHHH
Confidence 9999999999999998888766 888873 332 23344444442 223345678899999999
Q ss_pred HHHHhccceeeccc------ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceEeCC
Q 002955 427 AYYVIAECCLVTAV------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNP 497 (863)
Q Consensus 427 aly~~ADv~vvtS~------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~VnP 497 (863)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 5679999999988877 24899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
.|+++++++|.++++.+ +.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999998754 44445555666666 4588888887764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.6e-20 Score=206.64 Aligned_cols=225 Identities=17% Similarity=0.185 Sum_probs=146.7
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHH-HHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEE
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAIL-DNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVR 664 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL-~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~ 664 (863)
.+.+.+|++||||||++.. .++.++.....++ +++ .++|+.++++|||+...+.++...++ +..+|+.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4557799999999999831 1446776666666 776 78899999999999888888766542 2236777999998
Q ss_pred eCCceeEEeecCCCCccHHHHHH---------HHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHH
Q 002955 665 PNYGVDWETCVSVPDFSWKQIAE---------PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESV 735 (863)
Q Consensus 665 ~~~~~~w~~~~~~~~~~w~~~v~---------~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~ 735 (863)
..+... .+..|...+. +.+..|.........+.+...+.+.+.. ..+.++.+.+.+.
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~-------~~~~~~~~~l~~~ 149 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDK-------KKAQEVIKELSER 149 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEech-------HHhHHHHHHHHHH
Confidence 754211 1223333222 1111121111111112222233332221 1233445556555
Q ss_pred hcCC--C-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh-hhcCCCCCCCCcce
Q 002955 736 LANE--P-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK-SAAAGPSLSPVAEV 811 (863)
Q Consensus 736 l~~~--~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag-~~~~~~~~~~~~~~ 811 (863)
+... . ..+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++ .+
T Consensus 150 ~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~g------------ 217 (413)
T PLN02382 150 LEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYG------------ 217 (413)
T ss_pred HHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCE------------
Confidence 5432 2 344678899999999999999999999998656899999999999999999999998 54
Q ss_pred EEEEeCCCc------------cccceec---CCHhHHHHHHHHHHHh
Q 002955 812 FACTVGQKP------------SKAKYYL---DDTAEILRMLLGLAEA 843 (863)
Q Consensus 812 ~av~vG~~~------------s~A~y~l---~d~~eV~~~L~~L~~~ 843 (863)
|+||+.. ..|++++ ++.+++.+.|+.+.-.
T Consensus 218 --vam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 218 --VMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred --EEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 4455431 2345553 2578999999988743
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=190.16 Aligned_cols=210 Identities=17% Similarity=0.163 Sum_probs=136.1
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-C-C-ceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-E-G-LGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~-~-l~liaenGa~I~~~~~ 668 (863)
++++++|+||||++ .++.+++++.++|++| ++. +.|++||||+...+.+.+... . . ..++++||+++...+.
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45677999999998 6788999999999999 655 999999999999998888653 1 1 3688999999987665
Q ss_pred eeEEeecCC-CCccHHHHHHHHHHHHhh--------cCCCceeeeccceeEee--cccCCCC---------cchhhHHHH
Q 002955 669 VDWETCVSV-PDFSWKQIAEPVMKLYTE--------TTDGSTIETKESALVWN--FQYADPD---------FGSCQAKEL 728 (863)
Q Consensus 669 ~~w~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~--y~~~d~~---------~~~~~a~el 728 (863)
..+...+.. .+. +.++++++...+ ...+.+++..+...... +.+.... .-.....++
T Consensus 82 ~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 158 (245)
T PLN02423 82 LIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKM 158 (245)
T ss_pred EEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHH
Confidence 544432211 111 222222221111 12244444332222111 1111000 001122344
Q ss_pred HHHHHHHhcCCC-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhcCCC
Q 002955 729 LDHLESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 729 ~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~ 803 (863)
.+.+.+.+.+.. ....+|..++||+|+|+|||.|++.|+ ++++|++||| +.||++||+.-|.
T Consensus 159 ~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~----- 225 (245)
T PLN02423 159 VSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT----- 225 (245)
T ss_pred HHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc-----
Confidence 455555554422 233445689999999999999999997 5799999999 8999999997554
Q ss_pred CCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHH
Q 002955 804 SLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 804 ~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
.+.+ +.+++++.++|+++.
T Consensus 226 --------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 --------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred --------ceEE-----------eCCHHHHHHHHHHhc
Confidence 1333 457888888888763
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-19 Score=207.32 Aligned_cols=276 Identities=17% Similarity=0.114 Sum_probs=188.8
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCCh---hHhhc---CCChHH--------HH-HHHHhCCEeccc
Q 002955 198 PDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT---LPIRDE--------LL-RALLNADLIGFH 262 (863)
Q Consensus 198 p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~---lp~r~e--------il-~~ll~~dligF~ 262 (863)
|+-|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.... +. ..+-.||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3459999998766666666655556899999999755421 22211 000001 10 112245555433
Q ss_pred CHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeec
Q 002955 263 TFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVD 342 (863)
Q Consensus 263 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vd 342 (863)
+.... ..+. .++....++.++|+|||.+.|..... . ....++.+|+++|
T Consensus 252 s~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEe
Confidence 33221 1111 11223346778999999988863211 0 1124678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002955 343 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 422 (863)
Q Consensus 343 rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~ 422 (863)
|+.+.||+..+++|+..+.++.|+++ |+.+|... +..++.+++++++++.+. ...+.+.| .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~l-------~~~V~f~G---~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLGL-------EDNVKFTG---F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhCC-------CCeEEEcC---C
Confidence 99999999999999999999888876 88887421 223456667777766632 22345555 6
Q ss_pred HHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--------Cce
Q 002955 423 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAI 493 (863)
Q Consensus 423 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--------~al 493 (863)
.++..+|+.||++|+||..|||+++++|||+| +.|+|+|..+|+.+.+ . .|+
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~PVVatd~g~~~elv~~~~~~~~g~~G~ 422 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIPVVATDVGSCRELIEGADDEALGPAGE 422 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCCEEECCCCChHHHhcCCcccccCCceE
Confidence 68999999999999999999999999999999 5679999999988877 3 489
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHH
Q 002955 494 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQ 543 (863)
Q Consensus 494 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 543 (863)
+++|.|++++|++|.++++.+ +.++...+..++++.+ +++...++++.+
T Consensus 423 lv~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 423 VVPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EECCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999854 4455555666666655 566666666554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.2e-19 Score=196.02 Aligned_cols=263 Identities=14% Similarity=0.110 Sum_probs=177.7
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-HHHHhCCEecccCHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-~~ll~~dligF~t~~~~~~F 270 (863)
+.+..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3444555 99999999877777777766655666778887765444332211110111 11233566555554433333
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccc
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIF 347 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~ 347 (863)
... ....++.++|+|+|...+... +..... ++++ .++.+|+++||+++.
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~----~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK----RRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH----HHHcCCCCCCEEEEEEeccccc
Confidence 210 112356789999999877532 111111 2222 567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
||+..+++|+..+.+++|+++ |+.+|. ++..+.+++.+ ++. +..+.+.+.|. .+++..
T Consensus 205 Kg~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~~ 262 (358)
T cd03812 205 KNHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKV----KEL-------GLEDKVIFLGV--RNDVPE 262 (358)
T ss_pred cChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHH----Hhc-------CCCCcEEEecc--cCCHHH
Confidence 999999999999999998876 888873 33333333333 222 22233445555 678999
Q ss_pred HHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHHHHHH
Q 002955 428 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAE 505 (863)
Q Consensus 428 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~~~A~ 505 (863)
+|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|+
T Consensus 263 ~~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~ 323 (358)
T cd03812 263 LLQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAE 323 (358)
T ss_pred HHHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHH
Confidence 999999999999999999999999999 57799999999888874 355555667899999
Q ss_pred HHHHHhCCCHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKH 525 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~ 525 (863)
+|.++++.++.+++.+..+.
T Consensus 324 ~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 324 EILKLKSEDRRERSSESIKK 343 (358)
T ss_pred HHHHHHhCcchhhhhhhhhh
Confidence 99999998876655543333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.6e-19 Score=196.13 Aligned_cols=269 Identities=17% Similarity=0.231 Sum_probs=188.8
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
++..+| |+|++|..+...+..+..+. .++++.+.+|-.++....+ ..+ +..+|.+-+.+....+.+..
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHHH
Confidence 344566 99999988766555554443 3789999999776543311 222 34588887766544443331
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
..+. ...++.++|+|+|...|......+ .....+++++ .++++++++||+...||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1121 223567789999998875332211 1122244544 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+..+.+++++++ |+.+|... ..+.+.+++.+.+.+. +..+-+.+.|. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988777665 88888432 2223444444444433 22222345555 67899999
Q ss_pred Hhccceeecc-cccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHH
Q 002955 430 VIAECCLVTA-VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 505 (863)
Q Consensus 430 ~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ 505 (863)
+.||++++|| ..||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 56799999888877772 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccC
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~ 532 (863)
+|..++...++++....++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888877788877777777777553
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=197.23 Aligned_cols=280 Identities=17% Similarity=0.135 Sum_probs=182.4
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHH---------HHHhCCEecccCHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLR---------ALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~---------~ll~~dligF~t~~~~~~F 270 (863)
.|+|.+|+..... + +++... ..++.|.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSACV-P-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchHH-H-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 4999998866432 2 333333 389999999 443321110011111111 1234677766555433333
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
... ++. .....+.++|+|+|.+.|......+ ..+......++.+|+++||+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 110 0111235789999998875321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 351 SLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRR-INKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 351 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~-IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
..+++|++++.++. |+++ |+.+|..... .++..++.+++.+++++ . +...-+.+.|.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~-------~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELL-------LLEDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhc-------CCCceEEEeCCCChHHHH
Confidence 99999999998887 6655 8888854311 12223445555555554 2 222345667899999999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~ 503 (863)
.+|+.||++++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++| |++++
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~ 354 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYA-------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEF 354 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHc-------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHH
Confidence 9999999999999999999999999999 56799999988887773 3788877 99999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARS 540 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 540 (863)
|++|.++++.++ .++...++.++++ ..+++..++++
T Consensus 355 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 355 AEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999998764 4444555566665 44777766654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-18 Score=193.14 Aligned_cols=286 Identities=15% Similarity=0.150 Sum_probs=192.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCC---CCeEEEEEeCCCCChhHhhcCCC-hHHHHHHHHhCCEec
Q 002955 185 NKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYRTLPI-RDELLRALLNADLIG 260 (863)
Q Consensus 185 N~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~r~lp~-r~eil~~ll~~dlig 260 (863)
++.+.+.+ +..+| |+|++|.+....++..+..+.. +.++.+.+|-.-.. ....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEE
Confidence 34444444 45566 8999998776556666554322 67888888843110 1111121 222334456789998
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeE
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIV 337 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~v 337 (863)
..+......+...+ +..-++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 88887666554311 111246789999998776421 11 1223333 46889
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002955 338 MLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 417 (863)
Q Consensus 338 il~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~ 417 (863)
+++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..++++ ++.+. + ..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~----~~~~~----~---~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAER----LAREL----G---LQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHH----HHHHc----C---CCceEEEe
Confidence 99999999999999999999988665 3344 777773 233333333 33332 1 22223444
Q ss_pred CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceE
Q 002955 418 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIR 494 (863)
Q Consensus 418 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~ 494 (863)
|.. +++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 543 57999999999999999999999999999999 56799999999888773 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHHH
Q 002955 495 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 495 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 546 (863)
++|.|++++|++|.++++.+ +++....++.+++ ...+++...++++++-++
T Consensus 318 ~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 318 VDVGDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred cCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999754 4444445556666 456888888888876554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-18 Score=197.71 Aligned_cols=314 Identities=13% Similarity=0.139 Sum_probs=204.0
Q ss_pred ccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCccc-chHHHHHHhhCCCCeEEE
Q 002955 150 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHL-MVLPTFLRKRFNRVKLGF 228 (863)
Q Consensus 150 f~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~ 228 (863)
+-....||-||.+. ..-+..|-++..+.+ +. |.|||----. ..+| ++| +.+.||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33556688877653 223567777776654 12 3488742111 1222 344 33789999
Q ss_pred EEeCCCCChhHhhcCCCh-------------------HH----H---HH--HHHhCCEecccCHHHHHHHHHHHHhhhCc
Q 002955 229 FLHSPFPSSEIYRTLPIR-------------------DE----L---LR--ALLNADLIGFHTFDYARHFLSCCSRMLGV 280 (863)
Q Consensus 229 flH~PfP~~e~~r~lp~r-------------------~e----i---l~--~ll~~dligF~t~~~~~~Fl~~~~r~lg~ 280 (863)
.+|-|--+.+....+-.+ +. + +. .+-.+|.|-..+....+++.+. .
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----W-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----c--
Confidence 999665455433221000 00 0 00 1134566665554444444321 1
Q ss_pred eecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHH
Q 002955 281 SYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360 (863)
Q Consensus 281 ~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~l 360 (863)
+...++.++++|+|...+... +. ....++.++++|+|+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245678889998766311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeeccc
Q 002955 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV 440 (863)
Q Consensus 361 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 440 (863)
+++.++-..++.|+++|... .++..++.+++++++++.+ ....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599888542 1222334455555555442 2223456688999999999999999999999
Q ss_pred ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C------CceEeCCCCHHHHHHHHHHHhCC
Q 002955 441 RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S------GAIRVNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 441 ~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~------~al~VnP~d~~~~A~ai~~aL~m 513 (863)
.||||++++|||+| +.|+|++..+|..+.+ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~-------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAA-------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHc-------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 99999999999999 5678999988865333 2 267764 999999999999998
Q ss_pred CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 002955 514 SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 549 (863)
Q Consensus 514 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 549 (863)
++++++...++.++.+.+++....++++.+.+....
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 877777777777888888999988888887776543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-19 Score=205.65 Aligned_cols=203 Identities=15% Similarity=0.090 Sum_probs=134.0
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY 667 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~ 667 (863)
.+++|+|++|+||||++ .++.++++++++|+++ +++|+.|++||||+...+..++..+. ..++|++||+.|+.+.
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46789999999999999 5667778999999998 88999999999999999999987763 3579999999999865
Q ss_pred ce------------eEEeecCCCCccHHHHHHHHHHHHhhcC----------CCceeeeccceeEee----cc-------
Q 002955 668 GV------------DWETCVSVPDFSWKQIAEPVMKLYTETT----------DGSTIETKESALVWN----FQ------- 714 (863)
Q Consensus 668 ~~------------~w~~~~~~~~~~w~~~v~~i~~~y~~~~----------~gs~ie~k~~~l~~~----y~------- 714 (863)
+. .+.......+ .+.++++++...+.. ...++.... ...+. +.
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a 564 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQA 564 (694)
T ss_pred CcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHH
Confidence 41 0000000111 122333333222211 011111110 00000 00
Q ss_pred -cCC-CC----cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEE--eCC
Q 002955 715 -YAD-PD----FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI--GDD 786 (863)
Q Consensus 715 -~~d-~~----~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlai--GD~ 786 (863)
.+. .+ +-.....+.++.+.+.+....+.+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+
T Consensus 565 ~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs 640 (694)
T PRK14502 565 ELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDS 640 (694)
T ss_pred HHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCc
Confidence 000 00 0000012334455555554466677799999999 5999999999999999 9999999999 999
Q ss_pred cchHHHHHHhhhhcCCC
Q 002955 787 RSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 787 ~ND~~Mf~~ag~~~~~~ 803 (863)
.||++||+.++.+++++
T Consensus 641 ~NDisMLe~Ag~gVAM~ 657 (694)
T PRK14502 641 ENDYSMLETVDSPILVQ 657 (694)
T ss_pred HhhHHHHHhCCceEEEc
Confidence 99999999999865543
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=193.27 Aligned_cols=275 Identities=20% Similarity=0.195 Sum_probs=197.7
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh--Hhhc---CCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYRT---LPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~r~---lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
.++ |+||+|.+..... +..+.++.+.+|..+|... .+.. ...+..+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 445 9999998887766 4568999999997665321 1111 1123344556677899988887666666
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.+.. +. ...++.++|+|+|...+.... . .. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc----h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 123566789999988764211 1 11 1112223567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
...++|+..+.+++|+++ |+.+|... .........+ .+. +....+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL-------GLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc-------CCCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88887432 1112222222 111 2334567789999999999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHH
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 509 (863)
.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 5678999988877776 56899999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+++.+ +.+....+..++++..+++..++++++
T Consensus 333 l~~~~-~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLEDP-ALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HhcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 98744 445555556667788899999998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=206.40 Aligned_cols=280 Identities=13% Similarity=0.112 Sum_probs=180.2
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEE-EEeCCCC---ChhHhhcCCChHHHHHHHHhCCEecccC-HHHH-
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFP---SSEIYRTLPIRDELLRALLNADLIGFHT-FDYA- 267 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~~r~lp~r~eil~~ll~~dligF~t-~~~~- 267 (863)
+..+| |+|++|.+.-.++..+..+.. ++|+.+ .+|. +| ..+.++. ....+.+.+..++.+.+-+ .++.
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 34456 999999998777666665443 456554 4564 32 2221110 0111223333344332222 2222
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDI 346 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 346 (863)
+.+.. . +.....+|.++|+|||...|.. .+........++... .+..+|++|+|+++
T Consensus 471 ~~l~~----~---------------~g~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----W---------------LGVDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----H---------------cCCChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 22221 1 1122346788999999887742 122221122222222 34678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++||.++++++|+++ |+++|. |+. ++++++++++. +....+.|.|.. .++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~l-------gL~~~V~flG~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRL-------GMGERILFTGLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHc-------CCCCcEEEcCCc--chHH
Confidence 9999999999999999999876 888884 333 23344444444 233455677765 4799
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCH--H
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI--D 501 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~--~ 501 (863)
.+|+.||++|+||.+|||+++++|||+| +.|+|+|...|+.+.+. .|++|+|.|. +
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~ 647 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAP 647 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCChH
Confidence 9999999999999999999999999999 56799999988888883 4899998875 6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQ 543 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 543 (863)
+++++|.+++........ ..++.++++ ..+++...++++++
T Consensus 648 ~La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 648 DVAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 899999988865433222 234455555 46787777776654
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.80 E-value=7e-18 Score=187.48 Aligned_cols=268 Identities=16% Similarity=0.154 Sum_probs=190.3
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+..++ |+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999877666666666666678999999954211111 11233445567999988888776665441
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|+|...+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 2234677899999988775221 1122456789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|++++.+++|+++ |+.+|.. +...++ .+.+.+. +..+.+.+.|.++.+|+.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~----~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGDG-----PLRDEL----EALIAEL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEECC-----ccHHHH----HHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 999999988767654 8877732 222233 3333333 2334567788999999999999999
Q ss_pred ceeecccc------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHH
Q 002955 434 CCLVTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVA 504 (863)
Q Consensus 434 v~vvtS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A 504 (863)
++++||.. ||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 9999999999999 56789998877776662 48999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHH
Q 002955 505 EAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWAR 539 (863)
Q Consensus 505 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 539 (863)
++|.++++.+.. +....+..++++. .+++...++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999987644 4444445555553 466655544
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=197.47 Aligned_cols=356 Identities=15% Similarity=0.165 Sum_probs=205.1
Q ss_pred cccccccccCCCCCCCCCCccChhhHHHHHH--HHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEE
Q 002955 153 QHLWPLFHYMLPLSPDLGGRFDRSLWQAYVS--VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 230 (863)
Q Consensus 153 ~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~--vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~fl 230 (863)
.-||-.|+--.+ ..+..+++..-=.|.. +=..|+..+. ....|+++.||++.-....+||++.+.++..|+.
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~~~~i~~~~~~~~---~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLVAWFLGEFAEQFD---DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHHHHHHHHHHhhcc---CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 458999886532 2223444433333421 1122333211 1135999999999999999999888999999999
Q ss_pred eCCCCChhHhhcCCCh-HHHHHHHHhCCEecccC-------HHHHHHHHHH-----HHhhhCceecccCceeeEEEcCeE
Q 002955 231 HSPFPSSEIYRTLPIR-DELLRALLNADLIGFHT-------FDYARHFLSC-----CSRMLGVSYQSKRGYIGLEYFGRT 297 (863)
Q Consensus 231 H~PfP~~e~~r~lp~r-~eil~~ll~~dligF~t-------~~~~~~Fl~~-----~~r~lg~~~~~~~~~~~~~~~gr~ 297 (863)
| +++.-|.|--. ..+-. ++-.|.- .-+.++.++. +.++..++....+. ....+++.
T Consensus 180 H----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~ 248 (590)
T cd03793 180 H----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRK 248 (590)
T ss_pred c----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCC
Confidence 9 55555532110 00000 0000000 0022232221 11222111111110 01223444
Q ss_pred EEEEEeccccCchHHHhhcCC----chHHHHHHH-----HHHHh---CCCeEEEe-ecCccc-ccCHHHHHHHHHHHHHh
Q 002955 298 VSIKILPVGIHIGQLQSVLNL----PETEAKVAE-----LQDQF---KGQIVMLG-VDDMDI-FKGISLKLLAMEQLLSQ 363 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~~~vil~-Vdrld~-~KGi~~~l~A~~~ll~~ 363 (863)
..+ |+|+|||+..|...... ....+++.+ ++.+| .+++++++ +||+++ .||++.+|+|+.++-..
T Consensus 249 pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~ 327 (590)
T cd03793 249 PDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYL 327 (590)
T ss_pred CCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHH
Confidence 333 89999999998643110 011122222 34544 36788888 799999 99999999999987542
Q ss_pred CCC-CCCceEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhhc-----------------------------
Q 002955 364 NPS-KRGKIVLVQIANPARGRG---------RDVQEVQSETHATVRRINKI----------------------------- 404 (863)
Q Consensus 364 ~p~-~~~~vvLvqi~~p~r~~~---------~~~~~~~~~v~~l~~~IN~~----------------------------- 404 (863)
-.. -.++.|+..|..|+...+ .-.+++++.+.++..+|..+
T Consensus 328 l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~ 407 (590)
T cd03793 328 LKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRI 407 (590)
T ss_pred HHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHH
Confidence 111 112334444545664332 22344555566665555555
Q ss_pred ---------------------------------cCC-CCcccEEEEcCCCC------HHHHHHHHHhccceeecccccCC
Q 002955 405 ---------------------------------FGR-PGYQPVVLIDTPLQ------FYERIAYYVIAECCLVTAVRDGM 444 (863)
Q Consensus 405 ---------------------------------~g~-~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~EGm 444 (863)
|.. .+...|+|....++ ..+...+|+.||+||+||.+|||
T Consensus 408 ~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~f 487 (590)
T cd03793 408 FALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPW 487 (590)
T ss_pred HhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCC
Confidence 100 12334554433332 23578899999999999999999
Q ss_pred CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc----ccCC----CceEeC-------CCCHHHHHHHHHH
Q 002955 445 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSLS----GAIRVN-------PWNIDAVAEAMDS 509 (863)
Q Consensus 445 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~----~~l~----~al~Vn-------P~d~~~~A~ai~~ 509 (863)
|++++||||| +.|+|+|..+|.. +.+. .|+.|. |.+++++|++|.+
T Consensus 488 G~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~ 548 (590)
T cd03793 488 GYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYE 548 (590)
T ss_pred CcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHH
Confidence 9999999999 6779999999984 3332 378887 5667899999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
.++++..++........+.....+|.+-+..+++.-
T Consensus 549 ~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 549 FCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred HhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 987764444333333335556677777776665543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=191.42 Aligned_cols=282 Identities=16% Similarity=0.147 Sum_probs=190.7
Q ss_pred CEEEEeCcccchH-HHHHHhhCCCCeEEEEEeCCCCChhHhhc-C--CChH----HHHH-HHHhCCEecccCHHHHHHHH
Q 002955 201 DFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L--PIRD----ELLR-ALLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 201 D~VwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~-l--p~r~----eil~-~ll~~dligF~t~~~~~~Fl 271 (863)
|+|++|...+... ..++-++.-++++.+.+|--||..-.-.. . +... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 9999997655432 23333334457888888866653211100 1 0001 1111 23357888887776666553
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccccc
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 348 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 348 (863)
+ .+ ....++.++|+|||.+.|..... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12345778999999988753211 1123355555 4568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 349 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 349 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
|+..+++|++++ +++|+++ |+++|. |+..++ +++++++. +...| .+.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~~----l~ivG~-----g~~~~~----l~~~~~~~-------~l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDLI----FVICGQ-----GGGKAR----LEKMAQCR-------GLPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCeE----EEEECC-----ChhHHH----HHHHHHHc-------CCCce-EEeCCCCHHHHHHH
Confidence 999999999876 4556554 888873 343333 33343333 12234 45678999999999
Q ss_pred HHhccceeecccccCCCcc----ceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--cccC-CCceEeCCCCHH
Q 002955 429 YVIAECCLVTAVRDGMNLI----PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--SPSL-SGAIRVNPWNID 501 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--~~~l-~~al~VnP~d~~ 501 (863)
|+.||++|+||..|+++++ .+|||+| +.|+|+|..+|. .+.+ ..|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996554 5899999 567889888774 2434 569999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDLERAC 549 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 549 (863)
++|++|.++++++ +++....++.++++. .+++...+++|++.+++..
T Consensus 362 ~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999998764 455555666777775 5899999999988887653
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=195.97 Aligned_cols=293 Identities=10% Similarity=0.049 Sum_probs=183.9
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeE-EEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++...+| |+|+.|++.-.++..+..... .+++ ....|. ++....-+.+-... ..+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 999999999766655554433 4555 444565 33221111110000 12333444332222 33222
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccC
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KG 349 (863)
....+.+.. .++-...+|.++|+|||+..|......+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221121100 0112334678899999998886432111 11122222223 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
....++|+.++++++|+++ |+++|. |+.. +++++++++. +...-+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~----eeLk~la~el-------gL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVGD-----GDLR----AEAQKRAEQL-------GILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEeC-----chhH----HHHHHHHHHc-------CCCCcEEECCC--hhhHHHHH
Confidence 9999999999999999876 888883 3332 3444444443 22233455555 56899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCCCHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPWNIDAVAEA 506 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~d~~~~A~a 506 (863)
+.||+||+||.+||||++++|||+| +.|+|+|..+|+.+.+ + +|++|+|.|+++++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~a 531 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQA 531 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHH
Confidence 9999999999999999999999999 5679999999988877 2 4899999999999998
Q ss_pred HHHHhCCCH--HHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHH
Q 002955 507 MDSALGVSD--AEKQMRHEKHYRYVS-THDVAYWARSFLQDLER 547 (863)
Q Consensus 507 i~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 547 (863)
+..+..+.. .++....++.++++. .+++...++.+++-+..
T Consensus 532 i~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 532 CRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 854433221 222233455677664 58888888888766543
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.3e-18 Score=185.24 Aligned_cols=283 Identities=19% Similarity=0.169 Sum_probs=200.4
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh----cCCChHHHHHHHHhCCEecccCHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR----TLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r----~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444455 999999999888776 4455668999999999887543211 00111222334456788888777666
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHH---hCCCeEEEeecCc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ---FKGQIVMLGVDDM 344 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~---~~~~~vil~Vdrl 344 (863)
..+.+. +.....++.++|+|++...+... + ...+.. ..+++.++++||+
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPA---P------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCcc---c------hHHHhhcCCcCCCeEEEEecch
Confidence 655431 01112467788999998876421 1 111111 1456889999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002955 345 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 424 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~e 424 (863)
++.||+..+++|+..+.+++|+++ |+.+|. ++....+++. +++. +..+-+.+.+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~----~~~~-------~~~~~v~~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEAL----AAEL-------GLGDRVTFLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHH----HHHh-------CCCcceEEEeccChhh
Confidence 999999999999999988887655 887772 2333333333 2222 1223456678999999
Q ss_pred HHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHH
Q 002955 425 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNID 501 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~ 501 (863)
+..+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .|+++++.|++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~ 329 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPE 329 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHH
Confidence 999999999999999999999999999999 56799999988888874 48999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHh-hhhccCCHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHY-RYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 545 (863)
+++++|.++++.++..+ ...+..+ .....+++..+++.+++.+
T Consensus 330 ~l~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 330 ALAEAILRLLDDPELRR-RLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHcChHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 99999999998664433 3334444 4567789999988877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-18 Score=187.24 Aligned_cols=274 Identities=18% Similarity=0.223 Sum_probs=181.3
Q ss_pred CCEEEEeCcc-cchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHH------HHHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL------LRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~ei------l~~ll~~dligF~t~~~~~~Fl~ 272 (863)
.|+|++|+.. ....+.....+..+.++.+..|-.++....... +.+..+ ...+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 3999999843 322332222233478899999976654331000 011110 11223456666555333322211
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
.+...++.++|+|+|.+.+... +.... ++.+ .++.+++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAAL---PSRGR-----RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcc---hhhhh-----hhhccCCCCCcEEEEEeCcchhcC
Confidence 1223467789999999877532 11111 2222 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+.++.+++|+++ |+.+|... .. +. ..+..++.+. +..+.+.+.|.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~~-~~---~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---GG-YR---AELKQIAAAL-------GLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---cc-hH---HHHHHHHHhc-------CccceEEEcCCCChHHHHHHH
Confidence 9999999999999888876 88887422 11 11 2222222222 233455678899999999999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C-ceEeCCCCHHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-AIRVNPWNIDAVAEAM 507 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~-al~VnP~d~~~~A~ai 507 (863)
+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 9999999999999999999999999 56799999988887773 3 4555 55679999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 542 (863)
.++++++ +++....++.+++ ...+++...++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999887 5555556666666 46677777777654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-18 Score=187.54 Aligned_cols=283 Identities=18% Similarity=0.178 Sum_probs=189.2
Q ss_pred HhhcCCCCCEEEEeCcc-c---chHHHHHH-hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHH
Q 002955 193 MEVISPDDDFVWVHDYH-L---MVLPTFLR-KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyh-l---~llp~~lr-~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+...+| |+|.+|+++ + +......+ .+..+.++.+.+|.+.|...... ...-...-+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344455 899998733 2 11111111 12357899999998622221111 01112223445898888865555
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 347 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 347 (863)
++++... ...++.++|+|++...+... .. .++ .....++.+|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~-----~~--~~~-~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPP-----ES--LKA-LGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCc-----hh--hHh-hcCCCCCeEEEEEeeccCC
Confidence 5554310 02366778999997765421 11 111 1122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc-EEEEcCCCCHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERI 426 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p-v~~~~~~v~~~el~ 426 (863)
||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+. +..+ |.++.+.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~-------~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL-------GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc-------CCCCcEEEecCcCCHHHHH
Confidence 999999999999998888766 88887422 11111111111122222 2222 44444559999999
Q ss_pred HHHHhccceeeccccc--CCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceEeCCCCHH
Q 002955 427 AYYVIAECCLVTAVRD--GMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNPWNID 501 (863)
Q Consensus 427 aly~~ADv~vvtS~~E--GmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~VnP~d~~ 501 (863)
.+|+.||++++||..| |++++++|||+| +.|+|+|..+| .+.+ ..|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 56789999888 6666 348999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
++|++|.++++.+ +.+....++.++++.++++..+++++.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999865 344555667788888899999999887644
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-17 Score=189.68 Aligned_cols=272 Identities=13% Similarity=0.097 Sum_probs=187.3
Q ss_pred CCCCCEEEEeCcccch-HHHHHHhhCCCCeEEEEEeCC--CCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 197 SPDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSP--FPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 197 ~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~P--fP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+++.|+++.|-+|... .-.+++++....++....|-. ++.....+.++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3445777777655433 334567776666789999942 1111111111222222 346899988887666544321
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765321 011456789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI-- 431 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~-- 431 (863)
++|+.++.+++|+.. +.++.+|. |+..++++ +++++. +..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~-------~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESK-------PENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhc-------CCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999988764 66777763 34333333 333321 11234567889999999999986
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCC---ceEeCC-CCHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNP-WNIDAVAEAM 507 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---al~VnP-~d~~~~A~ai 507 (863)
||+++.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 68899999999999999999999 567999999998888843 688876 4899999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
.++++. ++++....++.++++ ..+++..+.++|+
T Consensus 372 ~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFIDN-EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999984 455555566667666 4588888877765
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=179.03 Aligned_cols=190 Identities=18% Similarity=0.140 Sum_probs=118.3
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc----
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG---- 668 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~---- 668 (863)
+|++|+||||++ .+. ++++++++|++| ++.|+.|+++|||+...+..++..+. ..++|++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 333 556799999998 78899999999999999999887763 34799999999988542
Q ss_pred ----------e-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeee---c----cceeEeec------ccCCCCcchhh
Q 002955 669 ----------V-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET---K----ESALVWNF------QYADPDFGSCQ 724 (863)
Q Consensus 669 ----------~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~---k----~~~l~~~y------~~~d~~~~~~~ 724 (863)
. .+...++ .+.++++++...+..+-.++.. . ...+.... +.....+-..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~------~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP------VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCC------HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 1 2222221 1223333332222111010000 0 00000000 0000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC--CcceEEEEeCCcchHHHHHHhhhh
Q 002955 725 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM--LPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 725 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.++.+..+.+.+....+.+..+..++++. +++|||.|++++++.+ ++ +..++++|||+.||++||+.+|.+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~~ 221 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDLA 221 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCCc
Confidence 11112223333333456666677778865 5999999999999988 65 666899999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=193.16 Aligned_cols=271 Identities=14% Similarity=0.100 Sum_probs=178.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh-Hhhc---C-CChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 199 DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE-IYRT---L-PIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 199 ~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~~r~---l-p~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+.|+|.++--+.. .+..+ +..+.+++..++|.-.=+.. .-.. + +.-+..++.+-.+|.|-..|..-.+.....
T Consensus 211 ~~di~i~dr~~~~-~~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGI-GQAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCccc-chHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 3588888754543 34444 55668999999995431000 0000 0 111222333444677766665443333221
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.. .+.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~----------------~~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FK----------------KYYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hh----------------hhcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 11 1122234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|+.++.+++|+++ |+++|. |++. +++++++++.+ ....+.+.|+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999876 888873 3332 34444444432 12234566654 5778999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc-cCcccC-C--CceEeCC----CC----HH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSL-S--GAIRVNP----WN----ID 501 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-G~~~~l-~--~al~VnP----~d----~~ 501 (863)
++|+||.+||||++++||||| |.|+|+|... |..+.+ + +|++|+| .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 999999999999999999999 5679999986 666666 2 4899973 34 89
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
++|++|.++|+ +.+++...+..++....+++..-++++.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 34556666677777888888888877776554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=183.26 Aligned_cols=282 Identities=21% Similarity=0.227 Sum_probs=195.7
Q ss_pred hcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHH
Q 002955 195 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCC 274 (863)
Q Consensus 195 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~ 274 (863)
..++ |+|++|......+...+..+..++++.+..|.+++....... ..+......+-.+|.+-+.+......|.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655444444444444458899999987764332211 1233334456678999988877766665410
Q ss_pred HhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHH
Q 002955 275 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 354 (863)
Q Consensus 275 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 354 (863)
.....+.++|+|+|...+.... ......+ ....++..++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 1123567889999988775321 1111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002955 355 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 434 (863)
Q Consensus 355 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 434 (863)
+|++.+.+++|+++ |+.+|. ++....+++. ++.. +..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~----~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGD-----GPLREALEAL----AAEL-------GLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcC-----CcchHHHHHH----HHhc-------CCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877655 777763 2232233322 2222 33445667889999999999999999
Q ss_pred eeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002955 435 CLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 435 ~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 511 (863)
++.||..||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 56799999888877773 358999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 512 GVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 512 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
+++.. +...+........+++..+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 88754 2222333344455788888887776654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=183.24 Aligned_cols=281 Identities=16% Similarity=0.172 Sum_probs=189.5
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH-HhCCEecccCHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l-l~~dligF~t~~~~~~Fl~ 272 (863)
+..+| |+|.+|+++.......+.......++.+..|..++...-. .......+.+-+ -.+|.+-..+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 44466 9999999998777777666546789999999776543200 001111111111 2356654444433333322
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235667899999887753211 112233344 45788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+.++.+++|+++ |+.+|... .....+.. .. ... +..+.+.+.+. .+++..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~----~~---~~~---~~~~~v~~~g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELL----AL---KEL---GLEDKVILLGE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHH----HH---Hhc---CCCceEEEccc--cccHHHHH
Confidence 9999999999998888765 88777432 21222221 11 111 12233444453 46899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-CceEeCCCCHHHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMD 508 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~al~VnP~d~~~~A~ai~ 508 (863)
+.||++++||..||+|++++|||+| +.|+|+|..+|..+.+. .|+++++.|+++++++|.
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~ 327 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIE 327 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999 56799999999888775 589999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHH
Q 002955 509 SALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQD 544 (863)
Q Consensus 509 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 544 (863)
++++++ +++....++.++++. .+++...++.+.+-
T Consensus 328 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 328 ALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999876 445555566666664 47888888877653
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=185.24 Aligned_cols=270 Identities=19% Similarity=0.240 Sum_probs=183.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCC---ChH----HH-HHHHHhCCEecccC
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP---IRD----EL-LRALLNADLIGFHT 263 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp---~r~----ei-l~~ll~~dligF~t 263 (863)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+...+ ... .+ ...+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3445566 89999987554444444334457899999998876332111111 000 11 12234578887777
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEe
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLG 340 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~ 340 (863)
......+.. .+....+.++|+|+|...+.... ... .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 654443322 01122377899999988765321 111 12222 45788999
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002955 341 VDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420 (863)
Q Consensus 341 Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v 420 (863)
+||+.+.||+..+++|+..+.++.|+++ |+.+|. ++.. .++.+++++. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHc-------CCCCcEEEeccC
Confidence 9999999999999999999988877655 887773 2222 2333333332 122345667899
Q ss_pred CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCC
Q 002955 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 497 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP 497 (863)
+.+++..+|+.||+++.||..||+|++.+|||+| +.|+|+|...|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEeCC
Confidence 9999999999999999999999999999999999 56789999888887773 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
.|. +++++|.++++++... +...++.++++..++
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999877543 445555666666554
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=184.88 Aligned_cols=274 Identities=18% Similarity=0.160 Sum_probs=188.9
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCCh----HHHHH-HHHhCCEecccCHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR----DELLR-ALLNADLIGFHTFDYAR 268 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r----~eil~-~ll~~dligF~t~~~~~ 268 (863)
+..+| |+|++|..-...+...+-.+..++++.+++|..||..-........ ..+.+ -.-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55566 8999996544322223322334688999999888733221111111 11222 23357888777776554
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCccc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDI 346 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~ 346 (863)
.+.. .+ ...+.++|+|+|...|...... . ..++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~---~----~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD---E----ALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc---H----HHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1245678999998877532111 1 112222 45788999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+...++|+.++.++ |+++ |+.+|. +++...++ . . .+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~--------~-~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A--------R-YPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c--------c-CCcEEEEeccCHHHHH
Confidence 99999999999999877 7665 887773 22222222 0 0 1123456679999999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~ 503 (863)
.+|+.||+++.||..||||++++|||+| +.|+|+|...|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 56799999999888774 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+++|.++++.+ +++....+..++.+..+++..+++++++.+
T Consensus 323 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999765 444555566677777889999888887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.4e-18 Score=193.32 Aligned_cols=186 Identities=11% Similarity=0.031 Sum_probs=125.7
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD-M-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdr-l-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.++.++|+|||++.+... ++. ...+ ...++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 367889999997543211 000 0001 1246778999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|... ... . ..|.++....+..++..+|+.||+||+||..|||++|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 88421 100 0 01333332336789999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh-hccC
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTH 532 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 532 (863)
+.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+... +......+.++. ...+
T Consensus 330 ------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 330 ------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred ------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 67899999999887773 599999999999998654322110 000011223333 4558
Q ss_pred CHHHHHHHHHHHH
Q 002955 533 DVAYWARSFLQDL 545 (863)
Q Consensus 533 ~~~~W~~~~l~~l 545 (863)
+....++++++-.
T Consensus 390 s~~~~~~~y~~lY 402 (405)
T PRK10125 390 SGQQMLEEYVNFY 402 (405)
T ss_pred CHHHHHHHHHHHH
Confidence 8888888877644
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-17 Score=182.78 Aligned_cols=274 Identities=17% Similarity=0.198 Sum_probs=192.0
Q ss_pred CEEEEeC-cccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-CC-------hHHH-HHHHHhCCEecccCHHHHHHH
Q 002955 201 DFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PI-------RDEL-LRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 201 D~VwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~-------r~ei-l~~ll~~dligF~t~~~~~~F 270 (863)
|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+ ...+..+|.+-+.+...++.|
T Consensus 101 D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~ 180 (394)
T cd03794 101 DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYL 180 (394)
T ss_pred CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 9999998 445556666655556899999999988754332111 11 1111 123456899988888777766
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.. .+ ....++.++|+|++...+...... ..... .....++.+++++||+.+.||+
T Consensus 181 ~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 181 VR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred Hh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 52 01 122356789999998877532111 11111 1122567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++.+. |+++ |+.+|. ++....+++.+. .- +...|.++ +.++.+++.++|+
T Consensus 236 ~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~~v~~~-g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----AL-------GLDNVTFL-GRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----Hc-------CCCcEEEe-CCCChHHHHHHHH
Confidence 9999999999776 6655 877773 333333333211 11 22335444 5899999999999
Q ss_pred hccceeecccccCC-----CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHH
Q 002955 431 IAECCLVTAVRDGM-----NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDA 502 (863)
Q Consensus 431 ~ADv~vvtS~~EGm-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~ 502 (863)
.||++++||..|++ +++.+|||+| |.|+|+|..+|..+.+. .|+++++.|+++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 354 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVPPGDPEA 354 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeCCCCHHH
Confidence 99999999999876 5557999999 56799999999888883 489999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSF 541 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 541 (863)
++++|.++++.+ +++....++.++++. .+++..+++++
T Consensus 355 l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 355 LAAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999644 555555666677776 68888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=187.43 Aligned_cols=280 Identities=16% Similarity=0.103 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC---ChhHhhcC-CChHHHHHHHHhC
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP---SSEIYRTL-PIRDELLRALLNA 256 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~~r~l-p~r~eil~~ll~~ 256 (863)
..+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555443 22 349999987776655 23333345667788885421 11110001 1123455556678
Q ss_pred CEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCe
Q 002955 257 DLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI 336 (863)
Q Consensus 257 dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 336 (863)
|.|.+.|..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 888888876666554321 1 011267899999987764210 0113566
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~ 416 (863)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.. +....++.. +.+. +....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~----~~~~-------~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKEL----IEEL-------GLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHH----HHHc-------CCcceEEE
Confidence 89999999999999999999999999999877 8878743 222233322 2222 22234556
Q ss_pred cCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc-cCcccCC---Cc
Q 002955 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS---GA 492 (863)
Q Consensus 417 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-G~~~~l~---~a 492 (863)
.| ..+++..+|+.||++|+||..||||++.+|||+| |.|+|+|+.. |..+.+. .|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCCc
Confidence 66 3567999999999999999999999999999999 5678998877 6666662 48
Q ss_pred eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 002955 493 IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539 (863)
Q Consensus 493 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 539 (863)
++++|.|++++|++|..+++.+ +.+....++.++...++++..+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999876 344444555565566666665554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.3e-18 Score=185.78 Aligned_cols=194 Identities=17% Similarity=0.194 Sum_probs=140.9
Q ss_pred eccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC
Q 002955 303 LPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 382 (863)
Q Consensus 303 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 382 (863)
+|.|||.+.|.+... ...+.++++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998863210 11112222222235667899999999999999999999999999999876777876651
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc--CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcc
Q 002955 383 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID--TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 460 (863)
Q Consensus 383 ~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 460 (863)
. .+ . + .+..+ .|.++. |.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~----~----l~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~------ 246 (335)
T PHA01633 192 --K---QF----T----Q----LEVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM------ 246 (335)
T ss_pred --H---HH----H----H----cCCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc------
Confidence 1 11 1 1 11111 244443 6778999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccEEecccccCcccCCC---------------------ceEeCCCCHHHHHHHHHHHhCCCHHHHH
Q 002955 461 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---------------------AIRVNPWNIDAVAEAMDSALGVSDAEKQ 519 (863)
Q Consensus 461 ~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~ 519 (863)
|.|+|+|..+|..+...+ |+.++++|++++|++|.+++.+.+.+
T Consensus 247 -------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~-- 311 (335)
T PHA01633 247 -------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE-- 311 (335)
T ss_pred -------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--
Confidence 567888888776664321 45778899999999999998876433
Q ss_pred HHHHHHhhhhccCCHHHHHHHHH
Q 002955 520 MRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 520 ~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+|..+.++..+++++..-+++|+
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33445567788888888777664
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=179.90 Aligned_cols=264 Identities=13% Similarity=0.111 Sum_probs=178.9
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+..+| |+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 999999988222222222221 4788889977654322110 111123334457877776665441110
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112356778999998765421 12457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+. +..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKEL-------GLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHHc-------CCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888766 777773 223223332 33333 23345556665 789999999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C---CceEeCCCCHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S---GAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~---~al~VnP~d~~~~A~ai~~ 509 (863)
++++||..||||++++|||+| +.|+|+|...|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 5678999876655544 2 5899999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+++.++ .++...++.++.+..+++..++++|.
T Consensus 316 ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDEE-LRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCHH-HHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 998653 33344444567778888888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=173.67 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=127.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~ 670 (863)
.|+||+||||||++ ++...++.++++|++| ++.|+.|++||||+...+..+...+. ..++|++||+.|..+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 47999999999999 5677889999999998 88999999999999999999998773 34799999999997643
Q ss_pred EEe-----------------ecCCCCccHHHHHHHHHHHHhhcCC--------------Cceee------eccceeEeec
Q 002955 671 WET-----------------CVSVPDFSWKQIAEPVMKLYTETTD--------------GSTIE------TKESALVWNF 713 (863)
Q Consensus 671 w~~-----------------~~~~~~~~w~~~v~~i~~~y~~~~~--------------gs~ie------~k~~~l~~~y 713 (863)
|.. .....-..|+..+..+-+.+..... |.-.+ .++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 0000011233333333222211000 00000 0111111111
Q ss_pred ccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEec------------------C---CCCHHHHHHHHHHHHhh
Q 002955 714 QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKP------------------Q---GVNKGLVAQHQLETMHQ 772 (863)
Q Consensus 714 ~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~~ 772 (863)
... ... +.+.+...++.+..|..++.+.. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~----~~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PAR----LREAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHH----HHHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 110 011 15556667788889998888886 5 89999999999999844
Q ss_pred cCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 773 KGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 773 ~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.. ..=.++++|||.||++||+++...+
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~v 249 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQKV 249 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCeeE
Confidence 33 3348999999999999999998743
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.9e-17 Score=177.31 Aligned_cols=262 Identities=15% Similarity=0.161 Sum_probs=177.4
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++++..+| |+|++|.+..+.++.....+..++++.+++|-.|+...... .+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~------~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQG------LFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhh------hhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 89999988655444433333346899999997654321111 1111 1277777776555555
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 431 1 11246788999999987642210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++.+ ++++ |+++|... ......... +..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHHH
Confidence 999999998876 5544 88887432 111111111 1123456778999999999999
Q ss_pred hccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHH
Q 002955 431 IAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEA 506 (863)
Q Consensus 431 ~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~a 506 (863)
.||++++||. .||++++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999997 79999999999999 56799999988888773 4899999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 507 MDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 507 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
|.++++.+ +.++...+..++.+.. ..+++++++
T Consensus 323 i~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99999844 3444444444444432 444444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-17 Score=183.46 Aligned_cols=240 Identities=15% Similarity=0.131 Sum_probs=163.7
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhC-CCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 269 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~ 269 (863)
++++..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 999999987777666666543 23456666776554332211 11234678877766554444
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcc--cc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMD--IF 347 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld--~~ 347 (863)
+.. .|+. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1211 1245668999997654311 01 013467899999996 45
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC--CHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL--QFYER 425 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v--~~~el 425 (863)
||+..+++|+.++. + ++.|+++|. |++.+++ ++++++.| ...-+.+.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l----~~~~~~~~-------l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKC----KAYSRELG-------IEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHH----HHHHHHcC-------CCCeEEEecccCCcHHHH
Confidence 99999999998762 2 355888883 3443333 34444332 22234555654 55899
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc-cccCcccCC---CceEeCCCCHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCSPSLS---GAIRVNPWNID 501 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe-~~G~~~~l~---~al~VnP~d~~ 501 (863)
..+|+.||++|+||..||||++++||||| +.|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 56799999 888877773 38999999999
Q ss_pred HHHHHHHHHhCCCH
Q 002955 502 AVAEAMDSALGVSD 515 (863)
Q Consensus 502 ~~A~ai~~aL~m~~ 515 (863)
++|++|.++++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998774
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=175.88 Aligned_cols=277 Identities=16% Similarity=0.147 Sum_probs=188.6
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-CChHHHH-HHHHhCCEecccCHHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PIRDELL-RALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~r~eil-~~ll~~dligF~t~~~~~~F 270 (863)
++..+| |+|++|..+..++..++.+.....++.+.+|...+........ .....+- ..+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 344566 8999998888777777776566678888888653321110000 0001111 22335788888888777766
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 542 100 01234567799999887642211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|++.+.+++|+++ |+.+|.... .+ ..... ++... +..+.+.+.+. .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~-------~~~~~v~~~g~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKL-------GLEGRVEFLGF--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhc-------CCcceEEEeec--cccHHHHHH
Confidence 999999999988888766 888874331 11 11111 11111 11223344444 678999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
.||++++||.+||||++++|||+| |.|+|+|+..|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 999999999999999999999999 56799999999988873 38999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 542 (863)
.+++..+ +.+....++.+++ ...+++..+++.++
T Consensus 324 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9988755 3344444555666 56688888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=174.66 Aligned_cols=193 Identities=20% Similarity=0.328 Sum_probs=119.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc---CCceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC---EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l---~~l~liaenGa~I~~~~~ 668 (863)
.++|++|+||||++ .+..-..+..+.++ ....+++.++++|||+.....+.+... .+..+|+.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 12222344445555 235889999999999999999988764 23568899999998833
Q ss_pred eeEEeecCCCCccHHHH---------HHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCC
Q 002955 669 VDWETCVSVPDFSWKQI---------AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE 739 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~---------v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~ 739 (863)
.|. .+..|.+. +.+++..+.+-.+..-.....+.+.+.+...+ ....++.|++.+...
T Consensus 77 -~~~-----~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQ-----PDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp -TTE-----E-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred -CCc-----ChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 121 12233332 22333333211111111112223333333221 122345566666555
Q ss_pred Ce---EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe
Q 002955 740 PV---SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV 816 (863)
Q Consensus 740 ~~---~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 816 (863)
.+ .+.++...++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 43 34568899999999999999999999999 999999999999999999995543 36788
Q ss_pred CCC
Q 002955 817 GQK 819 (863)
Q Consensus 817 G~~ 819 (863)
|+.
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 874
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.2e-17 Score=183.23 Aligned_cols=269 Identities=12% Similarity=0.066 Sum_probs=166.4
Q ss_pred HhhcCCCCCEEEEeCcccchH---HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVL---PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 269 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~ 269 (863)
++..+| |+|.+|+--.+.. ...+++++ .. +..++|+.|+.+--+.-.......+...+ ..+++.
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~---------~~~~~r 178 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEYVKREKNGRVKAFLLKYI---------NSWVVD 178 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHHHHHhccchHHHHHHHHH---------HHHHHH
Confidence 345567 9999998655554 34555555 34 77799998854321110001112222111 112222
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CC--CeEEEeecCcc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KG--QIVMLGVDDMD 345 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vdrld 345 (863)
| .|+.++.++... . ++... +...+.|||.+.|..... . +++.+ .+ .+++++||||.
T Consensus 179 ~--~~d~vi~pS~~~-~-----~l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGRL~ 238 (462)
T PLN02846 179 I--YCHKVIRLSAAT-Q-----DYPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGKMV 238 (462)
T ss_pred H--hcCEEEccCHHH-H-----HHhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEecCc
Confidence 2 144444433211 1 01111 222357999988763211 0 11222 12 35799999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002955 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 425 (863)
Q Consensus 346 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el 425 (863)
+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+ .+.+ .. ++++.|..+.+
T Consensus 239 ~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a----~~l~-------l~-~~vf~G~~~~~-- 295 (462)
T PLN02846 239 WSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAA----EKLE-------LD-VRVYPGRDHAD-- 295 (462)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHH----HhcC-------Cc-EEEECCCCCHH--
Confidence 99999999999999988888865 88777 566655555544 3332 11 34566655444
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDA 502 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~ 502 (863)
++|+.+||||+||.+||||+|.+||||| |.|+|++...| .+.+. +|+.+ .|.++
T Consensus 296 -~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~ 352 (462)
T PLN02846 296 -PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DDGKG 352 (462)
T ss_pred -HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CCHHH
Confidence 6899999999999999999999999999 56688888776 45552 35555 48999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
++++|.++|+.++.+...+ .+ ..++|..-+++|++.++
T Consensus 353 ~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 353 FVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 9999999998554332211 11 36777777777776554
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=178.70 Aligned_cols=165 Identities=8% Similarity=0.064 Sum_probs=123.4
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHh------CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQ------NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~------~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
+..++++++|+.+.||+..+++|+..+.+. +|++ .|+++|. |+..+++++ ++++.
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i----~l~ivG~-----G~~~~~l~~----~~~~~------ 291 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKL----LCIITGK-----GPLKEKYLE----RIKEL------ 291 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCE----EEEEEec-----CccHHHHHH----HHHHc------
Confidence 346888999999999999999999998763 3544 4888883 344334444 33333
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeec---ccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVT---AVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
+...++++.+.++.+++..+|++||++|++ +..+||+++++||||| +.|+|+|...|
T Consensus 292 -~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~ 351 (415)
T cd03816 292 -KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKC 351 (415)
T ss_pred -CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCC
Confidence 334578888889999999999999999864 3358899999999999 56799999988
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 485 CSPSLS---GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 485 ~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
+.+.+. +|++|+ |++++|++|.++++++ +++++...++.+++.. ..|.+.+.+
T Consensus 352 ~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 352 IDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 888773 488884 9999999999999872 4555555555555543 446555543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=174.11 Aligned_cols=211 Identities=14% Similarity=0.081 Sum_probs=148.8
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG 334 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~ 334 (863)
.+|.|-..+......+.+. |+. ...++.++|+|||.+.|..... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 4788887777655554331 110 0124677899999988752210 0134
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+.++++++|+.+.||+..+++|++++.+++|+++ |+.+|.. .. +. ++. .+ .+
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~----~~------~~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF----GL------NG----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc----cc------cc-----
Confidence 5567777899999999999999999988888765 8877721 11 11 110 01 11
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C--
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-- 491 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~-- 491 (863)
+.+.++.+++..+|+.||+||+||..||||++++||||| |.|+|+|..+|.++.+. +
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-------------------G~PVIas~~gg~~E~i~~~~n 253 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-------------------GLDVVVTEKGAWSEWVLSNLD 253 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-------------------CCCEEEeCCCCchhhccCCCc
Confidence 234688999999999999999999999999999999999 56799999888787763 2
Q ss_pred --------------------ceEeCCCCHHHHHHHHHHHhCCC-HHHHHHHHHH-HhhhhccCCHHHHHHHHHHHHH
Q 002955 492 --------------------AIRVNPWNIDAVAEAMDSALGVS-DAEKQMRHEK-HYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 492 --------------------al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
|++++| |.+++++++.++|..+ +++++.+... .....+++++...++++++-++
T Consensus 254 g~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 254 VYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred eEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444555 7888999999999764 2334443333 4445677999999999887764
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=183.73 Aligned_cols=265 Identities=12% Similarity=0.078 Sum_probs=163.7
Q ss_pred hhcCCCCCEEEEeCc-ccchH--HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 194 EVISPDDDFVWVHDY-HLMVL--PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 194 ~~~~p~~D~VwvhDy-hl~ll--p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
...+| |+|++|.- ||-.. .....+++. ++...+|+.||.+=-+.-+..-+.++. .++++|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHH
Confidence 34456 89999864 34444 333444443 699999999985433322222122111 123334
Q ss_pred HHH--HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcc
Q 002955 271 LSC--CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 345 (863)
Q Consensus 271 l~~--~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 345 (863)
+.. |.+++.++.... .+. +.+ |. ...|||++.|.+... .. .. .++ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq------~L~-~~v-I~-nVnGVDte~F~P~~r---~~----~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQ------DLP-KSV-IC-NVHGVNPKFLKIGEK---VA----EE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHH------Hhc-ccc-ee-ecccccccccCCcch---hH----HH-HhcCCccccCceEEEEccc
Confidence 333 566666542211 111 111 11 115999998864211 11 11 122 1224589999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002955 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 425 (863)
Q Consensus 346 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el 425 (863)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++. +.+.+ . .|.+ .+.. ++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~l----a~eLg-------L-~V~F-LG~~--dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRA----AKRLD-------L-NLNF-LKGR--DHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHH----HHHcC-------C-EEEe-cCCC--CCH
Confidence 99999999999999988888765 88887 45554445444 33332 1 1444 3443 334
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCCCHHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPWNIDA 502 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~d~~~ 502 (863)
.++|+.|||||+||.+||||+|++||||| |.|+|++...|.. .+ . ++++ +.|.++
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~-------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~Ea 670 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM-------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTSED 670 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCCEEEecCCCCc-eEeecCCeEe--cCCHHH
Confidence 58999999999999999999999999999 5678999888743 34 2 3443 478999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
++++|.++|..++. + ..++. ...+++..-++++++.
T Consensus 671 fAeAI~~LLsd~~~-r-l~~~a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 671 FVAKVKEALANEPQ-P-LTPEQ----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHHhCchh-h-hHHHH----HhhCCHHHHHHHHHHh
Confidence 99999999987652 2 22222 2256767666666543
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=172.57 Aligned_cols=258 Identities=17% Similarity=0.156 Sum_probs=171.8
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHH-HHHHHHhCCEecccCHHHHHHHHHHHHhhhC
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLG 279 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg 279 (863)
|+|++|+...+.....+... .+.+..+++|...-....+. ..... .-..+..||.+-..+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999976544332222222 46788899996432221110 11111 223456688888777766654432 0 0
Q ss_pred ceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHH
Q 002955 280 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359 (863)
Q Consensus 280 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 359 (863)
....++.++|+|+|...+..... . .........++.+|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 11135678899999887653211 1 01111112567899999999999999999999988
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecc
Q 002955 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTA 439 (863)
Q Consensus 360 ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS 439 (863)
+. ++.|+.+|. ++... ++.+++.+. +..+-+.+.|.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGE-----GPLEA----ELEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeC-----ChhHH----HHHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 63 455888873 23222 333333222 2233456788999999999999999999999
Q ss_pred c--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC----CceEeCCCCHHHHHHHHHHHhCC
Q 002955 440 V--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS----GAIRVNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 440 ~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m 513 (863)
. .||||++++|||+| +.|+|+|+..|..+.+. .|++++|.|+++++++|.++++.
T Consensus 272 ~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 272 VERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED 332 (357)
T ss_pred cccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC
Confidence 6 59999999999999 56799999888887662 37899999999999999999986
Q ss_pred CHHHHHHHHHHHhhhhcc
Q 002955 514 SDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 514 ~~~er~~r~~~~~~~v~~ 531 (863)
+ ++++...++.++++.+
T Consensus 333 ~-~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 333 P-ELRERLGEAARERAEE 349 (357)
T ss_pred H-HHHHHHHHHHHHHHHH
Confidence 5 4444445555655543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.2e-16 Score=169.88 Aligned_cols=247 Identities=19% Similarity=0.164 Sum_probs=165.7
Q ss_pred hhcCCCCCEEEEeCc-ccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 194 ~~~~p~~D~VwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
...+| |+|++|++ ...++. .+..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLA-LLAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHH-HHHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33456 99999998 444444 444444 7899999998876432111 111112334456688888777766655543
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHH
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISL 352 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~ 352 (863)
.. + ....++.++|+|+|...+...... .. . .....++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHH
Confidence 21 1 113467788999998877532110 00 0 011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 002955 353 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 432 (863)
Q Consensus 353 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 432 (863)
.++|++++.+++++++ |+.+|.. +...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhC
Confidence 9999999988877765 8877732 2323333 3333332 22334455554 4688999999
Q ss_pred cceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHH
Q 002955 433 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 433 Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 509 (863)
|++|.||..||||++++|||+| +.|+|+|+..|..+.+. .|++++|.|.+++++++..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 9999999999999999999999 56799999998888773 4899999999999544444
Q ss_pred HhC
Q 002955 510 ALG 512 (863)
Q Consensus 510 aL~ 512 (863)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=173.18 Aligned_cols=189 Identities=15% Similarity=0.151 Sum_probs=134.6
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCceEE
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGISLKL----LAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 373 (863)
++.++|+|||.+.|......+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567789999998885321100 111 3567899999999999999887 56667777889877 8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeee
Q 002955 374 VQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYI 452 (863)
Q Consensus 374 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~ 452 (863)
+++|.. +. . ++.++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 888732 22 1 2222211 11134567776 68999999999999996 699999999999
Q ss_pred eeecCCcccccccCCCCCCCCCccEEecccccCcccC--CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-
Q 002955 453 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV- 529 (863)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 529 (863)
+| |.|+|+|..++..... ..|+++. .|++++|++|.++++.+ +.++...++.++++
T Consensus 320 a~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AM-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANP-AEREELGQAARRRVL 378 (397)
T ss_pred Hc-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHH
Confidence 99 5668888764322111 2478885 89999999999999754 44555566677777
Q ss_pred ccCCHHHHHHHHHHHH
Q 002955 530 STHDVAYWARSFLQDL 545 (863)
Q Consensus 530 ~~~~~~~W~~~~l~~l 545 (863)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4689998888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=170.82 Aligned_cols=245 Identities=16% Similarity=0.170 Sum_probs=161.1
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC----ChhHh-hcCCC-------------hHHHHHHHHhCCEecc
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEIY-RTLPI-------------RDELLRALLNADLIGF 261 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~-r~lp~-------------r~eil~~ll~~dligF 261 (863)
.|+|+++.. .+....+ ..++.+..+++|.|.+ ..+.+ ...+. +.-..+.+-.+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643 2222222 4457888899998631 11111 11110 0011123456777777
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEee
Q 002955 262 HTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGV 341 (863)
Q Consensus 262 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 341 (863)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 776655555321 1 11 124678999988764210 234579999
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002955 342 DDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 421 (863)
Q Consensus 342 drld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~ 421 (863)
||+.+.||+..+++|++++ | ++ |+.+|. +++.+++++ .. .+-+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~---------~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA---------GPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc---------CCCEEEecCCC
Confidence 9999999999999999865 4 44 787873 333333322 11 12245668999
Q ss_pred HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCC
Q 002955 422 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPW 498 (863)
Q Consensus 422 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~ 498 (863)
.+++.++|+.||++++||. ||||++++|||+| +.|+|+|..+|..+.+ . .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-------------------GTPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-------------------CCCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 9999999999999 5679999998888777 2 48999999
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHH
Q 002955 499 NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540 (863)
Q Consensus 499 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 540 (863)
|++++|++|..++++++.. .+.+++....+++....++
T Consensus 312 ~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 312 TVESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred CHHHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHHH
Confidence 9999999999999877411 2233333444555554443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=168.08 Aligned_cols=246 Identities=15% Similarity=0.075 Sum_probs=162.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl 271 (863)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .........+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3344455 9999999888776 2 334568899999987643211 122333334433322222111100
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHH
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 351 (863)
.. .++.++|+|+|++.|... ..++..++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 00 456789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+.+ ++++ |+++|... ....+...+.+... ..+-+.+.|.++..++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88887432 21222222221110 1123466789999999999999
Q ss_pred ccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 432 AECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 432 ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
||++|+||. .||||++++|||+| +.|+|+|+.+|..+.+. .|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 56799999999888773 4789987 99999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQ 543 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~ 543 (863)
.+++.++.+. .++. ...+++..-++++++
T Consensus 303 ~~l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 9987654221 1122 245676666666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=167.70 Aligned_cols=265 Identities=13% Similarity=0.024 Sum_probs=170.1
Q ss_pred CEEEEeCcccch--HHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-----HHHHhCCEecccCHHHHHHHHHH
Q 002955 201 DFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 201 D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-----~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
|+++||...... +..++++ .+.++.+.+|..-.....+.. ....++ ..+-.+|.|-..+....+.+...
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 161 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEK 161 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHh
Confidence 566666555443 3333333 368899998852111111110 011111 23446788877776444443221
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCcccccCHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~ 351 (863)
.| .. . .++|+|+|...+.. ....++.+ ..++.++++||+.+.||+.
T Consensus 162 ----~~---------------~~-~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 162 ----YG---------------RD-S--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ----cC---------------CC-C--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 11 11 1 67899999876532 01112222 3456788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+.++.. ++.|+++|... ...++.+.+.+ +++. .+-+.+.|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~~~---~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KAAA---DPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------HhCC---CCcEEEccccChHHHHHHHHh
Confidence 99999987632 34588888532 11223333221 1111 234566789999999999999
Q ss_pred ccceeecccc-cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHH
Q 002955 432 AECCLVTAVR-DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 432 ADv~vvtS~~-EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 509 (863)
||++++||.. ||||++++|||+| +.|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAY-------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHc-------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 9999999999999 5679999998887777 45888888776 9999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDL 545 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 545 (863)
+++.++. +....++.++++. .+++..-++++++.+
T Consensus 327 l~~~~~~-~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPEE-VSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9987643 3333444555554 488888777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=169.55 Aligned_cols=194 Identities=16% Similarity=0.191 Sum_probs=140.3
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCce
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI--FKGISLKLLAMEQLLSQ-NPSKRGKI 371 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 371 (863)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 367789999999877421 11 1223333 34566666666654 89999999999988665 344 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC-HHHHHHHHHhccceeecccccCCCcccee
Q 002955 372 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ-FYERIAYYVIAECCLVTAVRDGMNLIPYE 450 (863)
Q Consensus 372 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~E 450 (863)
.++.+|... .... . .. ...+.+.|.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~-------~~---------~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P-------DL---------PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c-------cC---------CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 01 11245667777 88999999999999999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Q 002955 451 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 527 (863)
Q Consensus 451 a~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 527 (863)
||+| +.|+|+|..+|..+.+. .|+++++.|++++|++|.++++.+ +++....++.++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999 56799999988888773 489999999999999999999754 344444555566
Q ss_pred hh-ccCCHHHHHHHHHHHHH
Q 002955 528 YV-STHDVAYWARSFLQDLE 546 (863)
Q Consensus 528 ~v-~~~~~~~W~~~~l~~l~ 546 (863)
++ ..+++...++++++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 65 45888888888876554
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=165.75 Aligned_cols=293 Identities=20% Similarity=0.197 Sum_probs=196.6
Q ss_pred CEEEEeCcccchHHHHHHhh---CCCCeEEEEEeCC-----CC-ChhHhhcCCC---h----------HHHHHHHHhCCE
Q 002955 201 DFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHSP-----FP-SSEIYRTLPI---R----------DELLRALLNADL 258 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~r~lp~---r----------~eil~~ll~~dl 258 (863)
|+|++||||+.|+|.++++. ...++..|+.|-= || ...-.-.||. . .-+--|+..||.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1222223441 1 123345666777
Q ss_pred ecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcC-----------CchHHHHHHH
Q 002955 259 IGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN-----------LPETEAKVAE 327 (863)
Q Consensus 259 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~-----------~~~~~~~~~~ 327 (863)
|.--++.|+..-... ..|-- -.| .+.+ +.-.+.-+=+|||.....+... .+........
T Consensus 212 vttVSptYa~Ei~t~---~~g~g---l~g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 212 VTTVSPTYAGEIYTP---EYGEG---LEG--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred EEEECHHHHHhhccc---ccccc---chh--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 777777777654410 00000 000 0111 1134445567777665532111 0012223344
Q ss_pred HHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 002955 328 LQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRIN 402 (863)
Q Consensus 328 l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN 402 (863)
|++.+ .+.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ -..+...+..++.++.
T Consensus 282 L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~~ 348 (487)
T COG0297 282 LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRHP 348 (487)
T ss_pred HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhcC
Confidence 55655 24589999999999999999999999999987 55 8888843 1467788888888886
Q ss_pred hccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc
Q 002955 403 KIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF 482 (863)
Q Consensus 403 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~ 482 (863)
.++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+.
T Consensus 349 ~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~t 400 (487)
T COG0297 349 GRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRET 400 (487)
T ss_pred ceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEccc
Confidence 543 2222345666678999999999999999999999999997 678999999
Q ss_pred ccCcccCC-----------CceEeCCCCHHHHHHHHHHHhCCCHH----HHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 483 VGCSPSLS-----------GAIRVNPWNIDAVAEAMDSALGVSDA----EKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 483 ~G~~~~l~-----------~al~VnP~d~~~~A~ai~~aL~m~~~----er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+|.++.+. .|+++.|.|.++++.||.+|+..-.. .+..+..+|. ...++..=++++..--+.
T Consensus 401 GGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 401 GGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKP 477 (487)
T ss_pred CCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHH
Confidence 99998873 27888888999999999999976322 2222222332 356666667766654444
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-14 Score=164.87 Aligned_cols=287 Identities=19% Similarity=0.184 Sum_probs=176.1
Q ss_pred HHHHHHhhcCCCCCEEEEeCcccchHHHHHHh-hCCCCeEEEEEeCCCC-ChhHhhcCCChHHHHHHHH-hCCEecccCH
Q 002955 188 FADKVMEVISPDDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFP-SSEIYRTLPIRDELLRALL-NADLIGFHTF 264 (863)
Q Consensus 188 fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~~r~lp~r~eil~~ll-~~dligF~t~ 264 (863)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44445677788 89999988765 555533 3346777776664332 22333322 22333333 4799998998
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecC
Q 002955 265 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDD 343 (863)
Q Consensus 265 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdr 343 (863)
...+.|.+ +|+. .. +.++|++ +.+.+. .+........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877764 2321 11 2344542 222111 111122344566666 67888999987
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhc---cCCCCcc----cEEEE
Q 002955 344 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKI---FGRPGYQ----PVVLI 416 (863)
Q Consensus 344 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~---~g~~~~~----pv~~~ 416 (863)
. .|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. +.. ..+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~-~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQ-GEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccC-CCCCCCCCcEEE
Confidence 5 5889999999999998899876 77766 34432 12333343333211 110 000 12333
Q ss_pred cCCCCHHHHHHHHHhccceee-cccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcc----cC-C
Q 002955 417 DTPLQFYERIAYYVIAECCLV-TAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP----SL-S 490 (863)
Q Consensus 417 ~~~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~----~l-~ 490 (863)
.+ +..|+..+|+.||++++ +|..||+|++++|||+| +.|+|++...|... .+ .
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~~~ 365 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERLLQ 365 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHHHH
Confidence 32 36799999999999666 68889999999999999 56688776544332 22 3
Q ss_pred CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 491 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 491 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
+|.++.|.|.+++|++|.++++.+ +.+....++.++++.++. .=.+..++.+.
T Consensus 366 ~g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 366 AGAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CCCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 577888999999999999999744 455556666777776652 23344444443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=164.77 Aligned_cols=239 Identities=11% Similarity=0.013 Sum_probs=154.5
Q ss_pred cCCCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEeCCCCChhHhhc-C---CC----hHHHHHHH-HhCCEecccCH
Q 002955 196 ISPDDDFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L---PI----RDELLRAL-LNADLIGFHTF 264 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~-l---p~----r~eil~~l-l~~dligF~t~ 264 (863)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 455 899999877532 344443444468899999975421 1110 0 00 01111121 23677766666
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCc
Q 002955 265 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM 344 (863)
Q Consensus 265 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 344 (863)
...+...+. .|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~---~----~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN--------------------WGIR--ATVLYDQP-PEFFRPASL---E----IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh--------------------cCCC--eEEECCCC-HHHcCcCCc---h----hccc--CCCcEEEEEeCce
Confidence 555443220 0111 56778884 455542210 0 0111 1235678899999
Q ss_pred ccccCHHHHHHHHHHHHH-----------------hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 345 DIFKGISLKLLAMEQLLS-----------------QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
.+.||+..+++|+..+.. ++|+ +.|+.+| +|++.+++++.+. +.
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~----~~------ 283 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKIS----RL------ 283 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHH----Hc------
Confidence 999999999999988752 3455 4488888 3454444544443 32
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeecc---cccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| +.|+|+|...|
T Consensus 284 -~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~gg 343 (371)
T PLN02275 284 -NLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYSC 343 (371)
T ss_pred -CCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCCC
Confidence 2334777787899999999999999999853 348999999999999 56799999888
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002955 485 CSPSLS---GAIRVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 485 ~~~~l~---~al~VnP~d~~~~A~ai~~aL 511 (863)
..+.+. .|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 887772 488986 6999999998875
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.8e-15 Score=146.73 Aligned_cols=143 Identities=20% Similarity=0.337 Sum_probs=111.0
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++....++ .++...+ .. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~----~~--~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYKKELK----NLIEKLN----LK--E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHHHHHH----HHHHHTT----CG--T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccccccc----ccccccc----cc--c
Confidence 6789999999999999999999999999875 66655 887772 22222333 3333322 11 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS- 490 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~- 490 (863)
.|. +.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+.
T Consensus 74 ~i~-~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NII-FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEE-EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccc-ccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 244 445677999999999999999999999999999999999 67899999888877772
Q ss_pred --CceEeCCCCHHHHHHHHHHHhCCC
Q 002955 491 --GAIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 491 --~al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999866
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=135.45 Aligned_cols=199 Identities=23% Similarity=0.258 Sum_probs=123.8
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CCceEEccCcEEEEeCCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~l~liaenGa~I~~~~~ 668 (863)
+.++||+|+||||++++ .+..|.. ..+.+| ++.|..|++||..+..++..+-..+ +.+++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999932 3444444 445555 6669999999999999998888776 568999999999987653
Q ss_pred eeEEeecC---------CCCc-cHHHHHHHHHHHHhhcCCCceeeec--cceeEeecccCCCCc-------------chh
Q 002955 669 VDWETCVS---------VPDF-SWKQIAEPVMKLYTETTDGSTIETK--ESALVWNFQYADPDF-------------GSC 723 (863)
Q Consensus 669 ~~w~~~~~---------~~~~-~w~~~v~~i~~~y~~~~~gs~ie~k--~~~l~~~y~~~d~~~-------------~~~ 723 (863)
|..... .... .-.+.+++.++...+...-.++.+- +....|. ...++. -.+
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~T--Glpre~aaLa~~rEyseti~~r 156 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWT--GLPREQAALAMLREYSETIIWR 156 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHh--CCChHHhHHHHHHHhhhheeec
Confidence 221100 0000 0112222222222221111111000 0000000 000000 001
Q ss_pred hHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 724 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
...+...++...|...++.++.|..+.-|......||.|+.++++.+...+. ..-+++.||+.||.+||+.....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~A 231 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDYA 231 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhhh
Confidence 1123445566777777899999999999999999999999999997744432 23599999999999999999863
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=146.28 Aligned_cols=267 Identities=14% Similarity=0.121 Sum_probs=165.7
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCC-hHHHHHHHHhCCEecccCHHHHHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDELLRALLNADLIGFHTFDYARHFLSCC 274 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~-r~eil~~ll~~dligF~t~~~~~~Fl~~~ 274 (863)
.+.++.++|.+.--...+... .+..++.+-+|--|+...... +. .......+-.||+|-..+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888875444443333 456788888876665332110 11 111223345689887777655543221
Q ss_pred HhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHH
Q 002955 275 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 354 (863)
Q Consensus 275 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 354 (863)
+ + .++.++|+|+|.+.|......+.. .+.+. ..++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246679999999999743221110 11111 14678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002955 355 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 434 (863)
Q Consensus 355 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 434 (863)
. .+.+.+|+++ |+.||... .. .+. .+ + . .. +-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~---~~--~~~-~~---~----~------~~-~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD---VS--IDP-SA---L----L------RL-PNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc---Cc--cCh-hH---h----c------cC-CCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678876 88888431 01 111 11 0 0 11 22455689999999999999999
Q ss_pred eeeccc-----ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHH
Q 002955 435 CLVTAV-----RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 435 ~vvtS~-----~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~ 509 (863)
+++|+. +.++++..+||||| |.|+|.|.+.++.+.. ++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~-------------------G~PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAA-------------------GKPVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhcc-------------------CCCEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHH
Confidence 999985 45788999999999 4568888766554333 3444456799999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+|..+..++..+. .+.+.+||+..=++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8765543333222 2267789988888888765543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.4e-13 Score=141.00 Aligned_cols=189 Identities=16% Similarity=0.161 Sum_probs=139.6
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHH
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~ 351 (863)
...|.+.+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-|.||++
T Consensus 145 ~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiD 211 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGID 211 (426)
T ss_pred CCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchH
Confidence 34556677777776543 3333334578899999999999753221 22 4558899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
+++..+.++-++||+.+ ++.+| +||....+++.+++. + -+.+| .+.|.++++++...|..
T Consensus 212 ll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV-~~lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 212 LLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRV-VMLGTVPHDRVRDVLVR 271 (426)
T ss_pred HHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCce-EEecccchHHHHHHHhc
Confidence 99999999999999988 88777 455433333333322 0 12344 45679999999999999
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCc-eEeCCCCHHHHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGA-IRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~a-l~VnP~d~~~~A~ai~~a 510 (863)
.|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+|
T Consensus 272 G~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 272 GDIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred CcEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHH
Confidence 99999999999999999999999 3456777777777777544 434555788888888888
Q ss_pred hCC
Q 002955 511 LGV 513 (863)
Q Consensus 511 L~m 513 (863)
++.
T Consensus 333 i~~ 335 (426)
T KOG1111|consen 333 ITK 335 (426)
T ss_pred HHH
Confidence 864
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-10 Score=132.71 Aligned_cols=191 Identities=14% Similarity=0.162 Sum_probs=122.2
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCce
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ----NPSKRGKI 371 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~----~p~~~~~v 371 (863)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 44556788876433211 1 123456666 4678999999999999999999999876522 24332
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceee
Q 002955 372 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEY 451 (863)
Q Consensus 372 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 451 (863)
++.++. +++ ++++++.+... + ..| .+.|.++ ++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333332210 0 123 3556664 7999999999999865 37899999
Q ss_pred eeeecCCcccccccCCCCCCCCCccEEecccc-----cCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002955 452 IICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-----GCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 525 (863)
Q Consensus 452 ~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 525 (863)
|+| +.|+|++... |.++.+ .++.-+.+.|+++++++|.++|...++.++.+.+..
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 5668888752 333434 333334468999999999999987455555556666
Q ss_pred hhhhccCCHHHHHHHHHH
Q 002955 526 YRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 526 ~~~v~~~~~~~W~~~~l~ 543 (863)
+++...+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777766766666655543
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-10 Score=117.46 Aligned_cols=111 Identities=16% Similarity=0.205 Sum_probs=80.9
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC
Q 002955 340 GVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419 (863)
Q Consensus 340 ~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~ 419 (863)
++||+.+.||+...++|+..+.+++|+++ ++.+|... ..+ ..+..+. +.+ ....|.++ +.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~---~~~--~~~~~~~--------~~~--~~~~v~~~-~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP---ERE--YLEELLA--------ALL--LLDRVIFL-GG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC---ChH--HHHHHHH--------hcC--CcccEEEe-CC
Confidence 89999999999999999999998888765 88888432 111 1111111 111 11234444 45
Q ss_pred C-CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 420 L-QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 420 v-~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
+ +.+++..+++.||+++.||..||++.+.+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566667777799999999999999999999999 5679999998877654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.7e-10 Score=124.70 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=138.8
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC-ceEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG-KIVLVQIANP-ARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~-~vvLvqi~~p-~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
..+...+.|+.+-||+...|.||.++...-|+..- ...++..+++ ..+...+..++..++.+++++.+- +..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l------~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL------LGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc------cCc
Confidence 67889999999999999999999999887765211 2334444433 333344445566677777766521 123
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
.+++..+.++.+.+.++..+.+..+++..|.||+|++|||+| +-|+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEcC
Confidence 567767888888888888888888999899999999999999 5679999999999998
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHh
Q 002955 490 SGAIRVNPWNID---AVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 490 ~~al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 551 (863)
..|++++| +.+ .+|++|.++.+.|.. +....++.++.|.+ +++ +.|.+.+.....+
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 35999999 666 599999999987655 66666778888877 554 5566655554443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.2e-10 Score=120.14 Aligned_cols=197 Identities=18% Similarity=0.255 Sum_probs=139.6
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHH-hCC--CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ-FKG--QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.+.+.|.|++...+... +.. ... +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56678999999887631 000 112 36899999999999999999999999887776 34776
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|..... ...+..++...+. .+.+.+.+.++.+++..+|+.||+++.||..||||++.+|||+|
T Consensus 236 ~g~~~~~--------~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER--------REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc--------HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 1222223333321 23344577888889999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCCC---ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-cc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 531 (863)
+.|+|+|...|..+.+.. |+++++.|.+++++++..+++++ +.++...+..++.+ ..
T Consensus 300 ------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 300 ------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred ------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 467899999988888843 77888888999999999999877 33333332233333 46
Q ss_pred CCHHHHHHHHHHHHHH
Q 002955 532 HDVAYWARSFLQDLER 547 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~ 547 (863)
+++..-++.+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7766666555554444
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-09 Score=119.40 Aligned_cols=257 Identities=16% Similarity=0.064 Sum_probs=154.7
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++++..+| |+|..|.....+. ..+..+..+.|+.++.|..+|.. -..++- -.+|.+-..+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 44555666 9999998655443 33445556788888777555431 011111 1244443222210 0
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.. ....++.++|+|++.+.+.. +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 --------------------~~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 --------------------PE--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred --------------------hc--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 00 12245778999999876542 111 0111 111467888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 351 SLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 351 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
..++ +|+.++.+. | .+++++|. ++. +++.+.+ + .+ .. | .+.+.+ ++...+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~----~-----~~---~~-v-~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAY----A-----AG---IN-A-EVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHh----h-----cC---Cc-E-EEeehH--hhHHHHH
Confidence 7776 888777432 2 33566663 221 2332221 1 11 12 3 344554 6899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--------cccC---CCceEeCCC
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--------SPSL---SGAIRVNPW 498 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--------~~~l---~~al~VnP~ 498 (863)
..||+++.+| | +.+.+|||+|+ .|+|++-..|. ++.+ ..|+++.|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g-------------------~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAG-------------------LPAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhC-------------------CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 57899999994 45666544321 2233 237888888
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 499 N--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 499 d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
| +++++++|.++++. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 4445555555677777787777777776654
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-08 Score=115.98 Aligned_cols=274 Identities=9% Similarity=0.072 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEec
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIG 260 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dlig 260 (863)
+...+..-..++++..+| |+|.+| +....++.+.+....++|+....+-..+... .+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~---------~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI---------WVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc---------cccC---CCCEEE
Confidence 333444445666777788 899885 6667788776666556676533321111110 0111 488887
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCch-HHHhhcCCchHHHHHHHHHHHh---CCCe
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIG-QLQSVLNLPETEAKVAELQDQF---KGQI 336 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 336 (863)
..+....+.+.+ .|+. ..++.++ |++.. .|... .. ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 776654444332 1321 1122222 33332 23211 11 12244554 2444
Q ss_pred -EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002955 337 -VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415 (863)
Q Consensus 337 -vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~ 415 (863)
+++..|++...||+...++++. +.|+++ ++.++.. ++ .+++++++++++.+ ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~----~~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLM----SVPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHh----hCCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEE
Confidence 5666789999999998888764 235554 7666531 11 23344444433221 23444
Q ss_pred EcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc-cccCc----ccC-
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCS----PSL- 489 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe-~~G~~----~~l- 489 (863)
+ |.+ +++..+|+.||++|. ++.|++++|||+| +.|+|++. ..|.. ..+
T Consensus 261 ~-g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~-------------------g~PvI~~~~~~g~~~~n~~~~~ 314 (380)
T PRK13609 261 F-GYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL-------------------GVPVILYKPVPGQEKENAMYFE 314 (380)
T ss_pred E-ech--hhHHHHHHhccEEEe----CCCchHHHHHHHh-------------------CCCEEECCCCCCcchHHHHHHH
Confidence 4 555 468899999999873 4558999999999 45677765 33321 112
Q ss_pred CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 490 SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 490 ~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
..|..+.+.|.++++++|.++++.+ +.+....++.+++...++....++.+++.+...
T Consensus 315 ~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 315 RKGAAVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred hCCcEEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 2344455689999999999999854 334444445566666788888888887766543
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-09 Score=118.24 Aligned_cols=249 Identities=15% Similarity=0.128 Sum_probs=145.0
Q ss_pred HHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHH
Q 002955 189 ADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 268 (863)
Q Consensus 189 a~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~ 268 (863)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . ..++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3355566677 8999986554 34444545555678876666555421 0 1111 1125666554443221
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 345 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 345 (863)
. + ...++.++|+|+|.+.+... + . ++++ +++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11355678999998766421 1 0 2332 4677888888887
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002955 346 IFKGISLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 424 (863)
Q Consensus 346 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~e 424 (863)
..|+...++ .|+..+. + ++ +.++.++. .+ +.+++++.+.++ + ..| .+.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~----~~v-~~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G----VNY-EVFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C----CCe-EEeehh--hh
Confidence 888877654 7776664 2 22 33333331 22 223444333221 1 113 344444 78
Q ss_pred HHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc--------CcccC---CCce
Q 002955 425 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG--------CSPSL---SGAI 493 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G--------~~~~l---~~al 493 (863)
+..+|+.||++|.+| | +.+++|||+|+ .|+|++...| .++.+ ..|+
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G-------------------~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALG-------------------LPAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhC-------------------CCEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 999999999999876 3 57899999993 4566665433 12333 2378
Q ss_pred EeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHH
Q 002955 494 RVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536 (863)
Q Consensus 494 ~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 536 (863)
+++|. |.++++++|.+++.. ++.++...++.++++..+...+
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 303 LIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 99887 899999999999964 4444544555666665554433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.1e-09 Score=117.51 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=144.9
Q ss_pred HHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEecccC
Q 002955 186 KIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHT 263 (863)
Q Consensus 186 ~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dligF~t 263 (863)
..|++. ++..+| |+|.+|......+...+-.+.-++|++..-+ -.-+.+.+. |+.+++.+-+. -||++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~-g~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEA-GLRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeC-CCCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 445543 345567 9999996545444444433444678864322 111111111 22233323222 267776677
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhC-C-CeEEEee
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK-G-QIVMLGV 341 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~vil~V 341 (863)
....+++++ +|+ ...+|.++++|+....+..... .....+++++. + ..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 777766654 132 1235677888863222221100 01233444552 2 3344445
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002955 342 DDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420 (863)
Q Consensus 342 drld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v 420 (863)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.. +. ...| .+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~~--~~~v-~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----GD--SKRV-HLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----CC--CCCE-EEECCC
Confidence 4643 45999999999999998888775 66554332 11 1221 22222 11 1234 455688
Q ss_pred CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC-CC-ceEeCC
Q 002955 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL-SG-AIRVNP 497 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l-~~-al~VnP 497 (863)
+..++..+|+.||+++.+| |.+..|||+| +.|+|++ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-------------------g~PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSL-------------------GKPVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-------------------CCCEEECCCCCCChHHHhcCceEEe-C
Confidence 9999999999999999888 4457999999 4557775 445544444 23 4566 6
Q ss_pred CCHHHHHHHHHHHhCCC
Q 002955 498 WNIDAVAEAMDSALGVS 514 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~ 514 (863)
.|+++++++|.++++.+
T Consensus 319 ~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 319 TDKENITKAAKRLLTDP 335 (365)
T ss_pred CCHHHHHHHHHHHHhCh
Confidence 89999999999999754
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-08 Score=112.03 Aligned_cols=252 Identities=15% Similarity=0.100 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeC--CCCChhHhhcCCCh--HHHHHHHHhCCEe
Q 002955 184 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PFPSSEIYRTLPIR--DELLRALLNADLI 259 (863)
Q Consensus 184 vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~r~lp~r--~eil~~ll~~dli 259 (863)
....+.+.+.+. +| |+|++|++....++..+..+..++|+....|- .|- +..|+. ...+.. .+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHH--Hhhhc
Confidence 344444545444 77 99999988777676666555557888765441 120 001111 111111 35655
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEecccc-CchHHHhhcCCchHHHHHHHHHHHh---CCC
Q 002955 260 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQF---KGQ 335 (863)
Q Consensus 260 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~ 335 (863)
-.-+....+++.+ .|+ ...+|.++|+++ |...+..... . ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 5445544444332 122 223455667764 5433321110 0 01111222 345
Q ss_pred eEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 336 IVMLGVDDMDI---FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 336 ~vil~Vdrld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+++.++|+.. .||+..+++|++++.++ + +.++..+.+ +....+++ .+.+.+. . .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~-----~~~~~l~~----~~~~~~~-----~-~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP-----RTRPRIRE----AGLEFLG-----H-HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-----ChHHHHHH----HHHhhcc-----C-CC
Confidence 67778999875 79999999999887543 2 335544322 22223333 3333321 0 11
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CC
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG 491 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~ 491 (863)
.+.+.+.....++..+|+.||++|.+|- | +..|+++| +.|+|++...+..+.+ ..
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-------------------g~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-------------------GVPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-------------------CCCEEeeCCCCccchhhhe
Confidence 2345556678899999999999999984 4 46899998 4557777655645444 44
Q ss_pred ceEeCC-CCHHHHHHHHHHHhCCCHH
Q 002955 492 AIRVNP-WNIDAVAEAMDSALGVSDA 516 (863)
Q Consensus 492 al~VnP-~d~~~~A~ai~~aL~m~~~ 516 (863)
|+.+.+ .|.++++++|.++++.+..
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchh
Confidence 444433 3799999999999986533
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=112.86 Aligned_cols=180 Identities=12% Similarity=0.082 Sum_probs=112.8
Q ss_pred EEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCceEEEEEec
Q 002955 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGISLK-LLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 301 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
.++|+|++...+... + . ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 0 0 1111 11 467789999998888987664 4788777542 232 333432
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
+++. ++++ +.+.+. +...++.+. .. ++..+|+.||++|.+| | +.+.+|||+|
T Consensus 218 ----~~~~-~~l~----~~~~~~-------~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 218 ----KNDL-EKVK----NVYQEL-------GIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ----cchH-HHHH----HHHhhC-------CceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 2221 2333 333222 122233333 22 7899999999999865 4 6899999999
Q ss_pred cccccccCCCCCCCCCccEEecccccCc-------ccC---CCceEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCS-------PSL---SGAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHY 526 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~ 526 (863)
+.|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++. ++.++...+..+
T Consensus 270 ---------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~ 333 (348)
T TIGR01133 270 ---------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAAR 333 (348)
T ss_pred ---------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 4567777665432 233 3488898876 99999999999964 445555566677
Q ss_pred hhhccCCHHHHHH
Q 002955 527 RYVSTHDVAYWAR 539 (863)
Q Consensus 527 ~~v~~~~~~~W~~ 539 (863)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 7777776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-09 Score=107.18 Aligned_cols=72 Identities=24% Similarity=0.213 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecCCH--hH-
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDT--AE- 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~d~--~e- 832 (863)
+|..+++.+++++ |++++.+++|||+.||++|++.+|.++ ++..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~~------------~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLSV------------AVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeE------------ecCCcCHHHHHhCCEEecCCCCCcH
Confidence 4899999999999 999999999999999999999999753 333222 356789988754 33
Q ss_pred HHHHHHHHHHhh
Q 002955 833 ILRMLLGLAEAS 844 (863)
Q Consensus 833 V~~~L~~L~~~~ 844 (863)
+.++++++....
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 889998887653
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.2e-08 Score=109.99 Aligned_cols=167 Identities=9% Similarity=0.053 Sum_probs=107.7
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+.++++.||+...||+..+++++ ++..|+++ ++.++. ..+ ++.+++.+ ..+ .. ..|
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~---~~~----~~--~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTA---KFK----SN--ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHH---Hhc----cC--CCe-
Confidence 34667899999999999999875 34456554 655552 122 22222222 121 11 123
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-----
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----- 489 (863)
.+.|.+ +++..+|+.||++|.. +.|++..|||+| +.|+|++...+..+..
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-------------------G~PvI~~~~~pgqe~~N~~~~ 313 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-------------------CIPMIFLNPAPGQELENALYF 313 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-------------------CCCEEECCCCCCcchhHHHHH
Confidence 344554 5799999999999863 458899999999 4557776533322211
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHh
Q 002955 490 -SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 490 -~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 551 (863)
..|.-+-+.|.++++++|.++++.+ +++....++.++....++....++.+++.+...++-
T Consensus 314 ~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 314 EEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred HhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 1222233569999999999999754 444555566677777788888888888777665543
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.5e-09 Score=108.75 Aligned_cols=123 Identities=23% Similarity=0.289 Sum_probs=88.0
Q ss_pred ccceeEecCCccccCCC----CCCCCCCHHHH---HHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEE
Q 002955 591 KNRAILLDYDGTIMVPG----SISTSPNAEAV---AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV 663 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~----~~~~~~s~~~~---~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I 663 (863)
.+|+|++|+||||++.. .....++..+. .+++.| ++.|+.++|+|||+...+..++..+ ++. .
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~-----~- 89 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GIT-----H- 89 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCc-----e-
Confidence 58999999999999731 11333333333 678887 6789999999999988888777532 110 0
Q ss_pred EeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEE
Q 002955 664 RPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 743 (863)
Q Consensus 664 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 743 (863)
+ |. |
T Consensus 90 -------~---------------------f~----g-------------------------------------------- 93 (183)
T PRK09484 90 -------L---------------------YQ----G-------------------------------------------- 93 (183)
T ss_pred -------e---------------------ec----C--------------------------------------------
Confidence 0 00 0
Q ss_pred EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----
Q 002955 744 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---- 819 (863)
Q Consensus 744 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 819 (863)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.. +.++..
T Consensus 94 ------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~~ 144 (183)
T PRK09484 94 ------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPLL 144 (183)
T ss_pred ------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHHH
Confidence 012668899999999 99999999999999999999999974 234442
Q ss_pred ccccceecC
Q 002955 820 PSKAKYYLD 828 (863)
Q Consensus 820 ~s~A~y~l~ 828 (863)
...|+|++.
T Consensus 145 ~~~a~~v~~ 153 (183)
T PRK09484 145 LPRADYVTR 153 (183)
T ss_pred HHhCCEEec
Confidence 356788885
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.1e-08 Score=113.58 Aligned_cols=181 Identities=12% Similarity=0.130 Sum_probs=119.8
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
+..++..|.|+...||..+.+.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++- .|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~~--~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKRP--EFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhcc--cCC--C--
Confidence 45688999999999999999999999986 55652 466777775432211 1133455555554420 021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceee-ccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLV-TAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
.|+++. ..+..--..+|.+||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGEG 517 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCccccc
Confidence 366655 3455555588999999999 777 89999988887773 556777777765554
Q ss_pred ---CCceEeCC------------CCHHHHHHHHHHHh-C----C-----CHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 490 ---SGAIRVNP------------WNIDAVAEAMDSAL-G----V-----SDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 490 ---~~al~VnP------------~d~~~~A~ai~~aL-~----m-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
.+|..+.+ .|.+++-++|.+++ . . |..-.+.+.+.|......+++.+-++++...
T Consensus 518 ~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 518 YDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 34788875 89999999998877 2 1 1122333333344444458888888777653
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.1e-08 Score=99.84 Aligned_cols=192 Identities=18% Similarity=0.271 Sum_probs=126.4
Q ss_pred HHHHHHhhcCCCCeEEEEcCCChhhHHHHhh-c-c--CCceEEccCcEEEEeCCceeEEeecCCC--CccHHHHHHHHHH
Q 002955 618 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFS-S-C--EGLGIAAEHGYFVRPNYGVDWETCVSVP--DFSWKQIAEPVMK 691 (863)
Q Consensus 618 ~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~-~-l--~~l~liaenGa~I~~~~~~~w~~~~~~~--~~~w~~~v~~i~~ 691 (863)
.+.|.+| . +.+.|.|+||-....+++-+. . + ....+.++||...+..+...|...+... +...++.+.-++.
T Consensus 2 ~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 3 379999999999998888773 2 2 2246789999999999988887653111 1122333333333
Q ss_pred HHhh----cCCCceeeeccceeEeec--ccCCC----Ccc----hh-hHHHHHHHHHHHhcCCCeEE-EECCcEEEEecC
Q 002955 692 LYTE----TTDGSTIETKESALVWNF--QYADP----DFG----SC-QAKELLDHLESVLANEPVSV-KSGPNIVEVKPQ 755 (863)
Q Consensus 692 ~y~~----~~~gs~ie~k~~~l~~~y--~~~d~----~~~----~~-~a~el~~~L~~~l~~~~~~v-~~g~~~vEI~p~ 755 (863)
+..+ ...|.+||.+...+.+.- +++.. .|. .. .-+.+.+.|++.+++..+.+ ..|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3332 235999999998887742 33311 111 01 12346778888888877654 567899999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHh
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~ 831 (863)
|++|..++++|.+. ..++++.||| +.||.++|...+. .+.+ |.+++
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2799999999 7999999987653 3333 56788
Q ss_pred HHHHHHHHHH
Q 002955 832 EILRMLLGLA 841 (863)
Q Consensus 832 eV~~~L~~L~ 841 (863)
+.++.|++|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888875
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-07 Score=104.17 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecC--CHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--d~~ 831 (863)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ |++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg--------------iA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG--------------IAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe--------------EEeCCCHHHHhhCCEEecCcCHH
Confidence 47999999999999 99999999999999999999999974 444333 478999986 567
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7777664
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.6e-08 Score=95.05 Aligned_cols=199 Identities=19% Similarity=0.237 Sum_probs=135.3
Q ss_pred HHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc-c-CC-ceEEccCcEE
Q 002955 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C-EG-LGIAAEHGYF 662 (863)
Q Consensus 586 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-l-~~-l~liaenGa~ 662 (863)
++++...-|+.||.||||++ ....+++++.+.|++| + +.+.+.++-|-..+.+.+-++. + .. ....+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45667677999999999999 7889999999999998 3 4789999999988877777643 1 22 2455899988
Q ss_pred EEeCCceeEEeec-CC-CCccHHHHHHHHHHHHhh----cCCCceeeeccceeEeec--ccCCCC----c-----chhhH
Q 002955 663 VRPNYGVDWETCV-SV-PDFSWKQIAEPVMKLYTE----TTDGSTIETKESALVWNF--QYADPD----F-----GSCQA 725 (863)
Q Consensus 663 I~~~~~~~w~~~~-~~-~~~~w~~~v~~i~~~y~~----~~~gs~ie~k~~~l~~~y--~~~d~~----~-----~~~~a 725 (863)
-+..+...-.+.+ .. .+..+++.+.-++.+..+ ...|.++|-+...+.+.- |++..+ | ....-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 7776653211111 00 011223333333444333 234899998876665431 333211 1 11223
Q ss_pred HHHHHHHHHHhcCCCeEE-EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHH
Q 002955 726 KELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEV 795 (863)
Q Consensus 726 ~el~~~L~~~l~~~~~~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ 795 (863)
..+.+.|++.+++.++.. +.|+-.++|.|.|++|-..++++-+. ..+.+-.||| +.||.+.|..
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 456788888888887655 55778999999999999999888654 2688999999 7899888754
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.78 E-value=7e-09 Score=99.29 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=88.5
Q ss_pred CeEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 335 QIVMLGVDDMDIFKGISLKLL-AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
..++++.|++...||+..+++ |++++.+++|+++ |+.+|... + + +.++ + ...|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~----~-------~~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL----R-------RPNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH----H-------HCTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh----c-------CCCE
Confidence 357899999999999999999 9999999999755 88888522 2 1 2111 0 0124
Q ss_pred EEEcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
. +.+.+ +|+.++|+.||+++.|+. .++++...+|||++ |.|+|+|.. |+....
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 3 44556 689999999999999984 78999999999999 566888888 656555
Q ss_pred CCceEeCCCCHHHHHHHHHHHhC
Q 002955 490 SGAIRVNPWNIDAVAEAMDSALG 512 (863)
Q Consensus 490 ~~al~VnP~d~~~~A~ai~~aL~ 512 (863)
..++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 236666 8899999999999875
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.1e-07 Score=103.07 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=86.8
Q ss_pred CCeE-EEe-ecCcccccC-HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIV-MLG-VDDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~v-il~-Vdrld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++. .++..+++ .+++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~----~~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQI----EEALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHH----HHHHhhc----C--CC
Confidence 4444 333 347766544 6788999999988888765 666652 11222223 3332221 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec----------
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 480 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS---------- 480 (863)
.+.++. .++..+|+.||++|.+| |.+.+|+|+| +.|+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-------------------G~PvI~~~~~~~~~~~~ 296 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-------------------KVPMVVGYKVSPLTFWI 296 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-------------------CCCEEEEEccCHHHHHH
Confidence 133433 37899999999999998 6788899999 4456665
Q ss_pred -------ccccCcccCCC-----ceEeCCCCHHHHHHHHHHHhCCC
Q 002955 481 -------EFVGCSPSLSG-----AIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 481 -------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.+.|..+.+.+ +++++..|.+++++++.++|+.+
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 297 AKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred HHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 34454555532 36678889999999999999865
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.9e-08 Score=94.12 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=45.8
Q ss_pred eeEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 594 AILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 594 lI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 589999999998431 1137789999999998 667999999999999999998864
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.9e-08 Score=96.46 Aligned_cols=142 Identities=18% Similarity=0.119 Sum_probs=97.2
Q ss_pred cceeEecCCccccCCC---CC----CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEE
Q 002955 592 NRAILLDYDGTIMVPG---SI----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVR 664 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~---~~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~ 664 (863)
+|+++||+||||++.+ .. .+..+.+-..+++.| ++.|+.++|+|+.+...+...+..+ ++.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~-------- 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK-------- 74 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc--------
Confidence 7999999999999731 01 123456667788887 7778999999998888777776432 110
Q ss_pred eCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEE
Q 002955 665 PNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVK 744 (863)
Q Consensus 665 ~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~ 744 (863)
.|.. .
T Consensus 75 -----~~f~------------------------------------------~---------------------------- 79 (169)
T TIGR02726 75 -----RFHE------------------------------------------G---------------------------- 79 (169)
T ss_pred -----EEEe------------------------------------------c----------------------------
Confidence 0000 0
Q ss_pred ECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccc
Q 002955 745 SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 824 (863)
Q Consensus 745 ~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~ 824 (863)
+. .|...++.+++++ |++++++++|||+.||++|++.+|.++++.++.+ ..+..|+
T Consensus 80 -------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~----------~lk~~A~ 135 (169)
T TIGR02726 80 -------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVA----------DVKEAAA 135 (169)
T ss_pred -------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCeEECcCchH----------HHHHhCC
Confidence 01 3677889999998 9999999999999999999999998643322111 1357789
Q ss_pred eecCC--HhH-HHHHHHHHHHhh
Q 002955 825 YYLDD--TAE-ILRMLLGLAEAS 844 (863)
Q Consensus 825 y~l~d--~~e-V~~~L~~L~~~~ 844 (863)
|++.+ .++ +.++++.+....
T Consensus 136 ~I~~~~~~~g~v~e~~e~il~~~ 158 (169)
T TIGR02726 136 YVTTARGGHGAVREVAELILKAQ 158 (169)
T ss_pred EEcCCCCCCCHHHHHHHHHHHhc
Confidence 98742 333 566666666543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-06 Score=98.30 Aligned_cols=237 Identities=13% Similarity=0.044 Sum_probs=132.7
Q ss_pred HHhhcCCCCCEEEEeCcccch--HHH-HHHh-hCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMV--LPT-FLRK-RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+...++| +|+|.+|-.-+.. ++. ++++ +..++|+.+++|.=||..-.. .-.........+-.||.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 4455677 4999998643321 222 2222 112699999999877642110 00012233445556899999888766
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 347 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 347 (863)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 55543 1221 01122233322221000 0 0111345689999999843
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
.++. +..|+++ |+++|.. ++.. . . .+-+.+.|.++.+|+..
T Consensus 182 ~~l~----------~~~~~~~----l~i~G~g-----~~~~-----------~--------~-~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGIK----LTVFGPN-----PEDL-----------E--------N-SANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCCe----EEEECCC-----cccc-----------c--------c-CCCeEEecCCCHHHHHH
Confidence 3211 1345544 7777732 2111 0 0 12245678999999999
Q ss_pred HHHhccceeecccc-----------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---Cce
Q 002955 428 YYVIAECCLVTAVR-----------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI 493 (863)
Q Consensus 428 ly~~ADv~vvtS~~-----------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al 493 (863)
+|+. |+.+++.-. -.++--..||||| |.|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 666554311 1233336778999 56799999988888882 388
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh
Q 002955 494 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY 528 (863)
Q Consensus 494 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 528 (863)
.|+ +.++++++|... ++++++...++.++.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~ 312 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKI 312 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 887 688999999873 345544444444433
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-06 Score=101.05 Aligned_cols=256 Identities=15% Similarity=0.112 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHhh----cCCCCCEEE--EeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCC--hHHHHH
Q 002955 180 AYVSVNKIFADKVMEV----ISPDDDFVW--VHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI--RDELLR 251 (863)
Q Consensus 180 ~Y~~vN~~fa~~i~~~----~~p~~D~Vw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~--r~eil~ 251 (863)
.|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+.
T Consensus 202 ~f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~ 268 (519)
T TIGR03713 202 EYSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYE 268 (519)
T ss_pred EECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhh
Confidence 3444555555554433 33 458877 77777766 4444554455556665 111 22 245666
Q ss_pred HHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHH
Q 002955 252 ALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ 331 (863)
Q Consensus 252 ~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~ 331 (863)
.+-.+|.|-.-|.+-.+...... +- .. ....|..+|++.-...+ ...++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~----~~------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r 317 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENY----RE------------NY-VEFDISRITPFDTRLRL--------------GQSQQ 317 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHh----hh------------cc-cCCcceeeCccceEEec--------------Chhhc
Confidence 77777877665654333222110 00 00 11233345554331100 11233
Q ss_pred hCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc-
Q 002955 332 FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY- 410 (863)
Q Consensus 332 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~- 410 (863)
..++.|.+++||+ +.|-+...++|+.++++++|+.. |...|.. .. .+....+.++++++|..++....
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~ 386 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNF 386 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhc
Confidence 3567788888899 99999999999999999999977 7766632 11 23456666777777766432110
Q ss_pred ------------------c---cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCC
Q 002955 411 ------------------Q---PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 469 (863)
Q Consensus 411 ------------------~---pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~ 469 (863)
. ..+.+.+..+..++.+.|..|.++|.+|..|||+ +.+|||+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~--------------- 450 (519)
T TIGR03713 387 FSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA--------------- 450 (519)
T ss_pred cccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc---------------
Confidence 0 2566777778889999999999999999999999 99999997
Q ss_pred CCCCCccEEecccccCcccC---CCceEeCCCCHHHHHHHHHHHhCCCH
Q 002955 470 STAKSSMLVVSEFVGCSPSL---SGAIRVNPWNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 470 ~~~~~g~lVlSe~~G~~~~l---~~al~VnP~d~~~~A~ai~~aL~m~~ 515 (863)
|-|.| .-|.++.+ .+|.+| .|+.++++||...|+.+.
T Consensus 451 ----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 ----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 33444 55667666 358999 699999999999998653
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=93.66 Aligned_cols=311 Identities=15% Similarity=0.245 Sum_probs=181.4
Q ss_pred hhHHHHHHHHHHHHHHHHh---hc--CCCCCEEEEe--CcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHH
Q 002955 176 SLWQAYVSVNKIFADKVME---VI--SPDDDFVWVH--DYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 248 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~---~~--~p~~D~Vwvh--Dyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~e 248 (863)
..|..+.-.-|..+.-|+. .+ .| =|||- .|-+. .|.+ |. +.+.|+|-+.|-|--|.+....+-.|++
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~P---di~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPP---DIFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCc---hheEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhh
Confidence 3455555555555544432 12 24 26764 45443 2333 22 5689999999988777776654433322
Q ss_pred HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceec------c-cCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchH
Q 002955 249 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQ------S-KRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPET 321 (863)
Q Consensus 249 il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~------~-~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 321 (863)
= .+...---.|-|-|..--+ ..|--.+ + .+.+|.--+..+++.+ |+|+. +++.+++...+
T Consensus 198 s-------~~l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t--- 264 (465)
T KOG1387|consen 198 S-------GILVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT--- 264 (465)
T ss_pred c-------chhhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc---
Confidence 1 1221222345555542211 1121100 0 0112211233333333 44533 33333322111
Q ss_pred HHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCceEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 002955 322 EAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPS--KRGKIVLVQIANPARGRGRDVQEVQSETHATVR 399 (863)
Q Consensus 322 ~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~ 399 (863)
.-+....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++|. .|++ +-++.-+.++.+++
T Consensus 265 ---------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne--eD~ervk~Lkd~a~ 331 (465)
T KOG1387|consen 265 ---------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE--EDEERVKSLKDLAE 331 (465)
T ss_pred ---------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh--hhHHHHHHHHHHHH
Confidence 012356899999999999999 67777778888887 334677887773 3443 32344455666666
Q ss_pred HHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe
Q 002955 400 RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479 (863)
Q Consensus 400 ~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl 479 (863)
+++-. .-+.+.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++ .+.+
T Consensus 332 ~L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG--------------------lIpi 384 (465)
T KOG1387|consen 332 ELKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG--------------------LIPI 384 (465)
T ss_pred hcCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC--------------------ceEE
Confidence 66422 12345568999999999999999999999999999999999983 2333
Q ss_pred cccccCcc--cC---C---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 480 SEFVGCSP--SL---S---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 480 Se~~G~~~--~l---~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+..+|... .+ . .|++. | +.++-|++|.+++++..+||....+..+..+.++.-....+.|...+..
T Consensus 385 ~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 385 VHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred EeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 33333111 11 1 25554 3 5678999999999999998777666677767666666666666544433
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.3e-06 Score=93.88 Aligned_cols=59 Identities=17% Similarity=0.326 Sum_probs=46.3
Q ss_pred cceeEecCCccccCCCCCCC---CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCce
Q 002955 592 NRAILLDYDGTIMVPGSIST---SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLG 654 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~---~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~ 654 (863)
+|+|+||+||||+. .+. .+.+.+.++|++| ++.|..++++|||+......+...+..++
T Consensus 1 ~k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g 62 (257)
T TIGR01458 1 VKGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQDLLERLQRLG 62 (257)
T ss_pred CCEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHHcC
Confidence 47999999999998 333 3788999999998 88899999999988876555544433333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-07 Score=90.50 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecC---CHhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLD---DTAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~---d~~e 832 (863)
+|-.+.+.|++++ ++.+++|.++|||.||+++|+.+|.++| ++-+. .+.+|.|++. ....
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls~a------------~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLSVA------------VADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCccc------------ccccCHHHHHhhHhhhhccCcchH
Confidence 4777889999999 9999999999999999999999998643 32222 3577888875 2344
Q ss_pred HHHHHHHHHHh
Q 002955 833 ILRMLLGLAEA 843 (863)
Q Consensus 833 V~~~L~~L~~~ 843 (863)
|.++.+-+...
T Consensus 148 vREv~dlil~a 158 (170)
T COG1778 148 VREVCDLILQA 158 (170)
T ss_pred HHHHHHHHHHc
Confidence 55555554443
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.6e-05 Score=96.50 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=116.8
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+|.++.|+...||..+++..+++|.+ .+|+ ..+.+|..|...-.+. .-.++.+.+.++++.- +|. + .|+
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~p--~~~--~--kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRRP--EFR--G--RIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhCc--CCC--C--cEE
Confidence 78899999999999999999999865 3444 2477777774331111 1123444444444310 221 1 466
Q ss_pred EEcCCCCHHHHHHHHHhccceeeccc--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
++. ..+..--..++..||+++.||. .|.-|+.-+-|+. .|+|-+|..-|...+-
T Consensus 551 fle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~~g 609 (778)
T cd04299 551 FLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGYDG 609 (778)
T ss_pred EEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCccccccCC
Confidence 665 3555555689999999999999 8888887766666 3778888888876665
Q ss_pred CCceEeCC------------CCHHHHHHHHHHHhC----------CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 490 SGAIRVNP------------WNIDAVAEAMDSALG----------VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 490 ~~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
.+|..+.+ .|.+++-+.|.+.+- .|..-.+.+.+.+......+++.+-++.++..+..
T Consensus 610 ~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 610 ENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 24777777 455566666654443 13233333333344445568888888888877763
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.7e-07 Score=95.53 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=45.0
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~l 650 (863)
+|+|+||+||||+. .+..++ .+.++|++| ++.|+.|+++|| |+...+.+.+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 37899999999998 444444 789999998 889999999995 8888888877654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.4e-06 Score=88.41 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=50.2
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+|+|+||+||||+. .+ .+.+.+.++|++| ++.|..++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 33 7889999999999 888999999999999888777776655555
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-06 Score=93.79 Aligned_cols=59 Identities=20% Similarity=0.335 Sum_probs=44.7
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+++|+||+||||+. .. .+.+.+.++|++| ++.|..|+++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 58999999999998 33 3455599999998 888999999999886655555444433443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.7e-07 Score=89.60 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=45.4
Q ss_pred eeEecCCccccCCCCCC-----------CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH---HHhhc
Q 002955 594 AILLDYDGTIMVPGSIS-----------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA---EWFSS 649 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~---~~~~~ 649 (863)
++++|+||||+. ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 44 57899999999998 8899999999999988774 67755
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.9e-06 Score=91.74 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
.|..++.++++++ +++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999873 467777742 246899999999
Q ss_pred HHHHHHHHHH
Q 002955 832 EILRMLLGLA 841 (863)
Q Consensus 832 eV~~~L~~L~ 841 (863)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.5e-05 Score=86.45 Aligned_cols=309 Identities=15% Similarity=0.222 Sum_probs=145.1
Q ss_pred EEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC-------ChhHhhcCCC--hHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 202 FVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP-------SSEIYRTLPI--RDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 202 ~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~~r~lp~--r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
+.+.|.|..-+-..+||++.|.+.-.|+.|.--+ ..++|..|+. .++...- -.-+.+|.++
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iE 215 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIE 215 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHH
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHH
Confidence 5677888877777889999999999999995332 1223333331 1111100 0012445544
Q ss_pred HHHhhhCceecccCceee---EEEcCeEEEEEEeccccCchHHHhhcC----CchHHHHHHHH-HHHh-------CCCe-
Q 002955 273 CCSRMLGVSYQSKRGYIG---LEYFGRTVSIKILPVGIHIGQLQSVLN----LPETEAKVAEL-QDQF-------KGQI- 336 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~---~~~~gr~~~i~v~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~~~- 336 (863)
.+.....--...-.++.+ -..-+|..-| |.|+|++...|...-. .....+++.++ +..+ .++.
T Consensus 216 raaA~~AdvFTTVSeITa~Ea~~LL~r~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl 294 (633)
T PF05693_consen 216 RAAAHYADVFTTVSEITAKEAEHLLKRKPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTL 294 (633)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHHSS--SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEE
T ss_pred HHHHHhcCeeeehhhhHHHHHHHHhCCCCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceE
Confidence 332211100000000000 0012333222 5799999887653210 00122333433 2232 1344
Q ss_pred EEEeecCcc-cccCHHHHHHHHHHHH---HhCCCCCCceEEEEEecCCCCCchh---------HHHHHHHHHHHHHHHhh
Q 002955 337 VMLGVDDMD-IFKGISLKLLAMEQLL---SQNPSKRGKIVLVQIANPARGRGRD---------VQEVQSETHATVRRINK 403 (863)
Q Consensus 337 vil~Vdrld-~~KGi~~~l~A~~~ll---~~~p~~~~~vvLvqi~~p~r~~~~~---------~~~~~~~v~~l~~~IN~ 403 (863)
++...||.+ ..||++..|.|+.+|- +.... +.-|+..|-.|+....-. +.++++.+.++.++|..
T Consensus 295 ~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~ 372 (633)
T PF05693_consen 295 YFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGK 372 (633)
T ss_dssp EEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 455589999 5799999999998873 32221 233333344455443211 12222223322222211
Q ss_pred cc------CC---------------------------------------------------------CCcccEEEEcCCC
Q 002955 404 IF------GR---------------------------------------------------------PGYQPVVLIDTPL 420 (863)
Q Consensus 404 ~~------g~---------------------------------------------------------~~~~pv~~~~~~v 420 (863)
+. |. .+-..|+|....+
T Consensus 373 ~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL 452 (633)
T PF05693_consen 373 RLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYL 452 (633)
T ss_dssp HHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S--
T ss_pred HHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccc
Confidence 10 00 1233556554333
Q ss_pred C------HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-----
Q 002955 421 Q------FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----- 489 (863)
Q Consensus 421 ~------~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----- 489 (863)
+ .-++..+.+.+|++|+||.+|+.|.+|+|++|. +.|-|.|..+|....+
T Consensus 453 ~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~ 513 (633)
T PF05693_consen 453 SGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIE 513 (633)
T ss_dssp -TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-
T ss_pred cCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhc
Confidence 2 336778899999999999999999999999998 5678999999966433
Q ss_pred ---CCceE-eCC--CC----HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 490 ---SGAIR-VNP--WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 490 ---~~al~-VnP--~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
..|+. |+= .| ++++|+.|.....++..+|.....+..+.-..-+|.+-...+.
T Consensus 514 ~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~ 576 (633)
T PF05693_consen 514 DPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE 576 (633)
T ss_dssp HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH
T ss_pred cCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 13554 432 23 3567777777778887776655555444444455555444333
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.6e-06 Score=88.50 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=39.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
-.+-+|..+++.+++.+ |+++++++++|||.||++||+.+|..
T Consensus 140 ~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 140 CDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred cCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 34567999999999999 99999999999999999999999973
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.1e-07 Score=94.73 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
-|...++++++++ |.+++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 4688999999999 99999999999999999999999973 467777742 235889999999
Q ss_pred HHHHHHHH
Q 002955 832 EILRMLLG 839 (863)
Q Consensus 832 eV~~~L~~ 839 (863)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99887754
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.3e-06 Score=91.44 Aligned_cols=67 Identities=24% Similarity=0.253 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
+...+..+++.+ |.+++++++|||+.+|+.|.+++|. ..++|++|.. ...|++++++..+
T Consensus 147 ~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g~~~~~~l~~~~~d~vi~~~~e 212 (220)
T COG0546 147 DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWGYNSREELAQAGADVVIDSLAE 212 (220)
T ss_pred CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECCCCCCcchhhcCCCEEECCHHH
Confidence 567788888988 8888899999999999999999994 2478999852 3669999999999
Q ss_pred HHHHHHH
Q 002955 833 ILRMLLG 839 (863)
Q Consensus 833 V~~~L~~ 839 (863)
+...|..
T Consensus 213 l~~~l~~ 219 (220)
T COG0546 213 LLALLAE 219 (220)
T ss_pred HHHHHhc
Confidence 9887753
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.2e-05 Score=86.65 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=48.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
++++|+||+||||+. .+ .+-+.+.++|++| ++.|..|+++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 478999999999998 34 4568889999998 888999999999997776666655444444
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.2e-06 Score=85.58 Aligned_cols=62 Identities=23% Similarity=0.347 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCC--HhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDD--TAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d--~~e 832 (863)
.|+..++.+++++ +++++++++|||+.+|++|++.+|.. +.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 99999999999999999999999873 334432 3678898764 455
Q ss_pred HHHH
Q 002955 833 ILRM 836 (863)
Q Consensus 833 V~~~ 836 (863)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.1e-06 Score=90.54 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--c-----cccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P-----SKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~A~y~l~d~~ 831 (863)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. + ..|+|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 567788999999 99999999999999999999999973 467888752 1 34889999999
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=4e-06 Score=90.81 Aligned_cols=71 Identities=21% Similarity=0.226 Sum_probs=57.3
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 827 (863)
+.+-.|...++.+++++ |++++++++|||+.+|+.|.+.+|.. +++|..|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 33444678899999999 99999999999999999999999873 367777731 24688999
Q ss_pred CCHhHHHHHHH
Q 002955 828 DDTAEILRMLL 838 (863)
Q Consensus 828 ~d~~eV~~~L~ 838 (863)
++..++.+++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999886655
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.8e-06 Score=87.94 Aligned_cols=66 Identities=24% Similarity=0.296 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
|..+++.+++++ +++++++++|||+.+|+.+.+.+|.. ++.|.+|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 578899999999 99999999999999999999999873 356666642 2458899999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+...|.
T Consensus 217 l~~~l~ 222 (226)
T PRK13222 217 LLPLLG 222 (226)
T ss_pred HHHHHH
Confidence 888764
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.5e-06 Score=82.67 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=36.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 796 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 796 (863)
.+.+.+|+.+++.+++.+ |++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366789999999999887 89999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00018 Score=82.05 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=82.9
Q ss_pred CCeEE--EeecCccc-ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIVM--LGVDDMDI-FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~vi--l~Vdrld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
++++| ++.+|..+ .|++...++|++.+.+++|+++ ++.++.+. .. ...++++... ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHH----hCC-CC
Confidence 45544 44569887 7999999999999999999876 54443221 11 1122222222 221 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec----------
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 480 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS---------- 480 (863)
.|.++.+ +...+|++||++|.+| |.+.+|+++|+.| .|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 3444433 3457999999999999 6667799999554 3443
Q ss_pred -------ccccCcccCCC--c---eEeCCCCHHHHHHHHHHHhCCC
Q 002955 481 -------EFVGCSPSLSG--A---IRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 481 -------e~~G~~~~l~~--a---l~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.+.+.+..+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 14444444422 1 1223356889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.3e-05 Score=80.35 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|..
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~~ 185 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADIS 185 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCCe
Confidence 5999999999988 99999999999999999999999974
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0013 Score=73.32 Aligned_cols=299 Identities=21% Similarity=0.290 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCEEEEeCcc----cchHHH--HHHhhCCCCeEEEEEeCC---------CCChhHhhcCCCh
Q 002955 182 VSVNKIFADKVMEVISPDDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYRTLPIR 246 (863)
Q Consensus 182 ~~vN~~fa~~i~~~~~p~~D~VwvhDyh----l~llp~--~lr~~~~~~~i~~flH~P---------fP~~e~~r~lp~r 246 (863)
.+.+++|+ .......|++..||+|-=- ...+|- -||+++|+.++..+.-+| |++.-...-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 46777777 1223345667899998554 344444 489999999999988665 2222222233422
Q ss_pred HH-HHHHHH---hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE---------------------EEE
Q 002955 247 DE-LLRALL---NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV---------------------SIK 301 (863)
Q Consensus 247 ~e-il~~ll---~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~---------------------~i~ 301 (863)
.. ..+..| ..|+.-|---+.=-|++..|.+. |+. .+-.++|-. ...
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 11 122222 33444444334434444444322 111 011112110 111
Q ss_pred EeccccCchHHHhhc---------------CCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHH-HHHHHHHHHHHhC
Q 002955 302 ILPVGIHIGQLQSVL---------------NLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGIS-LKLLAMEQLLSQN 364 (863)
Q Consensus 302 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~-~~l~A~~~ll~~~ 364 (863)
+.-.-.|.++|.+.- ..|........+|.++++ +++++..+. ..|=. -.+.++..+++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhC
Confidence 112223333333211 123445567778888877 889988887 33444 4678999999999
Q ss_pred CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCC-------CcccEEEEcCCCCHHHHHHHHHhccceee
Q 002955 365 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP-------GYQPVVLIDTPLQFYERIAYYVIAECCLV 437 (863)
Q Consensus 365 p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~-------~~~pv~~~~~~v~~~el~aly~~ADv~vv 437 (863)
|+.. |+ ++ | +.+ |=-+.+++++++.|-+|+.- ..++|++.+ +.-|+..||++||+++|
T Consensus 259 ~~~l----lI-lV-P---RHp---ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFV 323 (419)
T COG1519 259 PNLL----LI-LV-P---RHP---ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFV 323 (419)
T ss_pred CCce----EE-Ee-c---CCh---hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEE
Confidence 9864 33 33 3 233 34567778888887666431 223455544 47799999999999877
Q ss_pred ccc---ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCcccC---CCceEeCCCCHHHHHHHH
Q 002955 438 TAV---RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCSPSL---SGAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 438 tS~---~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~~~l---~~al~VnP~d~~~~A~ai 507 (863)
--. .-|-| ++|..+|. .|+|. ..|.-+.+.+ .+++.|+. .+.+++++
T Consensus 324 GGSlv~~GGHN--~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v 380 (419)
T COG1519 324 GGSLVPIGGHN--PLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAV 380 (419)
T ss_pred CCcccCCCCCC--hhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHH
Confidence 543 34555 67999983 34554 3344444444 34677764 88888888
Q ss_pred HHHhCCCHHHHHHHHHHHhhhhccC
Q 002955 508 DSALGVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v~~~ 532 (863)
...++. +++|+.+.++....+..+
T Consensus 381 ~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 381 ELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 888765 667777667777666554
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.6e-05 Score=80.06 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------cccccee
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------PSKAKYY 826 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------~s~A~y~ 826 (863)
+......+++++ |.+++++++|||+.+|+.+-+.+|.. ++.|..|.. ...|+|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 456677788888 99999999999999999999999873 467777642 1347778
Q ss_pred cCCHhHHHHHH
Q 002955 827 LDDTAEILRML 837 (863)
Q Consensus 827 l~d~~eV~~~L 837 (863)
+++..++.++|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=6.1e-06 Score=78.05 Aligned_cols=51 Identities=16% Similarity=0.296 Sum_probs=41.5
Q ss_pred ceeEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 593 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
|+|++|+||||+.... ....+.++++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134789999999998 7789999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=5e-05 Score=76.98 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----cccc--ceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKA--KYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--~y~l~d~~ 831 (863)
+......+++++ |.+++++++|||+.+|+.+.+.+|.. ++++..|.. ...| ++++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 466778888888 99999999999999999999999873 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00014 Score=76.16 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 835 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~ 835 (863)
+..|..+++. + +..++++++|||+.||+.|.+.+|..++.+.+ ...-.....+.+.+++..+|..
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l--------~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKVFARDFL--------ITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHH--------HHHHHHcCCCccccCCHHHHHH
Confidence 3457766554 4 66778999999999999999999874321000 0000123445566789999999
Q ss_pred HHHHHHH
Q 002955 836 MLLGLAE 842 (863)
Q Consensus 836 ~L~~L~~ 842 (863)
.|+.+-+
T Consensus 211 ~l~~~~~ 217 (219)
T PRK09552 211 ELKHLLE 217 (219)
T ss_pred HHHHHhc
Confidence 9887754
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.8e-05 Score=82.83 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecC
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 828 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 828 (863)
.+.+|..+++.+++++ |. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998877 64 6899999999999997765542 33445531 235889999
Q ss_pred CHhHHHHHH
Q 002955 829 DTAEILRML 837 (863)
Q Consensus 829 d~~eV~~~L 837 (863)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999887764
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.6e-05 Score=83.27 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=54.6
Q ss_pred ccceeEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CC-ceEEccCcEEEE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVR 664 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~-l~liaenGa~I~ 664 (863)
..++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...+..+ .. ...+..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 358999999999999 45554 69999999999 8899999999999999888887654 11 234445555543
Q ss_pred e
Q 002955 665 P 665 (863)
Q Consensus 665 ~ 665 (863)
.
T Consensus 201 ~ 201 (301)
T TIGR01684 201 E 201 (301)
T ss_pred C
Confidence 3
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=8e-05 Score=78.01 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+.. ...|++++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 567889999999 99999999999999999999999973 234433321 13577778877776
Q ss_pred H
Q 002955 834 L 834 (863)
Q Consensus 834 ~ 834 (863)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 4
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.80 E-value=1.2e-05 Score=83.46 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 467889999999 99999999999999999999999973 356666632 2468899999988
Q ss_pred HHHH
Q 002955 833 ILRM 836 (863)
Q Consensus 833 V~~~ 836 (863)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.77 E-value=3.7e-05 Score=68.68 Aligned_cols=87 Identities=21% Similarity=0.270 Sum_probs=69.0
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C--ceEeCCCCHHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G--AIRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~--al~VnP~d~~~~A~ai~~a 510 (863)
+++.|+..+|+++..+|+||| |+++|.+...+....+. + ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 55666666667777773 3 67777 999999999999
Q ss_pred hCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHH
Q 002955 511 LGVSDAEKQMRHEKHYRYVS-THDVAYWARSFL 542 (863)
Q Consensus 511 L~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 542 (863)
++.| ++++...++.+++|. .|++..-++.|+
T Consensus 60 l~~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LENP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9854 566666777777776 688888777775
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00011 Score=70.14 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=37.0
Q ss_pred ceeEecCCccccCCC-----CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 593 RAILLDYDGTIMVPG-----SISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 593 rlI~~DlDGTLl~~~-----~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
|+++||+||||++.. .....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 689999999999521 01235678899999998 78899999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00024 Score=71.67 Aligned_cols=63 Identities=14% Similarity=0.098 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+...+...++++ |++++++++|||+.+|+..-+.+|... ++.|..|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~----------~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKT----------NVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcE----------EEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 999999999999999999999999731 145666742 23488999988877
Q ss_pred H
Q 002955 834 L 834 (863)
Q Consensus 834 ~ 834 (863)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=5.2e-05 Score=79.21 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d~~eV 833 (863)
+.......++++ |++|+++++|||+.+|+.+-+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 467778888888 99999999999999999999999863 345554432 24577888877765
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00018 Score=75.11 Aligned_cols=66 Identities=20% Similarity=0.178 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|... ++++..|.. ...|.+++++..
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~~----------~i~~~~g~~~~~~~~~~~~~~~i~~~~ 213 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAGA----------VVGVLTGAHDAEELSRHPHTHVLDSVA 213 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCCe----------EEEEecCCCcHHHHhhcCCceeecCHH
Confidence 678899999998 987 799999999999999999999841 145666632 245788888888
Q ss_pred HHHHHH
Q 002955 832 EILRML 837 (863)
Q Consensus 832 eV~~~L 837 (863)
++..++
T Consensus 214 ~l~~~~ 219 (220)
T TIGR03351 214 DLPALL 219 (220)
T ss_pred HHHHhh
Confidence 877654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00051 Score=74.13 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------------
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 819 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 819 (863)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 467788888888 985 69999999999999999999873 467777742
Q ss_pred -----------ccccceecCCHhHHHHHHHHHHH
Q 002955 820 -----------PSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 820 -----------~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
...|++++++..++...|+.+..
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 24588999999999888876544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00012 Score=78.09 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~e 832 (863)
+.....++++++ |++++++++|||+.+|+.+-+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 567888899998 99999999999999999999999873 467777642 3468899998887
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00041 Score=79.86 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=95.3
Q ss_pred hCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 332 FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 332 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
+.++.++++ + ...++|++++.++.|++. |=+ |.++ ++...+.++ + +| .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~----~y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-D----KY-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-H----hc-----C
Confidence 345556655 1 899999999999999987 543 5443 122333333 1 22 3
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc-ccCcccCC
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF-VGCSPSLS 490 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~-~G~~~~l~ 490 (863)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+ -|++.=+. .|..+.+.
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G-------------------~pI~afd~t~~~~~~i~ 388 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN-------------------LLILGFEETAHNRDFIA 388 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC-------------------CcEEEEecccCCccccc
Confidence 4566665 445678899999999999999999999999999962 23443333 34555556
Q ss_pred CceEeCCCCHHHHHHHHHHHhCCCH
Q 002955 491 GAIRVNPWNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 491 ~al~VnP~d~~~~A~ai~~aL~m~~ 515 (863)
++.++++.|+++++++|.++|+.+.
T Consensus 389 ~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 389 SENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred CCceecCCCHHHHHHHHHHHhcCHH
Confidence 6889999999999999999998773
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00012 Score=82.17 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCCHhHH-H
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI-L 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d~~eV-~ 834 (863)
+.......++.+ |+.++++++|||+.+|+.+-+.+|.. +++|+.+.. ...|++++++.+++ +
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 577888899998 99999999999999999999999873 355654431 24588999999998 5
Q ss_pred HHHHHHHHhh
Q 002955 835 RMLLGLAEAS 844 (863)
Q Consensus 835 ~~L~~L~~~~ 844 (863)
..|+.|...-
T Consensus 340 ~~l~~l~~~~ 349 (381)
T PLN02575 340 VDLKNLADIE 349 (381)
T ss_pred HHHhhhhhcC
Confidence 7778887754
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00011 Score=80.08 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+...+..+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|.. -..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 466888899999 99999999999999999999999973 356666632 145888888887754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00021 Score=71.39 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=38.0
Q ss_pred hcccceeEecCCccccCCCCCCCC---------CCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
.|+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 466899999999999973211111 236789999998 88899999999854
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00018 Score=77.02 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=47.9
Q ss_pred cceeEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.++|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...+..+
T Consensus 128 ~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 128 PHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred ccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 58999999999999 56666 79999999999 8899999999988888877777654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00031 Score=75.53 Aligned_cols=69 Identities=14% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|. |.. -..|++++++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 467888899999 99999999999999999999999973 34554 432 246888999998866
Q ss_pred HH-HHHHHH
Q 002955 835 RM-LLGLAE 842 (863)
Q Consensus 835 ~~-L~~L~~ 842 (863)
.. +..+++
T Consensus 232 ~~~~~~~~~ 240 (260)
T PLN03243 232 VVDLKNLSD 240 (260)
T ss_pred HHHHhhhhc
Confidence 44 334443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=72.09 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=45.9
Q ss_pred cceeEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
.+++++|+||||...... +..+.+.+.+.|++| ++.|+.++++|||+....+..+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999973211 346789999999999 77899999999999888776664
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0006 Score=79.55 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 833 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV 833 (863)
.|...+...++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|.+++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3666777777654 468999999999999999999973 356666532 24688999999998
Q ss_pred HHHHHHH
Q 002955 834 LRMLLGL 840 (863)
Q Consensus 834 ~~~L~~L 840 (863)
..+|..+
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8877543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00059 Score=66.74 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
|...++.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 677888889988 9999999999999999999999987
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0026 Score=63.83 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=45.4
Q ss_pred cccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 575 FRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 575 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
+..++.+.+ ++...+++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 12 ~~~i~~~~~----~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 12 LNDLTIDLL----KKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred hhhCCHHHH----HHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 334555544 3457899999999999984 2336788999999998 88899999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00034 Score=71.77 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh--hhhcCCCCCCCCcceEEEEeCCCc--cccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKP--SKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~A~y~l~d~~eV~ 834 (863)
|...+..+++++ | ++.+++|||+.+|+..-+.+ |.. ++.+.+|..+ -.+.|.+++..++.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 678889999988 7 78899999999999999998 873 4677777632 25568788777654
|
2 hypothetical protein; Provisional |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=65.95 Aligned_cols=38 Identities=18% Similarity=0.089 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
|...++.+++++ +++++++++|||+.+|+.+.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 677888888888 99999999999999999999999873
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00066 Score=71.34 Aligned_cols=70 Identities=16% Similarity=0.072 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--ccccceecCCHhHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--PSKAKYYLDDTAEILRM 836 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~d~~eV~~~ 836 (863)
+....+++++++ |++++++++|||+.+|+..-+.+|... +++|+.+.. ...|.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRY----------CLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeE----------EEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 467888899999 999999999999999999999998731 245555542 24444556677777777
Q ss_pred HHHHH
Q 002955 837 LLGLA 841 (863)
Q Consensus 837 L~~L~ 841 (863)
|+.|.
T Consensus 218 ~~~l~ 222 (224)
T PRK14988 218 IPSLM 222 (224)
T ss_pred hhhhc
Confidence 77653
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00089 Score=69.82 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-------cccceecCCH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDT 830 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l~d~ 830 (863)
+....+.+++++ |++++++++|||+. +|+.+-+.+|.. ++.+..|... ..+.|++++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 456888899998 99999999999997 999999999873 2344444321 2456777776
Q ss_pred hHH
Q 002955 831 AEI 833 (863)
Q Consensus 831 ~eV 833 (863)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0014 Score=66.14 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=33.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.+.|..|+..++.+.+.. ++.+++|||+.||+.|.+.++..+
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCccc
Confidence 345678988888887642 688999999999999999987643
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0013 Score=70.35 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=40.3
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
+++.++||+||||.. ...+-+.+.++|++| ++.|.+++++|-.+...-+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHH
Confidence 357899999999997 567778999999999 8899999999765544433
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0062 Score=61.43 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 577888889988 9999999999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0012 Score=62.93 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=42.4
Q ss_pred ceeEecCCccccCCCC--CCC-------CCCHHHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHhh
Q 002955 593 RAILLDYDGTIMVPGS--IST-------SPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWFS 648 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~--~~~-------~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~~ 648 (863)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998410 111 2467999999998 7889999999999 6666656553
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0011 Score=75.32 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+......+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|++.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 567889999999 99999999999999999999999973 356665532 256777888877754
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.023 Score=60.35 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=42.2
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH--HHhhc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA--EWFSS 649 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~--~~~~~ 649 (863)
++++++||+||||.. ...+-+.+.++|++| ++.|..++|+|..+..... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHH
Confidence 368999999999997 345679999999999 7789999999886654333 44443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.022 Score=60.28 Aligned_cols=50 Identities=28% Similarity=0.427 Sum_probs=41.3
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhc
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSS 649 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~ 649 (863)
++||+||||++ ... +-+.+.++|+.+ +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 344 445889999998 88899999998 8999988777754
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.004 Score=74.51 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=50.6
Q ss_pred HHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCC-CeEEEEcCCChhhHHHHhhcc
Q 002955 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK-NVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 586 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g-~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.....+.+++..||+++..-.....+-+.+.+.|++| ++.| +.++++||.+........+.+
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344555688889999988862223456889999999998 8889 999999999999988888543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0023 Score=67.57 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=50.0
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCC---CCCC-CCH---------------------------HHHHHHHHhh
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS---ISTS-PNA---------------------------EAVAILDNLC 625 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~-~s~---------------------------~~~~aL~~L~ 625 (863)
=.++++|.+..+..+.-.|+||+||||++..+ .... +++ .+.+.|+.+
T Consensus 48 ~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l- 126 (237)
T TIGR01672 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH- 126 (237)
T ss_pred EEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-
Confidence 36789999988777666999999999998543 1111 122 267788887
Q ss_pred cCCCCeEEEEcCCC----hhhHHHHh
Q 002955 626 RDPKNVVFLVSGKD----RDTLAEWF 647 (863)
Q Consensus 626 ~d~g~~V~I~TGR~----~~~l~~~~ 647 (863)
++.|+.++|+|+|. ...++.++
T Consensus 127 ~~~G~~i~iVTnr~~~k~~~~a~~ll 152 (237)
T TIGR01672 127 QRRGDAIFFVTGRTPGKTDTVSKTLA 152 (237)
T ss_pred HHCCCEEEEEeCCCCCcCHHHHHHHH
Confidence 78899999999993 33444444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0038 Score=61.15 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
+...+.++++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999998 9988 9999999999999888765
|
HAD subfamilies caused by an overly broad single model. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0032 Score=65.45 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
|-.|-..++.. + |.+.+...+-|||.||++||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44455444443 3 55667789999999999999999974
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=65.76 Aligned_cols=114 Identities=13% Similarity=0.120 Sum_probs=80.6
Q ss_pred ccceeEecCCccccCCC--CC------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 591 KNRAILLDYDGTIMVPG--SI------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~--~~------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
.+|+|++|+|+||.... .. -..+.+.+.+.|++| ++.|+.++|||..+...+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~---------- 70 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD---------- 70 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc----------
Confidence 36899999999998732 00 112457899999998 888999999999988877777642110
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
+.. +.++| ..
T Consensus 71 -----------~~~------------~~~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 71 -----------FIL------------QAEDF-----------------------------------------------DA 80 (320)
T ss_pred -----------ccC------------cHHHe-----------------------------------------------eE
Confidence 000 00000 00
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
+..+ .. .|...++.+++++ |++++.+++|||+..|+.+.+.+.
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 1011 12 4999999999999 999999999999999999988865
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0063 Score=76.34 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.7
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
..+.....+.+++-.||+++..-.....+-+.+.++|++| ++.|+.++++||......+.+.+.
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHH
Confidence 3444455677888889987631113445667888999998 888999999999999988888754
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0048 Score=63.49 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 798 (863)
....+++++++ |++++++++|||+. +|+..-+.+|.
T Consensus 163 ~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 45688889988 99999999999997 89999999986
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0071 Score=71.97 Aligned_cols=59 Identities=17% Similarity=0.204 Sum_probs=45.6
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCC-eEEEEcCCChhhHHHHhhcc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKN-VVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~-~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.++.-.||++...-.....+-+.+.++|++| ++.|+ .++++||.+....+.+.+.+
T Consensus 341 ~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 341 GKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 3456666778887752113456789999999998 88899 99999999999998888643
|
. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0092 Score=58.33 Aligned_cols=61 Identities=21% Similarity=0.224 Sum_probs=54.0
Q ss_pred HHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 587 YKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 587 y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.++..+|-|++|+|.||++. .+...++++++-+.++ ++.|+.++|+|.-+...+..+...+
T Consensus 23 L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 35678999999999999997 6778899999999998 9999999999999988898888543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0015 Score=68.23 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+......+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 578889999999 99999999999999999999999873
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.016 Score=69.31 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=47.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
...+.++++.||+++..-.-...+.+.+.++|++| ++.|+.++++||......+.+.+.
T Consensus 383 ~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 383 QGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 34578889999998752113456789999999998 888999999999999988888754
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.012 Score=70.94 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=51.2
Q ss_pred HHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 583 IVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 583 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.+.+...+.+++-.|++++.--.....+-+++.+++++| ++.|+.++++||........+..++
T Consensus 417 ~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 417 AVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 334455555677888788887752113456789999999997 8899999999999999999988643
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.14 Score=56.40 Aligned_cols=203 Identities=20% Similarity=0.216 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-------
Q 002955 578 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC------- 650 (863)
Q Consensus 578 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l------- 650 (863)
|++.+|..--+....+|+-||=|+||..... .-..+..++.-|-+| -..|+.|.|+|.=++....++...+
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 3444444433334679999999999998331 112355666666666 5679999999988876554443321
Q ss_pred -----------CCceE-EccCcEEEEeCCc----------eeEEeecCCCCccHH--------HHHHHHHHHHhhc--CC
Q 002955 651 -----------EGLGI-AAEHGYFVRPNYG----------VDWETCVSVPDFSWK--------QIAEPVMKLYTET--TD 698 (863)
Q Consensus 651 -----------~~l~l-iaenGa~I~~~~~----------~~w~~~~~~~~~~w~--------~~v~~i~~~y~~~--~~ 698 (863)
.++.+ .+|.-+.++.+.. ..|... .-..|. +.++..+....++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 12222 2455666666543 134321 112332 2233333333332 23
Q ss_pred CceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcC------CCeEEEECC--cEEEEecCCCCHHHHHHHHHHHH
Q 002955 699 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN------EPVSVKSGP--NIVEVKPQGVNKGLVAQHQLETM 770 (863)
Q Consensus 699 gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~------~~~~v~~g~--~~vEI~p~gvsKG~al~~Ll~~l 770 (863)
..|-.|+-++-+.- .....+...+.+|+.-.++..+.. .++....|. -++||-. |..|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHHhHHHHHHHH
Confidence 34445554443321 111122345666665444444432 355555554 4788765 999999888776
Q ss_pred hh-cCCCcceEEEEeC-----CcchHH
Q 002955 771 HQ-KGMLPDFVLCIGD-----DRSDED 791 (863)
Q Consensus 771 ~~-~gi~~d~vlaiGD-----~~ND~~ 791 (863)
.. .++.+.+++-+|| +.||..
T Consensus 362 ~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HhccCCCccceeeehhhhhccCCcchh
Confidence 22 3799999999999 347754
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.02 Score=66.88 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=25.8
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
.+.+.+.|+++ ++.|..++++||.+...++....
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~ 107 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAA 107 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 46777888886 77788888888888777776664
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0014 Score=59.92 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=38.0
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
|+||+||||.. ...+-+.+.++|++| ++.|.+++++|..+...-..+...+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999997 455678889999998 8889999999877655555554443
|
... |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.027 Score=71.15 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=48.4
Q ss_pred HHHHhcccceeEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDG-----TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.|.+...|.+++=+++ |++.--....++-+.+.+++++| ++.|+.++++||........+...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 34444556878776665 44432113556789999999997 8999999999999999999998643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0075 Score=61.10 Aligned_cols=37 Identities=11% Similarity=-0.005 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+...+.++++++ |.+++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 567899999999 9999999999999999999999987
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.002 Score=65.04 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+++++++ |++++++++|||+.+|+.+-+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 455778888888 9999999999999999999999986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.1 Score=53.89 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 56778888888 9999999999999999999999986
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.038 Score=61.86 Aligned_cols=47 Identities=15% Similarity=0.264 Sum_probs=37.9
Q ss_pred ccceeEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 591 KNRAILLDYDGTIMVPGS--------ISTSPNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
+.|++++|.||||....+ ..-.+-+.+.+.|..| ++.|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 468999999999998421 1234668899999998 8889999999986
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.012 Score=60.73 Aligned_cols=66 Identities=15% Similarity=0.259 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|.+++..+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 577888899988 99999999999999999999999973 478888852 3568999999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887653
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.04 Score=70.58 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+......+++++ |++++++++|||+.+|+..-+.+|.. +++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 467888889998 99999999999999999999999873 356665532 35678889998886
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0067 Score=62.48 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=39.4
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.+..+++++..-.....+-+.+.++|++| ++.|+.++++||............+
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~l 164 (215)
T PF00702_consen 108 TVIVLAVNLIFLGLFGLRDPLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQL 164 (215)
T ss_dssp HCEEEEESHEEEEEEEEEEEBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHT
T ss_pred cccceeecCeEEEEEeecCcchhhhhhhhhhh-hccCcceeeeecccccccccccccc
Confidence 34444446665531111224557788999998 7789999999999999998888643
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.036 Score=68.49 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=50.6
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.....+.+++=+||+++..-.-..++-+.+.++|++| ++.|+.++++||........+.+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 4455555678888889988742113456788999999998 8889999999999999999988643
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.026 Score=57.49 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=60.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHH-HHHHhhhhcCCCCCCCCcceEEEEeC--CCc--c
Q 002955 747 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDED-MFEVIKSAAAGPSLSPVAEVFACTVG--QKP--S 821 (863)
Q Consensus 747 ~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~-Mf~~ag~~~~~~~~~~~~~~~av~vG--~~~--s 821 (863)
++....-|++.=||..+..+.......|+..+.++++||+.||.. |++..+.-++++- +-|++.-- .-| -
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~ 226 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLL 226 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCccee
Confidence 345556788889999999998887778999999999999999984 4444433333211 01111000 011 2
Q ss_pred cccee-cCCHhHHHHHHHHHHHhhc
Q 002955 822 KAKYY-LDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 822 ~A~y~-l~d~~eV~~~L~~L~~~~~ 845 (863)
+|.-. -.+-.++...|+.++...+
T Consensus 227 kasV~~W~sg~d~~~~L~~lik~~~ 251 (256)
T KOG3120|consen 227 KASVLEWSSGEDLERILQQLIKTIQ 251 (256)
T ss_pred eeeEEecccHHHHHHHHHHHHHHhh
Confidence 23332 2577888888888876543
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.017 Score=59.07 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=94.8
Q ss_pred CHHHHHHHHHhcccceeEecCCccccCCC---CCCCC---------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPG---SISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 579 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~---~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
..+.++..+++..+|+|++|+|-||++-. ..++. ++++....+++| ++.|+.|+|+|=-+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~---- 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKEL---- 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhh----
Confidence 35667777888999999999999999711 02232 789999999997 88999999999654332
Q ss_pred hhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHH
Q 002955 647 FSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAK 726 (863)
Q Consensus 647 ~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~ 726 (863)
+ +. ..++.+| .| .+.++..++.-. . ..-++. +..| . |.+ |+-.
T Consensus 105 ~---~~----~~~~~~I--sg---------------~~li~~~lk~s~--~-~~~i~~-----~~~y--y-p~~--w~~p 147 (219)
T PTZ00445 105 I---PS----ENRPRYI--SG---------------DRMVEAALKKSK--C-DFKIKK-----VYAY--Y-PKF--WQEP 147 (219)
T ss_pred c---cc----cCCccee--ch---------------HHHHHHHHHhcC--c-cceeee-----eeee--C-Ccc--cCCh
Confidence 1 00 0111111 01 122333322110 0 000000 1111 1 111 1111
Q ss_pred HHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 727 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 727 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
..... .=-++|....|-.=+++++++. |+.|++++.|=|+....+..+.+|.
T Consensus 148 ~~y~~-----------------~gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRP-----------------LGLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------hcccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 1124566677878889999999 9999999999999999999999886
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.041 Score=58.69 Aligned_cols=86 Identities=24% Similarity=0.496 Sum_probs=58.0
Q ss_pred HHHHHHHhhcCC---CCCEEEEeCcccchHHHHHHhhCC------CCeEEEEEeCC-C----CChhHhhc--CCCh----
Q 002955 187 IFADKVMEVISP---DDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHSP-F----PSSEIYRT--LPIR---- 246 (863)
Q Consensus 187 ~fa~~i~~~~~p---~~D~VwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~~r~--lp~r---- 246 (863)
.|+.++++.++. .-|+|++||||-.++|.+||.... ++|+.|++|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555544431 239999999999999999999763 59999999952 2 22 22221 2321
Q ss_pred ----------HHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 247 ----------DELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 247 ----------~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
.-+--|+..||.|-.-++.|++.-++.
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 245577999999999999998866543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.045 Score=69.93 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..++-+++.++++++ ++.|+.|+++|||.......+..++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 446778999999997 8999999999999999999988643
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.1 Score=66.15 Aligned_cols=41 Identities=15% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 609 ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 609 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...++-+.+.++++++ ++.|++++++||..........+.+
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHc
Confidence 3456789999999997 9999999999999999998888643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.023 Score=60.11 Aligned_cols=62 Identities=16% Similarity=0.288 Sum_probs=44.7
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCCC-------------------------------CCCCCHHHHHHHHHhh
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI-------------------------------STSPNAEAVAILDNLC 625 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~-------------------------------~~~~s~~~~~aL~~L~ 625 (863)
=.++++|.+.-...+...|.+|+|||+++.++. ...|-+.+.+.|+.|
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L- 126 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH- 126 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-
Confidence 367888988876555569999999999963210 011223477888887
Q ss_pred cCCCCeEEEEcCCC
Q 002955 626 RDPKNVVFLVSGKD 639 (863)
Q Consensus 626 ~d~g~~V~I~TGR~ 639 (863)
++.|+.++++|||+
T Consensus 127 ~~~G~~I~iVTnR~ 140 (237)
T PRK11009 127 VKRGDSIYFITGRT 140 (237)
T ss_pred HHCCCeEEEEeCCC
Confidence 77888999999986
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.04 Score=47.19 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------ccccceecCCH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 830 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~d~ 830 (863)
...++.+++.+ +++++++++|||+ .+|+.+-+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34667788888 9999999999999 9999999999973 245555542 24788888887
Q ss_pred hH
Q 002955 831 AE 832 (863)
Q Consensus 831 ~e 832 (863)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 65
|
... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.025 Score=52.88 Aligned_cols=54 Identities=26% Similarity=0.313 Sum_probs=42.7
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--Cc----cccceecCCHhHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KP----SKAKYYLDDTAEILRMLLGL 840 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~A~y~l~d~~eV~~~L~~L 840 (863)
+.+.++|+++||+.||+.|++.+...+ |++++ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlGI-------------~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLGI-------------CTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccce-------------EEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 456689999999999999999998752 55664 33 45888899999988887654
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.09 Score=63.81 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=50.0
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+...+.+++-.|++++.--.-...+-+++.+++++| ++.|++++++||-.......+..++
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 4444455677777788888742113456789999999997 8999999999999999999988643
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.11 Score=66.27 Aligned_cols=138 Identities=16% Similarity=0.236 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|++++++||........+... +|+...++..+. ..+
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~------------G~~---------- 630 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME------------GKE---------- 630 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee------------HHH----------
Confidence 446788999999997 889999999999999999998864 445433221100 000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++ ..+ .+.+.+.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 631 ~~-----------------------~l~-----------~~el~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 631 FR-----------------------RLV-----------YEEMDPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred hh-----------------------hCC-----------HHHHHHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00 000 01122222221 123456664 588888887553
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-C----CccccceecC--CHhHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~----~~s~A~y~l~--d~~eV~~~L 837 (863)
| .-|.++||+.||.+|++.|+. ++++| . .+..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 4 469999999999999999985 56666 2 3577888874 455555555
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.054 Score=54.76 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=28.4
Q ss_pred HHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 615 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 615 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+.+.+.|+.+ ++.|..++|+||-....++.+...
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5667888887 777999999999998888888753
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.092 Score=67.70 Aligned_cols=185 Identities=14% Similarity=0.143 Sum_probs=94.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCcc-HHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFS-WKQIAEP 688 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~-w~~~v~~ 688 (863)
..++-+.+.+++++| ++.|++++++||-.......+...+ +++..+.-.+...+... .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~~---~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYSC---RLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445677888888887 8889999999999999998887543 44443332222221110 0000 0011111
Q ss_pred HHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHH
Q 002955 689 VMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLE 768 (863)
Q Consensus 689 i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~ 768 (863)
.......... ..-..+...+.+.-. .+......++.+++.+.+...... -+-.+.|. .|+..++.+.+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~v-----V~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAV-----ICCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEE-----EEeCCCHH--HHHHHHHHHHh
Confidence 0000000000 000011111222110 000000011122233333222111 13455564 69998888765
Q ss_pred HHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe-CC----CccccceecCCHhHHHHHH
Q 002955 769 TMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV-GQ----KPSKAKYYLDDTAEILRML 837 (863)
Q Consensus 769 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~A~y~l~d~~eV~~~L 837 (863)
.. | .-|+++||+.||.+|++.|..+ |.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~---~---~~vl~iGDG~ND~~mlk~AdVG--------------Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST---G---KTTLAIGDGANDVSMIQEADVG--------------VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC---C---CeEEEEeCCCccHHHHhhcCee--------------eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 43 2 5699999999999999999864 433 32 3467888887766665555
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.028 Score=56.04 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=37.7
Q ss_pred cccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 573 PNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 573 ~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
++|..++.+.- ..++..+|.++||.|+||++. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 45666666541 135678999999999999975 6788999999999997
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.2 Score=64.78 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+.+.+.+++++| ++.|+.++++||........+...+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 456788999999998 8899999999999999888887543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.12 Score=62.66 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=49.2
Q ss_pred HHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 581 DHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 581 ~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+...+.+.+...+.++.-.|++++.----...+-+++.+++++| ++.|++++++||-.......+.+++
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33444554444565554447777641113456789999999997 8899999999999999999988643
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.048 Score=57.12 Aligned_cols=56 Identities=16% Similarity=0.212 Sum_probs=43.0
Q ss_pred ccceeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh---HH
Q 002955 591 KNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~ 644 (863)
.+-+++||+|.|++...+ ....+-+.++++++.+ ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 357899999999997321 1234568899999998 88999999999999765 44
Q ss_pred HHh
Q 002955 645 EWF 647 (863)
Q Consensus 645 ~~~ 647 (863)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 444
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.19 Score=64.73 Aligned_cols=47 Identities=11% Similarity=0.202 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenG 660 (863)
...+.+++.+++++| ++.|++++++||..........++ +|++..++
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~~---~gii~~~~ 700 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVARE---CGIVNPSN 700 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCCCCc
Confidence 345778999999997 889999999999999999998854 45654443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.71 E-value=2.4 Score=48.01 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=132.4
Q ss_pred hcCCCCCEEEEeCccc--chHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 195 VISPDDDFVWVHDYHL--MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 195 ~~~p~~D~VwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
..+| |+|..=||.= +-+...+|++.+..|+.++. +|.+|.==++|-..++.. +|.+- -.+.+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3456 7877778872 45678999998888887776 344443335666555553 33321 11112222322
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeE--EEeecCccc-c
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIV--MLGVDDMDI-F 347 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~Vdrld~-~ 347 (863)
+.| +-..|-|+.. +|. . ...+.. ...++.+ .++++ +|-=+|-.. .
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~--~---~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE--V---KPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh--h---ccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1234445432 111 1 011111 1112222 33332 333456654 4
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
+.++..++|.+++.+++|+++ ++....+. .....+.+.....+. + .+++.. ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~-----~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPP-----D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCC-----C-CeEEEc-----CCchHH
Confidence 455888999999999999987 65444322 112222222222211 1 123332 236778
Q ss_pred HHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCC-CCCccEEecccccCcccCCCc-----eEeCCCCHH
Q 002955 428 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST-AKSSMLVVSEFVGCSPSLSGA-----IRVNPWNID 501 (863)
Q Consensus 428 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~-~~~g~lVlSe~~G~~~~l~~a-----l~VnP~d~~ 501 (863)
.++.||+.+++| |.+.+|++..+.|. +.. -..++-+ -=.-.+|-..+.|....+-|- ++-+-.+++
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~--Vv~-Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~ 328 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPM--VVA-YKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPE 328 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCE--EEE-EcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHH
Confidence 899999999999 88999998885541 000 0000000 000123346677777666442 334456889
Q ss_pred HHHHHHHHHhCCCHH
Q 002955 502 AVAEAMDSALGVSDA 516 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~ 516 (863)
.+++++...|..++.
T Consensus 329 ~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 329 NIAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHHhcCHHH
Confidence 999999999986543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.022 Score=56.52 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=31.4
Q ss_pred ceeEecCCccccCCCCCCC--------C-CCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 593 RAILLDYDGTIMVPGSIST--------S-PNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~--------~-~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
|+.+||+||||+...+... . ..+.+.++|++| .+.|..++|+|-.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeCc
Confidence 6899999999997432111 1 345799999998 7788999998854
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.05 Score=56.27 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc---cccce--ecCCH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---SKAKY--YLDDT 830 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~A~y--~l~d~ 830 (863)
+-.|...++.+ +.. | .+++++||+.||++|++.++. +|++..+| ..|+- .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 45688888887 444 4 379999999999999999987 45566554 33332 24577
Q ss_pred hHHHHHHHHH
Q 002955 831 AEILRMLLGL 840 (863)
Q Consensus 831 ~eV~~~L~~L 840 (863)
+++++.+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777776654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.0077 Score=60.05 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=45.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-CCccccceecCCHh
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-QKPSKAKYYLDDTA 831 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~~s~A~y~l~d~~ 831 (863)
+..+-.|+.++..+.+ +.+...++++||+.||++|..-+....+-+ ++.+- ..+..|+||+++..
T Consensus 154 tsdsggKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~afi~~~---------g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADAFIGFG---------GNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred cccCCccHHHHHHHHh-----CCChheeEEecCCccccccCCchhhhhccC---------CceEcHhhHhccHHHHHHHH
Confidence 4446679999999887 567889999999999999987754432210 11111 13577888877655
Q ss_pred HHH
Q 002955 832 EIL 834 (863)
Q Consensus 832 eV~ 834 (863)
.+.
T Consensus 220 ~L~ 222 (227)
T KOG1615|consen 220 VLG 222 (227)
T ss_pred HHc
Confidence 443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.065 Score=55.08 Aligned_cols=53 Identities=15% Similarity=0.173 Sum_probs=39.1
Q ss_pred CcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce-ecCCHhHHHHHHHHHHH
Q 002955 776 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY-YLDDTAEILRMLLGLAE 842 (863)
Q Consensus 776 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y-~l~d~~eV~~~L~~L~~ 842 (863)
.++++++|||+.||++|.++++.. |.++.. ...+.+ .+++..++.+.|.....
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 357899999999999999999852 334432 124455 68899999888776543
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.045 Score=56.10 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.+-.|...++.++++. +++++.++++||+.+|++|++.++..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999887 99999999999999999999999974
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.30 E-value=2 Score=48.01 Aligned_cols=292 Identities=16% Similarity=0.146 Sum_probs=145.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcc--cchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH
Q 002955 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL 253 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l 253 (863)
..|+.|.+.=+.+ .+ -+| |++..=|+- =..|...||+..|++||..+.- ||-=.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 4566665544333 22 245 777776765 3457889999999999998872 3322222 444333332
Q ss_pred HhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-
Q 002955 254 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF- 332 (863)
Q Consensus 254 l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 332 (863)
.+|++.--.+.- ..|.+. .|+. ..|-|++.. |.-.+. +. .+..|+++
T Consensus 136 -~~D~lLailPFE-~~~y~k----~g~~---------~~yVGHpl~--------d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFE-PAFYDK----FGLP---------CTYVGHPLA--------DEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCC-HHHHHh----cCCC---------eEEeCChhh--------hhcccc-----cc----HHHHHHHhC
Confidence 245443211111 112210 1111 234444321 111111 11 12244444
Q ss_pred ---CCCeEEEee--cCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 333 ---KGQIVMLGV--DDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 333 ---~~~~vil~V--drld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
..+.+.+-- -|=+...-++-.++|++++.+++|+++ ++.-..+ +.++.++.+.. +.-
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~---~~~------ 245 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEAL---KWE------ 245 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHh---hcc------
Confidence 344443333 334556667778899999999999988 5544332 23333333321 111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCC-CCccEEecccccCc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTA-KSSMLVVSEFVGCS 486 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~-~~g~lVlSe~~G~~ 486 (863)
...+.++ +...+....+.+||+.+..| |.+.+|++.|+.|.- .. -..++-.- =.-.+|-.-+++..
T Consensus 246 -~~~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~V--v~-Yk~~~it~~iak~lvk~~yisLp 312 (381)
T COG0763 246 -VAGLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMV--VA-YKVKPITYFIAKRLVKLPYVSLP 312 (381)
T ss_pred -ccCceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEE--EE-EeccHHHHHHHHHhccCCcccch
Confidence 0011122 23457888899999999999 889999999955410 00 00000000 00012223344444
Q ss_pred ccCCCceEeC-----CCCHHHHHHHHHHHhCCCHH--HHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 487 PSLSGAIRVN-----PWNIDAVAEAMDSALGVSDA--EKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 487 ~~l~~al~Vn-----P~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
..+.|--+|+ -..++.+|+++...+..+.. +..+....+++++.+..+..-+.+.+-
T Consensus 313 NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 313 NILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 4443322221 13468999999999986622 233345556666666535554444443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.49 Score=58.79 Aligned_cols=165 Identities=17% Similarity=0.202 Sum_probs=98.0
Q ss_pred HHhcccceeEecC---Cc--cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcE
Q 002955 587 YKRTKNRAILLDY---DG--TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 587 y~~s~~rlI~~Dl---DG--TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa 661 (863)
+.....|.+++=+ ++ +++.--.-...+-+++.++++++ ++.|+.++++||........+.+++ |+.. +
T Consensus 412 ~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l---GI~~-~-- 484 (755)
T TIGR01647 412 LASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRL---GLGT-N-- 484 (755)
T ss_pred HHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCCC-C--
Confidence 3334456666644 33 55432123456789999999997 8899999999999999999998654 4421 0
Q ss_pred EEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCe
Q 002955 662 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPV 741 (863)
Q Consensus 662 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~ 741 (863)
+. .+ ..+ .+ |.. ....+ ..+ +.+.+.+.
T Consensus 485 -~~-~~-------------------~~l----~~---~~~-----------~~~~~-------~~~----~~~~~~~~-- 512 (755)
T TIGR01647 485 -IY-TA-------------------DVL----LK---GDN-----------RDDLP-------SGE----LGEMVEDA-- 512 (755)
T ss_pred -Cc-CH-------------------HHh----cC---Ccc-----------hhhCC-------HHH----HHHHHHhC--
Confidence 00 00 000 00 000 00000 112 22222221
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--- 818 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--- 818 (863)
.-+-++.|. .|...++.+.++ | .-|.++||+.||.+.|+.++. ++++|.
T Consensus 513 -----~vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~gtd 564 (755)
T TIGR01647 513 -----DGFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGATD 564 (755)
T ss_pred -----CEEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCCcH
Confidence 234566675 588888876543 4 469999999999999999985 566664
Q ss_pred -Cccccceec--CCHhHHHHHHH
Q 002955 819 -KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 819 -~~s~A~y~l--~d~~eV~~~L~ 838 (863)
.+..|+.++ ++...+...++
T Consensus 565 vAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 565 AARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred HHHHhCCEEEEcCChHHHHHHHH
Confidence 256677776 34555554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.34 Score=61.27 Aligned_cols=136 Identities=15% Similarity=0.186 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
..+|-+++.++++++ ++.|+.++++||-.......+.+++ |+. ++ . .+.. .+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l---GI~--~~--------~----v~~G---------~e- 599 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEV---GLD--AG--------E----VLIG---------SD- 599 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCC--cc--------C----ceeH---------HH-
Confidence 446778999999997 8899999999999999999988644 441 10 0 0000 00
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ .++ +.+.+.+. .-+-++.|. +|...++.+.++
T Consensus 600 l~~-----------------------l~-------~~e----l~~~~~~~-------~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 600 IET-----------------------LS-------DDE----LANLAERT-------TLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred HHh-----------------------CC-------HHH----HHHHHhhC-------cEEEEcCHH--HHHHHHHHHHHC
Confidence 000 00 011 22222221 234456664 588888876543
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRML 837 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L 837 (863)
| .-|.++||+.||-++++.|+. ++++|. .+..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAADI--------------GISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCCE--------------EEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 4 569999999999999999985 666764 257788877 3444444443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.4 Score=56.37 Aligned_cols=65 Identities=23% Similarity=0.319 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----CccccceecCCHhH
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDTAE 832 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l~d~~e 832 (863)
.-|+..++.|.++- | ..|.||||+.||..|.+.++.++ ++ +|+ +.-+|+|-+....-
T Consensus 767 tQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~Gi------------GI-~gkEGkQASLAADfSItqF~H 827 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVGI------------GI-VGKEGKQASLAADFSITQFSH 827 (1051)
T ss_pred hHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccce------------ee-ecccccccchhccccHHHHHH
Confidence 45888888777764 4 67999999999999999987642 33 332 24567777766666
Q ss_pred HHHHHHHH
Q 002955 833 ILRMLLGL 840 (863)
Q Consensus 833 V~~~L~~L 840 (863)
|-++|-..
T Consensus 828 v~rLLl~H 835 (1051)
T KOG0210|consen 828 VSRLLLWH 835 (1051)
T ss_pred HHHHhhcc
Confidence 66666543
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.085 Score=51.86 Aligned_cols=56 Identities=14% Similarity=0.281 Sum_probs=41.8
Q ss_pred eeEecCCccccCCC------C--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChh---hHHHHhhcc
Q 002955 594 AILLDYDGTIMVPG------S--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRD---TLAEWFSSC 650 (863)
Q Consensus 594 lI~~DlDGTLl~~~------~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~---~l~~~~~~l 650 (863)
++++|+||||+... + ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 58999999999731 0 0113567888999998 8899999999999964 455666544
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.41 Score=60.38 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|++++++||-.......+.++ +|+..+ . .+...+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~~----------~----v~~g~~---------- 564 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDAN----------D----FLLGAD---------- 564 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCCC----------C----eeecHh----------
Confidence 346789999999997 999999999999999999888864 344210 0 000000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ ..++ .+.+.+ ..-+-.+.|. .|...++.+.++
T Consensus 565 l~~-----------------------~~-------~~el----~~~~~~-------~~vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 565 IEE-----------------------LS-------DEEL----ARELRK-------YHIFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred hhh-----------------------CC-------HHHH----HHHhhh-------CeEEEECCHH--HHHHHHHHHHhC
Confidence 000 00 0111 112221 1124455564 588888876543
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L~ 838 (863)
| ..|.++||+.||.++++.|+. ++++|. .+..|+.++ ++...+...+.
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 4 469999999999999999985 666764 357788876 34455544443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.48 Score=60.00 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|+.++++||-.......+.+++ |+. ++.. +...+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~l---GI~--~~~v------------i~G~e---------- 599 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREV---GLE--PGEP------------LLGTE---------- 599 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCC--CCCc------------cchHh----------
Confidence 456779999999996 9999999999999999999998643 441 1100 00000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ .++ +.+.+.+ ..-+-++.|. .|...++.+.++
T Consensus 600 l~~-----------------------~~-------~~e----l~~~v~~-------~~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 600 IEA-----------------------MD-------DAA----LAREVEE-------RTVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred hhh-----------------------CC-------HHH----HHHHhhh-------CCEEEEeCHH--HHHHHHHHHHhC
Confidence 000 00 011 2222222 1234556674 588888877553
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L~ 838 (863)
| +-|.++||+.||-++++.|+. ++++|. .+..|+.++ +|...+...++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDADV--------------GISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCCE--------------EEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 4 569999999999999999975 666764 367788887 34555544443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.1 Score=55.68 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------------
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 819 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 819 (863)
+.......++++ |+. ++++++|||+.+|+.+-+.+|.. +++|..|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 466778888888 985 99999999999999999999973 477877742
Q ss_pred -----------ccccceecCCHhHHHHHH
Q 002955 820 -----------PSKAKYYLDDTAEILRML 837 (863)
Q Consensus 820 -----------~s~A~y~l~d~~eV~~~L 837 (863)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245788888888876654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.086 Score=53.05 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=43.5
Q ss_pred cceeEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHh
Q 002955 592 NRAILLDYDGTIMVPGS-------I----------------STSPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 647 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 647 (863)
.|+++||+|+||.++.. . ...+-+.+.+.|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 58999999999997431 0 012347889999998 7889999999988 777777766
Q ss_pred h
Q 002955 648 S 648 (863)
Q Consensus 648 ~ 648 (863)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 4
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.015 Score=57.10 Aligned_cols=99 Identities=15% Similarity=0.269 Sum_probs=46.8
Q ss_pred HHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCCh-----HHHHHH-HHhCCEecccC
Q 002955 190 DKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-----DELLRA-LLNADLIGFHT 263 (863)
Q Consensus 190 ~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r-----~eil~~-ll~~dligF~t 263 (863)
.++++..+| |+|++|.++...+...-.. +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334444466 9999999887765443322 789999999887531111111111 111111 23467665545
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHH
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQ 313 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~ 313 (863)
..-++.+.+ .|+ ...++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 444433332 122 124678899999998874
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.078 Score=57.00 Aligned_cols=53 Identities=28% Similarity=0.364 Sum_probs=39.5
Q ss_pred ccceeEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 591 KNRAILLDYDGTIMVPGS-------I----------------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
+..+|++|+|+|+++..+ . ...+-+.+.+.|+.| .+.|..++++|+|+.....
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 457999999999996321 0 112346778899998 7889999999999855444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.38 Score=56.90 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=39.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.+++=+|++++..-.....+.+.+.++++.| ++.|+.++++||............+
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 344444455555531112445667888888887 6689999999999999988888644
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.46 Score=61.06 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+-+++.++++++ ++.|++|+++||........+..++
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~~ 683 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQEV 683 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc
Confidence 456788999999996 9999999999999999999998643
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.13 Score=55.02 Aligned_cols=50 Identities=18% Similarity=0.251 Sum_probs=38.4
Q ss_pred cceeEecCCccccCCCC-----------------C-------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 592 NRAILLDYDGTIMVPGS-----------------I-------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
.-+++||+|+|++...+ . ...+-+.+++.++.+ ++.|..|+++|||+...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 47999999999994110 1 223457888899997 88999999999998654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.68 Score=58.73 Aligned_cols=41 Identities=20% Similarity=0.457 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 609 ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 609 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+|-+++.++++.+ ++.|++++++||-.......+..++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 3456778999999996 8999999999999999999998755
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.69 E-value=3 Score=45.82 Aligned_cols=168 Identities=16% Similarity=0.219 Sum_probs=107.0
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
...++++--...+...+.-+|.|.+.+-++. +.---++ |.+|+ |.||..+.+.++|++. +|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4578888888999999999999987542211 1000122 33344 4677777777777654 67
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccc--eeecccccCCCccce--eeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAEC--CLVTAVRDGMNLIPY--EYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv--~vvtS~~EGmnLv~~--Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
+.|.+..--++-++.+.++..||. |+=||. -|.-|..+ ..--| +-|+++-.|. |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecch-hH
Confidence 778888888999999999999996 555653 45555422 22233 3345555555 44
Q ss_pred ccC----CCceEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 487 PSL----SGAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 487 ~~l----~~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
.+| .+|++++ |-+++|+.|..+.+. +..+-. +..+-+.+....+|..++-+.
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 444 4699986 899999999999873 222211 233333444557787766443
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=92.54 E-value=1.5 Score=50.26 Aligned_cols=139 Identities=13% Similarity=0.104 Sum_probs=79.5
Q ss_pred CeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhh---------c
Q 002955 335 QIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINK---------I 404 (863)
Q Consensus 335 ~~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~---------~ 404 (863)
..++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345677778 55667888999999998655 5443 55444332 2334444333211 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 405 FGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 405 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
|. ...+.++. ...+..++|+.||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQ---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hc---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 00 01122221 2457889999999999886 3455999988543 33322111
Q ss_pred C------ccc---C-CCceEeCCCCHHHHHHHHHHHhCCC
Q 002955 485 C------SPS---L-SGAIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 485 ~------~~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
- .+. + .+++.+...+.+.+++++.++|+.+
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 1 011 1 3455555677899999999998753
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.13 Score=60.63 Aligned_cols=50 Identities=18% Similarity=0.151 Sum_probs=38.6
Q ss_pred cccceeEecCCccccCCCCCC---------CCCCHHHHHHHHHhhcCCCCeEEEEcCCCh
Q 002955 590 TKNRAILLDYDGTIMVPGSIS---------TSPNAEAVAILDNLCRDPKNVVFLVSGKDR 640 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~---------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~ 640 (863)
...|+++||+||||+...+.. ..+.+.+.+.|++| .+.|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 346999999999999743211 11457889999999 889999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.97 E-value=1.6 Score=44.44 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=45.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+.++-+++|+-|||-. .+. .-+...++|++| ++++..|=++|.-+.++-..+.+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999987 333 567888999999 888899999887776665555554444444
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.45 E-value=12 Score=42.39 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=47.1
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC----cccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC----SPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~----~~~l- 489 (863)
.+.+.+++.+ ++..||++| .+-|+| +..|+++++. |+|+.-+.+- +..+
T Consensus 291 ~~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~Gv-------------------P~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 291 RVVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAGV-------------------PQLVVPFFGDQPFWAARVA 344 (401)
T ss_pred EEeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcCC-------------------CEEeeCCCCCcHHHHHHHH
Confidence 4556677655 477799998 466765 6689999944 3444433331 1122
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhC
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALG 512 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~ 512 (863)
.-|+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 225666554 68999999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.34 Score=47.35 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=42.0
Q ss_pred cceeEecCCccccCCC--CC----CC-----------------CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPG--SI----ST-----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~--~~----~~-----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
++++++|+||||+... +. .. .+-+.+.+.|+.| + .+..++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 5789999999999842 10 00 1246788889998 5 479999999999998888775
Q ss_pred c
Q 002955 649 S 649 (863)
Q Consensus 649 ~ 649 (863)
.
T Consensus 80 ~ 80 (148)
T smart00577 80 L 80 (148)
T ss_pred H
Confidence 4
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.18 E-value=0.03 Score=59.07 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=47.7
Q ss_pred cccceeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 590 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
-+...|+||+|+|++...+ .....-+.+++.++.+ .+.|..|+++|||+......-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 3467999999999985210 0112335577888887 888999999999997754443
Q ss_pred hhccCCceEEccCcEEEEe
Q 002955 647 FSSCEGLGIAAEHGYFVRP 665 (863)
Q Consensus 647 ~~~l~~l~liaenGa~I~~ 665 (863)
...+...|+....+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 3333334433334444443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.38 Score=50.06 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 835 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~ 835 (863)
|..|..+++.+. ..++.+++|||+.||+.|++.++..++...+.. .-.....+-+..++-.+|.+
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~--------~~~~~~~~~~~~~~f~di~~ 206 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLN--------ECEELGLNHAPFQDFYDVRK 206 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHH--------HHHHcCCCccCcCCHHHHHH
Confidence 345888877653 346789999999999999999987433211000 00122233344688899998
Q ss_pred HHHHHH
Q 002955 836 MLLGLA 841 (863)
Q Consensus 836 ~L~~L~ 841 (863)
.|+++-
T Consensus 207 ~l~~~~ 212 (214)
T TIGR03333 207 ELENVK 212 (214)
T ss_pred HHHHHh
Confidence 887653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.53 E-value=1.4 Score=55.94 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=31.7
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
++..-.-|+..++.+.+.. ...+++|||+.||..|.+.|..+
T Consensus 775 CR~sPlQKA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred ccCCHHHHHHHHHHHHhcC------CceEEEeeCCCccchheeeCCcC
Confidence 3333445999999884432 46799999999999999988653
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=90.52 E-value=2.9 Score=44.81 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=40.8
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK 819 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 819 (863)
-.|.+||.++..++.++ |..|+.|++|-|+...+.-.+.+=.. .+-..+++.....
T Consensus 158 t~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred eCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 35789999999999999 99999999999987665544433221 1234577777653
|
The function is not known. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.16 E-value=15 Score=41.39 Aligned_cols=138 Identities=15% Similarity=0.147 Sum_probs=83.0
Q ss_pred CeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 335 QIVMLGVDDMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 335 ~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|.-..| | +-+++.. +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCC--CCcE
Confidence 4566677776655 999999999999999998865 3322222 1 2222222 122222 1124
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C-
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G- 491 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~- 491 (863)
.+..++...+...|...|-+.+=-| |=.--||-.-+. -++++=+.+.=.+.+. |
T Consensus 265 -~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 -KLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred -EEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 4445899999999999996554333 112234444321 2345544444444443 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhCCCHHH
Q 002955 492 AIRVNPWNIDAVAEAMDSALGVSDAE 517 (863)
Q Consensus 492 al~VnP~d~~~~A~ai~~aL~m~~~e 517 (863)
.++|+ .|.+.+.+++.+++++++..
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 35665 57899999999999876443
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=89.85 E-value=13 Score=42.19 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=48.9
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C-
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S- 490 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~- 490 (863)
-+.+.++++..++.++++.|+++|-.|- =++ .||.+.+.| +|. .|-.++. .
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P-------------------vv~---l~~R~e~~~~ 315 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP-------------------TIN---IGTRQKGRLR 315 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC-------------------EEe---ecCCchhhhh
Confidence 3466779999999999999999884431 122 799998432 331 1223333 2
Q ss_pred C-c-eEeCCCCHHHHHHHHHHHhC
Q 002955 491 G-A-IRVNPWNIDAVAEAMDSALG 512 (863)
Q Consensus 491 ~-a-l~VnP~d~~~~A~ai~~aL~ 512 (863)
| . +.| +.|.+++.+++.++++
T Consensus 316 g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 316 ADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred cCeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 2 447 7799999999999653
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.25 E-value=0.33 Score=49.77 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 615 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 615 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.|+.| ++. +.++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHc
Confidence 3456778887 556 899999999999888887654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=89.19 E-value=0.37 Score=53.57 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=37.5
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEc---CCChhhHHHHh
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVS---GKDRDTLAEWF 647 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~----g~~V~I~T---GR~~~~l~~~~ 647 (863)
.++||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999997 455589999999998 666 88888876 55666644443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.82 E-value=0.68 Score=48.51 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=28.4
Q ss_pred HHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 764 QHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 764 ~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
..-+++| |.+|++|++|.|+.+.+..-+++|..
T Consensus 149 L~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 149 LLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred HHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 4445566 89999999999999999999999973
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.74 E-value=0.81 Score=56.13 Aligned_cols=86 Identities=19% Similarity=0.314 Sum_probs=51.5
Q ss_pred ceeEeecCcccccCCHHHHHHHHHhcccceeEecCC--ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 565 GFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD--GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 565 ~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlD--GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
+|||+|+-. +.|....+.++ ++.++-.+=+|++ |=++- ..+.-+++..+|++| ++.+++.+.|||-+..+
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKA-QKLSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHH-hhccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 689998864 44555433333 3444444444443 43443 334556666777777 66799999999999877
Q ss_pred HHHHhhccCCceEEccCcE
Q 002955 643 LAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 643 l~~~~~~l~~l~liaenGa 661 (863)
.-...++ .|++.+.+.
T Consensus 735 aisVake---Cgmi~p~~~ 750 (1140)
T KOG0208|consen 735 AISVAKE---CGMIEPQVK 750 (1140)
T ss_pred eeehhhc---ccccCCCCe
Confidence 6655543 445544433
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=88.55 E-value=0.51 Score=48.51 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+-+.+.+.|++| ++.|+.++|+||.+...+...+..
T Consensus 76 ~~~g~~~~L~~L-~~~g~~~~i~Sn~~~~~~~~~l~~ 111 (205)
T TIGR01454 76 VFPGVPELLAEL-RADGVGTAIATGKSGPRARSLLEA 111 (205)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCchHHHHHHHHH
Confidence 445677788887 677899999999888887777654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=88.15 E-value=1.1 Score=46.60 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.8
Q ss_pred cceEEEEeCCcchHHHHHHhhhh
Q 002955 777 PDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 777 ~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.+...+-|||.||.+||+.+++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 34568999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=87.95 E-value=0.98 Score=46.93 Aligned_cols=36 Identities=6% Similarity=0.015 Sum_probs=28.5
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.+.+.|+.+ ++.|+.++|+||.....++.++..+
T Consensus 72 ~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 72 REGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred cccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHhh
Confidence 35555677777 7789999999999998888887654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.88 Score=46.49 Aligned_cols=37 Identities=14% Similarity=0.008 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.+.|+.+ ++.|..++|+||.....++.+...+
T Consensus 88 ~~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 88 LYPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred ccHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHc
Confidence 345667778887 7789999999999988888887654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.51 E-value=1.2 Score=46.43 Aligned_cols=66 Identities=20% Similarity=0.095 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C---ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K---PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~A~y~l~d~~e 832 (863)
+......+++++ |.. ++++++|||+. +|+..-+.+|.. ++.+..+. . ...|+|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 456788888888 875 58999999997 799999999973 12333221 1 1357888999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988764
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=87.20 E-value=2.1 Score=49.68 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=59.1
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+..++....++ .|=-+..+..+.++|++-|+-+ |++...|.. + ++.+.+.+.+ .|-. -.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~--~------~~~l~~~~~~----~Gv~-~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS--G------EARLRRRFAA----HGVD-PDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT--H------HHHHHHHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH--H------HHHHHHHHHH----cCCC-hhh
Confidence 455566556655 5666888999999999999876 766654431 1 1222222222 2332 233
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
+++ .+..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+
T Consensus 344 i~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm 383 (468)
T PF13844_consen 344 IIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM 383 (468)
T ss_dssp EEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH
T ss_pred EEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc
Confidence 554 556788999999999999999987777 4577899998
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=86.65 E-value=0.74 Score=48.55 Aligned_cols=77 Identities=30% Similarity=0.363 Sum_probs=52.3
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC----------CCcccc
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG----------QKPSKA 823 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG----------~~~s~A 823 (863)
|.+.-||..++.+++.....|...+.|++||||.||......++.. .++-..-| ...-+|
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~----------D~v~~R~~~~l~~~i~~~~~~~~a 215 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPR----------DVVFPRKGYPLHKLIQKNPGEVKA 215 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCC----------CEEecCCCChHHHHHhcCCCccee
Confidence 5567899999999987555578899999999999999877665431 00101111 112344
Q ss_pred cee-cCCHhHHHHHHHHH
Q 002955 824 KYY-LDDTAEILRMLLGL 840 (863)
Q Consensus 824 ~y~-l~d~~eV~~~L~~L 840 (863)
+-. -.+-.++.+.|++|
T Consensus 216 ~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 216 EVVPWSSGEEILEILLQL 233 (234)
T ss_pred EEEecCCHHHHHHHHHhh
Confidence 443 36888888888876
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=86.05 E-value=1.9 Score=49.22 Aligned_cols=73 Identities=16% Similarity=0.212 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcccceeEecCCccccCCC-------------CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 580 IDHIVSAYKRTKNRAILLDYDGTIMVPG-------------SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 580 ~~~i~~~y~~s~~rlI~~DlDGTLl~~~-------------~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
+..++.+-.....|.+++|+|+||..-. +..+.+-.+..+.+..| .++|+.++|||=-.....++.
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~ev 288 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKEV 288 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHHH
Confidence 4556666666678999999999998621 11223446777888898 899999999999999999999
Q ss_pred hhccCCc
Q 002955 647 FSSCEGL 653 (863)
Q Consensus 647 ~~~l~~l 653 (863)
|...|..
T Consensus 289 F~khp~M 295 (574)
T COG3882 289 FRKHPDM 295 (574)
T ss_pred HhhCCCe
Confidence 9766543
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.97 E-value=0.67 Score=46.38 Aligned_cols=45 Identities=13% Similarity=0.221 Sum_probs=29.5
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
.++||.|. +|-.=.+.|.+.. |+++++++.|=|...-.+--+..|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 35788775 8999999999988 999999999988654444433344
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.91 E-value=0.68 Score=47.53 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=50.1
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--Cccccc
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAK 824 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~ 824 (863)
.-+=.+| --.|.++.++.. |+. |++++.|-||.+-+.--+.+|.. +|-||. +-..++
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 4444555 345778887777 998 99999999999999999999873 566664 335566
Q ss_pred eecCCHhHHHHHHHHH
Q 002955 825 YYLDDTAEILRMLLGL 840 (863)
Q Consensus 825 y~l~d~~eV~~~L~~L 840 (863)
|.+.+.....+.+-.|
T Consensus 215 ~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 215 YALEQIHNNKEALPEL 230 (244)
T ss_pred HHHHHhhchhhhchHH
Confidence 6665444444444333
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.87 E-value=0.89 Score=45.89 Aligned_cols=46 Identities=22% Similarity=0.297 Sum_probs=35.5
Q ss_pred cceeEecCCccccCCCC-C-----CCCCCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 592 NRAILLDYDGTIMVPGS-I-----STSPNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-~-----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
.++||+|-||||.-..+ . +-...+.++.+|.+| ++.|..++++|-.
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l-~~~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKL-QRAGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHH-HhCCCeEEEEECC
Confidence 58999999999986322 1 112457889999998 8889999999865
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=85.78 E-value=0.45 Score=46.84 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=37.7
Q ss_pred ceeEecCCccccCCCCCCC----------------CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 593 RAILLDYDGTIMVPGSIST----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
|++++|+||||+....... ..-|.+.+.|+.+++ ...++|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997431111 024667777887633 5899999999998888888766
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=85.56 E-value=68 Score=36.03 Aligned_cols=257 Identities=16% Similarity=0.087 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEec
Q 002955 183 SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIG 260 (863)
Q Consensus 183 ~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dlig 260 (863)
.+=..|++.+ +..+| |+|.||.=-...+..-|-...-++||+.. |---=+.|. +-|.-+|+.|-+. -||+--
T Consensus 54 ~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf 127 (346)
T PF02350_consen 54 LAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHF 127 (346)
T ss_dssp HHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEE
T ss_pred HHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhc
Confidence 3334444444 34477 89999988777777666665667775432 211101111 1244455554432 256665
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEe
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLG 340 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~ 340 (863)
--|..+.++.++ +|.+. ++ +.. +-.+++|.-........+... ...+.....++.+++.
T Consensus 128 ~~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt 186 (346)
T PF02350_consen 128 APTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVT 186 (346)
T ss_dssp ESSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE
T ss_pred cCCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEE
Confidence 567877777765 34421 11 111 123466654332211111110 1122222344555555
Q ss_pred ecCcccc---cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002955 341 VDDMDIF---KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 417 (863)
Q Consensus 341 Vdrld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~ 417 (863)
.=|.... ......+.+++.+.+. +++. +|....++ ....+.+.+...++ ..+. +.
T Consensus 187 ~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~-~~ 244 (346)
T PF02350_consen 187 LHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVR-LI 244 (346)
T ss_dssp -S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEE-EE
T ss_pred eCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEE-EE
Confidence 5554433 3466777788888777 5544 55444222 12233332222221 1233 44
Q ss_pred CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceE
Q 002955 418 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIR 494 (863)
Q Consensus 418 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~ 494 (863)
.+++..++.++++.|+++|=.|- | +..||..++. |+|.=...|-.++. ..+++
T Consensus 245 ~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-------------------P~v~iR~~geRqe~r~~~~nvl 300 (346)
T PF02350_consen 245 EPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-------------------PVVNIRDSGERQEGRERGSNVL 300 (346)
T ss_dssp ----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEE
T ss_pred CCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-------------------eEEEecCCCCCHHHHhhcceEE
Confidence 58999999999999999987762 2 2339888843 34444445555554 34566
Q ss_pred eCCCCHHHHHHHHHHHhCC
Q 002955 495 VNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 495 VnP~d~~~~A~ai~~aL~m 513 (863)
|. .|.+++.+||.+++..
T Consensus 301 v~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 301 VG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ET-SSHHHHHHHHHHHHH-
T ss_pred eC-CCHHHHHHHHHHHHhC
Confidence 64 8999999999999964
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=84.05 E-value=2.8 Score=44.94 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=44.4
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
...+|+||+|.||+.......-+.+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 3569999999999984322334679999999999 888988888877777766666644
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=83.71 E-value=1.9 Score=42.86 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=34.5
Q ss_pred cceeEecCCccccCCCCCCCC---------------------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTS---------------------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~---------------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
++.+++|+|+||+........ .-|.+.+.|.+| .+. ..++|.|.-+...+..++..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 368999999999974211100 124556666666 332 667777766666666655433
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=83.69 E-value=12 Score=42.59 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=57.5
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcc----cC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP----SL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~----~l- 489 (863)
.+.+.+++. .++..||++|. +-|.| +..|+++++. |+|+.-..+-.+ .+
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~l~ 331 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-------------------PMVAVPQGADQPMTARRIA 331 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-------------------CEEecCCcccHHHHHHHHH
Confidence 455677765 56788998885 45766 6689999944 344433332111 12
Q ss_pred --CCceEeCC--CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHH
Q 002955 490 --SGAIRVNP--WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWAR 539 (863)
Q Consensus 490 --~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 539 (863)
..|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 332 ~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 332 ELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 22555553 46799999999999754 344444555544443 33444443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=83.62 E-value=1.4 Score=42.16 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=40.0
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-----HHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-----~~ll~~dligF~t~~~~~~Fl~ 272 (863)
-|+|++|+++..++..+++++. ++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRRR-GIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHHH-T--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHcc-CCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3999999998888887777443 7999999997543221 12222222 4455688888888877776654
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=82.98 E-value=2.4 Score=43.87 Aligned_cols=66 Identities=20% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc----cccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~d~~eV 833 (863)
+....+.+++++. |++++++++|||+. +|+.+-+.+|.. .+.+..|..+ ..+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 4556667666541 78899999999997 899999999973 2445554322 3567888888887
Q ss_pred HHHH
Q 002955 834 LRML 837 (863)
Q Consensus 834 ~~~L 837 (863)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.90 E-value=2 Score=44.12 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=41.4
Q ss_pred cccceeEecCCccccCCCCCCCC----CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTS----PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~----~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
..+|++++|||+||++..+.... .-|.+.+.|+.+.+ ...|+|-|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 45689999999999974221211 23677788888643 788888888888777776653
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=82.05 E-value=1.5 Score=45.34 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.+.|+.+ ++.+ .++|+||-....+..++..+
T Consensus 69 l~pga~ell~~l-k~~~-~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWL-RERF-QVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHH-HhCC-eEEEEeCChHHHHHHHHHHc
Confidence 456777788887 5544 99999999999888888654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=81.53 E-value=0.67 Score=47.34 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
+...+..+++++ |++++++++|||+.+|+.+-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 567788888888 9999999999999999987654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=81.48 E-value=2.1 Score=44.52 Aligned_cols=60 Identities=13% Similarity=0.008 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhhcC---CCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKG---MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~ 831 (863)
+.......++++ | ++++++++|||+..|+.+-+.+|.. +++|..|.. ...|++++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHh
Confidence 455677777777 5 8899999999999999999999973 356655531 124556666655
Q ss_pred H
Q 002955 832 E 832 (863)
Q Consensus 832 e 832 (863)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 4
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.94 E-value=2.3 Score=42.54 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=34.0
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcC
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
.+-|..|+..+..+.+. ++.++++|||..|++..+.....+|
T Consensus 142 s~fG~dK~~vI~~l~e~-------~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-------NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcC-------CceEEEecCCcccccHhhhhhhHhh
Confidence 45688999999988764 4669999999999998888877543
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.90 E-value=0.82 Score=48.37 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~ 798 (863)
+......+++++ |++++++++|||+ ..|+..-+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 466778888888 9999999999999 599999999987
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.29 E-value=11 Score=46.21 Aligned_cols=53 Identities=13% Similarity=0.268 Sum_probs=42.8
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
....|.|+-+=|-+= .|-+++.++++.+ .+.|++|..+||-.....+.+.+++
T Consensus 569 ~E~~LtFvGlVGi~D-------PPR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-------PPRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred cccceEEEEEeeccC-------CCchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 345788887666543 4778999999995 9999999999999999999988643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 863 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 6e-60 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 6e-60 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 1e-58 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 5e-12 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 5e-12 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 8e-11 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 863 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 5e-67 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 1e-08 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 8e-08 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-06 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 3e-06 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 3e-05 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 1e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 4e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 4e-04 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 5e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 5e-04 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 6e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 7e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 7e-04 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 8e-04 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 8e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 628 bits (1621), Expect = 0.0
Identities = 144/528 (27%), Positives = 247/528 (46%), Gaps = 48/528 (9%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+++V N++ ++ G L + + L + ++ G E + E
Sbjct: 3 RLVVVSNRIAPPDEHAASAGG----------LAVGILGAL-KAAGGLWFGWSGETGN--E 49
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
+ + + + ++Y+ F LWP FHY L L +F R W
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWD 104
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
Y+ VN + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI
Sbjct: 105 GYLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEI 163
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
+ LP D LL L + DL+GF T + FL C S + V+ +S + + +G+
Sbjct: 164 FNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFR 220
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
++ P+GI ++ P K+A+L+ + K + V+ +D KG+ + LA E
Sbjct: 221 TEVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEA 279
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
LL + P GKI QIA +RG + Q+++ + RIN +G+ G+ P+ ++
Sbjct: 280 LLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQH 339
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ + ++ LVT +RDGMNL+ EY+ + A +LV+
Sbjct: 340 FDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--------------ANPGVLVL 385
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
S+F G + L+ A+ VNP++ D VA A+D AL +S AE+ RH + + +D+ +W
Sbjct: 386 SQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 445
Query: 540 SFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAY 587
F+ DL++ + F KL+++H +
Sbjct: 446 CFISDLKQIVPRSAES-----------QQRDKVATFPKLALEHHHHHH 482
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 574 bits (1482), Expect = 0.0
Identities = 90/511 (17%), Positives = 174/511 (34%), Gaps = 41/511 (8%)
Query: 57 SQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQID 116
+ + + + + +G W + + + ++ + D
Sbjct: 1 TGSEIFLASKRAAITYDTDPA-TGEPRA-WLAPGGTGNVVAEQAGVLNISWIASADSEDD 58
Query: 117 L----SEQDEVSQTLLETFKC--VPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLG 170
D V+ L + P +F + +W +Y
Sbjct: 59 RRASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPS 118
Query: 171 -GRFDRSLWQAYVSVNKIFADKVMEVISP-DDDFVWVHDYHLMVLPTFLRKRFNRVKLGF 228
G R W + + FAD +++ + D VHDY L+ +P LR++ +
Sbjct: 119 FGSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILL 178
Query: 229 FLHSPFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKR 286
F+H P+PS++ +R LP IR +L +L A IGF + R+FL + +L + R
Sbjct: 179 FVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDR 237
Query: 287 GYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 346
+ +E+ G ++ +P+G L +++ G +++ D
Sbjct: 238 EAMTVEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDP 292
Query: 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFG 406
K + A +L+ K ++ NP R + V N G
Sbjct: 293 IKNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG 350
Query: 407 RPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLG 466
V ID IA + A+ + + DG NL +E + + +
Sbjct: 351 ----SDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERD-------- 398
Query: 467 LDPSTAKSSMLVVSEFVGCSPSLSGAIR-VNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 525
+ +++SE G + L R VNP+++ AEA+ +AL ++ +
Sbjct: 399 --------ADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARR 450
Query: 526 YRYVSTHDVAYWARSFLQDLERACRDHMRRR 556
+ W ++ L L
Sbjct: 451 RDAARPWTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 5e-67
Identities = 46/255 (18%), Positives = 94/255 (36%), Gaps = 31/255 (12%)
Query: 594 AILLDYDGTIM--VPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE 651
I LDYDGT++ + + +A ++++ +L + ++V+G+ + ++ +
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 652 GLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVW 711
+ + HG + N + + + + G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGSDRFL-GVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 712 NFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMH 771
+ D +L +E + V G I+E++ GVNKG +
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 772 QKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831
+ GDD +DE FE A VG+ + AK+++ D
Sbjct: 172 ------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 213
Query: 832 EILRMLLGLAEASAQ 846
E+ ++L + Q
Sbjct: 214 EMRKILKFIEMLGVQ 228
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 79.9 bits (196), Expect = 2e-15
Identities = 101/639 (15%), Positives = 178/639 (27%), Gaps = 191/639 (29%)
Query: 116 DLSEQDEVSQTLLETFKCVPAFI-----------PPELFSK--FYHGFCKQHLWPLFHYM 162
+ E + +L F AF+ P + SK H
Sbjct: 10 ETGEHQYQYKDILSVF--EDAFVDNFDCKDVQDMPKSILSKEEIDH-------------- 53
Query: 163 LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN 222
+ +S D R W ++ V EV+ + F+ P+ + + +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 223 --RVKLGFFLHSPFPSSEIYRTLPIRDELLRALLN---ADLIGFHTFDYARHFLSCCSRM 277
R +L + + F + R P +L +ALL A + +
Sbjct: 114 EQRDRL-YNDNQVFAKYNVSRLQPY-LKLRQALLELRPAKNVLIDG-------------V 158
Query: 278 LGVSYQSKRGYIGLEYFGRTV-------SIKIL---PVGIH---IGQLQSVLNLPETEAK 324
LG G+T S K+ I + S E
Sbjct: 159 LG--------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS------PETV 198
Query: 325 VAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ----LLSQNPSKRGKIVLVQIANPA 380
+ LQ QI D I L++ +++ LL P + +VL
Sbjct: 199 LEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL------- 250
Query: 381 RGRGRDVQ--------EVQSETHATVRRINKIFGRPG--YQPVVLIDTPLQFYERIAYYV 430
+VQ + + T R + L + +
Sbjct: 251 ----LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 431 IAEC--------------------CLVTA-VRDGMNLI-PYEYIICRQGNEKLDMTL-GL 467
+ + ++ +RDG+ ++++ C + ++ +L L
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 468 DPSTAKS--SMLVVSEF---VGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQM-- 520
+P+ + L V F L I W ++ M + +
Sbjct: 367 EPAEYRKMFDRLSV--FPPSAHIPTILLSLI----WFDVIKSDVMVVV--NKLHKYSLVE 418
Query: 521 RHEKHYRYVSTHDVAYWAR---SFLQDLERACRDH---MRRRCWG--------------I 560
+ K S + + L R+ DH + I
Sbjct: 419 KQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 561 GFGL----------GFRVVALDPNFRKLSIDHIVSAYKRTKNRA-ILLD---YDGTIMVP 606
G L FR+V LD F + I H +A+ + + L Y I
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI--- 534
Query: 607 GSISTSPNAEAV--AILDNLCRDPKNVVFLVSGKDRDTL 643
P E + AILD L + +N L+ K D L
Sbjct: 535 --CDNDPKYERLVNAILDFLPKIEEN---LICSKYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 46/341 (13%), Positives = 82/341 (24%), Gaps = 128/341 (37%)
Query: 522 HEKHYRYVSTHDVAYWARSFLQDLERA------CR---DHMRRRCWGIGFGLGFRVVALD 572
H H+ T + Y + L E A C+ D +
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPK------------------ 43
Query: 573 PNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVV 632
K IDHI+ + K + + L L + +V
Sbjct: 44 SILSKEEIDHIIMS-KDAVSGTLRL-----------------------FWTLLSKQEEMV 79
Query: 633 --FLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVM 690
F+ +R NY F I
Sbjct: 80 QKFVEEV-------------------------LRINY-----------KFLMSPIK---- 99
Query: 691 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQA--------KELLDHLESVLANEPVS 742
TE S + + D + Q + L L
Sbjct: 100 ---TEQRQPSMMTRMYI------EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE---- 146
Query: 743 VKSGPNIVEVKPQGVNKG-LVAQ----HQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797
++ N++ G K + ++++ + F L + + S E + E+++
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI---FWLNLKNCNSPETVLEMLQ 203
Query: 798 SAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838
L + + S K + LR LL
Sbjct: 204 ------KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 56.1 bits (134), Expect = 1e-08
Identities = 34/239 (14%), Positives = 75/239 (31%), Gaps = 38/239 (15%)
Query: 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 645
A +R + L D DGT+ A + L + + + +V G D +AE
Sbjct: 7 AARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRS-----RVQIGVVGGSDYCKIAE 61
Query: 646 WFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKL-----------YT 694
+ + ++ + +S E + L
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 695 ETTDGSTIETKESALVWNF-----------QYADPDFGSCQAKELLDHLESVLANEPVSV 743
G+ IE + L + ++++ D ++ ++ L++ A + +
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 744 KS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRS----DEDMFEVIK 797
G +V P+G +K + D + G++ S D ++F +
Sbjct: 182 SRGGMISFDVFPEGWDKRYCLDSLDQDS------FDTIHFFGNETSPGGNDFEIFADPR 234
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 8e-08
Identities = 37/225 (16%), Positives = 61/225 (27%), Gaps = 24/225 (10%)
Query: 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFS 648
+ + D DGT++ S P A + L NV V L S K +
Sbjct: 7 QQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLRE-----ANVPVILCSSKTSAEMLYLQK 61
Query: 649 SC--EGLGIAAEHGYFVRPNYGVDWETCVSVPDF--SWKQIAEPVMKLYTETTDGSTIET 704
+ +GL + AE+G ++ S +I+ + L + T
Sbjct: 62 TLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFD 121
Query: 705 KESALVWNFQYADPDFGSCQA--------------KELLDHLESVLANEPVSVKSGPNIV 750
+ E + + L + G
Sbjct: 122 DVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFW 181
Query: 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795
V K A + T Q L +GD +D + EV
Sbjct: 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV 226
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 39/206 (18%), Positives = 76/206 (36%), Gaps = 27/206 (13%)
Query: 593 RAILLDYDGTIMVP-GSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFSSC 650
R +D DG + IST E++ + K + V L+SG +
Sbjct: 6 RLAAIDVDGNLTDRDRLISTK-AIESIRSAEK-----KGLTVSLLSGNVIPVVYALK--- 56
Query: 651 EGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV 710
LGI +G N G+ ++ S+ F + ++ ++ T +I T
Sbjct: 57 IFLGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNR---- 109
Query: 711 WNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 770
++ A F E +D++ + + + +G +K A + +
Sbjct: 110 --WREASTGF--DIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKA-FA---VNKL 161
Query: 771 HQK-GMLPDFVLCIGDDRSDEDMFEV 795
+ + D +L IGD +D MF++
Sbjct: 162 KEMYSLEYDEILVIGDSNNDMPMFQL 187
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A Length = 271 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-06
Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 60/230 (26%)
Query: 570 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 629
L F +L + A N A++ ++ + E+ ++ L +D
Sbjct: 50 QLISFFPELKDEISFVAE----NGALVYEHGKQLFH----GELTRHESRIVIGELLKDK- 100
Query: 630 NVVFLVSGKDR----DTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQI 685
+ F+ G + E F +A ++ R V D+ ++I
Sbjct: 101 QLNFVACGLQSAYVSENAPEAF-------VALMAKHYHRLKP---------VKDY--QEI 142
Query: 686 AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 745
+ + K ++ + + ++D L L V S
Sbjct: 143 DDVLFKF--------SLNLPDEQI----------------PLVIDKLHVALDGIMKPVTS 178
Query: 746 GPNIVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 794
G +++ G++K + + ++ + P V+ IGD +D +M +
Sbjct: 179 GFGFIDLIIPGLHKA-NG---ISRLLKRWDLSPQNVVAIGDSGNDAEMLK 224
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 36/228 (15%)
Query: 595 ILLDYDGTIMVPGSISTSPN---AEAVAILDNLCRDPKNVVFLVSGKDR------DTLAE 645
+ D+D T P +I E L+ +D + ++ V+G D +
Sbjct: 25 VFCDFDET-YFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTG--SSIESILDKMGR 81
Query: 646 WFSSCEGLGIAAEHG---YFVRPNYGV----DWETCVSVPDFSWKQIAEPVMKLYTE--T 696
IA++ G + + W + ++ FS +++ + V +L+
Sbjct: 82 GKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINE-GFSKEKVEKLVKQLHENHNI 140
Query: 697 TDGSTIETKESALVWNFQYADPDFGSCQ---------AKELLDHLESVLANEPVSVKSGP 747
+ +S NF Y + D + + +E + N
Sbjct: 141 LLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDS 200
Query: 748 NIVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 794
V+ P G K + M +K + + + GD +D M +
Sbjct: 201 YDVDFIPIGTGKN----EIVTFMLEKYNLNTERAIAFGDSGNDVRMLQ 244
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 40/210 (19%), Positives = 71/210 (33%), Gaps = 33/210 (15%)
Query: 593 RAILLDYDGTIMVP-GSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFSSC 650
+AI +D DGTI P I EA+ ++ + + LV+G
Sbjct: 4 KAISIDIDGTITYPNRMIHEK-ALEAIRRAES-----LGIPIMLVTGNTVQFAEAAS--- 54
Query: 651 EGLGIAAEHGYFVRPNYGV----DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKE 706
+G G V + G ++ D W E + T + + +
Sbjct: 55 ILIGT---SGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRA 111
Query: 707 SALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 766
++ +E+++ L N + + VK +NKG
Sbjct: 112 GLVI-----MRETINVETVREIINEL-----NLNLVAVDSGFAIHVKKPWINKG-SG--- 157
Query: 767 LETMHQK-GMLPDFVLCIGDDRSDEDMFEV 795
+E + G+ P V +GD +D D F+V
Sbjct: 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKV 187
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 726 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 781
+++ ++ + V+S P +EV + +KG + G+ D V+
Sbjct: 165 EQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQ-------LGLTADDVM 217
Query: 782 CIGDDRSDEDMFEV 795
+GD +D M +
Sbjct: 218 TLGDQGNDLTMIKY 231
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 726 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 785
+ L L + +S P +E+ PQG++K ++ L + GM + V+ IGD
Sbjct: 165 IPVESELCIRLQGKINVFRSEPYFLELVPQGIDKA-LSLSVL--LENIGMTREEVIAIGD 221
Query: 786 DRSDEDMFEV 795
+D M +
Sbjct: 222 GYNDLSMIKF 231
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 Length = 288 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 36/232 (15%), Positives = 70/232 (30%), Gaps = 37/232 (15%)
Query: 570 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 629
+ F L I V + N A++ D +G + +I A IL +
Sbjct: 50 DVMSIFEPLGIKTWVISA----NGAVIHDPEGRLYHHETI---DKKRAYDILS-WLES-E 100
Query: 630 NVVFLVSGKDRDTLAEWFSSCEGLG-IAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEP 688
N + V ++ G + E F N D + + Q
Sbjct: 101 NYYYEVFTGSA-----IYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFA 155
Query: 689 VMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV-KSGP 747
+ + E E E +N ++L + E +++ S
Sbjct: 156 YINSFQEL-----FEADEPIDFYNILGFSFF-----KEKLEAGWKRYEHAEDLTLVSSAE 205
Query: 748 NIVEVKPQGVNKGL----VAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795
+ E+ + +KG +A+ + + +GD +D+ M E
Sbjct: 206 HNFELSSRKASKGQALKRLAKQ-------LNIPLEETAAVGDSLNDKSMLEA 250
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 16/81 (19%)
Query: 726 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 781
+ + + + + +KS P +E+ + VNKG +A G+ P+ ++
Sbjct: 166 DQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADV-------LGIKPEEIM 218
Query: 782 CIGDDRSDEDMFEVIKSAAAG 802
IGD +D M E AG
Sbjct: 219 AIGDQENDIAMIE-----YAG 234
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 715 YADPDFGSCQAKELLDHLESVLAN--EPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMH 771
+ DP ++D L +L PV V S V++ PQ NKG + + +
Sbjct: 120 HLDPQ----ACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKG----NATQYLQ 171
Query: 772 QK-GMLPDFVLCIGDDRSDEDMFE 794
Q M P L GD +D +FE
Sbjct: 172 QHLAMEPSQTLVCGDSGNDIGLFE 195
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 726 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 781
K ++ +L+ N+ + EV G +K + +H + D VL
Sbjct: 192 KTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKH-------YNISNDQVL 244
Query: 782 CIGDDRSDEDMFEV 795
+GD +D M
Sbjct: 245 VVGDAENDIAMLSN 258
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 7e-04
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 726 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 781
EL + L + KS P +E+ P+ V+KG + + + ++
Sbjct: 158 DELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRER-------MNWKKEEIV 210
Query: 782 CIGDDRSDEDMFEV 795
GD+ +D MFE
Sbjct: 211 VFGDNENDLFMFEE 224
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} Length = 304 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 51/227 (22%)
Query: 570 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 629
L +F N A ++ + +++ + +I+ +
Sbjct: 84 QLREHFPDCHEQLTFVGE----NGANIISKNQSLIE----VFQQREDIASIIYFIEEKYP 135
Query: 630 NVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689
V +SG+ + L + S + P + V FS E
Sbjct: 136 QAVIALSGEKKGYLKKGVSE--------NIVKMLSPFF----PVLELVNSFS-PLPDERF 182
Query: 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS-VKSGPN 748
KL T++ KE +++ + ++ + SG
Sbjct: 183 FKL--------TLQVKEEES----------------AQIMKAIADYKTSQRLVGTASGFG 218
Query: 749 IVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 794
+++ +G++KG A L+ + ++ D ++ GD +D +M +
Sbjct: 219 YIDIITKGLHKG-WA---LQQLLKRWNFTSDHLMAFGDGGNDIEMLK 261
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246 | Back alignment and structure |
|---|
Score = 41.1 bits (95), Expect = 8e-04
Identities = 33/228 (14%), Positives = 60/228 (26%), Gaps = 28/228 (12%)
Query: 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS- 649
K +L D DGT+ P T + R V V G D E
Sbjct: 3 KRVLLLFDVDGTLTPPRLCQTDEMRALIKRA----RGAGFCVGTVGGSDFAKQVEQLGRD 58
Query: 650 --CEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQ------IAEPVMKLYTETTDGST 701
+ + AE+G N + + + + L G+
Sbjct: 59 VLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTF 118
Query: 702 IETKESALVWNFQYADPDFGSCQAKELLDHL------------ESVLANEPVSVKSGPNI 749
+E + + + + E+ D+ S G
Sbjct: 119 VEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQIS 178
Query: 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797
+V P G +K Q + + D G+ D +++ +
Sbjct: 179 FDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGN---DYEIYTDKR 223
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.95 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.93 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.92 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.91 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.9 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.9 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.9 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.89 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.89 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.89 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.89 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.88 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.88 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.88 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.88 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.88 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.87 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.87 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.87 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.87 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.86 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.85 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.85 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.85 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.85 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.84 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.8 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.79 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.76 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.76 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.72 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.66 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.64 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.64 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.62 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.59 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.51 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.49 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.44 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.44 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.43 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.41 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.39 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.36 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.36 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.35 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.34 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.33 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.23 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.2 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.19 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.16 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.15 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.14 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.14 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.13 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.1 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.09 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.09 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.08 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.08 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.04 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.0 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.0 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.99 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.96 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.95 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.95 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.92 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.91 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.91 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.91 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.91 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.9 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.89 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.89 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.89 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.86 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.86 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.85 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.83 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.83 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.82 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.81 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.8 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.79 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.79 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.78 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.77 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.77 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.75 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.75 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.75 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.74 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.72 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.72 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.71 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.7 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.67 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.66 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.65 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.65 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.64 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.63 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.63 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.63 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.63 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.61 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.59 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.59 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.57 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.54 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.54 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.51 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.51 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.5 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.5 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.46 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.43 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.4 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.39 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 98.31 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.29 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.27 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.27 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.25 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.24 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.23 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.18 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.16 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.14 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.12 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.12 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.97 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.95 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.93 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.86 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.81 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.8 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.77 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.7 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.68 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.66 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 97.64 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.62 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.59 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.57 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.5 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.39 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.3 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.27 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.23 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.03 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.01 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 95.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 96.81 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.79 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.75 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 96.71 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.67 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.58 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 96.54 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.31 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.8 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.2 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.14 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.01 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 94.92 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.7 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 94.6 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.59 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 94.29 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 94.14 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.11 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 93.46 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 92.4 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 90.03 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 89.75 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 88.81 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.26 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 87.85 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 87.66 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 87.63 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 87.14 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 86.97 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 86.78 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 86.15 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 85.85 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 84.28 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 83.46 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 83.23 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 83.08 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 83.02 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 82.54 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 82.53 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-108 Score=936.71 Aligned_cols=460 Identities=18% Similarity=0.295 Sum_probs=407.3
Q ss_pred CCcEEEEEcCCccceeeCCCCCCCe---EEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhh----hHHHh--hc
Q 002955 58 QERMIIVGNQLPLRAHRSSDGSGGW---TFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD----EVSQT--LL 128 (863)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~----~~~~~--~~ 128 (863)
..++||||||||+.+++++++ |+| .++.++|||+++|.+.+ +++||||.+.+.+.+..+ .+... ..
T Consensus 2 ~~~livvsnR~P~~~~~~~~~-g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~~ 76 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPAT-GEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDRRASALNPDGVTMELHSG 76 (496)
T ss_dssp --CEEEEESCCCEEEEECTTT-CSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHHHHHHHCTTCEEEECTTS
T ss_pred CCCEEEEECCCCeeEEEecCC-CceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccchhhhhccccccccccccC
Confidence 468999999999999998333 676 67778899999998754 789999998754322111 11111 25
Q ss_pred cCceEEEeeCChHhHhhHhhhccccccccccccCCC--CCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCC-CCCEEEE
Q 002955 129 ETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLP--LSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISP-DDDFVWV 205 (863)
Q Consensus 129 ~~~~~~pv~l~~~~~~~~y~gf~~~~lWpl~H~~~~--~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p-~~D~Vwv 205 (863)
++|+|+||+|+++++++||+||||++|||+|||+++ ..|+. .+|+++.|++|++||++||++|++.+++ ++|+|||
T Consensus 77 ~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwV 155 (496)
T 3t5t_A 77 REILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLV 155 (496)
T ss_dssp CEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEE
T ss_pred CCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 689999999999999999999999999999999853 33433 3566789999999999999999999952 4699999
Q ss_pred eCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCC--ChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhh-Ccee
Q 002955 206 HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYARHFLSCCSRML-GVSY 282 (863)
Q Consensus 206 hDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp--~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~l-g~~~ 282 (863)
||||||+||.|||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||++||+|++ |+++
T Consensus 156 hDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~ 235 (496)
T 3t5t_A 156 HDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARI 235 (496)
T ss_dssp ESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEE
T ss_pred eCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999 7999999999999999999999999999999999 9887
Q ss_pred cccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHH
Q 002955 283 QSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLS 362 (863)
Q Consensus 283 ~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~ 362 (863)
....+ .+.++||+++|.++|+|||++.|.+... +. .++++++++++++||+|||+|+.|||..+|+|| +||+
T Consensus 236 ~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 236 DREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp ETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 66554 5899999999999999999999986543 11 256788888999999999999999999999999 9999
Q ss_pred hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeeccccc
Q 002955 363 QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRD 442 (863)
Q Consensus 363 ~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~E 442 (863)
+||+++ +++|||||.|+|+++++|+++++++++++++||.+||.. ||+++ +.++.+|+.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999986 78766 5789999999999999999999999
Q ss_pred CCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHH
Q 002955 443 GMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMR 521 (863)
Q Consensus 443 GmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r 521 (863)
|||||++|||||+. ++||+|+|||+|++++| .+|++|||||++++|+||.++|+||++||+.|
T Consensus 383 GfgLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r 446 (496)
T 3t5t_A 383 GQNLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEA 446 (496)
T ss_dssp SCCSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCChhHHHHHHhCC----------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999953 36899999999999999 57999999999999999999999999999999
Q ss_pred HHHHhhhhccCCHHHHHHHHHHHHHHHHHhh
Q 002955 522 HEKHYRYVSTHDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 522 ~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 552 (863)
+++++++|.+||+.+|+++|+++|..+...+
T Consensus 447 ~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 447 AARRRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 9999999999999999999999999876543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-92 Score=818.99 Aligned_cols=453 Identities=30% Similarity=0.565 Sum_probs=413.9
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeC
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 138 (863)
+|+||||||||+... + +.+.|||+++|.+.+. +.+++||||+|.. ++ +++.+.+.+.++|+|+||||
T Consensus 2 ~~livvsnr~p~~~~--------~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l 68 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE--------H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNL 68 (482)
T ss_dssp CCEEEEEEECCCCC--------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEE
T ss_pred CCEEEEECCCCCCCC--------C--CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEEC
Confidence 589999999999721 1 2467899999988664 5799999999865 32 33334444567899999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
++++++.||+||||++|||+|||+++. ..|+++.|++|+++|+.||+++.+.+++ +|+|||||||++++|.+||
T Consensus 69 ~~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr 142 (482)
T 1uqt_A 69 SEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELR 142 (482)
T ss_dssp CHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHH
T ss_pred CHHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999865 4899999999999999999999999987 5999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+.... + .+.++|+.+
T Consensus 143 ~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~ 219 (482)
T 1uqt_A 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAF 219 (482)
T ss_dssp HTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEE
T ss_pred HhCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876553 2 367889999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
+|.++|+|||++.|......++..+ .+++++++.++++|++|||+++.||+..+|+||++|++++|+++++++|||||.
T Consensus 220 ~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~ 298 (482)
T 1uqt_A 220 RTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (482)
T ss_dssp EEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECC
T ss_pred EEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEEC
Confidence 9999999999999986654454444 677889998999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|+|+++++|+++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 299 p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~- 377 (482)
T 1uqt_A 299 TSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (482)
T ss_dssp BCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT-
T ss_pred CCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++|+..|+
T Consensus 378 -------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a 444 (482)
T 1uqt_A 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 444 (482)
T ss_dssp -------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred -------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 2358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002955 539 RSFLQDLERA 548 (863)
Q Consensus 539 ~~~l~~l~~~ 548 (863)
++|++.|+++
T Consensus 445 ~~~l~~l~~~ 454 (482)
T 1uqt_A 445 ECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=250.49 Aligned_cols=222 Identities=20% Similarity=0.295 Sum_probs=165.1
Q ss_pred cceeEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCce
Q 002955 592 NRAILLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~ 669 (863)
+|+|++||||||++... ..+.++++++++|++| ++.| .|+|+|||+...+.+++..+ +++|++||+.|+.++..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHH-hcCC-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCCee
Confidence 48999999999998421 2457999999999998 6778 99999999999999999776 78999999999885433
Q ss_pred eEEee-cCCCCccH-HHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECC
Q 002955 670 DWETC-VSVPDFSW-KQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGP 747 (863)
Q Consensus 670 ~w~~~-~~~~~~~w-~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~ 747 (863)
.|... + ....+ .+.+..+++... ..++.+++.+...+.++|+..++ +.....+++.+.+.+. . .+.+.++.
T Consensus 77 ~~~~~~~--~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~~ 149 (239)
T 1u02_A 77 VYNNGSD--RFLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYGK 149 (239)
T ss_dssp EECTTGG--GGHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEECS
T ss_pred eeccccc--ccchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-C--CcEEEeCC
Confidence 22200 0 01111 123344444333 34567777777777788876532 2112233444444442 2 24567889
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh--hhhcCCCCCCCCcceEEEEeCCCccccce
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKPSKAKY 825 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~s~A~y 825 (863)
.++||+|+++|||.|+++|++++ | ++||||+.||++||+.+ |. +|+||+.++.|+|
T Consensus 150 ~~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g~--------------~vam~Na~~~A~~ 207 (239)
T 1u02_A 150 MIIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDAL--------------TIKVGEGETHAKF 207 (239)
T ss_dssp SEEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTSE--------------EEEESSSCCCCSE
T ss_pred cEEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCCc--------------EEEECCCCCcceE
Confidence 99999999999999999999988 6 99999999999999999 74 7889999999999
Q ss_pred ecCC---HhHHHHHHHHHHHhhcC
Q 002955 826 YLDD---TAEILRMLLGLAEASAQ 846 (863)
Q Consensus 826 ~l~d---~~eV~~~L~~L~~~~~~ 846 (863)
++.+ .++|.++|+++......
T Consensus 208 v~~~~~~~~gV~~~l~~~~~~~~~ 231 (239)
T 1u02_A 208 HVADYIEMRKILKFIEMLGVQKKQ 231 (239)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHC-
T ss_pred EeCCCCCHHHHHHHHHHHHHhccc
Confidence 9988 88999999998765443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=245.37 Aligned_cols=229 Identities=18% Similarity=0.207 Sum_probs=162.2
Q ss_pred HHHHhcccceeEecCCccccCCCCCCC-CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-CCceEEccCcEE
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSIST-SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-EGLGIAAEHGYF 662 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~-~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~~l~liaenGa~ 662 (863)
..|..+++|+|+|||||||++ +.+ .++++++++|+++ ++.|+.|+++|||+...+..++..+ ...++++.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 578999999999999999998 566 8999999999998 7889999999999999999998876 346899999999
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhc----------CCCceeeecccee--------Eee------cccC--
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTET----------TDGSTIETKESAL--------VWN------FQYA-- 716 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~----------~~gs~ie~k~~~l--------~~~------y~~~-- 716 (863)
+...+...+...++ . +.+.++++.+.+. ..+.+........ ... +...
T Consensus 90 i~~~~~~i~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPMD---E---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCCC---H---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEecCC---H---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 99876655554332 1 2233333333322 1122221110000 000 0000
Q ss_pred CCC-----c-chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchH
Q 002955 717 DPD-----F-GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDE 790 (863)
Q Consensus 717 d~~-----~-~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~ 790 (863)
.+. + ......++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHH
Confidence 000 0 11223444555655565544567789999999999999999999999999 99999999999999999
Q ss_pred HHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHH
Q 002955 791 DMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 840 (863)
Q Consensus 791 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L 840 (863)
+||+.+|. +|+||+. +..|+|++.+ .++|.++|+++
T Consensus 241 ~ml~~ag~--------------~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAGI--------------SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSSE--------------EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHhCCC--------------EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 99999985 5777764 5789999864 56799999875
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-26 Score=243.59 Aligned_cols=230 Identities=14% Similarity=0.144 Sum_probs=156.4
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEE
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFV 663 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I 663 (863)
.+|+.+++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+. ...+++.||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 689999999999999999999 7889999999999998 88899999999999999999887662 456899999999
Q ss_pred EeCCc-eeEEeecCCCCccHHHHHHHHHHHHhhcCC---------CceeeeccceeEeec------------ccC-CCC-
Q 002955 664 RPNYG-VDWETCVSVPDFSWKQIAEPVMKLYTETTD---------GSTIETKESALVWNF------------QYA-DPD- 719 (863)
Q Consensus 664 ~~~~~-~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~---------gs~ie~k~~~l~~~y------------~~~-d~~- 719 (863)
....+ ..+...+ + .+.+..+++.+..... +.+.......+...+ ... ...
T Consensus 90 ~~~~~~~l~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 163 (285)
T 3pgv_A 90 HDSDGQQIFAHNL---D---RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGI 163 (285)
T ss_dssp ECTTSCEEEECCC---C---HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSE
T ss_pred ECCCCCEEEecCC---C---HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCc
Confidence 86433 3333322 1 2334444442211110 111100000000000 000 000
Q ss_pred -------cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHH
Q 002955 720 -------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 792 (863)
Q Consensus 720 -------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 792 (863)
.......++.+.+.+.+......+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++|
T Consensus 164 ~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~m 240 (285)
T 3pgv_A 164 SKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAEM 240 (285)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHH
T ss_pred eEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhHHH
Confidence 011234455566666555444456778999999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce--ec--CCHhHHHHHHHHHH
Q 002955 793 FEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY--YL--DDTAEILRMLLGLA 841 (863)
Q Consensus 793 f~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~ 841 (863)
|+.+|. +|+||+. +..|+| ++ ++.++|.++|+++.
T Consensus 241 l~~ag~--------------~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 241 LSMAGK--------------GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHSSE--------------EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHhcCC--------------EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 999986 5777764 466775 44 46788999999875
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=236.15 Aligned_cols=229 Identities=17% Similarity=0.188 Sum_probs=159.8
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC----CceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE----GLGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~----~l~liaenGa~I~~ 665 (863)
|++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+.+++..+. ...+++.||+.+..
T Consensus 3 M~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~ 78 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTN---SKKEISSRNRETLIRI-QEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIIN 78 (279)
T ss_dssp -CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEE
T ss_pred CcceEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEE
Confidence 5689999999999999 7889999999999998 77899999999999999999987763 36789999999986
Q ss_pred C--CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeE----------------eecccCC--------CC
Q 002955 666 N--YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV----------------WNFQYAD--------PD 719 (863)
Q Consensus 666 ~--~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~----------------~~y~~~d--------~~ 719 (863)
. +...+...++. + .+.++++.+.+..-...+........ ..+...+ +.
T Consensus 79 ~~~~~~~~~~~l~~---~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 4dw8_A 79 WESKEMMYENVLPN---E---VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPV 152 (279)
T ss_dssp TTTCCEEEECCCCG---G---GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCC
T ss_pred CCCCeEEEEecCCH---H---HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCc
Confidence 3 33333333222 2 12333333322110000000000000 0000000 00
Q ss_pred ------cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHH
Q 002955 720 ------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMF 793 (863)
Q Consensus 720 ------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 793 (863)
.......++.+.+.+.+......+.++..++||+|+++|||.+++++++++ |++++++++|||+.||++||
T Consensus 153 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~ 229 (279)
T 4dw8_A 153 AKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMI 229 (279)
T ss_dssp SCEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHH
Confidence 011234555666666665555667788999999999999999999999999 99999999999999999999
Q ss_pred HHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHHHhhc
Q 002955 794 EVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLAEASA 845 (863)
Q Consensus 794 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~~~~ 845 (863)
+.+|. +|+||+. +..|+|++. +.++|.++|+++.....
T Consensus 230 ~~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~ 273 (279)
T 4dw8_A 230 KFAGM--------------GVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVEG 273 (279)
T ss_dssp HHSSE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC----
T ss_pred HHcCc--------------EEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhccc
Confidence 99985 5777764 477999986 46789999999876543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=237.72 Aligned_cols=229 Identities=18% Similarity=0.267 Sum_probs=162.5
Q ss_pred HhcccceeEecCCccccCCCCCCCCCCHH-HHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEe
Q 002955 588 KRTKNRAILLDYDGTIMVPGSISTSPNAE-AVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRP 665 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~~~~~~~s~~-~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~ 665 (863)
..|++|+|+||+||||++ ..+.+++. +.++|+++ +++|+.|+++|||+...+..++..+. ..++++.||+.+..
T Consensus 33 ~~M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~ 108 (304)
T 3l7y_A 33 GSMSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIIS 108 (304)
T ss_dssp ---CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEE
T ss_pred CceeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEE
Confidence 346799999999999999 78889998 89999998 77899999999999999999887663 46899999999987
Q ss_pred CCceeEEeecCCCCccHHHHHHHHHHHHhhcC----------CCceeeeccc------------ee--EeecccC-CCC-
Q 002955 666 NYGVDWETCVSVPDFSWKQIAEPVMKLYTETT----------DGSTIETKES------------AL--VWNFQYA-DPD- 719 (863)
Q Consensus 666 ~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~----------~gs~ie~k~~------------~l--~~~y~~~-d~~- 719 (863)
.+...+...++ .+.+.++++.+.+.. .+.|...... .. .-.+.+. ...
T Consensus 109 ~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 182 (304)
T 3l7y_A 109 KNQSLIEVFQQ------REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERF 182 (304)
T ss_dssp TTEEEEECCCC------HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCE
T ss_pred CCEEEEEecCC------HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCe
Confidence 66555544322 123344444443311 1111111000 00 0000000 000
Q ss_pred ------cchhhHHHHHHHHHHHhcC-CCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHH
Q 002955 720 ------FGSCQAKELLDHLESVLAN-EPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 792 (863)
Q Consensus 720 ------~~~~~a~el~~~L~~~l~~-~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 792 (863)
.......++.+.+.+.+.+ ....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++|
T Consensus 183 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m 259 (304)
T 3l7y_A 183 FKLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEM 259 (304)
T ss_dssp EEEEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHH
T ss_pred EEEEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHH
Confidence 0112345666666655554 33456678899999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHHHh
Q 002955 793 FEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEA 843 (863)
Q Consensus 793 f~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~ 843 (863)
|+.+|. +|+||+. +..|+|++.+ .++|.++|+++...
T Consensus 260 ~~~ag~--------------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 260 LKLAKY--------------SYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp HHHCTE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred HHhcCC--------------eEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 999986 5677764 5789999865 56799999998753
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=231.23 Aligned_cols=227 Identities=13% Similarity=0.149 Sum_probs=159.1
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-C
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~ 667 (863)
|++|+|+||+||||++ +.+.+++.+.++|+++ ++.|+.|+++|||+...+..++..+. ..++++.||+.+... +
T Consensus 4 M~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~ 79 (290)
T 3dnp_A 4 MSKQLLALNIDGALLR---SNGKIHQATKDAIEYV-KKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKID 79 (290)
T ss_dssp --CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTT
T ss_pred CcceEEEEcCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCC
Confidence 5689999999999999 7889999999999998 77899999999999999988887763 348999999999863 3
Q ss_pred ceeEEeecCCCCccHHHHHHHHHHHHhhcCC--------Cceeeecccee-----------------EeecccC------
Q 002955 668 GVDWETCVSVPDFSWKQIAEPVMKLYTETTD--------GSTIETKESAL-----------------VWNFQYA------ 716 (863)
Q Consensus 668 ~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~--------gs~ie~k~~~l-----------------~~~y~~~------ 716 (863)
...+...++ .+.+.++++.+.+..- +.+........ ...+...
T Consensus 80 ~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (290)
T 3dnp_A 80 APFFEKRIS------DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMD 153 (290)
T ss_dssp SCSEECCCC------HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHH
T ss_pred CEEEecCCC------HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhc
Confidence 333333221 3445566665544211 11111100000 0000000
Q ss_pred -C-CC------cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcc
Q 002955 717 -D-PD------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRS 788 (863)
Q Consensus 717 -d-~~------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~N 788 (863)
. +. .......++.+.+... ......+.++..++||+|+++|||.|++++++++ |++++++++|||+.|
T Consensus 154 ~~~~~~ki~~~~~~~~~~~~~~~l~~~-~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~N 229 (290)
T 3dnp_A 154 EPVSAPVIEVYTEHDIQHDITETITKA-FPAVDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYD 229 (290)
T ss_dssp SCCCCSEEEEECCGGGHHHHHHHHHHH-CTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGG
T ss_pred CCCCceEEEEeCCHHHHHHHHHHHHhh-CCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchh
Confidence 0 00 0112334455555322 2223455678999999999999999999999999 999999999999999
Q ss_pred hHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHHHhh
Q 002955 789 DEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLAEAS 844 (863)
Q Consensus 789 D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~~~ 844 (863)
|++||+.+|. +|+||+. +..|+|++. +.++|.++|+++....
T Consensus 230 Di~m~~~ag~--------------~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~ 277 (290)
T 3dnp_A 230 DLPMIELAGL--------------GVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQ 277 (290)
T ss_dssp GHHHHHHSSE--------------EEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHH
T ss_pred hHHHHHhcCC--------------EEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhc
Confidence 9999999986 5667764 578999885 4577999999988654
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=245.18 Aligned_cols=312 Identities=16% Similarity=0.153 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHHHHhh----cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCCh---hHhhc--------
Q 002955 178 WQAYVSVNKIFADKVMEV----ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT-------- 242 (863)
Q Consensus 178 w~~Y~~vN~~fa~~i~~~----~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~-------- 242 (863)
+..+....+.....+... .+| |+|++|+++..+++.++++. .++|+.+.+|..++.. ..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLP--DVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP 175 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC--SEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCC
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCC--eEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccc
Confidence 344444444444444333 244 99999999998889888754 5799999999998641 11111
Q ss_pred CCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHH
Q 002955 243 LPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETE 322 (863)
Q Consensus 243 lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~ 322 (863)
.....-....+-.+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+...
T Consensus 176 ~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~ 236 (439)
T 3fro_A 176 YPDIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRD 236 (439)
T ss_dssp SSEECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHH
T ss_pred cceeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh---------------cCCceeecCCCCCchhcCcccccchhh
Confidence 111133445556799999999887776332 1111 112456799999999887543333345
Q ss_pred HHHHHHHHHh--CCCeEEEeecCcc-cccCHHHHHHHHHHHHHhC--CCCCCceEEEEEecCCCCCchhHHHHHHHHHHH
Q 002955 323 AKVAELQDQF--KGQIVMLGVDDMD-IFKGISLKLLAMEQLLSQN--PSKRGKIVLVQIANPARGRGRDVQEVQSETHAT 397 (863)
Q Consensus 323 ~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~--p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l 397 (863)
.....+++++ .++.+|+++||+. +.||+..+++|++++.+++ |+++ |+.+|.. + .++.++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~g-----~--~~~~~~l~~~ 305 (439)
T 3fro_A 237 ERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKG-----D--PELEGWARSL 305 (439)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECCC-----C--HHHHHHHHHH
T ss_pred hhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcCC-----C--hhHHHHHHHH
Confidence 5566777777 3449999999999 9999999999999998876 6655 8888832 2 2344556666
Q ss_pred HHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccE
Q 002955 398 VRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 477 (863)
Q Consensus 398 ~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 477 (863)
+++.+ .++++.|.++.+++..+|+.||++|+||..||||++++|||+| |.|+
T Consensus 306 ~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~Pv 357 (439)
T 3fro_A 306 EEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIP 357 (439)
T ss_dssp HHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-------------------TCEE
T ss_pred HhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC-------------------CCCe
Confidence 55542 3677889999999999999999999999999999999999999 6789
Q ss_pred EecccccCcccC--CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHH
Q 002955 478 VVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACR 550 (863)
Q Consensus 478 VlSe~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 550 (863)
|+|+.+|..+.+ ..|++++|.|++++|++|.+++++.++.++...++.++++..+++..+++++++-++++.+
T Consensus 358 i~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 358 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp EEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred EEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 999999988888 3589999999999999999999955566666677788888889999999999888776543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=228.39 Aligned_cols=223 Identities=16% Similarity=0.212 Sum_probs=154.8
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCcee
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~ 670 (863)
++|+|+||+||||++ +.+.+++.+.++|+++ +++|+.|+++|||+...+..++..+..-.+++.||+.+...+...
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 79 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL 79 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHH-HHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence 479999999999999 6788999999999998 788999999999999999998877654468899999998776555
Q ss_pred EEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeE----------------------ee-----------ccc--
Q 002955 671 WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV----------------------WN-----------FQY-- 715 (863)
Q Consensus 671 w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~----------------------~~-----------y~~-- 715 (863)
+...++ .+.+.++++.+.+..-...+........ |. ..+
T Consensus 80 ~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3fzq_A 80 YNQSFN------QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYK 153 (274)
T ss_dssp EECCCC------HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCS
T ss_pred EEcCCC------HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhc
Confidence 554332 1233444443332111111111000000 00 000
Q ss_pred CCCC--cchhhHHHHHHHHHHHhcCCCeEEEECC--cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHH
Q 002955 716 ADPD--FGSCQAKELLDHLESVLANEPVSVKSGP--NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDED 791 (863)
Q Consensus 716 ~d~~--~~~~~a~el~~~L~~~l~~~~~~v~~g~--~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~ 791 (863)
..+- +......+..+.+.+.+......+.++. .++||.|++++||.+++++++++ |++++++++|||+.||++
T Consensus 154 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 154 SQDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIV 230 (274)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHH
T ss_pred ccCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHH
Confidence 0000 0000112233344444443323445566 99999999999999999999999 999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHH
Q 002955 792 MFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 840 (863)
Q Consensus 792 Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L 840 (863)
||+.+|. +|+||+. +..|+|++.+ .++|.++|+++
T Consensus 231 m~~~ag~--------------~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 231 MFQASDV--------------TIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHTCSE--------------EEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHHhcCc--------------eEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999985 5777774 4789999864 57899999886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=232.04 Aligned_cols=233 Identities=13% Similarity=0.096 Sum_probs=134.7
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC----CceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE----GLGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~----~l~liaenGa~I~~ 665 (863)
|++|+|+||+||||++ +.+.+++.++++|+++ +++|+.|+++|||+...+.+++..+. ...++++||+.+..
T Consensus 3 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~ 78 (279)
T 3mpo_A 3 LTIKLIAIDIDGTLLN---EKNELAQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQT 78 (279)
T ss_dssp --CCEEEECC--------------CHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEE
T ss_pred cceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEEC
Confidence 5689999999999999 7889999999999998 77899999999999999999987762 23699999994433
Q ss_pred CCce-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeE-------------------e---ecccC---CCC
Q 002955 666 NYGV-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV-------------------W---NFQYA---DPD 719 (863)
Q Consensus 666 ~~~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~-------------------~---~y~~~---d~~ 719 (863)
..+. .+...+ + .+.+.++++.+.+..-...+........ . ...+. .+-
T Consensus 79 ~~~~~~~~~~~---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 3mpo_A 79 ISGKVLTNHSL---T---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTI 152 (279)
T ss_dssp TTSCEEEECCC---C---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCC
T ss_pred CCCCEEEecCC---C---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCc
Confidence 3333 232222 1 2334444444433211111111000000 0 00000 000
Q ss_pred c------chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHH
Q 002955 720 F------GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMF 793 (863)
Q Consensus 720 ~------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 793 (863)
. ......++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||
T Consensus 153 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~ 229 (279)
T 3mpo_A 153 SKAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMI 229 (279)
T ss_dssp CEEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHH
Confidence 0 11223344444443333323456678899999999999999999999999 99999999999999999999
Q ss_pred HHhhhhcCCCCCCCCcceEEEEeCCCccccceecC--CHhHHHHHHHHHHHhhc
Q 002955 794 EVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRMLLGLAEASA 845 (863)
Q Consensus 794 ~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~--d~~eV~~~L~~L~~~~~ 845 (863)
+.+|.+++++|.++ ..+..|+|++. +.++|+++|+++.....
T Consensus 230 ~~ag~~vam~na~~----------~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~ 273 (279)
T 3mpo_A 230 KYAGLGVAMGNAID----------EVKEAAQAVTLTNAENGVAAAIRKYALNEG 273 (279)
T ss_dssp HHSTEECBC---CC----------HHHHHCSCBC------CHHHHHC-------
T ss_pred HhcCceeeccCCCH----------HHHHhcceeccCCCccHHHHHHHHHhcccC
Confidence 99997543322111 12577899875 56779999999876544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=223.37 Aligned_cols=227 Identities=19% Similarity=0.263 Sum_probs=162.1
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHH-HHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEA-VAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~-~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~ 667 (863)
|++|+|++||||||++ .++.+++++ +++|++| +++|+.|+|||||+...+.+++..+. ..++|++||+.+...+
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~ 76 (271)
T 1rlm_A 1 MAVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHG 76 (271)
T ss_dssp -CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETT
T ss_pred CCccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECC
Confidence 4579999999999999 678899995 9999998 78899999999999999988887653 4579999999998765
Q ss_pred ceeEEeecCCCCccHHHHHHHHHHHHhhcC---------CCceeeeccc------------eeEe--ecccCC-CC----
Q 002955 668 GVDWETCVSVPDFSWKQIAEPVMKLYTETT---------DGSTIETKES------------ALVW--NFQYAD-PD---- 719 (863)
Q Consensus 668 ~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~---------~gs~ie~k~~------------~l~~--~y~~~d-~~---- 719 (863)
...+...++ .+.+.++++.+.+.. .+.+...... .+.. .+.... +.
T Consensus 77 ~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 150 (271)
T 1rlm_A 77 KQLFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFS 150 (271)
T ss_dssp EEEEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEE
T ss_pred eEEEEecCC------HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEE
Confidence 544443322 234455555444321 1222211000 0000 001000 00
Q ss_pred --cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 720 --FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 720 --~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
.......++.+++.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.||++||+.+|
T Consensus 151 i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag 227 (271)
T 1rlm_A 151 LNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMAR 227 (271)
T ss_dssp EECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCS
T ss_pred EEcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcC
Confidence 011335566677766555444455678889999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHHHh
Q 002955 798 SAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEA 843 (863)
Q Consensus 798 ~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~ 843 (863)
. +|+||+. +..|+|++.+ .++|.++|+++...
T Consensus 228 ~--------------~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 228 Y--------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp E--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred C--------------eEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 6 4567664 3679999865 56799999998753
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-24 Score=228.84 Aligned_cols=231 Identities=14% Similarity=0.191 Sum_probs=154.8
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC----ceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG----LGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~----l~liaenGa~I~~ 665 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|++||||+...+..++..+.- ..++++||+.|..
T Consensus 3 mm~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l-~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~ 78 (282)
T 1rkq_A 3 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 78 (282)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred ccceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEE
Confidence 4589999999999999 6788999999999998 788999999999999999998877632 2589999999988
Q ss_pred --CCceeEEeecCCCCccHHHHHHHHHHHHhh-----cCCCceeeecc---c--------eeEee---cccC--CCCc--
Q 002955 666 --NYGVDWETCVSVPDFSWKQIAEPVMKLYTE-----TTDGSTIETKE---S--------ALVWN---FQYA--DPDF-- 720 (863)
Q Consensus 666 --~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~-----~~~gs~ie~k~---~--------~l~~~---y~~~--d~~~-- 720 (863)
.+...+...++ .++...+...++.+.- ...+.+...+. . .+... +.+. +...
T Consensus 79 ~~~~~~i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 155 (282)
T 1rkq_A 79 AADGSTVAQTALS---YDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLK 155 (282)
T ss_dssp TTTCCEEEECCBC---HHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCE
T ss_pred CCCCeEEEEecCC---HHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceE
Confidence 44444554332 2222222222222210 01122222110 0 00000 0110 0000
Q ss_pred -----chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 721 -----GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 721 -----~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
......++.+.+.+.+......+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.
T Consensus 156 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~ 232 (282)
T 1rkq_A 156 VMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEY 232 (282)
T ss_dssp EEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHH
Confidence 01122333333333232222344578889999999999999999999999 9999999999999999999999
Q ss_pred hhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHHHhh
Q 002955 796 IKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEAS 844 (863)
Q Consensus 796 ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~~ 844 (863)
+|. +|+||+. +..|+|++.+ .++|+++|+++....
T Consensus 233 ag~--------------~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~ 273 (282)
T 1rkq_A 233 AGV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNE 273 (282)
T ss_dssp SSE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC-
T ss_pred CCc--------------EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcC
Confidence 985 5667664 3578998864 678999999986443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=222.31 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=151.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCce
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~ 669 (863)
|++|+|+||+||||++ +.+.+++.++++|+++ ++.|+.|+++|||+...+..++..+.-..+++.||+++...+..
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~ 76 (258)
T 2pq0_A 1 MGRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRL-KQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNV 76 (258)
T ss_dssp -CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEE
T ss_pred CCceEEEEeCCCCCcC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEE
Confidence 3579999999999999 6788999999999998 88899999999999999888887653234789999999876654
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcC--------CCceeeecc-cee-------EeecccCCCCc-------c--hhh
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKE-SAL-------VWNFQYADPDF-------G--SCQ 724 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~-~~l-------~~~y~~~d~~~-------~--~~~ 724 (863)
.+...++ .+.+.++++.+.+.. .+.+..... ... ...+....+.+ . ...
T Consensus 77 i~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 150 (258)
T 2pq0_A 77 LYKQPLR------REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFC 150 (258)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECS
T ss_pred EEEecCC------HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEEC
Confidence 4443322 234444544443321 111111000 000 00000010000 0 000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCC
Q 002955 725 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPS 804 (863)
Q Consensus 725 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~ 804 (863)
.++....+.+.+.. ...+.+++.++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag~------ 220 (258)
T 2pq0_A 151 RAEEEEPYVRNYPE-FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVGT------ 220 (258)
T ss_dssp CHHHHHHHHHHCTT-EEEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSSE------
T ss_pred CHHHHHHHHHhCCC-eEEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCCc------
Confidence 01112223333322 2244567889999999999999999999999 9999999999999999999999986
Q ss_pred CCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 805 LSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 805 ~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
+|+||+. +..|+|++. +.++|.+.|+++.
T Consensus 221 --------~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 221 --------GVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp --------EEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred --------EEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 4667764 467999885 4678999998764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-24 Score=230.37 Aligned_cols=229 Identities=16% Similarity=0.188 Sum_probs=157.9
Q ss_pred HhcccceeEecCCccccCCCCC-CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh--hccC--C---ceEEccC
Q 002955 588 KRTKNRAILLDYDGTIMVPGSI-STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF--SSCE--G---LGIAAEH 659 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~~~-~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~--~~l~--~---l~liaen 659 (863)
..|++|+|++||||||++ . ++.++++++++|++| ++.|+.|++||||+...+..++ ..+. . .++|++|
T Consensus 23 ~~M~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~N 98 (301)
T 2b30_A 23 KGADIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYIN 98 (301)
T ss_dssp TTCCCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGG
T ss_pred ccccccEEEEECCCCCcC---CCCCccCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcC
Confidence 346689999999999999 6 788999999999998 7789999999999999998888 6553 2 4689999
Q ss_pred cEEEEe-CCceeEEeecCCCCccHHHHHHHHHHHHhhc----------CCCceeeecc-ce--------eEeecccC---
Q 002955 660 GYFVRP-NYGVDWETCVSVPDFSWKQIAEPVMKLYTET----------TDGSTIETKE-SA--------LVWNFQYA--- 716 (863)
Q Consensus 660 Ga~I~~-~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~----------~~gs~ie~k~-~~--------l~~~y~~~--- 716 (863)
|+.|.. .+...+...++ . +.+.++++...+. ..+.|..... .. ..++++..
T Consensus 99 Ga~i~~~~~~~i~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
T 2b30_A 99 GTIVYDQIGYTLLDETIE---T---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNE 172 (301)
T ss_dssp GTEEECTTCCEEEECCCC---H---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHH
T ss_pred CeEEEeCCCCEEEEccCC---H---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchh
Confidence 999987 44444443332 1 2233333322221 1111211100 00 00011100
Q ss_pred --C--CCc------chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC
Q 002955 717 --D--PDF------GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD 786 (863)
Q Consensus 717 --d--~~~------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~ 786 (863)
+ +-. ......++.+.+.+.+......+.++..++||+|++++||.+++++++++ |++++++++|||+
T Consensus 173 ~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~ 249 (301)
T 2b30_A 173 MLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDA 249 (301)
T ss_dssp HTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECS
T ss_pred hhccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCC
Confidence 0 100 11234455566655443322334567789999999999999999999999 9999999999999
Q ss_pred cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC-C--HhHHHHHHHHHHHh
Q 002955 787 RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD-D--TAEILRMLLGLAEA 843 (863)
Q Consensus 787 ~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~-d--~~eV~~~L~~L~~~ 843 (863)
.||++||+.+|. +|+||+. +..|+|+++ + .++|.++|+++...
T Consensus 250 ~nD~~m~~~ag~--------------~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 250 ENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp GGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC--------------eEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 999999999986 4667754 357899886 5 57899999988643
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-24 Score=225.32 Aligned_cols=223 Identities=17% Similarity=0.179 Sum_probs=149.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEE-EeCCc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV-RPNYG 668 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I-~~~~~ 668 (863)
+++|+|+||+||||++. ..+.+++++.++|+++ ++.|+.|+++|||+...+ +.+..++..++++.||+.+ ...+.
T Consensus 10 ~miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~ 85 (268)
T 3r4c_A 10 HMIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKV-HDSGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGS 85 (268)
T ss_dssp SCCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHH-HHTTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSC
T ss_pred CceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCe
Confidence 35899999999999983 3578999999999998 778999999999998887 4455555467899999999 87765
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEe--------eccc--C-CCCcch-h-------------
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVW--------NFQY--A-DPDFGS-C------------- 723 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~--------~y~~--~-d~~~~~-~------------- 723 (863)
..+...++ .+.+.++++.+.+..-...+......... .++. . .+.... .
T Consensus 86 ~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3r4c_A 86 VIRKVAIP------AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCF 159 (268)
T ss_dssp EEEECCCC------HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEE
T ss_pred EEEEecCC------HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEE
Confidence 44443322 23344444444332111111111100000 0000 0 000000 0
Q ss_pred -hHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCC
Q 002955 724 -QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 802 (863)
Q Consensus 724 -~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 802 (863)
...+....+...+.+ ...+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag~---- 231 (268)
T 3r4c_A 160 YFDEEAEQKVMPLLSG-LSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAGI---- 231 (268)
T ss_dssp ECCHHHHHHHGGGCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred ecChHHHHHHHHhCCC-cEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCCC----
Confidence 000111112222211 2355678899999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHH
Q 002955 803 PSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGL 840 (863)
Q Consensus 803 ~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L 840 (863)
+|+||+. +..|+|++. +.++|.++|+++
T Consensus 232 ----------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 232 ----------GVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp ----------EEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred ----------eEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 5667764 477999885 568899999886
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=223.77 Aligned_cols=220 Identities=17% Similarity=0.212 Sum_probs=139.2
Q ss_pred HHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc----c-CCceEEcc
Q 002955 584 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS----C-EGLGIAAE 658 (863)
Q Consensus 584 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~----l-~~l~liae 658 (863)
+.+|+.+++|+|++||||||++ .++.++++++++|++| +++ +.|+|||||+...+.+.++. + ...++|++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHH-HhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567788899999999999999 6788999999999998 777 99999999999998888753 1 12468999
Q ss_pred CcEEEEeCCceeEEeecCC-CCccHHHHHHHHHHHHhh--------cCCCceeeeccceeEee-c-ccCCCC----cc--
Q 002955 659 HGYFVRPNYGVDWETCVSV-PDFSWKQIAEPVMKLYTE--------TTDGSTIETKESALVWN-F-QYADPD----FG-- 721 (863)
Q Consensus 659 nGa~I~~~~~~~w~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~-y-~~~d~~----~~-- 721 (863)
||+.|+.++...+...+.. .+ .+.+.++++...+ ..++.+++.+.....+. + +..+.. +.
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 156 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEE
Confidence 9999988654333322100 01 2333333332211 12334443322211111 1 111100 00
Q ss_pred ---hhhHHHHHHHHHHHhcCCCeEEE-ECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHH
Q 002955 722 ---SCQAKELLDHLESVLANEPVSVK-SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMF 793 (863)
Q Consensus 722 ---~~~a~el~~~L~~~l~~~~~~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf 793 (863)
.....++.+.+.+.+.+..+.+. ++..++||.|+++|||.|+++| + |+++++++|||| +.||++||
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml 230 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIF 230 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHH
Confidence 01122334445544443234444 4678999999999999999999 6 999999999999 99999999
Q ss_pred HHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCH
Q 002955 794 EVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDT 830 (863)
Q Consensus 794 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~ 830 (863)
+.++. .+++||+. +..|+|++.+.
T Consensus 231 ~~~~~-------------~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 231 ADPRT-------------VGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp HSTTS-------------EEEECSSHHHHHHHHHHHHCTTC
T ss_pred hcCcc-------------CcEEecCCCHHHHHhhheeCCCC
Confidence 99874 35667764 46677766543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=221.21 Aligned_cols=218 Identities=16% Similarity=0.112 Sum_probs=151.0
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc-c--CCceEEccCcEEEEeC
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C--EGLGIAAEHGYFVRPN 666 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-l--~~l~liaenGa~I~~~ 666 (863)
|++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.++. + ...+++++||+.|...
T Consensus 2 M~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~ 77 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTP---PRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRN 77 (246)
T ss_dssp CCSEEEEECSBTTTBS---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEET
T ss_pred CCceEEEEeCcCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEEC
Confidence 6789999999999999 7889999999999998 778999999999999998888752 1 1247899999999998
Q ss_pred CceeEEeecC-CCCccHHHHHHHHHHHHh-----hcCCCceeeeccceeEee--cccCCC----Ccchh-----hHHHHH
Q 002955 667 YGVDWETCVS-VPDFSWKQIAEPVMKLYT-----ETTDGSTIETKESALVWN--FQYADP----DFGSC-----QAKELL 729 (863)
Q Consensus 667 ~~~~w~~~~~-~~~~~w~~~v~~i~~~y~-----~~~~gs~ie~k~~~l~~~--y~~~d~----~~~~~-----~a~el~ 729 (863)
+...|...++ ..+.+....+...++.+. ....+.|++.+...+.+. .+.... .+... ...++.
T Consensus 78 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (246)
T 3f9r_A 78 GLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLI 157 (246)
T ss_dssp TEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHH
Confidence 7666765432 011222222222222221 123466776655444331 111100 00000 123445
Q ss_pred HHHHHHhcCCCe-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC----cchHHHHHHhhhhcCCCC
Q 002955 730 DHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD----RSDEDMFEVIKSAAAGPS 804 (863)
Q Consensus 730 ~~L~~~l~~~~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~----~ND~~Mf~~ag~~~~~~~ 804 (863)
+.+.+.+.+..+ .+.+++.++||+|+|+|||.|+++|++ ++++++||||+ .||++||+.++.
T Consensus 158 ~~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------ 224 (246)
T 3f9r_A 158 AELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------ 224 (246)
T ss_dssp HHHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS------
T ss_pred HHHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc------
Confidence 556666655433 578899999999999999999999986 68999999995 999999997764
Q ss_pred CCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHHH
Q 002955 805 LSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 805 ~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
.+++| .+..++++.|+.|+.
T Consensus 225 -------~g~~v-----------~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 225 -------IGHKV-----------TSYKDTIAEVEKIIA 244 (246)
T ss_dssp -------EEEEC-----------SSHHHHHHHHHHHHH
T ss_pred -------cEEEe-----------CCHHHHHHHHHHHhc
Confidence 24444 457888888887763
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=216.87 Aligned_cols=222 Identities=17% Similarity=0.153 Sum_probs=154.0
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-Cc-eEEccCcEEEEe-CCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GL-GIAAEHGYFVRP-NYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l-~liaenGa~I~~-~~~ 668 (863)
+|+|++||||||++ .++.++++++++|++ ++.|+.|++||||+...+..++..+. .. ++|++||+.+.. .+.
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~ 76 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCC
Confidence 68999999999999 678899999999999 67899999999999999999887663 22 689999999988 444
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeecc---------ceeEee-cccC------CCC-----
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKE---------SALVWN-FQYA------DPD----- 719 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~---------~~l~~~-y~~~------d~~----- 719 (863)
..+...+ + .+.++++++.+.+. ..+.+...+. ..+... +... .+-
T Consensus 77 ~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~ 150 (268)
T 1nf2_A 77 VILNEKI---P---PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLL 150 (268)
T ss_dssp EEEECCB---C---HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEE
T ss_pred EEEecCC---C---HHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEE
Confidence 3343322 2 23334444444331 1122221110 000000 0000 000
Q ss_pred c-chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 720 F-GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 720 ~-~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+ ......++.+.+.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.||++|++.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag~ 227 (268)
T 1nf2_A 151 IDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAGL 227 (268)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCSE
T ss_pred ECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcCC
Confidence 0 01123344455555454333445578889999999999999999999999 9999999999999999999999986
Q ss_pred hcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHH
Q 002955 799 AAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLA 841 (863)
Q Consensus 799 ~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~ 841 (863)
+++||+. +..|+|++.+ .++|.++|+++.
T Consensus 228 --------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 228 --------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp --------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred --------------EEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 5667764 3568998864 678999998875
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=238.55 Aligned_cols=293 Identities=15% Similarity=0.140 Sum_probs=198.3
Q ss_pred CCEEEEeCcccchHHHHHHhhC------CCCeEEEEEeCCC-----CChhHhh-cCCC--------------------hH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYR-TLPI--------------------RD 247 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r-~lp~--------------------r~ 247 (863)
+|++++||||-.++|.+++... .++++.|++|-.- |....-. .+|. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4788999999999999998764 3689999999642 1111000 0111 01
Q ss_pred HHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC--------c
Q 002955 248 ELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL--------P 319 (863)
Q Consensus 248 eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~--------~ 319 (863)
-+..++..||.|---++.|++..++... .|.. ++...+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 3456788899998888888887654210 0111 1122344568899999999988643110 0
Q ss_pred ----hHHHHHHHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHH
Q 002955 320 ----ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEV 390 (863)
Q Consensus 320 ----~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~ 390 (863)
........+++++ ++.++|++|||+++.||+..+++|+.+++++++ + |+.+|.. +. +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~G---~~----~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGTG---KK----KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECCB---CH----HH
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEecc---Cc----hH
Confidence 0112234455554 457899999999999999999999999976543 2 5656632 22 22
Q ss_pred HHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCC
Q 002955 391 QSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 470 (863)
Q Consensus 391 ~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~ 470 (863)
...+..+..+.+.+ + .+.+..+.+++..+|+.||+||+||.+||||++++|||+|
T Consensus 370 ~~~~~~~~~~~~~~--------v-~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~---------------- 424 (536)
T 3vue_A 370 EKLLKSMEEKYPGK--------V-RAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY---------------- 424 (536)
T ss_dssp HHHHHHHHHHSTTT--------E-EEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----------------
T ss_pred HHHHHHHHhhcCCc--------e-EEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc----------------
Confidence 33333343333221 2 3455678999999999999999999999999999999999
Q ss_pred CCCCccEEecccccCcccCCC---c----------eEeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhhhhccCCHH
Q 002955 471 TAKSSMLVVSEFVGCSPSLSG---A----------IRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 471 ~~~~g~lVlSe~~G~~~~l~~---a----------l~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~ 535 (863)
+.|+|+|+.+|+.+.+.+ | ++|+|.|++++|+||.++|.. .+..++.+.+.+ .+.++|.
T Consensus 425 ---G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am---~~~fSW~ 498 (536)
T 3vue_A 425 ---GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCM---NQDLSWK 498 (536)
T ss_dssp ---TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH---HSCCSSH
T ss_pred ---CCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHH---HhcCCHH
Confidence 678999999999988832 3 488999999999999999863 222222221112 2457888
Q ss_pred HHHHHHHHHHHH
Q 002955 536 YWARSFLQDLER 547 (863)
Q Consensus 536 ~W~~~~l~~l~~ 547 (863)
.-|+++.+-+.+
T Consensus 499 ~~A~~y~~ly~~ 510 (536)
T 3vue_A 499 GPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 888887765543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=222.35 Aligned_cols=228 Identities=16% Similarity=0.123 Sum_probs=130.7
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-C-ceEEccCcEEEEeC
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G-LGIAAEHGYFVRPN 666 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~-l~liaenGa~I~~~ 666 (863)
.|++|+|++||||||++ .++.++++++++|++| +++|+.|+|||||+...+..++..+. . .++|++||+.|...
T Consensus 6 ~m~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 81 (275)
T 1xvi_A 6 IQQPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLA 81 (275)
T ss_dssp CCCCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECC
T ss_pred ccCceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEec
Confidence 36789999999999998 4566778899999998 77899999999999999999988763 2 26999999999733
Q ss_pred C--c-----eeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccce---e----Eeec-----ccC-CCC--cchhh
Q 002955 667 Y--G-----VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESA---L----VWNF-----QYA-DPD--FGSCQ 724 (863)
Q Consensus 667 ~--~-----~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~---l----~~~y-----~~~-d~~--~~~~~ 724 (863)
+ . ..+...++ .+.+..+++.+.+.....+....... . ...+ ... +.. .....
T Consensus 82 ~~~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
T 1xvi_A 82 EQWQEIDGFPRIISGIS------HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRD 155 (275)
T ss_dssp TTCTTSTTTTEEECSSC------HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECS
T ss_pred CcccccCceEEEecCCC------HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecC
Confidence 2 1 12443322 12333333332221011110000000 0 0000 000 000 00000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcC-CCcce--EEEEeCCcchHHHHHHhhhhcC
Q 002955 725 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKG-MLPDF--VLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 725 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~g-i~~d~--vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
..+.++.+.+.+....+.+..+..++||.|++++||.|++++++++ | +++++ +++|||+.||++||+.+|.+
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-- 230 (275)
T 1xvi_A 156 SDERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLLEVMDYA-- 230 (275)
T ss_dssp CHHHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHHHTSSEE--
T ss_pred CHHHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHHHhCCce--
Confidence 1122233333333234566667789999999999999999999999 8 88999 99999999999999999875
Q ss_pred CCCCCCCcceEEEEeCCC-------cc--ccc-eecC--CHhHHHHHHHHHHHh
Q 002955 802 GPSLSPVAEVFACTVGQK-------PS--KAK-YYLD--DTAEILRMLLGLAEA 843 (863)
Q Consensus 802 ~~~~~~~~~~~av~vG~~-------~s--~A~-y~l~--d~~eV~~~L~~L~~~ 843 (863)
|+||+. +. .|+ |++. +.++|+++|+++...
T Consensus 231 ------------va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~~ 272 (275)
T 1xvi_A 231 ------------VIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSA 272 (275)
T ss_dssp ------------EECCCCC-----------------------------------
T ss_pred ------------EEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHHh
Confidence 444432 11 367 7764 567899999988653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=219.23 Aligned_cols=211 Identities=16% Similarity=0.196 Sum_probs=136.7
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh-cc--CCceEEccCcEEEEe
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS-SC--EGLGIAAEHGYFVRP 665 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~-~l--~~l~liaenGa~I~~ 665 (863)
.|++|+|++||||||++ .++.++++++++|++| +++ +.|+|||||+...+.+.++ .+ ...++|++||+.|..
T Consensus 3 ~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~ 77 (246)
T 2amy_A 3 APGPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYK 77 (246)
T ss_dssp -CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEE
T ss_pred CCCceEEEEECCCCcCC---CCcccCHHHHHHHHHH-HhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEe
Confidence 46789999999999999 6788999999999998 777 9999999999988877775 11 123689999999988
Q ss_pred CCceeEEeecCC-CCccHHHHHHHHHHHHh--------hcCCCceeeeccceeEee-c-ccCCC----Ccc-----hhhH
Q 002955 666 NYGVDWETCVSV-PDFSWKQIAEPVMKLYT--------ETTDGSTIETKESALVWN-F-QYADP----DFG-----SCQA 725 (863)
Q Consensus 666 ~~~~~w~~~~~~-~~~~w~~~v~~i~~~y~--------~~~~gs~ie~k~~~l~~~-y-~~~d~----~~~-----~~~a 725 (863)
.+...|...++. .+ .+.+..+++... ...++.+.+.+.....+. + +.... .+. ....
T Consensus 78 ~~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (246)
T 2amy_A 78 DGKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIR 154 (246)
T ss_dssp TTEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHH
T ss_pred CCcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHH
Confidence 665555543200 01 122333322221 112344444332222111 1 11100 000 0012
Q ss_pred HHHHHHHHHHhcCCCeEE-EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhc
Q 002955 726 KELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAA 800 (863)
Q Consensus 726 ~el~~~L~~~l~~~~~~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~ 800 (863)
.++.+.+.+.+.+..+.+ .++..++||+|+++|||.|+++| + |+++++++|||| +.||++||+.+|.
T Consensus 155 ~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~-- 226 (246)
T 2amy_A 155 QKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT-- 226 (246)
T ss_dssp HHHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE--
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc--
Confidence 233444555454323444 45789999999999999999999 6 999999999999 9999999999875
Q ss_pred CCCCCCCCcceEEEEeCCC----cccccee
Q 002955 801 AGPSLSPVAEVFACTVGQK----PSKAKYY 826 (863)
Q Consensus 801 ~~~~~~~~~~~~av~vG~~----~s~A~y~ 826 (863)
.+++||+. +..|+|+
T Consensus 227 -----------ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 227 -----------MGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp -----------EEEECSSHHHHHHHHHHHC
T ss_pred -----------ceEEeeCCCHHHHHHHhhc
Confidence 36778874 3555553
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-23 Score=212.78 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=148.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-C
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~ 667 (863)
|++|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+..++..+. ..+++++||+.+... +
T Consensus 3 mm~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 78 (227)
T 1l6r_A 3 HMIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDG 78 (227)
T ss_dssp CCCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTS
T ss_pred cceEEEEEECCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCC
Confidence 5689999999999999 6788999999999998 78899999999999999999887663 235899999999863 3
Q ss_pred cee-EEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCC--CcchhhHHHHHHHHHHHhcCCCeEEE
Q 002955 668 GVD-WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP--DFGSCQAKELLDHLESVLANEPVSVK 744 (863)
Q Consensus 668 ~~~-w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~--~~~~~~a~el~~~L~~~l~~~~~~v~ 744 (863)
... |... . +.+..+ +...+ .+ ..+.. ...+++..+. ...... .+.++.+.+.+ .+.+.
T Consensus 79 ~~i~~~~~-------l-~~~~~i-~~~~~----~~-~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~ 139 (227)
T 1l6r_A 79 SIKKFFSN-------E-GTNKFL-EEMSK----RT-SMRSI-LTNRWREASTGFDIDPED-VDYVRKEAESR---GFVIF 139 (227)
T ss_dssp CEEESSCS-------H-HHHHHH-HHHTT----TS-SCBCC-GGGGGCSSSEEEBCCGGG-HHHHHHHHHTT---TEEEE
T ss_pred CEEEEecc-------H-HHHHHH-HHHHH----Hh-cCCcc-ccccceecccceEEecCC-HHHHHHHHHhc---CEEEE
Confidence 322 2211 2 444445 43322 11 11000 0000000000 000011 12223333333 34455
Q ss_pred ECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----c
Q 002955 745 SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----P 820 (863)
Q Consensus 745 ~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~ 820 (863)
++..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.++. +++||+. +
T Consensus 140 ~~~~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag~--------------~va~~n~~~~~k 202 (227)
T 1l6r_A 140 YSGYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIK 202 (227)
T ss_dssp EETTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHH
T ss_pred ecCcEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcCc--------------eEEecCchHHHH
Confidence 88999999999999999999999999 9999999999999999999999986 4566653 3
Q ss_pred cccceecCC--HhHHHHHHHHHH
Q 002955 821 SKAKYYLDD--TAEILRMLLGLA 841 (863)
Q Consensus 821 s~A~y~l~d--~~eV~~~L~~L~ 841 (863)
..|+|++.+ .++|.++|+++.
T Consensus 203 ~~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 203 AVSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HHCSEECSCCTTHHHHHHHHHTT
T ss_pred HhCCEEecCCCCcHHHHHHHHHh
Confidence 578898854 588999998763
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=208.42 Aligned_cols=214 Identities=18% Similarity=0.141 Sum_probs=151.6
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCce
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~ 669 (863)
++|+|+||+||||++ ..+.+++.+.++|+++ ++.|+.|+++|||+...+.+++..+. ...++++||+.+...+..
T Consensus 2 m~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (231)
T 1wr8_A 2 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 77 (231)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred ceeEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEE
Confidence 579999999999999 6788999999999998 78899999999999999988887652 345889999998775443
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeec-cc---eeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEE
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETK-ES---ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 745 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k-~~---~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 745 (863)
.|...+ +.+.++++.+.+..+|..++.. .. .+.+. .+......+ +.+.+.+.. .+.+.+
T Consensus 78 ~~~~~l--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~-~~~~~~ 140 (231)
T 1wr8_A 78 IFLASM--------DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETINVETV----REIINELNL-NLVAVD 140 (231)
T ss_dssp EESCCC--------SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSCHHHH----HHHHHHTTC-SCEEEE
T ss_pred EEeccH--------HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCCHHHH----HHHHHhcCC-cEEEEe
Confidence 333222 2334444444323334332110 00 01111 111111122 222223433 344448
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cc
Q 002955 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PS 821 (863)
Q Consensus 746 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s 821 (863)
+..++||.|++.+|+.+++++++++ |++++++++|||+.||++|++.+|. +++||+. +.
T Consensus 141 ~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~ 203 (231)
T 1wr8_A 141 SGFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKE 203 (231)
T ss_dssp CSSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHT
T ss_pred cCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEecCCCHHHHh
Confidence 8899999999999999999999999 9999999999999999999999986 3556653 35
Q ss_pred ccceecCC--HhHHHHHHHHHHH
Q 002955 822 KAKYYLDD--TAEILRMLLGLAE 842 (863)
Q Consensus 822 ~A~y~l~d--~~eV~~~L~~L~~ 842 (863)
.|+|++++ .++|.++|+++..
T Consensus 204 ~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 204 NADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp TCSEECSSCHHHHHHHHHHHHHH
T ss_pred hCCEEecCCCcchHHHHHHHHHH
Confidence 78999865 4679999998764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=212.19 Aligned_cols=223 Identities=16% Similarity=0.164 Sum_probs=150.0
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEe-CCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRP-NYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~-~~~ 668 (863)
++|+|+||+||||++ .++.+++.++++|+++ ++.|+.|+++|||+...+..++..+. ...+++.||+.+.. .+.
T Consensus 3 mikli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR 78 (288)
T ss_dssp -CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred ceEEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCc
Confidence 379999999999999 6788999999999998 78899999999999999999987763 34589999999987 344
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeecc------c---------------------------
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKE------S--------------------------- 707 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~------~--------------------------- 707 (863)
..+...++ .+.+.++++...+. ..+.+..... .
T Consensus 79 ~~~~~~~~------~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (288)
T 1nrw_A 79 LYHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQS 152 (288)
T ss_dssp EEEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC
T ss_pred EEEEeeCC------HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcC
Confidence 34443322 23344444433221 1111211100 0
Q ss_pred eeEe--ecccCC---C--Ccc----hhhHHHHHHHHHHHhcCC-Ce-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcC
Q 002955 708 ALVW--NFQYAD---P--DFG----SCQAKELLDHLESVLANE-PV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKG 774 (863)
Q Consensus 708 ~l~~--~y~~~d---~--~~~----~~~a~el~~~L~~~l~~~-~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~g 774 (863)
.+.. .+.+.. + ... .....+.++.+.+.+... .+ .+.++..++||.|++++||.+++++++++ |
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~---~ 229 (288)
T 1nrw_A 153 GFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---N 229 (288)
T ss_dssp CEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---T
T ss_pred CceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh---C
Confidence 0000 001110 0 000 000012223333333221 23 44567889999999999999999999999 9
Q ss_pred CCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHH
Q 002955 775 MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 840 (863)
Q Consensus 775 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L 840 (863)
++++++++|||+.||++||+.+|. +|+||+. +..|+|++.+ .++|.++|+++
T Consensus 230 ~~~~~~~~~GD~~nD~~m~~~ag~--------------~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 230 IPLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp CCGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCc--------------EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 999999999999999999999986 4556653 3568898864 57899999875
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=222.94 Aligned_cols=288 Identities=16% Similarity=0.188 Sum_probs=208.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-HHHHhCCEecccCHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-~~ll~~dligF~t~~~~~~F 270 (863)
+++..+| |+||+|+...+.+...+.++....++.+.+|...+ .+...+....+. ..+-.+|.|-+.+....+.+
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH
Confidence 3444566 99999987765444444444433469999995422 122222223333 33456899999988777666
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccc
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIF 347 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~ 347 (863)
.+. .+. ..++.++|+|||.+.|.. ........+++++ .++.+|+++||+++.
T Consensus 156 ~~~----~~~----------------~~~~~vi~ngv~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 210 (394)
T 3okp_A 156 KSA----FGS----------------HPTFEHLPSGVDVKRFTP-----ATPEDKSATRKKLGFTDTTPVIACNSRLVPR 210 (394)
T ss_dssp HHH----HCS----------------SSEEEECCCCBCTTTSCC-----CCHHHHHHHHHHTTCCTTCCEEEEESCSCGG
T ss_pred HHh----cCC----------------CCCeEEecCCcCHHHcCC-----CCchhhHHHHHhcCCCcCceEEEEEeccccc
Confidence 542 111 125678999999987752 1223345666766 355899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
||+..+++|++++.+++|+++ |+.+|. ++..+.+++ ++..+ .+-+.+.|.++.+++..
T Consensus 211 Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~----~~~~~---------~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 211 KGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTLRR----LATDV---------SQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp GCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHHHH----HTGGG---------GGGEEEEESCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHHHH----HHhcc---------cCeEEEcCCCCHHHHHH
Confidence 999999999999999999877 888873 333333333 32222 22345677899999999
Q ss_pred HHHhccceeecccc-------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCC
Q 002955 428 YYVIAECCLVTAVR-------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPW 498 (863)
Q Consensus 428 ly~~ADv~vvtS~~-------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~ 498 (863)
+|+.||++|+||.. ||||++++|||+| +.|+|+|+.+|..+.+. .|++++|.
T Consensus 269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~~g~~~~~~ 329 (394)
T 3okp_A 269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC-------------------GVPVIAGTSGGAPETVTPATGLVVEGS 329 (394)
T ss_dssp HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT-------------------TCCEEECSSTTGGGGCCTTTEEECCTT
T ss_pred HHHhCCEEEecCccccccccccccCcHHHHHHHc-------------------CCCEEEeCCCChHHHHhcCCceEeCCC
Confidence 99999999999999 9999999999999 56799999998888884 58999999
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHh
Q 002955 499 NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 499 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 551 (863)
|++++|++|.++++. ++.++...++.++++.+ +++..+++++++.+++....
T Consensus 330 d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 330 DVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp CHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 999999999999984 45555556667777765 89999999999888765433
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=227.46 Aligned_cols=293 Identities=15% Similarity=0.185 Sum_probs=207.8
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhc-C----C-ChHHH-HHHHHhCCEecccCHHHHHHHHHH
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L----P-IRDEL-LRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~-l----p-~r~ei-l~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
|+|++|++...+++.++.+.. ++|+.+.+|..++....+.. . + .+..+ ...+-.+|.|.+.+....+.+.+.
T Consensus 124 Div~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 202 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRDLW-RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH 202 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHH
T ss_pred CEEEeCCccHHHHHHHHHHHc-CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHH
Confidence 999999887666665565543 68999999987542110000 0 0 01111 123446899999888776666542
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 350 (863)
+|+. ..++.++|+|||...|... .......+++++ .++++|+++||+.+.||+
T Consensus 203 ----~g~~---------------~~k~~vi~ngvd~~~~~~~-----~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~ 258 (438)
T 3c48_A 203 ----YDAD---------------PDRISVVSPGADVELYSPG-----NDRATERSRRELGIPLHTKVVAFVGRLQPFKGP 258 (438)
T ss_dssp ----HCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCH
T ss_pred ----hCCC---------------hhheEEecCCccccccCCc-----ccchhhhhHHhcCCCCCCcEEEEEeeecccCCH
Confidence 2321 1235678999998877532 111222355665 468899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++.+++|+. ++.|+++|.+.. .++. .+++.+++++.+ ..+-+.+.|.++.+++..+|+
T Consensus 259 ~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 259 QVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELG-------VEKRIRFLDPRPPSELVAVYR 324 (438)
T ss_dssp HHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTT-------CTTTEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcC-------CCCcEEEcCCCChHHHHHHHH
Confidence 99999999999998842 355888885321 1222 334444444432 222345678999999999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
.||++|+||..||||++++|||+| +.|+|+|...|..+.+. .|++++|.|++++|++|
T Consensus 325 ~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 385 (438)
T 3c48_A 325 AADIVAVPSFNESFGLVAMEAQAS-------------------GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADAL 385 (438)
T ss_dssp HCSEEEECCSCCSSCHHHHHHHHT-------------------TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHH
T ss_pred hCCEEEECccccCCchHHHHHHHc-------------------CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHH
Confidence 999999999999999999999999 56799999988888883 38999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHhh
Q 002955 508 DSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 552 (863)
.++++. ++.+....++.++++.++++..+++++++.++++....
T Consensus 386 ~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 386 ATLLDD-DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 999984 44555556667777777999999999999888877653
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=235.58 Aligned_cols=306 Identities=14% Similarity=0.049 Sum_probs=211.3
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhH------------hhcCC--ChHHH-HHHHHhCCEec
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI------------YRTLP--IRDEL-LRALLNADLIG 260 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~------------~r~lp--~r~ei-l~~ll~~dlig 260 (863)
.+| |+|++|.++..+++.++.+.. ++|+.+.+|..++.... .+..- .+..+ ...+-.+|.|-
T Consensus 119 ~~~--Divh~~~~~~~~~~~~~~~~~-~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 195 (499)
T 2r60_A 119 KFP--QVVTTHYGDGGLAGVLLKNIK-GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKII 195 (499)
T ss_dssp CCC--SEEEEEHHHHHHHHHHHHHHH-CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEE
T ss_pred CCC--CEEEEcCCcchHHHHHHHHhc-CCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEE
Confidence 355 999999988766666665544 68899999987542210 00000 01011 22345688888
Q ss_pred ccCHHHHHHHHHHHHhhhC-ceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-------
Q 002955 261 FHTFDYARHFLSCCSRMLG-VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF------- 332 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg-~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~------- 332 (863)
+.+...++.+.+. ..+| +.. .....++.++|+|||.+.|.... .......+++++
T Consensus 196 ~~S~~~~~~~~~~--~~~g~~~~-----------~~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~ 258 (499)
T 2r60_A 196 VSTSQERFGQYSH--DLYRGAVN-----------VEDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSE 258 (499)
T ss_dssp ESSHHHHHHTTTS--GGGTTTCC-----------TTCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGG
T ss_pred ECCHHHHHHHHhh--hccccccc-----------ccCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhccccccc
Confidence 8777655544320 0012 100 00122467899999998875321 112223444443
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCc-------hhHHHHHHHHHHHHHHHhhc
Q 002955 333 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG-------RDVQEVQSETHATVRRINKI 404 (863)
Q Consensus 333 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-------~~~~~~~~~v~~l~~~IN~~ 404 (863)
.++++|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +.. ....++.+++.+++++.+
T Consensus 259 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~-- 332 (499)
T 2r60_A 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNND-- 332 (499)
T ss_dssp GTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTT--
T ss_pred CCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcC--
Confidence 36789999999999999999999999998876653 3467666411 110 112334666666666653
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhc----cceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec
Q 002955 405 FGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480 (863)
Q Consensus 405 ~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS 480 (863)
..+.+.+.|.++.+++..+|+.| |++|+||..||||++++|||+| |.|+|+|
T Consensus 333 -----l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~-------------------G~PvI~s 388 (499)
T 2r60_A 333 -----CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS-------------------GLPAVVT 388 (499)
T ss_dssp -----CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT-------------------TCCEEEE
T ss_pred -----CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc-------------------CCCEEEe
Confidence 22334567899999999999999 9999999999999999999999 5679999
Q ss_pred ccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHhh
Q 002955 481 EFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 481 e~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 552 (863)
+.+|..+.+. .|++|+|.|++++|++|.++++. ++.++...++.++++.+ +++..+++++++.++++....
T Consensus 389 ~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 389 RNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp SSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 9888888883 38999999999999999999984 45555556667777776 999999999999998877654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=212.89 Aligned_cols=219 Identities=13% Similarity=0.203 Sum_probs=146.6
Q ss_pred ceeEecCCccccCCCCCCCC-CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC----CceEEccCcEEEEeCC
Q 002955 593 RAILLDYDGTIMVPGSISTS-PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE----GLGIAAEHGYFVRPNY 667 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~-~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~----~l~liaenGa~I~~~~ 667 (863)
|+|+||+||||++ .++. +++.++++|+++ ++.|+.|+++|||+ ..+.+++..++ ..+++++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAA-HAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHH-HHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 8999999999999 6677 999999999998 77899999999999 88776665443 3368999999998755
Q ss_pred ceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccceeE-eecccC---------------CCCcc--
Q 002955 668 GVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESALV-WNFQYA---------------DPDFG-- 721 (863)
Q Consensus 668 ~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~y~~~---------------d~~~~-- 721 (863)
...+...++ . +.+.++++...+. ..+.+.+.....+. .++... ++.+.
T Consensus 78 ~~i~~~~l~---~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKSAIP---Q---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEECCCC---H---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEecCCC---H---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 545544322 1 2333333332221 11222211100000 111100 00000
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcC
Q 002955 722 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 722 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
.....+....+.+.+.+ ...+.++..++||.|.+++|+.+++++++++ |++++++++|||+.||++|++.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--- 224 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI--- 224 (261)
T ss_dssp ECCCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE---
T ss_pred EEeCHHHHHHHHHhcCC-eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCc---
Confidence 00001111223333332 2344567789999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCcceEEEEeCCC----ccccceecCCHhH--HHHHHHHH
Q 002955 802 GPSLSPVAEVFACTVGQK----PSKAKYYLDDTAE--ILRMLLGL 840 (863)
Q Consensus 802 ~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~e--V~~~L~~L 840 (863)
+|++|+. +..|+|++++.++ |.++|+++
T Consensus 225 -----------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 225 -----------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp -----------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -----------eEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 4566654 3679999987665 99999876
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=225.23 Aligned_cols=299 Identities=17% Similarity=0.102 Sum_probs=204.3
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCCh----hHhhcC--C-------------ChHHHHHHHHhCCEecc
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS----EIYRTL--P-------------IRDELLRALLNADLIGF 261 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~~r~l--p-------------~r~eil~~ll~~dligF 261 (863)
|+|++|+++..+++.+++.+..++|+.+.+|..++.. ..+..+ + ...-....+..+|.|-.
T Consensus 131 Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 131 DVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp SEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEE
T ss_pred CEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEe
Confidence 9999999998888888873456799999999876421 111110 1 01122334556898888
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeE--EEEEEeccccCchHHHhhcCC-----------chHHHHHHHH
Q 002955 262 HTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT--VSIKILPVGIHIGQLQSVLNL-----------PETEAKVAEL 328 (863)
Q Consensus 262 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~--~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~~l 328 (863)
.+....+.+.+. ..|..... . + ..+. .++.++|+|||.+.|...... +........+
T Consensus 211 ~S~~~~~~~~~~---~~~~~~~~---~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 211 VSPTYAREITEP---QFAYGMEG---L--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp SSHHHHHHTTSH---HHHTTCHH---H--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred cCHHHHHHHhcc---ccCcchHH---H--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHH
Confidence 887766554321 01100000 0 0 0001 246679999999887543110 0111233456
Q ss_pred HHHhC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhh
Q 002955 329 QDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINK 403 (863)
Q Consensus 329 ~~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~ 403 (863)
++++. ++++|+++||+++.||+..+++|+.++.+ +++ .|+++|.. + .++.+++++++.+.+
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~g-----~--~~~~~~l~~~~~~~~- 346 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGG----QLALLGAG-----D--PVLQEGFLAAAAEYP- 346 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTC----EEEEEEEE-----C--HHHHHHHHHHHHHST-
T ss_pred HHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCc----EEEEEeCC-----c--hHHHHHHHHHHHhCC-
Confidence 66662 67899999999999999999999999876 344 48888842 2 134556666665542
Q ss_pred ccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc
Q 002955 404 IFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV 483 (863)
Q Consensus 404 ~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~ 483 (863)
..|+++.|. +.+++..+|+.||++|+||..||||++++|||+| +.|+|+|..+
T Consensus 347 -------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~-------------------G~PvI~s~~g 399 (485)
T 2qzs_A 347 -------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY-------------------GTLPLVRRTG 399 (485)
T ss_dssp -------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TCEEEEESSH
T ss_pred -------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC-------------------CCCEEECCCC
Confidence 236667776 8888999999999999999999999999999999 6789999999
Q ss_pred cCcccCC------------CceEeCCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 002955 484 GCSPSLS------------GAIRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 549 (863)
Q Consensus 484 G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 549 (863)
|..+.+. .|++++|.|++++|++|.+++. ..++.++...++.++ ..+++...++++++-+++..
T Consensus 400 g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 400 GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC
T ss_pred CccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhh
Confidence 9888873 4799999999999999999993 233444333333332 67999999999988887765
Q ss_pred Hhh
Q 002955 550 RDH 552 (863)
Q Consensus 550 ~~~ 552 (863)
.++
T Consensus 478 ~~~ 480 (485)
T 2qzs_A 478 LEH 480 (485)
T ss_dssp ---
T ss_pred hhh
Confidence 443
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=221.02 Aligned_cols=283 Identities=13% Similarity=0.172 Sum_probs=202.1
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhh-CC-CCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCC--EecccCHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKR-FN-RVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNAD--LIGFHTFDYARH 269 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~d--ligF~t~~~~~~ 269 (863)
...+| |+|++|.+...+.+...+.. .| ..++...+|...+... ..+...+-.+| .|-+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHH
Confidence 34466 99999944433333222222 22 3566677775544321 11222233467 887777766655
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---C--CCeEEEeecCc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---K--GQIVMLGVDDM 344 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~vil~Vdrl 344 (863)
+.. +|. ..++.++|+|||.+.|. ..++++ . ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCC
Confidence 543 232 12567899999997761 122333 2 68899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc----ccEEEEcCCC
Q 002955 345 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY----QPVVLIDTPL 420 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~----~pv~~~~~~v 420 (863)
.+.||+..+++|+.++.+++|+++ |+.+|...... ..++++.+.+++++.+- .+. ..|+++.|.+
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l----~~~v~~l~~vv~~~g~~ 262 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGV----DNVFTHLNKIMINRTVL 262 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTC----SCHHHHHTTEEEECSCC
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCc----ccccccccceeeccCcC
Confidence 999999999999999999999987 88888543221 12245556666555431 111 1267889999
Q ss_pred CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCC---------
Q 002955 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG--------- 491 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~--------- 491 (863)
+.+++..+|+.||++|+||..||||++++|||+| +.|+|+|..+|..+.+.+
T Consensus 263 ~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-------------------G~PvI~s~~~g~~e~v~~~~~~~i~~~ 323 (413)
T 3oy2_A 263 TDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVL-------------------GKPLIISAVGGADDYFSGDCVYKIKPS 323 (413)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTT-------------------TCCEEEECCHHHHHHSCTTTSEEECCC
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHc-------------------CCCEEEcCCCChHHHHccCcccccccc
Confidence 9999999999999999999999999999999999 567999999998888843
Q ss_pred ---------ce--EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHhh
Q 002955 492 ---------AI--RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 492 ---------al--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~~ 552 (863)
|+ +++|.|++++|++| ++++. ++.++...++.++++ ..+++..+++++++-++++.+..
T Consensus 324 ~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 324 AWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp EEEECTTTCSSCCEEEECCHHHHHHHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccccccCcceeeCCCCHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 99974 455566666777777 56899999999999998876543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=212.94 Aligned_cols=217 Identities=19% Similarity=0.254 Sum_probs=139.9
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--C-CceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--E-GLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~-~l~liaenGa~I~~~~~ 668 (863)
.++|++||||||++ .+..+ +++.++|+++ + .|+.|+|||||+...+.+++..+ . ..++|++||+.|+....
T Consensus 3 ~~li~~DlDGTLl~---~~~~~-~~~~~~l~~~-~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~ 76 (244)
T 1s2o_A 3 QLLLISDLDNTWVG---DQQAL-EHLQEYLGDR-R-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEG 76 (244)
T ss_dssp SEEEEECTBTTTBS---CHHHH-HHHHHHHHTT-G-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTE
T ss_pred CeEEEEeCCCCCcC---CHHHH-HHHHHHHHHh-c-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCC
Confidence 34999999999998 34333 6788888886 5 48999999999999999998764 2 24689999999987431
Q ss_pred e--eEEeecCCCCccH-HHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcC--CCeEE
Q 002955 669 V--DWETCVSVPDFSW-KQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN--EPVSV 743 (863)
Q Consensus 669 ~--~w~~~~~~~~~~w-~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~--~~~~v 743 (863)
. .|...+. ..| .+.+..+...+.........+.+...+.+++. ++.. .+..+.+.+.+.. ..+.+
T Consensus 77 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~---~~~~----~~~~~~l~~~~~~~~~~~~~ 146 (244)
T 1s2o_A 77 LDQHWADYLS---EHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLD---PQAC----PTVIDQLTEMLKETGIPVQV 146 (244)
T ss_dssp ECHHHHHHHH---TTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEEC---TTSC----THHHHHHHHHHHTSSCCEEE
T ss_pred cChHHHHHHh---ccccHHHHHHHHHhccCccccCcccCCCeEEEEEeC---hhhH----HHHHHHHHHHHHhcCCCeEE
Confidence 0 1111000 011 11112222211110000001112233333332 1111 1223334433332 23443
Q ss_pred -EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 744 -KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 744 -~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
.++..++||.|++++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||+.
T Consensus 147 ~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g~--------------~va~~na~~~ 209 (244)
T 1s2o_A 147 IFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVRNAQPE 209 (244)
T ss_dssp EEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECTTCCHH
T ss_pred EEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccCc--------------EEEEcCCcHH
Confidence 577899999999999999999999999 9999999999999999999998875 5677764
Q ss_pred -ccc-------cceecCC--HhHHHHHHHHHH
Q 002955 820 -PSK-------AKYYLDD--TAEILRMLLGLA 841 (863)
Q Consensus 820 -~s~-------A~y~l~d--~~eV~~~L~~L~ 841 (863)
+.. |+|++.+ .++|.+.|+++.
T Consensus 210 ~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 210 LLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp HHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred HHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 232 7788754 578999998763
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=223.99 Aligned_cols=292 Identities=15% Similarity=0.165 Sum_probs=204.0
Q ss_pred CEEEEeCcccchHHHHHHhh-CCCCeEEEEEeCCCCCh----hHhhc--CCC-------------hHHHHHHHHhCCEec
Q 002955 201 DFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPSS----EIYRT--LPI-------------RDELLRALLNADLIG 260 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~~r~--lp~-------------r~eil~~ll~~dlig 260 (863)
|+|++|+++..+++.++++. ..++|+.+.+|..++.. ..+.. +|. ..-....+-.+|.|-
T Consensus 132 DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 211 (485)
T 1rzu_A 132 DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALS 211 (485)
T ss_dssp SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEE
Confidence 99999999988888888764 35789999999876431 11111 110 112233455689988
Q ss_pred ccCHHHHHHHHHH-HH----hhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC-----------chHHHH
Q 002955 261 FHTFDYARHFLSC-CS----RMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL-----------PETEAK 324 (863)
Q Consensus 261 F~t~~~~~~Fl~~-~~----r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~ 324 (863)
..+....+.+.+. .. .+++. ...++.++|+|||.+.|...... +.....
T Consensus 212 ~~S~~~~~~~~~~~~g~~~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T 1rzu_A 212 TVSPSYAEEILTAEFGMGLEGVIGS---------------RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALN 276 (485)
T ss_dssp ESCHHHHHHTTSHHHHTTCHHHHHT---------------TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHH
T ss_pred ecCHhHHHHHhccccCcchHHHHHh---------------hcCCceEEcCCCcccccCCcccccccccccccchhhHHHh
Confidence 8887766655431 00 00100 11245679999999887543210 011122
Q ss_pred HHHHHHHh---C-CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 002955 325 VAELQDQF---K-GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRR 400 (863)
Q Consensus 325 ~~~l~~~~---~-~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~ 400 (863)
...+++++ . ++++|++|||+++.||+..+++|+.++.+ +++ .|+++|. ++ .++++++++++.+
T Consensus 277 ~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~--~~~~~~l~~~~~~ 343 (485)
T 1rzu_A 277 KKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGA-----GD--VALEGALLAAASR 343 (485)
T ss_dssp HHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEEC-----BC--HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCc----eEEEEeC-----Cc--hHHHHHHHHHHHh
Confidence 34566666 2 26799999999999999999999999876 344 4888884 22 2345566666655
Q ss_pred HhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec
Q 002955 401 INKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480 (863)
Q Consensus 401 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS 480 (863)
.+ ..|+++.|. +.+++..+|+.||++|+||.+||||++++|||+| +.|+|+|
T Consensus 344 ~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-------------------G~PvI~s 395 (485)
T 1rzu_A 344 HH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY-------------------GCIPVVA 395 (485)
T ss_dssp TT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TCEEEEE
T ss_pred CC--------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC-------------------CCCEEEe
Confidence 42 236667776 8888899999999999999999999999999999 6789999
Q ss_pred ccccCcccCC------------CceEeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 481 EFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 481 e~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
..+|..+.+. .|++++|.|++++|++|.+++++ .++.++...++.++ ..+++...++++++-.+
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 396 RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHH
T ss_pred CCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHH
Confidence 9999888883 47999999999999999999931 33444443334433 67899999998888777
Q ss_pred HHHH
Q 002955 547 RACR 550 (863)
Q Consensus 547 ~~~~ 550 (863)
++..
T Consensus 474 ~~~~ 477 (485)
T 1rzu_A 474 QLIS 477 (485)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 6543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=221.68 Aligned_cols=297 Identities=18% Similarity=0.187 Sum_probs=203.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh--HhhcCCChHHHHHHH
Q 002955 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYRTLPIRDELLRAL 253 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~r~lp~r~eil~~l 253 (863)
..|..|....+.+++.+ +..+| |+|++|+++...+..+++++ .|+.+.+|..++... .++ .+.+-+
T Consensus 106 ~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~~~~------~~~~~~ 173 (416)
T 2x6q_A 106 EMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNREFWE------FLRRFV 173 (416)
T ss_dssp HHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHHHHH------HHHHHH
Confidence 34555555444444333 34455 99999999877766655432 789999998876421 111 122223
Q ss_pred HhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-
Q 002955 254 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF- 332 (863)
Q Consensus 254 l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 332 (863)
..+|.+-+.+.++.+..+ .. .++.++|+|||...+..... .......+++++
T Consensus 174 ~~~~~~i~~~s~~~~~~~----------------------~~--~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~ 226 (416)
T 2x6q_A 174 EKYDRYIFHLPEYVQPEL----------------------DR--NKAVIMPPSIDPLSEKNVEL---KQTEILRILERFD 226 (416)
T ss_dssp TTSSEEEESSGGGSCTTS----------------------CT--TTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTT
T ss_pred HhCCEEEEechHHHHhhC----------------------Cc--cceEEeCCCCChhhhccccc---ChhhHHHHHHHhC
Confidence 345554443333222100 00 23567999999876643211 122345566666
Q ss_pred --CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 333 --KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 333 --~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
.++++|+++||+++.||+..+++|+..+.+++|+++ |+++|..... . .+..+.+++++++.+. .
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~~-~---~~~~~~l~~~~~~~~~----~-- 292 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAHD-D---PEGWIYFEKTLRKIGE----D-- 292 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCTT-C---HHHHHHHHHHHHHHTT----C--
T ss_pred CCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCccc-c---hhHHHHHHHHHHHhCC----C--
Confidence 467899999999999999999999999999999877 8888853311 1 2234445555555532 1
Q ss_pred ccEEEEc--CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCccc
Q 002955 411 QPVVLID--TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 488 (863)
Q Consensus 411 ~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~ 488 (863)
..|.++. ..++.+++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..+.
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~-------------------G~PvI~~~~~g~~e~ 353 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK-------------------GKPVIGRAVGGIKFQ 353 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT-------------------TCCEEEESCHHHHHH
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc-------------------CCCEEEccCCCChhh
Confidence 1244442 2566899999999999999999999999999999999 567999999888888
Q ss_pred CC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHH
Q 002955 489 LS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDLER 547 (863)
Q Consensus 489 l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 547 (863)
+. .|++++ |++++|++|.++++.+ +.++...++.++++. .+++..+++.+++-+++
T Consensus 354 i~~~~~g~l~~--d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 354 IVDGETGFLVR--DANEAVEVVLYLLKHP-EVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp CCBTTTEEEES--SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred eecCCCeEEEC--CHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 73 478886 9999999999999854 445555566667665 68999999988876654
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=214.18 Aligned_cols=279 Identities=12% Similarity=0.078 Sum_probs=208.8
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
++..+| |+|++|.+....+..++.+.. +.++.+.+|..+|....++.+-..-+ ..+-.+|.+-+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQAA-EGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHHE-ESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHhc-CCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHH
Confidence 344566 999999999877755555443 68999999999887644332211111 4455789999888766665554
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCc-ccccCHH
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM-DIFKGIS 351 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl-d~~KGi~ 351 (863)
. ++ .. ++ ++|+|+|...|....... .+ -+++++|+++||+ .+.||+.
T Consensus 178 ~----~~---------------~~--~~-vi~~~v~~~~~~~~~~~~-------~~---~~~~~~i~~~G~~~~~~Kg~~ 225 (406)
T 2gek_A 178 A----LG---------------SD--AV-EIPNGVDVASFADAPLLD-------GY---PREGRTVLFLGRYDEPRKGMA 225 (406)
T ss_dssp H----HS---------------SC--EE-ECCCCBCHHHHHTCCCCT-------TC---SCSSCEEEEESCTTSGGGCHH
T ss_pred h----cC---------------CC--cE-EecCCCChhhcCCCchhh-------hc---cCCCeEEEEEeeeCccccCHH
Confidence 1 11 11 46 799999998886432110 00 0256799999999 9999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+.++.+++|+++ |+.+|. ++. +++++.+. +. .+.+.+.|.++.+++..+|+.
T Consensus 226 ~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~~~~~----~~---------~~~v~~~g~~~~~~~~~~~~~ 282 (406)
T 2gek_A 226 VLLAALPKLVARFPDVE----ILIVGR-----GDE-DELREQAG----DL---------AGHLRFLGQVDDATKASAMRS 282 (406)
T ss_dssp HHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHHHHTG----GG---------GGGEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHHHHHH----hc---------cCcEEEEecCCHHHHHHHHHH
Confidence 99999999999988876 887774 233 34443332 22 123456789999999999999
Q ss_pred ccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 432 AECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 432 ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
||++|+||. .||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|+++++++|
T Consensus 283 adv~v~ps~~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i 343 (406)
T 2gek_A 283 ADVYCAPHLGGESFGIVLVEAMAA-------------------GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAAL 343 (406)
T ss_dssp SSEEEECCCSCCSSCHHHHHHHHH-------------------TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHH
T ss_pred CCEEEecCCCCCCCchHHHHHHHc-------------------CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHH
Confidence 999999997 99999999999999 57899999988887774 48999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHh
Q 002955 508 DSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 551 (863)
.++++.+ +.+....++.++++..+++...++.+++-+++....
T Consensus 344 ~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 344 IGILEDD-QLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHCH-HHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999854 455555667778888899999999999888876544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=204.49 Aligned_cols=207 Identities=18% Similarity=0.135 Sum_probs=129.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC---
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY--- 667 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~--- 667 (863)
+|+|++||||||+ . ...+++ ++++|++| +++|+.|+|+|||+...+..++..+. ..++|++||+.|...+
T Consensus 2 ikli~~DlDGTLl-~---~~~~~~-~~~~l~~l-~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPDP-AKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSGG-GHHHHHHH-HHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred ccEEEEeCCCCcc-C---CCCcHH-HHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 6899999999999 3 344554 99999998 78899999999999999999887763 3579999999998763
Q ss_pred -----------ceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeee-------ccceeEeec------ccCCCCcchh
Q 002955 668 -----------GVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET-------KESALVWNF------QYADPDFGSC 723 (863)
Q Consensus 668 -----------~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~-------k~~~l~~~y------~~~d~~~~~~ 723 (863)
...+...++ .+.+.++++.+.+...-..+.. +...+.+.. +.....+...
T Consensus 76 ~~~~~~~~~~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIELGIR------VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW 149 (249)
T ss_dssp C------CCCCCCEEECSCC------HHHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEEC
T ss_pred cccccccccCceEEEecCCC------HHHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEec
Confidence 223333221 1223333332221100000000 000000000 0000000000
Q ss_pred hHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC-CcceEEEEeCCcchHHHHHHhhhhcCC
Q 002955 724 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM-LPDFVLCIGDDRSDEDMFEVIKSAAAG 802 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi-~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 802 (863)
...+..+.+.. ..+.+..+..++||.| ++|||.|+++|++++ |+ +++++++|||+.||++||+.+|.
T Consensus 150 ~~~~~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~Ml~~ag~---- 217 (249)
T 2zos_A 150 SRDGWEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVVDK---- 217 (249)
T ss_dssp SSSCHHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTSSE----
T ss_pred CCHHHHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHHHHhCCc----
Confidence 00000223332 2345556667899999 999999999999999 88 89999999999999999999986
Q ss_pred CCCCCCcceEEEEeCCCc-----cccceecCCHhH
Q 002955 803 PSLSPVAEVFACTVGQKP-----SKAKYYLDDTAE 832 (863)
Q Consensus 803 ~~~~~~~~~~av~vG~~~-----s~A~y~l~d~~e 832 (863)
+|+||+.. ..|+|+++++++
T Consensus 218 ----------~va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 218 ----------VFIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp ----------EEEESSCCCTTEEEESSHHHHHHHH
T ss_pred ----------EEEeCCCCccccchhceEEeccccc
Confidence 45666532 356776655443
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-20 Score=215.50 Aligned_cols=306 Identities=15% Similarity=0.108 Sum_probs=198.5
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhc------------CC--------------ChHHHH-HHH
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT------------LP--------------IRDELL-RAL 253 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~------------lp--------------~r~eil-~~l 253 (863)
|++++||||..++|.+||++.++++..|+.|- .++-|. +. ..-.++ .++
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~----telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga 258 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHA----TLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAA 258 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESS----CHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEec----chhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHH
Confidence 89999999999999999999999999999995 332222 11 011222 345
Q ss_pred HhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCc-hHHHHHHHH----
Q 002955 254 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLP-ETEAKVAEL---- 328 (863)
Q Consensus 254 l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~-~~~~~~~~l---- 328 (863)
..||.|---+..|++.-.. +++.. ...| +|+|||.+.|.+..... ......+++
T Consensus 259 ~~AD~ITTVS~~yA~Ei~~----Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l 317 (725)
T 3nb0_A 259 HSADVFTTVSQITAFEAEH----LLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFV 317 (725)
T ss_dssp HHSSEEEESSHHHHHHHHH----HTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEECCHHHHHHHHH----HhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHH
Confidence 6778877777766654332 33321 1122 89999998875420000 011112222
Q ss_pred HHHh-------CCCeEEEe-ecCcc-cccCHHHHHHHHHHHHHh--CCCCCCceEEEEEecCCCCCchhH-----HHHHH
Q 002955 329 QDQF-------KGQIVMLG-VDDMD-IFKGISLKLLAMEQLLSQ--NPSKRGKIVLVQIANPARGRGRDV-----QEVQS 392 (863)
Q Consensus 329 ~~~~-------~~~~vil~-Vdrld-~~KGi~~~l~A~~~ll~~--~p~~~~~vvLvqi~~p~r~~~~~~-----~~~~~ 392 (863)
+..+ .+++++++ ++|++ ..||++.++.|+.++... ..... +-|+..|..|+...+... +.+.+
T Consensus 318 ~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~ 396 (725)
T 3nb0_A 318 RGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVR 396 (725)
T ss_dssp HHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHH
T ss_pred HhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHH
Confidence 2322 24666666 79999 579999999999998643 11222 333333445554443221 11111
Q ss_pred HHHHHHH-------------------------------------------------------------------------
Q 002955 393 ETHATVR------------------------------------------------------------------------- 399 (863)
Q Consensus 393 ~v~~l~~------------------------------------------------------------------------- 399 (863)
++.+.+.
T Consensus 397 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il 476 (725)
T 3nb0_A 397 ALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLIL 476 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHH
Confidence 1111111
Q ss_pred ----HHhhccCCCCcccEEEEcCCCCHH------HHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCC
Q 002955 400 ----RINKIFGRPGYQPVVLIDTPLQFY------ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 469 (863)
Q Consensus 400 ----~IN~~~g~~~~~pv~~~~~~v~~~------el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~ 469 (863)
+++-.=...+...|+++.+.++.. ++..+|+.||+||+||.+||||++++|||||
T Consensus 477 ~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~--------------- 541 (725)
T 3nb0_A 477 NKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM--------------- 541 (725)
T ss_dssp HHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT---------------
T ss_pred HHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc---------------
Confidence 111000112345678888888876 5899999999999999999999999999999
Q ss_pred CCCCCccEEecccccCcccC-C---------CceEe---CCCCHHHHHHHHHHHh----CCCHHHHHHHHHHHhhhhccC
Q 002955 470 STAKSSMLVVSEFVGCSPSL-S---------GAIRV---NPWNIDAVAEAMDSAL----GVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 470 ~~~~~g~lVlSe~~G~~~~l-~---------~al~V---nP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v~~~ 532 (863)
+.|+|+|..+|+.+.+ + .|++| +|.|+++++++|.++| .+++.++....++.++....+
T Consensus 542 ----G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~F 617 (725)
T 3nb0_A 542 ----GVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLL 617 (725)
T ss_dssp ----TCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGG
T ss_pred ----CCCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 6789999999998766 2 37888 4567777666666665 456666666556666677789
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q 002955 533 DVAYWARSFLQDLERACRD 551 (863)
Q Consensus 533 ~~~~W~~~~l~~l~~~~~~ 551 (863)
+|..-++.+++..+++...
T Consensus 618 SWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 618 DWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp BHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999998887776654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.6e-21 Score=212.88 Aligned_cols=283 Identities=12% Similarity=0.140 Sum_probs=196.7
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhC-C-CCeEEEEEeCCCCChhHhhcCCChHHHH-HHHHhCCEecccCHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRF-N-RVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARH 269 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~-~~~i~~flH~PfP~~e~~r~lp~r~eil-~~ll~~dligF~t~~~~~~ 269 (863)
++..+| |+|++|..+...++.++.++. . ++|+.+.+|..++ ..+..-+....+. ..+-.+|.|-..+....+.
T Consensus 95 l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 170 (394)
T 2jjm_A 95 AQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINE 170 (394)
T ss_dssp HHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHH
T ss_pred HHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 344566 899999876555555554333 2 6899999996422 1111112222233 3345689998888776665
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI 346 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~ 346 (863)
+.+. .+. ..++.++|+|+|.+.|.... ...+++++ .++++|+++||+.+
T Consensus 171 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 171 THEL----VKP----------------NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp HHHH----TCC----------------SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCG
T ss_pred HHHh----hCC----------------cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeecccc
Confidence 5431 111 12456789999988775321 12344554 45789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|++++.++ ++++ |+++|. +++.++++ +++.+.+ ..+-+.+.|. .+++.
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~l~----~~~~~~~-------l~~~v~~~g~--~~~~~ 279 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VDAK----LLLVGD-----GPEFCTIL----QLVKNLH-------IEDRVLFLGK--QDNVA 279 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SCCE----EEEECC-----CTTHHHHH----HHHHTTT-------CGGGBCCCBS--CSCTH
T ss_pred ccCHHHHHHHHHHHHhh-CCCE----EEEECC-----chHHHHHH----HHHHHcC-------CCCeEEEeCc--hhhHH
Confidence 99999999999999876 4444 887773 33333343 3333321 1122234443 57899
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~ 503 (863)
.+|+.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~l 340 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLVLLEAMAC-------------------GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGV 340 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHHHHHHHHT-------------------TCCEEEECCTTSTTTCCBTTTEEEECTTCHHHH
T ss_pred HHHHhCCEEEeccccCCCchHHHHHHhc-------------------CCCEEEecCCChHHHhhcCCceEEeCCCCHHHH
Confidence 9999999999999999999999999999 56799999999888883 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERACR 550 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 550 (863)
|++|.++++. ++.++...++.++++ ..+++..+++.+++.++++.+
T Consensus 341 a~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 341 ADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHC-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999984 445555566677777 779999999999888876543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=236.15 Aligned_cols=308 Identities=12% Similarity=0.122 Sum_probs=207.2
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHH-------------HHHHHhCCEecccCHHHH
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL-------------LRALLNADLIGFHTFDYA 267 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~ei-------------l~~ll~~dligF~t~~~~ 267 (863)
|+|+.|++...+++.+++++. ++|+.++.|...+..-....+.| ..+ ...+-.||.|-..|...+
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred eEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHH
Confidence 999999877777777776665 78999999975421111100111 011 124567898888887655
Q ss_pred HHHHHHHHhhhCceecccC-----c----eeeEEEcCeEEEEEEeccccCchHHHhhcCCch----HHHHHHHH------
Q 002955 268 RHFLSCCSRMLGVSYQSKR-----G----YIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPE----TEAKVAEL------ 328 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~-----~----~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~----~~~~~~~l------ 328 (863)
++....+ + .+.... + .-++..... ++.++|+|||.+.|.+...... .......+
T Consensus 487 ~~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~ 559 (816)
T 3s28_A 487 AGSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559 (816)
T ss_dssp HCCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCC
T ss_pred HHHHHHH----H-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhh
Confidence 4321100 0 010000 0 000111112 6889999999998864332111 11111111
Q ss_pred -HHH-----hCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCC--CCCchhHHHHHHHHHHHHHH
Q 002955 329 -QDQ-----FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA--RGRGRDVQEVQSETHATVRR 400 (863)
Q Consensus 329 -~~~-----~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~--r~~~~~~~~~~~~v~~l~~~ 400 (863)
++. -.++++|++|||+++.||+..+++|+.++.+++|+++ |+++|... ....++..+..+++.+++++
T Consensus 560 ~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~ 635 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEE 635 (816)
T ss_dssp BTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHH
Confidence 111 1457899999999999999999999999988887766 88888654 12223344456666666666
Q ss_pred HhhccCCCCcccEEEEcC----CCCHHHHHHHHH-hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCc
Q 002955 401 INKIFGRPGYQPVVLIDT----PLQFYERIAYYV-IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 475 (863)
Q Consensus 401 IN~~~g~~~~~pv~~~~~----~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 475 (863)
.+ ....+.+.| .++.+|+..+|+ +||+||+||..||||++++||||| |.
T Consensus 636 lg-------L~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~-------------------G~ 689 (816)
T 3s28_A 636 YK-------LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-------------------GL 689 (816)
T ss_dssp TT-------CBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT-------------------TC
T ss_pred cC-------CCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc-------------------CC
Confidence 53 222334445 455799999998 689999999999999999999999 57
Q ss_pred cEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHh----CCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 476 MLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL----GVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 476 ~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
|+|+|..+|..+.+. .|++|+|.|++++|++|.+++ ..+ +.++...++.++++ ..+++..+++++++-.++
T Consensus 690 PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 799999999998882 489999999999999998877 544 45555666677777 779999999999887665
Q ss_pred H
Q 002955 548 A 548 (863)
Q Consensus 548 ~ 548 (863)
.
T Consensus 769 ~ 769 (816)
T 3s28_A 769 Y 769 (816)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-21 Score=205.93 Aligned_cols=220 Identities=15% Similarity=0.094 Sum_probs=139.7
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCce----
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV---- 669 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~---- 669 (863)
+|+|||||||++ +. .+++.+.++|+++ +++|+.|+++|||+...+. .++ ...+++++||+.+......
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~-~l~--~~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERL-RALGVPVVPVTAKTRKEVE-ALG--LEPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHH-HHTTCCEEEBCSSCHHHHH-HTT--CCSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHH-HcC--CCCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 56 8999999999998 7889999999999999998 332 2457899999999887653
Q ss_pred ------eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeec------cceeEeecc--cCCCCc------chhhHHHHH
Q 002955 670 ------DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETK------ESALVWNFQ--YADPDF------GSCQAKELL 729 (863)
Q Consensus 670 ------~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k------~~~l~~~y~--~~d~~~------~~~~a~el~ 729 (863)
.+..........+.+.+..+.+.|.... ..+.... ...+..... .....+ ......++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (259)
T 3zx4_A 74 GRPKGGYRVVSLAWPYRKVRARLREAEALAGRPI-LGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVL 152 (259)
T ss_dssp SEEETTEEEEECSCCHHHHHHHHHHHHHHHTSCC-CBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHH
T ss_pred cccCCceEEEEcCCCHHHHHHHHHHHHHhcCceE-EEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHH
Confidence 1111111111122332222222221110 0000000 000000000 000000 000123333
Q ss_pred HHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCc--ceEEEEeCCcchHHHHHHhhhhcCCCCCCC
Q 002955 730 DHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP--DFVLCIGDDRSDEDMFEVIKSAAAGPSLSP 807 (863)
Q Consensus 730 ~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~ 807 (863)
+.+. ...+.+..+..++||.|+ ++||.+++++++++ |+++ +++++|||+.||++||+.+|.++
T Consensus 153 ~~l~----~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag~~v------- 217 (259)
T 3zx4_A 153 EALE----AVGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVDLAV------- 217 (259)
T ss_dssp HHHH----HTTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSSEEE-------
T ss_pred HHHH----HCCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCCCeE-------
Confidence 3333 334566666677899999 99999999999999 9998 99999999999999999999754
Q ss_pred CcceEEEEeCCC-ccccceecC--CHhHHHHHHHHHHHhh
Q 002955 808 VAEVFACTVGQK-PSKAKYYLD--DTAEILRMLLGLAEAS 844 (863)
Q Consensus 808 ~~~~~av~vG~~-~s~A~y~l~--d~~eV~~~L~~L~~~~ 844 (863)
+||+. +-+|.|++. +.++|.++|+.+....
T Consensus 218 -------a~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~ 250 (259)
T 3zx4_A 218 -------YVGRGDPPEGVLATPAPGPEGFRYAVERYLLPR 250 (259)
T ss_dssp -------ECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC
T ss_pred -------EeCChhhcCCcEEeCCCCchHHHHHHHHHHHhC
Confidence 44432 125667764 4688999999987543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=179.54 Aligned_cols=188 Identities=16% Similarity=0.180 Sum_probs=144.7
Q ss_pred eccccCchHHH--hhcCCchHHHHHHHHHHHh--CCCeEEEeecCcc-cccCHHHHHHHHHHHH--HhCCCCCCceEEEE
Q 002955 303 LPVGIHIGQLQ--SVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD-IFKGISLKLLAMEQLL--SQNPSKRGKIVLVQ 375 (863)
Q Consensus 303 ~p~GId~~~~~--~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll--~~~p~~~~~vvLvq 375 (863)
+|+|||.+.|. +. .....+....+++++ .++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 58999999886 42 111223345677777 4677999999999 9999999999999998 7777765 888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|. ++ .+...++.+++.+.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+|
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~- 138 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL- 138 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-
Confidence 874 22 123444555555442 3555488999999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccC--CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
+.|+|+|...|..+.+ ..|++++|.|+++++++|.++++|.+++++...++.++++.+
T Consensus 139 ------------------G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 139 ------------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp ------------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 5789999999888877 348999999999999999999997666666666666665543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=199.22 Aligned_cols=244 Identities=11% Similarity=0.002 Sum_probs=180.3
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl 271 (863)
+++..+| |+|++|.++..++. .+..+.| .+.+|..++.... +|.+-+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~~----------------~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPVN----------------PVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCSC----------------CTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCccc----------------ceEEEEcCHHHHHHHh
Confidence 3444566 99999998865443 3445788 9999998864311 8888777765554332
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHH
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 351 (863)
+ ..++.++|+|+|.+.|..... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 113456899999987753211 123566899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|++++ +++ |+.+|. ++.. +++++++++.+ +-+.+.|.++.+|+..+|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~-----g~~~----~~l~~~~~~~~---------~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGP-----AWEP----EYFDEITRRYG---------STVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESC-----CCCH----HHHHHHHHHHT---------TTEEECCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeC-----cccH----HHHHHHHHHhC---------CCEEEeccCCHHHHHHHHHh
Confidence 999999886 444 888873 2332 23333444442 12356789999999999999
Q ss_pred ccceeeccc----------ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C----CceEeC
Q 002955 432 AECCLVTAV----------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S----GAIRVN 496 (863)
Q Consensus 432 ADv~vvtS~----------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~----~al~Vn 496 (863)
||++|+||. .||||++++|||+| +.|+|+|..+|..+.+ . .|++++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~~~~~g~~~~ 292 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS-------------------GTPVVGTGNGCLAEIVPSVGEVVGYGTD 292 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT-------------------TCCEEECCTTTHHHHGGGGEEECCSSSC
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhc-------------------CCCEEEcCCCChHHHhcccCCCceEEcC
Confidence 999999999 89999999999999 5679999998888877 3 489999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHh
Q 002955 497 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 497 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 551 (863)
| |++++|++|.++++ .++.++++ ..+++...++++++-++++.+.
T Consensus 293 ~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 293 F-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp C-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred C-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 9 99999999999987 22334444 5678899999998888876543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-19 Score=201.77 Aligned_cols=227 Identities=14% Similarity=0.122 Sum_probs=169.3
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-- 332 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 332 (863)
.+|.|-+.+....+.|.+. +|.. ..++.++|+|+|.+.|......+ ....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCC
Confidence 4899988888777766542 2321 12456789999999886543221 224556666
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 333 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 333 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
.++++|+++||+.+.||+..+++|+.++.++ +|+++ |+.+|... . +++ .+++++.+. .
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~g~-----~-~~~----~~~~~~~~~------~ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTL----LFVVGQDK-----P-RKF----EALAEKLGV------R 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEE----EEEESSSC-----C-HHH----HHHHHHHTC------G
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceE----EEEEcCCC-----H-HHH----HHHHHHcCC------C
Confidence 4678999999999999999999999988766 46554 88888422 1 233 333333321 0
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL- 489 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l- 489 (863)
..|.+ .|. .+++..+|+.||++|+||..||||++++|||+| +.|+|+|...|..+.+
T Consensus 253 ~~v~~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~ 310 (374)
T 2iw1_A 253 SNVHF-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA-------------------GLPVLTTAVCGYAHYIA 310 (374)
T ss_dssp GGEEE-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-------------------TCCEEEETTSTTTHHHH
T ss_pred CcEEE-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC-------------------CCCEEEecCCCchhhhc
Confidence 12444 444 468999999999999999999999999999999 5679999999988877
Q ss_pred --CCceEeC-CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 490 --SGAIRVN-PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 490 --~~al~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
..|++++ |.|+++++++|.++++. ++.++...++.++++.++++..|++.+.+-++.
T Consensus 311 ~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 311 DANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred cCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3589997 99999999999999984 455666667788888888989999988776653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-18 Score=181.17 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=150.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHH-------hhcCCCCeEEEEcCCChhhHHHHhhccC----CceEEcc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDN-------LCRDPKNVVFLVSGKDRDTLAEWFSSCE----GLGIAAE 658 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~-------L~~d~g~~V~I~TGR~~~~l~~~~~~l~----~l~liae 658 (863)
+++|+|+|||||||++ +. +++.+..++.+ ++.++|+.++++|||+...+..++..+. ...+++.
T Consensus 20 ~~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~ 94 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASD 94 (289)
T ss_dssp SCSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEET
T ss_pred CCCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeec
Confidence 3579999999999999 33 77777777773 4578999999999999999998887541 2346777
Q ss_pred CcEEEEe---CCceeEEe----ecCCCCccHHHHHHHHHHHHhhcC-----CCceeeeccceeEeecccCCCCcchhhHH
Q 002955 659 HGYFVRP---NYGVDWET----CVSVPDFSWKQIAEPVMKLYTETT-----DGSTIETKESALVWNFQYADPDFGSCQAK 726 (863)
Q Consensus 659 nGa~I~~---~~~~~w~~----~~~~~~~~w~~~v~~i~~~y~~~~-----~gs~ie~k~~~l~~~y~~~d~~~~~~~a~ 726 (863)
+|..+.. ++...+.. ..... ...+.+.++++.+.+.. ..+..+.+...+.++|+..++.. ..
T Consensus 95 ~g~~i~~~~~ng~~~~~~~~~~~~~~~--~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~ 168 (289)
T 3gyg_A 95 LGTEITYFSEHNFGQQDNKWNSRINEG--FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DK 168 (289)
T ss_dssp TTTEEEECCSSSTTEECHHHHHHHHTT--CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HH
T ss_pred CCceEEEEcCCCcEeecCchhhhhccc--CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----ch
Confidence 7777766 33322211 11111 12345556666554331 11112233444566666543321 11
Q ss_pred HHHHHHHHHhcCCCe--EEEE---------CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 727 ELLDHLESVLANEPV--SVKS---------GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 727 el~~~L~~~l~~~~~--~v~~---------g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
+....+...+...+. .+.. +..++|+.|.+.+|+.+++++++++ |++++++++|||+.||++|++.
T Consensus 169 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~ 245 (289)
T 3gyg_A 169 KNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQT 245 (289)
T ss_dssp HHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHh
Confidence 222333333333232 2322 2378999999999999999999999 9999999999999999999999
Q ss_pred hhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHHH
Q 002955 796 IKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAE 842 (863)
Q Consensus 796 ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~ 842 (863)
+|. +|+||+. +..|+|++.+ .++|++.|+++..
T Consensus 246 ag~--------------~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~ 284 (289)
T 3gyg_A 246 VGN--------------GYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIG 284 (289)
T ss_dssp SSE--------------EEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTC
T ss_pred CCc--------------EEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHH
Confidence 985 5677764 3668888865 4569999998765
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=161.89 Aligned_cols=161 Identities=11% Similarity=0.042 Sum_probs=118.6
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+.+|+++||+++.||+..+++|+.++ +++|+ +.|+.+|. ++..+++ .+++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~----~~~~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKI----KLLAQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHH----HHHHHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHH----HHHHHHcCC---------eE
Confidence 46899999999999999999999886 44455 44888873 3333333 344444321 33
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCc-cEEecc-cccCcccC-CC
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS-MLVVSE-FVGCSPSL-SG 491 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g-~lVlSe-~~G~~~~l-~~ 491 (863)
.+ +.++.+++..+|+.||++|+||..||||++++|||+| +. |+|++. .+|..+.+ .+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-------------------G~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-------------------GIVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-------------------TCCEEEECCTTCGGGGGCSSG
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-------------------CCCcEEeeCCCCchhhhccCC
Confidence 45 8999999999999999999999999999999999999 44 677744 45555555 45
Q ss_pred ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 002955 492 AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539 (863)
Q Consensus 492 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 539 (863)
+.+++|.|+++++++|.++++. ++.++...++.++++..+++..+++
T Consensus 119 ~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 119 RSLFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred ceEEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 7799999999999999999984 4555555566677776677666543
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=173.58 Aligned_cols=159 Identities=8% Similarity=0.027 Sum_probs=120.7
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCc-ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEe
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 377 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 377 (863)
.+.++|+|+|.+.|... .....+++.|++++|+ .+.||+..+++||.++.+++|+. .++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~-------------~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYI-------------NDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTT-------------TSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccc-------------ccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 35678999998766421 0011355678999996 68999999999999999998861 023488888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecC
Q 002955 378 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 378 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
.... . .+.+. ..-+.+.|.++.+|+.++|+.||+||+||..||||++++|||||
T Consensus 284 ~~~~---~-----------------~~l~~---~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--- 337 (413)
T 2x0d_A 284 EKHK---D-----------------IALGK---GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--- 337 (413)
T ss_dssp SCCC---C-----------------EEEET---TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT---
T ss_pred CCch---h-----------------hhcCC---cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC---
Confidence 4321 0 11121 12345678999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCC
Q 002955 458 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 458 ~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
|.|+|+ ...|+.+.+. +|++|+|.|++++|++|.++++.+
T Consensus 338 ----------------G~PVV~-~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 338 ----------------GLRVIT-NKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp ----------------TCEEEE-ECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred ----------------CCcEEE-eCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 456776 4567766652 489999999999999999999755
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.6e-16 Score=174.12 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=127.9
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
++.++|+|||.+.|...... ...++++|++|||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67889999999988643211 12344899999999999999 555667788765 888873
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeee------
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI------ 452 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~------ 452 (863)
|+ + .+. +..+-+.+.|.++.+++.++|+.||+||+||..||||++.+|||
T Consensus 256 -----g~---------------~-~~~---~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM---------------G-RHP---GYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS---------------C-CCT---TCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch---------------H-Hhc---CCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 22 1 111 22233456789999999999999999999999999999999999
Q ss_pred -eeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceE-eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhc
Q 002955 453 -ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIR-VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS 530 (863)
Q Consensus 453 -a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~-VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 530 (863)
|| |.|+|+|+. .. .-..|++ |+|.|++++|++|.++++.++ ++...
T Consensus 312 la~-------------------G~PVIas~~--v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~ 359 (406)
T 2hy7_A 312 DFF-------------------GLPAVCPNA--VV-GPYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQ 359 (406)
T ss_dssp HHH-------------------TCCEEEEGG--GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSC
T ss_pred hhC-------------------CCcEEEehh--cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhh
Confidence 99 567888887 11 1134888 999999999999999998774 14556
Q ss_pred cCCHHHHHHHHHHH
Q 002955 531 THDVAYWARSFLQD 544 (863)
Q Consensus 531 ~~~~~~W~~~~l~~ 544 (863)
.+++...++++++-
T Consensus 360 ~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 360 CLNWSDTTDRVLDP 373 (406)
T ss_dssp CCBHHHHHHHHHCG
T ss_pred cCCHHHHHHHHHHh
Confidence 78888888777643
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=168.53 Aligned_cols=279 Identities=15% Similarity=0.127 Sum_probs=171.5
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH-Hh-CCEecccCHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LN-ADLIGFHTFDYAR 268 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l-l~-~dligF~t~~~~~ 268 (863)
++++..+| |+|++|+.....++..+..+..++|+.+..|-.. +...+. ++...+.+-+ .. +|.+-..+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34455677 9999998534444544444455788887766432 222222 2223333333 23 8998888876666
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEecccc-CchHHHhhcCCchHHHHHHHHHHHhC----CC-eEEEeec
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQFK----GQ-IVMLGVD 342 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~vil~Vd 342 (863)
.|.+ .|+.. .++.++|+|+ |...+..... +.......++++++. ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 5543 24321 1245678884 4333221100 000011224555432 33 5788999
Q ss_pred Ccccc-cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002955 343 DMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 421 (863)
Q Consensus 343 rld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~ 421 (863)
|+... ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...| .+.+.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v-~~~g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNV-ILIDPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTE-EEECCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCE-EEeCCCC
Confidence 99987 999999999999999888765 6554322 22 234444443211 1134 4556788
Q ss_pred HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc-ccCcccC--CCceEeCCC
Q 002955 422 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF-VGCSPSL--SGAIRVNPW 498 (863)
Q Consensus 422 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~-~G~~~~l--~~al~VnP~ 498 (863)
..++..+|+.||++|.|| |.+.+|||+| +.|+|+|.. +|+.+.+ ..|++|+|
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~-------------------G~PvI~~~~~~~~~e~v~~g~g~lv~~- 327 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSL-------------------GKPVLVMRDTTERPEAVTAGTVRLVGT- 327 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGG-------------------TCCEEEESSCCSCHHHHHHTSEEEECS-
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHc-------------------CCCEEEccCCCCcchhhhCCceEEeCC-
Confidence 899999999999999999 4458999999 567899987 5555545 35899988
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 499 NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 499 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
|++++|++|.++|+.+ +.++...++.+++...+++...++.+.
T Consensus 328 d~~~la~~i~~ll~d~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 370 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKDE-NEYQAMSRAHNPYGDGQACSRILEALK 370 (384)
T ss_dssp SHHHHHHHHHHHHHCH-HHHHHHHSSCCTTCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCh-HHHhhhhhccCCCcCCCHHHHHHHHHH
Confidence 9999999999999854 344444444555555555555555443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=167.60 Aligned_cols=274 Identities=14% Similarity=0.119 Sum_probs=171.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEecccCHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHTFDYARH 269 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dligF~t~~~~~~ 269 (863)
+++..+| |+|++|......++..+..+..++|+.++.|. +.+...+. ++...+.+.++ .+|.+-..+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-LRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCC-CCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecc-cccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 4455677 89999975333333333333346788765553 32222222 33344555443 289988887766665
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccc-cCchHHHhhcCCchHHHHHHHHHHHhC-CCeEEEeecCcccc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVG-IHIGQLQSVLNLPETEAKVAELQDQFK-GQIVMLGVDDMDIF 347 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~vil~Vdrld~~ 347 (863)
+.+ .|+.. .++.++|+| +|...+....... .++++++. ++.++++++|+.+.
T Consensus 165 ~~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKDE---------------SRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCCG---------------GGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCCc---------------ccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccc
Confidence 543 23311 134568998 8877665321011 12334443 44567899999986
Q ss_pred -cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 348 -KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 348 -KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
||+..+++|+.++.+++|+++ ++. +. +++ .++++++.++.+. ...| .+.+.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~~---------~~~v-~~~g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILGD---------YGRI-HLIEPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHTT---------CTTE-EEECCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhhc---------cCCE-EEeCCCCHHHHH
Confidence 999999999999999898764 443 31 121 2344444444211 1124 455788899999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc-ccCcccC--CCceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF-VGCSPSL--SGAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~-~G~~~~l--~~al~VnP~d~~~~ 503 (863)
.+|+.||++|.|| |.+++|||+| +.|+|+|.. +|..+.+ ..|++|+| |++++
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~-------------------G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~l 332 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSL-------------------GVPVLVLRDTTERPEGIEAGTLKLAGT-DEETI 332 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHH-------------------TCCEEECSSCCSCHHHHHTTSEEECCS-CHHHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhc-------------------CCCEEEecCCCCCceeecCCceEEcCC-CHHHH
Confidence 9999999999999 5679999999 567888864 6665555 34788887 99999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
|++|.++++.+ +.++...++.+++...+++...++.+.+
T Consensus 333 a~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 333 FSLADELLSDK-EAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHCH-HHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCh-HhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 99999999854 3344333445555555655555554443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-15 Score=152.15 Aligned_cols=141 Identities=18% Similarity=0.141 Sum_probs=111.4
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.++++|+++||+++.||+..+++|++++ |+++ |+.+|... +.+++++ ++.++.. + ..+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l~~----~~~~~~~--~---l~~ 78 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHAER----YARKIMK--I---APD 78 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTHHH----HHHHHHH--H---SCT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHHHH----HHHhhhc--c---cCC
Confidence 4678899999999999999999999876 6665 88888432 2122333 3331111 1 111
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC--
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-- 490 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-- 490 (863)
-+.+.+.++.+++..+|+.||++|+||..||||++++|||+| +.|+|+|...|..+.+.
T Consensus 79 ~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 79 NVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-------------------GKPVIAVNEGGFKETVINE 139 (177)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-------------------TCCEEEESSHHHHHHCCBT
T ss_pred cEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc-------------------CCcEEEeCCCCHHHHhcCC
Confidence 234568999999999999999999999999999999999999 56799999988888773
Q ss_pred -CceEeCCCCHHHHHHHHHHHhCCCH
Q 002955 491 -GAIRVNPWNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 491 -~al~VnP~d~~~~A~ai~~aL~m~~ 515 (863)
.|+++ |.|+++++++|.+++++++
T Consensus 140 ~~g~~~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 140 KTGYLV-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHCTT
T ss_pred CccEEe-CCCHHHHHHHHHHHHhCHH
Confidence 47889 9999999999999998775
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=153.37 Aligned_cols=244 Identities=15% Similarity=0.132 Sum_probs=150.8
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEecccCHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHTFDYAR 268 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dligF~t~~~~~ 268 (863)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++...+.+.++ .+|.+-..+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34556677 999999876555654444444468875 5555543322222 22233333322 37888777766665
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccc-cCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCccc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVG-IHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDI 346 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 346 (863)
.|.+ .|+.. .++.++|++ +|...+... ..++++++ .++.++++++|+..
T Consensus 160 ~l~~-----~g~~~---------------~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKRE---------------EGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCCG---------------GGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCCc---------------ceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5543 13310 123445654 443322110 01122333 24557788999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|+.++.+++|+++ |+.++. +++ +++++++++++ . ...| .+.+.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~-------~--~~~v-~~~g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLK-------G--VRNF-VLLDPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHT-------T--CTTE-EEECCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhc-------c--CCCE-EEECCCCHHHHH
Confidence 9999999999999999899865 555432 222 23344444431 1 1134 455677888999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc-ccCcccC--CCceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF-VGCSPSL--SGAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~-~G~~~~l--~~al~VnP~d~~~~ 503 (863)
.+|+.||++|.+| +|+ .+|||+| +.|+|++.. +|+.+.+ ..|++|+ .|++++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~-------------------G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~l 324 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAAL-------------------GVPVVVLRNVTERPEGLKAGILKLAG-TDPEGV 324 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHT-------------------TCCEEECSSSCSCHHHHHHTSEEECC-SCHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHc-------------------CCCEEeccCCCcchhhhcCCceEECC-CCHHHH
Confidence 9999999999999 554 7799999 456777654 4544434 3478885 599999
Q ss_pred HHHHHHHhCCC
Q 002955 504 AEAMDSALGVS 514 (863)
Q Consensus 504 A~ai~~aL~m~ 514 (863)
|++|.++|+.+
T Consensus 325 a~~i~~ll~d~ 335 (376)
T 1v4v_A 325 YRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHHhCh
Confidence 99999999854
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=161.88 Aligned_cols=171 Identities=15% Similarity=0.076 Sum_probs=133.8
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc-c
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ-P 412 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~-p 412 (863)
+.+++++++|+.+ ||+..+++||.++++++|+++ |+++|. +++..++ +.+.+.+. +.. .
T Consensus 375 ~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~~----l~~~~~~~-------~l~~~ 434 (568)
T 2vsy_A 375 EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADAR----LRAFAHAQ-------GVDAQ 434 (568)
T ss_dssp TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHHH----HHHHHHHT-------TCCGG
T ss_pred CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHHH----HHHHHHHc-------CCChh
Confidence 4456779999999 999999999999999999876 888872 2343333 44444443 222 2
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe-------cccc--
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV-------SEFV-- 483 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl-------Se~~-- 483 (863)
-+.|.|.++.+++..+|+.||+||+||.+ |||++++|||+| |.|+|+ |..+
T Consensus 435 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~-------------------G~Pvv~~~g~~~~s~~~~~ 494 (568)
T 2vsy_A 435 RLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT-------------------GCPVLTTPGETFAARVAGS 494 (568)
T ss_dssp GEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT-------------------TCCEEBCCCSSGGGSHHHH
T ss_pred HEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC-------------------CCCEEeccCCCchHHHHHH
Confidence 34567899999999999999999999999 999999999999 567888 8888
Q ss_pred -----cCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHhh
Q 002955 484 -----GCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV---STHDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 484 -----G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~~ 552 (863)
|+.+.+.+ |+++++++|.++++.+ +.++...++.++.+ ..+++..+++.+.+-+++..+.+
T Consensus 495 ~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 495 LNHHLGLDEMNVA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp HHHHHTCGGGBCS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCChhhhcC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 87776543 8999999999999854 44444555566666 66999999999988888776543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-14 Score=152.32 Aligned_cols=215 Identities=14% Similarity=0.129 Sum_probs=119.7
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhhccC----CceEEccCcEEE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSCE----GLGIAAEHGYFV 663 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~l~----~l~liaenGa~I 663 (863)
++|+|+||+||||++ . +.+.++++++|+++ +++|+.|+++|| |+...+.+.+..+. .-++++.+|+.+
T Consensus 5 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l-~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 79 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN---G-TEKIEEACEFVRTL-KDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATA 79 (266)
T ss_dssp CCSEEEEECSSSTTC---H-HHHHHHHHHHHHHH-HHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEeCcCceEe---C-CEeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHH
Confidence 489999999999998 3 55678999999998 889999999988 66666666665431 011232222221
Q ss_pred Ee-----CCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHh--
Q 002955 664 RP-----NYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVL-- 736 (863)
Q Consensus 664 ~~-----~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l-- 736 (863)
.. .....+.. .. ..+...+..+ |..+........+. ..+.........+....+....
T Consensus 80 ~~~~~~~~~~~~~~~----~~----~~~~~~~~~~-----g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~ 144 (266)
T 3pdw_A 80 QHIAQQKKDASVYVI----GE----EGIRQAIEEN-----GLTFGGENADFVVV--GIDRSITYEKFAVGCLAIRNGARF 144 (266)
T ss_dssp HHHHHHCTTCEEEEE----SC----HHHHHHHHHT-----TCEECCTTCSEEEE--CCCTTCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHhhCCCCEEEEE----eC----hhHHHHHHHc-----CCccCCCCCCEEEE--eCCCCCCHHHHHHHHHHHHCCCeE
Confidence 10 00111110 00 1111111111 11111111111111 0111111112222222222100
Q ss_pred --cCCCeEEEE------C----------CcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhh
Q 002955 737 --ANEPVSVKS------G----------PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIK 797 (863)
Q Consensus 737 --~~~~~~v~~------g----------~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag 797 (863)
.+....... + ....|+.+.+..|+.+++.+++++ |++++++++|||+ .||++|++.+|
T Consensus 145 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG 221 (266)
T 3pdw_A 145 ISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAG 221 (266)
T ss_dssp EESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred EEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCC
Confidence 000000000 0 012345667888999999999999 9999999999999 89999999999
Q ss_pred hhcCCCCCCCCcceEEEEeCCC-----cc---ccceecCCHhHHHHHHHH
Q 002955 798 SAAAGPSLSPVAEVFACTVGQK-----PS---KAKYYLDDTAEILRMLLG 839 (863)
Q Consensus 798 ~~~~~~~~~~~~~~~av~vG~~-----~s---~A~y~l~d~~eV~~~L~~ 839 (863)
.. ++.|..|.. +. .|+|++++..++.+-.+.
T Consensus 222 ~~-----------~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 222 MD-----------TLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CE-----------EEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred Ce-----------EEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 74 245555531 22 599999999988776654
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-13 Score=150.71 Aligned_cols=258 Identities=14% Similarity=0.059 Sum_probs=160.3
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++++..+| |+|++|..... ++..+..+..++|+.+..|..+|..- ..++. -.+|.+...+.
T Consensus 90 ~~l~~~~p--Dvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~~~--------~~~~~--~~~d~v~~~~~------ 150 (364)
T 1f0k_A 90 AIMKAYKP--DVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAGLT--------NKWLA--KIATKVMQAFP------ 150 (364)
T ss_dssp HHHHHHCC--SEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCCHH--------HHHHT--TTCSEEEESST------
T ss_pred HHHHhcCC--CEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCcHH--------HHHHH--HhCCEEEecCh------
Confidence 34455577 99999965433 33333333446888888887665310 01110 12444332111
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCe-EEEeecCccccc
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQI-VMLGVDDMDIFK 348 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-vil~Vdrld~~K 348 (863)
. . + . ++.++|+|++...+.. +.. ..++ .. .+++ +++.+||+.+.|
T Consensus 151 ---------------~-~----~-~---~~~~i~n~v~~~~~~~----~~~---~~~~--~~~~~~~~il~~~g~~~~~k 197 (364)
T 1f0k_A 151 ---------------G-A----F-P---NAEVVGNPVRTDVLAL----PLP---QQRL--AGREGPVRVLVVGGSQGARI 197 (364)
T ss_dssp ---------------T-S----S-S---SCEECCCCCCHHHHTS----CCH---HHHH--TTCCSSEEEEEECTTTCCHH
T ss_pred ---------------h-h----c-C---CceEeCCccchhhccc----chh---hhhc--ccCCCCcEEEEEcCchHhHH
Confidence 0 0 1 1 3457899999887642 111 1111 11 3444 566678999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 349 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 349 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
|+..+++|++++.+ ++.++.++. +++ .++++ +++++. +. ..| .+.|.+ +++..+
T Consensus 198 ~~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~~l~----~~~~~~----~~---~~v-~~~g~~--~~~~~~ 251 (364)
T 1f0k_A 198 LNQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQSVE----QAYAEA----GQ---PQH-KVTEFI--DDMAAA 251 (364)
T ss_dssp HHHHHHHHHHHHGG-------GEEEEEECC----TTC-HHHHH----HHHHHT----TC---TTS-EEESCC--SCHHHH
T ss_pred HHHHHHHHHHHhcC-------CcEEEEEcC----Cch-HHHHH----HHHhhc----CC---Cce-EEecch--hhHHHH
Confidence 99999999998743 234433332 222 23333 333332 11 123 345566 789999
Q ss_pred HHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcc-------cC---CCceEeCCC
Q 002955 429 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP-------SL---SGAIRVNPW 498 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~-------~l---~~al~VnP~ 498 (863)
|+.||++|.|| | +++++|||+| +.|+|+|...|... .+ ..|++++|.
T Consensus 252 ~~~ad~~v~~s---g-~~~~~EAma~-------------------G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~ 308 (364)
T 1f0k_A 252 YAWADVVVCRS---G-ALTVSEIAAA-------------------GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP 308 (364)
T ss_dssp HHHCSEEEECC---C-HHHHHHHHHH-------------------TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG
T ss_pred HHhCCEEEECC---c-hHHHHHHHHh-------------------CCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccc
Confidence 99999999999 4 8999999999 56799999887632 33 248999998
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHhh
Q 002955 499 N--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 499 d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 552 (863)
| ++++|++|.++ .++.++...++.++++..+++..-++.+.+.+++..+.|
T Consensus 309 d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 309 QLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp GCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred cCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 8 99999999987 455666666667777777888877777777666655443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=6.5e-14 Score=148.73 Aligned_cols=214 Identities=16% Similarity=0.166 Sum_probs=118.5
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhhccC----CceEEccCcEEE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSCE----GLGIAAEHGYFV 663 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~l~----~l~liaenGa~I 663 (863)
++|+|+||+||||++ . ..+.+++.++|+++ ++.|+.|+++|| |+...+.+.+..+. .-.+++.||+..
T Consensus 7 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l-~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 81 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK---S-VTPIPEGVEGVKKL-KELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA 81 (268)
T ss_dssp CCSEEEEECBTTTEE---T-TEECHHHHHHHHHH-HHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEcCcCcEEC---C-CEeCcCHHHHHHHH-HHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence 589999999999998 3 34667899999998 889999999999 66667766665431 012333333321
Q ss_pred Ee-----CCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCcee-eeccceeEeecccCCCCcchhhHHHHHHHHHHHh-
Q 002955 664 RP-----NYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTI-ETKESALVWNFQYADPDFGSCQAKELLDHLESVL- 736 (863)
Q Consensus 664 ~~-----~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~i-e~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l- 736 (863)
.. .+...+. . .. ..+...+... |..+ ........+. ..+..+......+....+....
T Consensus 82 ~~~~~~~~~~~~~~--~--~~----~~l~~~~~~~-----g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 146 (268)
T 3qgm_A 82 RFIAREKPNAKVFT--T--GE----EGLIEELRLA-----GLEIVDYDEAEYLVV--GSNRKINFELMTKALRACLRGIR 146 (268)
T ss_dssp HHHHHHSTTCEEEE--C--CC----HHHHHHHHHT-----TCEECCTTTCSEEEE--CCCTTCBHHHHHHHHHHHHHTCE
T ss_pred HHHHhhCCCCeEEE--E--cC----HHHHHHHHHc-----CCeecCCCCCCEEEE--ecCCCCCHHHHHHHHHHHhCCCc
Confidence 10 0000000 0 00 0111111111 1111 1111111110 0111111111222222222210
Q ss_pred ---cCCCeEEEECC----------------cEEEE-ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHH
Q 002955 737 ---ANEPVSVKSGP----------------NIVEV-KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEV 795 (863)
Q Consensus 737 ---~~~~~~v~~g~----------------~~vEI-~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ 795 (863)
.+......... ...|. ...+..|+.+++.+++++ |++++++++|||+ .||+.|.+.
T Consensus 147 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~ 223 (268)
T 3qgm_A 147 YIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKA 223 (268)
T ss_dssp EEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHH
T ss_pred EEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHH
Confidence 01000000000 01233 456777899999999999 9999999999999 699999999
Q ss_pred hhhhcCCCCCCCCcceEEEEeCCCc----c--------ccceecCCHhHHHHHHH
Q 002955 796 IKSAAAGPSLSPVAEVFACTVGQKP----S--------KAKYYLDDTAEILRMLL 838 (863)
Q Consensus 796 ag~~~~~~~~~~~~~~~av~vG~~~----s--------~A~y~l~d~~eV~~~L~ 838 (863)
+|.. .+.|..|... . .|+|++++..++.++|+
T Consensus 224 ~g~~-----------~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 224 IGAE-----------TVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp HTCE-----------EEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred CCCc-----------EEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 9973 3566666531 2 68999999999888764
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=147.11 Aligned_cols=247 Identities=11% Similarity=-0.007 Sum_probs=151.8
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHH-HHhCCEecccCHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRA-LLNADLIGFHTFDYARH 269 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~-ll~~dligF~t~~~~~~ 269 (863)
++++..+| |+|+++.++++. .++.... . ++.+..+.--+.+ +.+. +-.+|.|-+++...++.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFWP--SLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCCH--HHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCcH--HHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHHH
Confidence 34566688 899988887764 3443221 1 5544433211111 2222 34589999999988776
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccC
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 349 (863)
|.+ +|+. +|.++|+|. |... ..+ ++.+. +++++++++ ..||
T Consensus 168 l~~-----~g~~-----------------ki~vi~n~~----f~~~-~~~---------~~~l~-~~vi~~~~~--~~k~ 208 (374)
T 2xci_A 168 FKT-----FGAK-----------------RVFSCGNLK----FICQ-KGK---------GIKLK-GEFIVAGSI--HTGE 208 (374)
T ss_dssp HHT-----TTCC-----------------SEEECCCGG----GCCC-CCS---------CCCCS-SCEEEEEEE--CGGG
T ss_pred HHH-----cCCC-----------------eEEEcCCCc----cCCC-cCh---------hhhhc-CCEEEEEeC--CCch
Confidence 643 1321 345566652 2111 001 01111 257777776 4689
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhH-HHHHHHHHHHHHHHhhccC--CCCcccEEEEcCCCCHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDV-QEVQSETHATVRRINKIFG--RPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~-~~~~~~v~~l~~~IN~~~g--~~~~~pv~~~~~~v~~~el~ 426 (863)
+..+++||.++.+++|+++ |+++| ++++. ++++ +++.+.+-.+. ..+. ..+++.+. ..|+.
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~~~l~----~~~~~~gl~~~~~~~~~-~~v~~~~~--~~dl~ 272 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENAKIFE----KKARDFGFKTSFFENLE-GDVILVDR--FGILK 272 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGHHHHH----HHHHHTTCCEEETTCCC-SSEEECCS--SSCHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHHHHHH----HHHHHCCCceEEecCCC-CcEEEECC--HHHHH
Confidence 9999999999999999887 88777 23432 2343 34444322110 0000 12344443 46899
Q ss_pred HHHHhccceeecc-cccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC----CCceEeCCCCH
Q 002955 427 AYYVIAECCLVTA-VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL----SGAIRVNPWNI 500 (863)
Q Consensus 427 aly~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l----~~al~VnP~d~ 500 (863)
.+|+.||++++|| ..|++|++++||||| +.|+|++ +..|+.+.+ .+|.++.|.|+
T Consensus 273 ~~y~~aDv~vl~ss~~e~gg~~~lEAmA~-------------------G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~ 333 (374)
T 2xci_A 273 ELYPVGKIAIVGGTFVNIGGHNLLEPTCW-------------------GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNE 333 (374)
T ss_dssp HHGGGEEEEEECSSSSSSCCCCCHHHHTT-------------------TCCEEECSCCTTSHHHHHHHHHTTCEEECCSH
T ss_pred HHHHhCCEEEECCcccCCCCcCHHHHHHh-------------------CCCEEECCCccChHHHHHHHHHCCCEEEeCCH
Confidence 9999999988876 557789999999999 4567765 556666544 35788889999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhhhhc
Q 002955 501 DAVAEAMDSALGVSDAEKQMRHEKHYRYVS 530 (863)
Q Consensus 501 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 530 (863)
+++|++|.++|+. +.++...++.++++.
T Consensus 334 ~~La~ai~~ll~d--~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 334 TELVTKLTELLSV--KKEIKVEEKSREIKG 361 (374)
T ss_dssp HHHHHHHHHHHHS--CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH--HHHHHHHHHHHHHHH
Confidence 9999999999974 444444445555443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=6e-14 Score=148.01 Aligned_cols=77 Identities=25% Similarity=0.302 Sum_probs=63.4
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C-------cc
Q 002955 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K-------PS 821 (863)
Q Consensus 751 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-------~s 821 (863)
|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|..+ +.|..|. . ..
T Consensus 184 ~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG~~~-----------~~v~~g~~~~~~~~~~~~ 249 (271)
T 2x4d_A 184 KAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCGMRA-----------LQVRTGKFRPSDEHHPEV 249 (271)
T ss_dssp CCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCEE-----------EEESSTTCCGGGGGCSSC
T ss_pred ceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCCCcE-----------EEEcCCCCCchhhcccCC
Confidence 55677889999999999999 99999999999998 9999999999852 4555562 1 13
Q ss_pred ccceecCCHhHHHHHHHHHH
Q 002955 822 KAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 822 ~A~y~l~d~~eV~~~L~~L~ 841 (863)
.|++++++..++.++|.++.
T Consensus 250 ~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 250 KADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp CCSEEESSHHHHHHHHHHHC
T ss_pred CCCEEeCCHHHHHHHHHhhc
Confidence 48899999999988876643
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-13 Score=142.37 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=58.2
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc--------
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------- 820 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------- 820 (863)
.|+.+.+.+|+.+++++++++ |++++++++|||+ .||++|++.+|..+ +.|+.|...
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~~-----------~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLET-----------ILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCEE-----------EEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCeE-----------EEECCCCCChhhhhhcC
Confidence 456788999999999999999 9999999999999 79999999999852 456666421
Q ss_pred cccceecCCHhHH
Q 002955 821 SKAKYYLDDTAEI 833 (863)
Q Consensus 821 s~A~y~l~d~~eV 833 (863)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 4688998887765
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.2e-12 Score=127.84 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=105.4
Q ss_pred cccceeEecCCccccCCCCC---C----CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 590 TKNRAILLDYDGTIMVPGSI---S----TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~---~----~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
+++|+|+||+||||++.... . ..+++++.++|++| ++.|+.++|+|||+...+...+..+ ++. .++
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~---~~~ 78 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKML-MDADIQVAVLSGRDSPILRRRIADL---GIK---LFF 78 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HHTTCEEEEEESCCCHHHHHHHHHH---TCC---EEE
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHH-HHCCCeEEEEeCCCcHHHHHHHHHc---CCc---eee
Confidence 45799999999999983100 1 13567899999998 7789999999999999888887643 110 000
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
.+
T Consensus 79 ---~~--------------------------------------------------------------------------- 80 (180)
T 1k1e_A 79 ---LG--------------------------------------------------------------------------- 80 (180)
T ss_dssp ---ES---------------------------------------------------------------------------
T ss_pred ---cC---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
..+|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+++.
T Consensus 81 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~~--------------~~~~~~~~~ 130 (180)
T 1k1e_A 81 -------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGTS--------------FAVADAPIY 130 (180)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCe--------------EEeCCccHH
Confidence 046999999999999 99999999999999999999999864 445542
Q ss_pred -ccccceecCC--HhHHH-HHHHHHHHhh
Q 002955 820 -PSKAKYYLDD--TAEIL-RMLLGLAEAS 844 (863)
Q Consensus 820 -~s~A~y~l~d--~~eV~-~~L~~L~~~~ 844 (863)
+..|+|++.+ ..++. ++++.+....
T Consensus 131 ~~~~ad~v~~~~~~~g~~~~~~~~~l~~~ 159 (180)
T 1k1e_A 131 VKNAVDHVLSTHGGKGAFREMSDMILQAQ 159 (180)
T ss_dssp HHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHHhc
Confidence 3678998865 45677 7777766543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=5.1e-12 Score=134.18 Aligned_cols=210 Identities=14% Similarity=0.143 Sum_probs=123.0
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhccC----CceEEccCcEE
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSSCE----GLGIAAEHGYF 662 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~l~----~l~liaenGa~ 662 (863)
++++.|+||+||||++ . ..+++.+.++|+++ ++.|+.|+++| ||+...+.+.+..+. .-.+++.||+.
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l-~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETL-KEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHH-HHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 5679999999999998 3 55778899999998 88899999999 999999888886541 11244444433
Q ss_pred EEeC-----CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhc
Q 002955 663 VRPN-----YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 737 (863)
Q Consensus 663 I~~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~ 737 (863)
+... +...+.. .. ..+...+..+ |..+............ +.......+.+.++.+. .
T Consensus 90 ~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~---~ 151 (271)
T 1vjr_A 90 AEHMLKRFGRCRIFLL----GT----PQLKKVFEAY-----GHVIDEENPDFVVLGF--DKTLTYERLKKACILLR---K 151 (271)
T ss_dssp HHHHHHHHCSCEEEEE----SC----HHHHHHHHHT-----TCEECSSSCSEEEECC--CTTCCHHHHHHHHHHHT---T
T ss_pred HHHHHHhCCCCeEEEE----cC----HHHHHHHHHc-----CCccCCCCCCEEEEeC--CCCcCHHHHHHHHHHHH---C
Confidence 2111 1111100 00 0111111111 1111000000011110 11111112222332221 1
Q ss_pred CCCeEEEECC------------------------cEEEE-ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHH
Q 002955 738 NEPVSVKSGP------------------------NIVEV-KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDED 791 (863)
Q Consensus 738 ~~~~~v~~g~------------------------~~vEI-~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~ 791 (863)
...+ +.++. ...|. .+.+.+|+.+++.+++++ |++++++++|||+ .||++
T Consensus 152 ~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~ 227 (271)
T 1vjr_A 152 GKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVK 227 (271)
T ss_dssp TCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHH
T ss_pred CCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHH
Confidence 1111 11111 11244 677889999999999999 9999999999999 69999
Q ss_pred HHHHhhhhcCCCCCCCCcceEEEEeCCCc--------cccceecCCHhHHHHHH
Q 002955 792 MFEVIKSAAAGPSLSPVAEVFACTVGQKP--------SKAKYYLDDTAEILRML 837 (863)
Q Consensus 792 Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~d~~eV~~~L 837 (863)
|++.+|.. ++.|..|... ..++|++++..++.++|
T Consensus 228 ~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 228 LGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999974 2345555421 26889999999988765
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-11 Score=134.16 Aligned_cols=251 Identities=16% Similarity=0.138 Sum_probs=155.9
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH--HhCCEecccCHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL--LNADLIGFHTFDYARH 269 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l--l~~dligF~t~~~~~~ 269 (863)
+++..+| |+|.+|+.-...+|..+..+..++|++. .|.+..+...+. |+.+++.+-+ -.+|++-..+....++
T Consensus 106 ~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~ 180 (396)
T 3dzc_A 106 VLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRAN 180 (396)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHH
T ss_pred HHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHH
Confidence 4456688 8999998777767766666666888763 344443333322 4556666665 3479988888888887
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEecc-ccCchHHHhhcCCchHHHHHHHHHHHhC----CCe-EEEeecC
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPV-GIHIGQLQSVLNLPETEAKVAELQDQFK----GQI-VMLGVDD 343 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~-GId~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-vil~Vdr 343 (863)
|.+ .|+.. + +|.+.++ ++|...+..... ........++++++. +++ +++..+|
T Consensus 181 l~~-----~G~~~--~-------------ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 181 LLQ-----ENYNA--E-------------NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HHH-----TTCCG--G-------------GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HHH-----cCCCc--C-------------cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 764 25421 1 1223333 455433221000 000011256666653 344 4556767
Q ss_pred cc-cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002955 344 MD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 422 (863)
Q Consensus 344 ld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~ 422 (863)
.. ..||+..+++|+.++.+++|+++ +|.++.+ ++ ++++.+++. + + ....| .+.++++.
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~---~----~--~~~~v-~~~~~lg~ 298 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKL---L----K--GVSNI-VLIEPQQY 298 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHH---T----T--TCTTE-EEECCCCH
T ss_pred cccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHH---H----c--CCCCE-EEeCCCCH
Confidence 54 34889999999999999999865 5554322 12 233344332 1 1 11234 45568888
Q ss_pred HHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC--CCceEeCCCC
Q 002955 423 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL--SGAIRVNPWN 499 (863)
Q Consensus 423 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l--~~al~VnP~d 499 (863)
.++..+|+.||++|.+| | |++ .||++| +.|+|++ +.++..+.+ ..+++|.+ |
T Consensus 299 ~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~-------------------G~PvV~~~~~~~~~e~v~~G~~~lv~~-d 353 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDS---G-GIQ-EEAPSL-------------------GKPVLVMRETTERPEAVAAGTVKLVGT-N 353 (396)
T ss_dssp HHHHHHHHHCSEEEESC---S-GGG-TTGGGG-------------------TCCEEECCSSCSCHHHHHHTSEEECTT-C
T ss_pred HHHHHHHHhcCEEEECC---c-cHH-HHHHHc-------------------CCCEEEccCCCcchHHHHcCceEEcCC-C
Confidence 99999999999999998 6 655 999999 4567777 455554434 23566654 8
Q ss_pred HHHHHHHHHHHhCCC
Q 002955 500 IDAVAEAMDSALGVS 514 (863)
Q Consensus 500 ~~~~A~ai~~aL~m~ 514 (863)
.++++++|.++|+.+
T Consensus 354 ~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 354 QQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCH
Confidence 999999999999753
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=138.21 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=114.9
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhccC----CceEEccCcEE
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSSCE----GLGIAAEHGYF 662 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~l~----~l~liaenGa~ 662 (863)
|++|+|+||+||||++ .++.+ +.+.++|+++ ++.|+.|+++| ||+...+.+.+..+. .-.+++.+|+.
T Consensus 3 m~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l-~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~ 77 (264)
T 3epr_A 3 LAYKGYLIDLDGTIYK---GKSRI-PAGERFIERL-QEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMAT 77 (264)
T ss_dssp CCCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHH
T ss_pred CCCCEEEEeCCCceEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHH
Confidence 4689999999999999 67777 8999999998 88899999999 888888887776431 01133333332
Q ss_pred EEeC-----CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhc
Q 002955 663 VRPN-----YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 737 (863)
Q Consensus 663 I~~~-----~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~ 737 (863)
+..- ....+.. .. +.+...+..+ |..+........+. ..+..+......+....+..
T Consensus 78 ~~~l~~~~~~~~~~~~----~~----~~l~~~l~~~-----g~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~l~~--- 139 (264)
T 3epr_A 78 VDYMNDMNRGKTAYVI----GE----EGLKKAIADA-----GYVEDTKNPAYVVV--GLDWNVTYDKLATATLAIQN--- 139 (264)
T ss_dssp HHHHHHHTCCSEEEEE----SC----HHHHHHHHHT-----TCEECSSSCSEEEE--CCCTTCCHHHHHHHHHHHHT---
T ss_pred HHHHHHhCCCCeEEEE----CC----HHHHHHHHHc-----CCcccCCcCCEEEE--eCCCCCCHHHHHHHHHHHHC---
Confidence 2110 0011100 00 1111111111 11111111111111 01111111122222222221
Q ss_pred CCCeEEEECC-------c----------------EEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHH
Q 002955 738 NEPVSVKSGP-------N----------------IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMF 793 (863)
Q Consensus 738 ~~~~~v~~g~-------~----------------~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf 793 (863)
...+.+.... . ..|....+-.|+.+++.+++++ |++++++++|||+ .||+.|.
T Consensus 140 ~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a 216 (264)
T 3epr_A 140 GALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEIL---NIPRNQAVMVGDNYLTDIMAG 216 (264)
T ss_dssp TCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHH---TSCGGGEEEEESCTTTHHHHH
T ss_pred CCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHh---CcCcccEEEECCCcHHHHHHH
Confidence 1111110000 0 0122344555677799999999 9999999999999 7999999
Q ss_pred HHhhhhcCCCCCCCCcceEEEEeCCCc------c--ccceecCCHhHH
Q 002955 794 EVIKSAAAGPSLSPVAEVFACTVGQKP------S--KAKYYLDDTAEI 833 (863)
Q Consensus 794 ~~ag~~~~~~~~~~~~~~~av~vG~~~------s--~A~y~l~d~~eV 833 (863)
+.+|.. .+.|..|... . .++|++++..++
T Consensus 217 ~~aG~~-----------~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 217 INNDID-----------TLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp HHHTCE-----------EEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred HHCCCe-----------EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 999973 2455556321 1 688888887654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-14 Score=156.74 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=55.4
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcce----EEEEeCCcchHHHHHHh----hhhcCCCCCCCCcceEEEEeCC--Ccc
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDF----VLCIGDDRSDEDMFEVI----KSAAAGPSLSPVAEVFACTVGQ--KPS 821 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~----vlaiGD~~ND~~Mf~~a----g~~~~~~~~~~~~~~~av~vG~--~~s 821 (863)
+.|.+++||.+++. +++++ |++|||+.||++||+.+ |.+ +++ .+. .+.
T Consensus 201 i~~~g~~K~~al~g---------i~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~------------vam-na~~~lk~ 258 (332)
T 1y8a_A 201 KAVGAGEKAKIMRG---------YCESKGIDFPVVVGDSISDYKMFEAARGLGGVA------------IAF-NGNEYALK 258 (332)
T ss_dssp BCCCHHHHHHHHHH---------HHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEE------------EEE-SCCHHHHT
T ss_pred ecCCCCCHHHHHhc---------cChhhcCceEEEEeCcHhHHHHHHHHhhcCCeE------------EEe-cCCHHHHh
Confidence 88999999999983 23456 99999999999999999 864 233 222 247
Q ss_pred ccceecC--CHhHHHHHHHHHHHhh
Q 002955 822 KAKYYLD--DTAEILRMLLGLAEAS 844 (863)
Q Consensus 822 ~A~y~l~--d~~eV~~~L~~L~~~~ 844 (863)
.|+|++. +.++|.++|+++....
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~ 283 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERK 283 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcC
Confidence 7999885 4889999999987543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=116.08 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=101.8
Q ss_pred hcccceeEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcE
Q 002955 589 RTKNRAILLDYDGTIMVPGS---I----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa 661 (863)
.+++|+|+||+||||++... . ...+++.+.++|++| ++.|+.++|+||++...+..++..+ ++. .+
T Consensus 6 ~~~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~l~~~---gl~---~~ 78 (162)
T 2p9j_A 6 VKKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLL-QKMGITLAVISGRDSAPLITRLKEL---GVE---EI 78 (162)
T ss_dssp HHHCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HTTTCEEEEEESCCCHHHHHHHHHT---TCC---EE
T ss_pred ccceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCH---hh
Confidence 34589999999999997210 0 123467889999998 8889999999999999888888643 110 00
Q ss_pred EEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCe
Q 002955 662 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPV 741 (863)
Q Consensus 662 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~ 741 (863)
+ .
T Consensus 79 ~--~---------------------------------------------------------------------------- 80 (162)
T 2p9j_A 79 Y--T---------------------------------------------------------------------------- 80 (162)
T ss_dssp E--E----------------------------------------------------------------------------
T ss_pred c--c----------------------------------------------------------------------------
Confidence 0 0
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-- 819 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 819 (863)
.+..|..+++++++++ |++++++++|||+.||+.|++.+|.. +.+++.
T Consensus 81 -------------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~~--------------~~~~~~~~ 130 (162)
T 2p9j_A 81 -------------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGFP--------------VAVRNAVE 130 (162)
T ss_dssp -------------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EECTTSCH
T ss_pred -------------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EEecCccH
Confidence 0345889999999998 99999999999999999999999863 334332
Q ss_pred --ccccceecCCHh--HHH-HHHHHHHH
Q 002955 820 --PSKAKYYLDDTA--EIL-RMLLGLAE 842 (863)
Q Consensus 820 --~s~A~y~l~d~~--eV~-~~L~~L~~ 842 (863)
...|+|++++.+ +++ ++++.+.+
T Consensus 131 ~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 131 EVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 356899987654 344 67777654
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.4e-10 Score=129.18 Aligned_cols=247 Identities=14% Similarity=0.154 Sum_probs=152.5
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHh--CCEecccCHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLN--ADLIGFHTFDYAR 268 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~--~dligF~t~~~~~ 268 (863)
++++..+| |+|.+|+.-...++..+..+..++|++ ..|.+..+...|+ |+++++.+-++. +|++-..+..+.+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34456688 899999976666665555555578874 3444433333332 445666655433 7998888988888
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEec-cccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCccc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILP-VGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDI 346 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 346 (863)
+|.+ .|+.. + +|.+.+ +++|...+...... . .+.++++ .++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~~~~~--~----~~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP--A-------------TIFVTGNTAIDALKTTVQKDY--H----HPILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHSCTTC--C----CHHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc--c-------------cEEEeCCchHHHHHhhhhhhc--c----hHHHHhccCCCEEEEEeCcccc
Confidence 8875 35421 1 122233 35665444211000 0 0122222 34456777888754
Q ss_pred -ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002955 347 -FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 425 (863)
Q Consensus 347 -~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el 425 (863)
-|++...++|+.++.+++|+++ +|.++.|. + .+++.+++. . +. +..| .+.++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~---~----~~--~~~v-~l~~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAI---L----GG--HERI-HLIEPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHH---H----TT--CTTE-EEECCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHH---h----CC--CCCE-EEeCCCCHHHH
Confidence 3789999999999999999865 55543221 2 233333332 1 11 1234 45568889999
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC--CCceEeCCCCHHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL--SGAIRVNPWNIDA 502 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l--~~al~VnP~d~~~ 502 (863)
..+|+.||++|.+| | |+ ..||++| +.|+|++ ..++..+.+ ..+++|.+ |.++
T Consensus 296 ~~l~~~ad~vv~~S---G-g~-~~EA~a~-------------------g~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~ 350 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G-GV-QEEAPGM-------------------GVPVLVLRDTTERPEGIEAGTLKLIGT-NKEN 350 (403)
T ss_dssp HHHHHHEEEEEECC---H-HH-HHHGGGT-------------------TCCEEECCSSCSCHHHHHHTSEEECCS-CHHH
T ss_pred HHHHHhcCEEEECC---c-cH-HHHHHHh-------------------CCCEEEecCCCcchhheeCCcEEEcCC-CHHH
Confidence 99999999998888 2 33 3899999 4567777 444444444 33677766 9999
Q ss_pred HHHHHHHHhCCC
Q 002955 503 VAEAMDSALGVS 514 (863)
Q Consensus 503 ~A~ai~~aL~m~ 514 (863)
++++|.++|+.+
T Consensus 351 l~~ai~~ll~~~ 362 (403)
T 3ot5_A 351 LIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHHHHHCH
T ss_pred HHHHHHHHHcCH
Confidence 999999999754
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.4e-11 Score=119.26 Aligned_cols=68 Identities=21% Similarity=0.267 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--H
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--T 830 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~ 830 (863)
.+|+.+++++++++ |++++++++|||+.||++|++.+|. ++++|+. +..|+|++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVGW--------------PVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCC--------------eEECCChhHHHHHhCCEEecCCCC
Confidence 56999999999999 9999999999999999999999985 4566653 3678898865 3
Q ss_pred hHHHHHHHHHH
Q 002955 831 AEILRMLLGLA 841 (863)
Q Consensus 831 ~eV~~~L~~L~ 841 (863)
+++++.+..+.
T Consensus 148 ~g~~~~l~~~l 158 (176)
T 3mmz_A 148 DGAIREIASWI 158 (176)
T ss_dssp TTHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 45555554443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.6e-10 Score=119.61 Aligned_cols=71 Identities=18% Similarity=0.167 Sum_probs=57.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C-------ccccce
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K-------PSKAKY 825 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-------~s~A~y 825 (863)
.+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|. . ...+++
T Consensus 177 ~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~ 242 (259)
T 2ho4_A 177 VGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPPYL 242 (259)
T ss_dssp CSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCCSE
T ss_pred ecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCCCE
Confidence 4556899999999999 99999999999998 999999999973 24555552 1 245888
Q ss_pred ecCCHhHHHHHHHH
Q 002955 826 YLDDTAEILRMLLG 839 (863)
Q Consensus 826 ~l~d~~eV~~~L~~ 839 (863)
++++..++.++|..
T Consensus 243 ~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 243 TCESFPHAVDHILQ 256 (259)
T ss_dssp EESCHHHHHHHHHH
T ss_pred EECCHHHHHHHHHH
Confidence 99999999887753
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-10 Score=115.63 Aligned_cols=143 Identities=19% Similarity=0.190 Sum_probs=103.0
Q ss_pred HhcccceeEecCCccccCCCC---CCC----CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCc
Q 002955 588 KRTKNRAILLDYDGTIMVPGS---IST----SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~~---~~~----~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenG 660 (863)
+..++|+|+||+||||++... ... ........+|++| ++.|+.++|+||++...+..++..+ ++. .
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~v~ivT~~~~~~~~~~l~~l---gl~---~ 94 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCA-LTSDIEVAIITGRKAKLVEDRCATL---GIT---H 94 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHH-HTTTCEEEEECSSCCHHHHHHHHHH---TCC---E
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHH-HHCCCeEEEEeCCChHHHHHHHHHc---CCc---e
Confidence 455789999999999997210 011 1233444578888 7789999999999998888877543 110 0
Q ss_pred EEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCC
Q 002955 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP 740 (863)
Q Consensus 661 a~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~ 740 (863)
++
T Consensus 95 ~~------------------------------------------------------------------------------ 96 (188)
T 2r8e_A 95 LY------------------------------------------------------------------------------ 96 (188)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred ee------------------------------------------------------------------------------
Confidence 00
Q ss_pred eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--
Q 002955 741 VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-- 818 (863)
Q Consensus 741 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-- 818 (863)
+.+..|+.+++++++++ |++++++++|||+.||++|++.+|.. +.+++
T Consensus 97 -------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~~--------------~~~~~~~ 146 (188)
T 2r8e_A 97 -------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGLS--------------VAVADAH 146 (188)
T ss_dssp -------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSEE--------------EECTTSC
T ss_pred -------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCE--------------EEecCcC
Confidence 01356899999999999 99999999999999999999999864 34443
Q ss_pred --CccccceecCCH--hHHH-HHHHHHHHhhc
Q 002955 819 --KPSKAKYYLDDT--AEIL-RMLLGLAEASA 845 (863)
Q Consensus 819 --~~s~A~y~l~d~--~eV~-~~L~~L~~~~~ 845 (863)
.+..|+|++++. .+++ ++++.+.....
T Consensus 147 ~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~ 178 (188)
T 2r8e_A 147 PLLIPRADYVTRIAGGRGAVREVCDLLLLAQG 178 (188)
T ss_dssp TTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcC
Confidence 245789998764 4455 77887766543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-10 Score=114.03 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC--Hh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~ 831 (863)
+|+.+++++++++ |++++++++|||+.||++|++.+|.+ ++|++. +..|+|++.+ .+
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag~~--------------~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVGLS--------------AVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSSEE--------------EECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCCCE--------------EEeCChhHHHHHhCCEEeCCCCCc
Confidence 4999999999999 99999999999999999999999864 555553 5889999854 34
Q ss_pred H-HHHHHHHHHHh
Q 002955 832 E-ILRMLLGLAEA 843 (863)
Q Consensus 832 e-V~~~L~~L~~~ 843 (863)
+ +.++++.+...
T Consensus 146 G~~~~~~~~il~~ 158 (168)
T 3ewi_A 146 GAIREFAEHIFLL 158 (168)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh
Confidence 5 44566655544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.5e-11 Score=129.79 Aligned_cols=228 Identities=16% Similarity=0.127 Sum_probs=123.3
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhccCC-
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSSCEG- 652 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~l~~- 652 (863)
.++.+.+.+- ..++|+|+||+||||++ . ..+.+.+.++|++| ++.|+.|+++| ||+...+...+..+.-
T Consensus 8 ~~~~~~~~~~--~~~~k~i~~D~DGTL~~---~-~~~~~~~~~~l~~l-~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 8 RLRGAALRDV--LGRAQGVLFDCDGVLWN---G-ERAVPGAPELLERL-ARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ECCHHHHHHH--HHHCSEEEECSBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHH--HhhCCEEEECCCCcEec---C-CccCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 3555555442 22478999999999998 2 34567899999998 88899999999 6888887777754411
Q ss_pred ----ceEEccCcEEEEeC----------CceeEEeecCCCCccHHHHHHHHHHHHhhc-CCC---ceeeeccceeEeecc
Q 002955 653 ----LGIAAEHGYFVRPN----------YGVDWETCVSVPDFSWKQIAEPVMKLYTET-TDG---STIETKESALVWNFQ 714 (863)
Q Consensus 653 ----l~liaenGa~I~~~----------~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~-~~g---s~ie~k~~~l~~~y~ 714 (863)
-.+++.||+.+..- +...+. .. . ..+...+....-. ... .+............
T Consensus 81 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~--~g--~----~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~- 151 (306)
T 2oyc_A 81 GLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV--LG--G----EGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVG- 151 (306)
T ss_dssp SCCGGGEEEHHHHHHHHHHHHCCSCSSSCCEEEE--ES--C----HHHHHHHHHTTCEETTSCCCC---CCCEEEEEEC-
T ss_pred cCChhhEEcHHHHHHHHHHhhCCccccCCCeEEE--EC--C----HHHHHHHHHCCCEeecccccccccCCCCCEEEEe-
Confidence 12333333222110 111111 00 0 1111111111000 000 00001111111111
Q ss_pred cCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCc-EE------------------------EEecCCCCHHHHHHHHHHH
Q 002955 715 YADPDFGSCQAKELLDHLESVLANEPVSVKSGPN-IV------------------------EVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 715 ~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~-~v------------------------EI~p~gvsKG~al~~Ll~~ 769 (863)
.+.......+.++++.|.+ .....+.++.. .. +....+..|+.+++.++++
T Consensus 152 -~~~~~~~~~~~~~l~~l~~---~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 227 (306)
T 2oyc_A 152 -YDEHFSFAKLREACAHLRD---PECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITEN 227 (306)
T ss_dssp -CCTTCCHHHHHHHHHHHTS---TTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHHHc---CCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHH
Confidence 1111222233344444432 11122222111 11 2234567788899999999
Q ss_pred HhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------------ccccceecCCHhHHH
Q 002955 770 MHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------------PSKAKYYLDDTAEIL 834 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------------~s~A~y~l~d~~eV~ 834 (863)
+ |++++++++|||+. ||+.|.+.+|.. ++.|..|.. ...++|++++..++.
T Consensus 228 l---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~ 293 (306)
T 2oyc_A 228 F---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLT 293 (306)
T ss_dssp S---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGG
T ss_pred c---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHH
Confidence 9 99999999999995 999999999974 234444532 135788888888876
Q ss_pred HHHH
Q 002955 835 RMLL 838 (863)
Q Consensus 835 ~~L~ 838 (863)
++|+
T Consensus 294 ~~l~ 297 (306)
T 2oyc_A 294 EGLE 297 (306)
T ss_dssp GGC-
T ss_pred HHHH
Confidence 6554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.8e-10 Score=113.30 Aligned_cols=73 Identities=16% Similarity=0.085 Sum_probs=60.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcc-eEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-cccceecCCHh
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPD-FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-SKAKYYLDDTA 831 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d-~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-s~A~y~l~d~~ 831 (863)
..+-.|+.+++.+++++ |++++ ++++|||+.||+.|++.+|.. +|.+|+.. ..+.+.+++..
T Consensus 156 ~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~~-------------~v~~~~~~~~~~~~~~~~~~ 219 (231)
T 3kzx_A 156 GTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGCL-------------PIKYGSTNIIKDILSFKNFY 219 (231)
T ss_dssp SCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTCE-------------EEEECC-----CCEEESSHH
T ss_pred CCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCCe-------------EEEECCCCCCCCceeeCCHH
Confidence 34556789999999999 99998 999999999999999999962 56777654 47888999999
Q ss_pred HHHHHHHHHHH
Q 002955 832 EILRMLLGLAE 842 (863)
Q Consensus 832 eV~~~L~~L~~ 842 (863)
++.++|.++.+
T Consensus 220 el~~~l~~~l~ 230 (231)
T 3kzx_A 220 DIRNFICQLIN 230 (231)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=116.96 Aligned_cols=135 Identities=19% Similarity=0.158 Sum_probs=94.8
Q ss_pred cccceeEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 590 TKNRAILLDYDGTIMVPGS---I----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
..+|+++||+||||++... . .......--.+|+.| ++.|+.++|+||++...+...+..+ ++..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~~~ivTn~~~~~~~~~l~~l---gl~~----- 87 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLL-MAAGIQVAIITTAQNAVVDHRMEQL---GITH----- 87 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHH-HHTTCEEEEECSCCSHHHHHHHHHH---TCCE-----
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHH-HHCCCeEEEEeCcChHHHHHHHHHc---CCcc-----
Confidence 4579999999999997211 1 112222223358887 7779999999999988887777543 1100
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
+ ....
T Consensus 88 ~-~~~~-------------------------------------------------------------------------- 92 (191)
T 3n1u_A 88 Y-YKGQ-------------------------------------------------------------------------- 92 (191)
T ss_dssp E-ECSC--------------------------------------------------------------------------
T ss_pred c-eeCC--------------------------------------------------------------------------
Confidence 0 0000
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++++.
T Consensus 93 --------------kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 141 (191)
T 3n1u_A 93 --------------VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVGL--------------GVAVSNAVPQ 141 (191)
T ss_dssp --------------SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHH
T ss_pred --------------CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEeCCccHH
Confidence 35899999999999 9999999999999999999999986 3556653
Q ss_pred -ccccceecCC--HhHHHHHHHH
Q 002955 820 -PSKAKYYLDD--TAEILRMLLG 839 (863)
Q Consensus 820 -~s~A~y~l~d--~~eV~~~L~~ 839 (863)
+..|+|++.+ .+++++.+..
T Consensus 142 ~~~~ad~v~~~~~~~g~~~~l~~ 164 (191)
T 3n1u_A 142 VLEFADWRTERTGGRGAVRELCD 164 (191)
T ss_dssp HHHHSSEECSSCTTTTHHHHHHH
T ss_pred HHHhCCEEecCCCCCcHHHHHHH
Confidence 4678998865 3454444443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=8.4e-11 Score=115.20 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCH--
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDT-- 830 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~-- 830 (863)
-.|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+++. +..|+|++.+.
T Consensus 78 kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~~--------------~~~~~~~~~~~~~ad~v~~~~~~ 140 (164)
T 3e8m_A 78 VDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVGIA--------------GVPASAPFYIRRLSTIFLEKRGG 140 (164)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSSEE--------------ECCTTSCHHHHTTCSSCCCCCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EEcCChHHHHHHhCcEEeccCCC
Confidence 45999999999999 99999999999999999999999864 334432 46788988652
Q ss_pred hH-HHHHHHHHH
Q 002955 831 AE-ILRMLLGLA 841 (863)
Q Consensus 831 ~e-V~~~L~~L~ 841 (863)
++ +.++++.+.
T Consensus 141 ~g~~~e~~~~ll 152 (164)
T 3e8m_A 141 EGVFREFVEKVL 152 (164)
T ss_dssp TTHHHHHHHHHT
T ss_pred CcHHHHHHHHHH
Confidence 33 667777665
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-10 Score=114.58 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD 829 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d 829 (863)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++|+. +..|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVGL--------------GMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCCC--------------eEEeCCccHHHHHhCCEEecC
Confidence 57999999999999 9999999999999999999999986 4566653 3678898865
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-10 Score=117.64 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=64.6
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccce
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKY 825 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y 825 (863)
..+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|++|.. +..|+|
T Consensus 137 ~~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~ 202 (226)
T 3mc1_A 137 LDGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGANY 202 (226)
T ss_dssp TTSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCSE
T ss_pred CCCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCCE
Confidence 3467888999999999999 99999999999999999999999973 356777753 367899
Q ss_pred ecCCHhHHHHHHHHHHHh
Q 002955 826 YLDDTAEILRMLLGLAEA 843 (863)
Q Consensus 826 ~l~d~~eV~~~L~~L~~~ 843 (863)
++++.+++.++|......
T Consensus 203 v~~s~~el~~~~~~~~~~ 220 (226)
T 3mc1_A 203 IVNSVDELHKKILELREG 220 (226)
T ss_dssp EESSHHHHHHHHHTC---
T ss_pred EECCHHHHHHHHHHHhcc
Confidence 999999999988765543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-10 Score=115.89 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=97.2
Q ss_pred cccceeEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 590 TKNRAILLDYDGTIMVPGS---I----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~---~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
.++|+|+||+||||++... . ...........|+.| ++.|+.++|+||++...+..++..+ ++-
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~G~~~~ivT~~~~~~~~~~l~~l---gi~------ 92 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKAL-MNAGIEIAIITGRRSQIVENRMKAL---GIS------ 92 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHH-HHTTCEEEEECSSCCHHHHHHHHHT---TCC------
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHH-HHCCCEEEEEECcCHHHHHHHHHHc---CCc------
Confidence 4579999999999997211 0 112222333457777 7779999999999988887777543 110
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
. + |. .
T Consensus 93 -------~------------------------------~-----------~~-~-------------------------- 97 (195)
T 3n07_A 93 -------L------------------------------I-----------YQ-G-------------------------- 97 (195)
T ss_dssp -------E------------------------------E-----------EC-S--------------------------
T ss_pred -------E------------------------------E-----------ee-C--------------------------
Confidence 0 0 00 0
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
.-+|+.+++++++++ |++++++++|||+.||++|++.+|. ++++++.
T Consensus 98 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag~--------------~va~~na~~~ 147 (195)
T 3n07_A 98 -------------QDDKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVAL--------------RVCVADGHPL 147 (195)
T ss_dssp -------------CSSHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCCC--------------EEEECChHHH
Confidence 035999999999999 9999999999999999999999986 4566653
Q ss_pred -ccccceecCC--HhHH-HHHHHHHHHh
Q 002955 820 -PSKAKYYLDD--TAEI-LRMLLGLAEA 843 (863)
Q Consensus 820 -~s~A~y~l~d--~~eV-~~~L~~L~~~ 843 (863)
+..|+|++.+ .+++ .++++.+...
T Consensus 148 ~~~~ad~v~~~~~~~G~~~~~~~~il~~ 175 (195)
T 3n07_A 148 LAQRANYVTHIKGGHGAVREVCDLILQA 175 (195)
T ss_dssp HHHHCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HHHhCCEEEcCCCCCCHHHHHHHHHHHh
Confidence 4678998854 4454 4455555443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.1e-10 Score=115.75 Aligned_cols=65 Identities=22% Similarity=0.290 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCC--
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDD-- 829 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d-- 829 (863)
.+.+|+.++..+++++ |++++++++|||+.||++|++.+|.+ +.++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~~--------------~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGLK--------------IAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSEE--------------EEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCCE--------------EEECCCHHHHhhcceeecchh
Confidence 4789999999999999 99999999999999999999999863 445532 3568898876
Q ss_pred HhHHHHH
Q 002955 830 TAEILRM 836 (863)
Q Consensus 830 ~~eV~~~ 836 (863)
.+++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=108.32 Aligned_cols=67 Identities=15% Similarity=0.063 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------ccccceecCCH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 830 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~d~ 830 (863)
+...++.+++++ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...|+|++++.
T Consensus 103 ~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l 168 (179)
T 3l8h_A 103 LPGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDL 168 (179)
T ss_dssp SSHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSH
T ss_pred CHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCH
Confidence 355688999999 99999999999999999999999973 356666652 25689999999
Q ss_pred hHHHHHHHH
Q 002955 831 AEILRMLLG 839 (863)
Q Consensus 831 ~eV~~~L~~ 839 (863)
.++.++|.+
T Consensus 169 ~el~~~l~~ 177 (179)
T 3l8h_A 169 AAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888753
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=111.06 Aligned_cols=70 Identities=21% Similarity=0.169 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----CccccceecCCH--
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDT-- 830 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l~d~-- 830 (863)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++++ .+..|+|++.+.
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag~--------------~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVGL--------------SVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSSE--------------EEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCCC--------------EEEeCCccHHHHhhCCEEEeCCCC
Confidence 45999999999999 9999999999999999999999986 455554 246789998654
Q ss_pred hH-HHHHHHHHHHh
Q 002955 831 AE-ILRMLLGLAEA 843 (863)
Q Consensus 831 ~e-V~~~L~~L~~~ 843 (863)
++ |.++++.+...
T Consensus 186 ~G~v~e~~~~ll~~ 199 (211)
T 3ij5_A 186 RGAVREVCDLILLA 199 (211)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 22 55666666553
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.2e-10 Score=116.54 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=53.4
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C----c-cccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K----P-SKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~-s~A~y~l 827 (863)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|..+ +.+..|. . + ..|+|++
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~~-----------~~~~~~~~~~~~l~~~~ad~v~ 207 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVSF-----------TGVTSGMTTAQEFQAYPYDRII 207 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCEE-----------EEETTSSCCTTGGGGSCCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCeE-----------EEECCCCCChHHHhhcCCCEEE
Confidence 44566789999999999 999999999999999999999999742 2333332 1 1 2389999
Q ss_pred CCHhHHHHHHHHHHH
Q 002955 828 DDTAEILRMLLGLAE 842 (863)
Q Consensus 828 ~d~~eV~~~L~~L~~ 842 (863)
++.+++.+.|+.+..
T Consensus 208 ~~~~el~~~l~~~~~ 222 (225)
T 3d6j_A 208 STLGQLISVPEDKSG 222 (225)
T ss_dssp SSGGGGC--------
T ss_pred CCHHHHHHhhhhhcC
Confidence 999999998887764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.96 E-value=9.6e-10 Score=113.38 Aligned_cols=73 Identities=21% Similarity=0.278 Sum_probs=62.5
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------cccccee
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYY 826 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~ 826 (863)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|.. ...|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 456778999999999999 99999999999999999999999973 356777742 2479999
Q ss_pred cCCHhHHHHHHHH
Q 002955 827 LDDTAEILRMLLG 839 (863)
Q Consensus 827 l~d~~eV~~~L~~ 839 (863)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999988864
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-09 Score=109.70 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=61.4
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--C----
Q 002955 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--K---- 819 (863)
Q Consensus 746 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~---- 819 (863)
...+.++.+.+.+|+..++.+.+.+ |++++++++|||+.||++|++ +|.. .+++.+|. .
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~-----------~~~v~~~~~~~~~~~ 200 (219)
T 3kd3_A 136 DGSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYA-----------TKFIAYMEHIEREKV 200 (219)
T ss_dssp TSBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSC-----------SEEEEECSSCCCHHH
T ss_pred CCceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCC-----------cEEEeccCccccHHH
Confidence 3456678888999999999999988 999999999999999999995 5642 13455543 2
Q ss_pred ccccceecCCHhHHHHHH
Q 002955 820 PSKAKYYLDDTAEILRML 837 (863)
Q Consensus 820 ~s~A~y~l~d~~eV~~~L 837 (863)
+..|+|++++.+++.++|
T Consensus 201 ~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 201 INLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHCSEEESSHHHHHHHH
T ss_pred HhhcceeeCCHHHHHHhh
Confidence 356999999999988765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=109.94 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----CccccceecCCH
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDT 830 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l~d~ 830 (863)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +|.|++ .+..|+|++++.
T Consensus 125 ~~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGTR-------------TVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCE-------------EEEEeCCCCcccccCCEEeCCH
Confidence 3445788999999999 99999999999999999999999972 455554 246799999999
Q ss_pred hHHHHHHHH
Q 002955 831 AEILRMLLG 839 (863)
Q Consensus 831 ~eV~~~L~~ 839 (863)
+++.+.|+.
T Consensus 189 ~el~~~~~~ 197 (205)
T 3m9l_A 189 AQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888765
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.92 E-value=4.1e-09 Score=108.11 Aligned_cols=70 Identities=17% Similarity=0.224 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhcC--CCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc------cccceecCCH
Q 002955 759 KGLVAQHQLETMHQKG--MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP------SKAKYYLDDT 830 (863)
Q Consensus 759 KG~al~~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l~d~ 830 (863)
+..+++.+++++ | ++++++++|||+.||+.|++.+|.. +++|..|... ..|+|++++.
T Consensus 153 ~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~~ 218 (234)
T 2hcf_A 153 PHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNF 218 (234)
T ss_dssp HHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCS
T ss_pred HHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCCH
Confidence 567788999999 9 8999999999999999999999974 3566666432 2389999999
Q ss_pred hHHHHHHHHHHH
Q 002955 831 AEILRMLLGLAE 842 (863)
Q Consensus 831 ~eV~~~L~~L~~ 842 (863)
+++.++|+.+..
T Consensus 219 ~el~~~l~~~~~ 230 (234)
T 2hcf_A 219 AETDEVLASILT 230 (234)
T ss_dssp CCHHHHHHHHHC
T ss_pred HhHHHHHHHHhc
Confidence 999999988763
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.91 E-value=5.3e-10 Score=114.81 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc----cccceecCC
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDD 829 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~d 829 (863)
.+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|+.. ..|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~~ 218 (234)
T 3u26_A 153 FFKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSD 218 (234)
T ss_dssp BCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEESS
T ss_pred CCCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeCC
Confidence 3445688899999999 99999999999997 999999999973 3566666532 489999999
Q ss_pred HhHHHHHHHHHHH
Q 002955 830 TAEILRMLLGLAE 842 (863)
Q Consensus 830 ~~eV~~~L~~L~~ 842 (863)
..++.++|+.+..
T Consensus 219 ~~el~~~l~~~~~ 231 (234)
T 3u26_A 219 LREVIKIVDELNG 231 (234)
T ss_dssp THHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988743
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.9e-11 Score=122.43 Aligned_cols=72 Identities=10% Similarity=0.004 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD 829 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d 829 (863)
.+-.|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.|..|.. ...|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~ 218 (230)
T 3vay_A 153 IGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIHN 218 (230)
T ss_dssp CCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEESS
T ss_pred CCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeECC
Confidence 4455799999999999 99999999999997 999999999974 233444432 4578999999
Q ss_pred HhHHHHHHHHH
Q 002955 830 TAEILRMLLGL 840 (863)
Q Consensus 830 ~~eV~~~L~~L 840 (863)
..++.++|++.
T Consensus 219 l~el~~~l~~~ 229 (230)
T 3vay_A 219 LSQLPEVLARW 229 (230)
T ss_dssp GGGHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999998764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-09 Score=110.27 Aligned_cols=68 Identities=10% Similarity=0.082 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcce-EEEEeCCCc-----cccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEV-FACTVGQKP-----SKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~~-----s~A~y~l~d~~ 831 (863)
.|...++.+++++ |++++++++|||+.||+.|.+.+|.. . +.|..|... ..|+|++++..
T Consensus 132 P~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~l~ 197 (211)
T 2gmw_A 132 PHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNSLA 197 (211)
T ss_dssp TSCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESCGG
T ss_pred CCHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCCHH
Confidence 3567889999999 99999999999999999999999973 3 455555421 35889999999
Q ss_pred HHHHHHHH
Q 002955 832 EILRMLLG 839 (863)
Q Consensus 832 eV~~~L~~ 839 (863)
++.++|..
T Consensus 198 el~~~l~~ 205 (211)
T 2gmw_A 198 DLPQAIKK 205 (211)
T ss_dssp GHHHHHHC
T ss_pred HHHHHHHh
Confidence 99887754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.91 E-value=7.5e-10 Score=113.26 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=61.0
Q ss_pred ecCC--CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc---------c
Q 002955 753 KPQG--VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---------S 821 (863)
Q Consensus 753 ~p~g--vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---------s 821 (863)
.+.+ .+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++++..|... .
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~l~~ 202 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTD 202 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-----------EEEEecCCccchhhhHHHhh
Confidence 4667 88999999999999 99999999999999999999999974 1333333221 1
Q ss_pred -ccceecCCHhHHHHHHHHHH
Q 002955 822 -KAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 822 -~A~y~l~d~~eV~~~L~~L~ 841 (863)
.|+|++++..++.+.|+.+.
T Consensus 203 ~~ad~v~~~~~el~~~l~~~~ 223 (229)
T 2fdr_A 203 AGAETVISRMQDLPAVIAAMA 223 (229)
T ss_dssp HTCSEEESCGGGHHHHHHHHT
T ss_pred cCCceeecCHHHHHHHHHHhh
Confidence 28999999999999988774
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.90 E-value=6.3e-11 Score=124.94 Aligned_cols=76 Identities=14% Similarity=0.221 Sum_probs=63.4
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----------
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----------- 819 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------- 819 (863)
..+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. +++|++|..
T Consensus 155 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~ 220 (267)
T 1swv_A 155 DVPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVEN 220 (267)
T ss_dssp GSSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhh
Confidence 3466788999999999999 9999 9999999999999999999973 356666653
Q ss_pred ------------------ccccceecCCHhHHHHHHHHHH
Q 002955 820 ------------------PSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 820 ------------------~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
...|+|++++..++.++|..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 260 (267)
T 1swv_A 221 MDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE 260 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHT
T ss_pred chhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHh
Confidence 1348999999999999887653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-09 Score=111.65 Aligned_cols=74 Identities=11% Similarity=0.003 Sum_probs=61.9
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc------cccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP------SKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~l 827 (863)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 45667889999999999 99999999999999999999999973 2445555421 3699999
Q ss_pred CCHhHHHHHHHHHH
Q 002955 828 DDTAEILRMLLGLA 841 (863)
Q Consensus 828 ~d~~eV~~~L~~L~ 841 (863)
++..++.++|++|+
T Consensus 229 ~s~~el~~~l~~li 242 (243)
T 3qxg_A 229 PSMQTLCDSWDTIM 242 (243)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhh
Confidence 99999999998873
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.89 E-value=9.5e-09 Score=108.40 Aligned_cols=205 Identities=11% Similarity=0.110 Sum_probs=113.2
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC-ce-------EEccCcEE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG-LG-------IAAEHGYF 662 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~-l~-------liaenGa~ 662 (863)
++|+|+||+||||++ ....+ +.+.++|+.+ ++.|+.++++|||+......+...+.. ++ +++.+|+.
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 478999999999998 44445 7888999998 778999999999998777666543211 22 33333322
Q ss_pred EEe-----CCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeee-ccceeEeecccCCCCcchhhHHHHHHHHHHHh
Q 002955 663 VRP-----NYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET-KESALVWNFQYADPDFGSCQAKELLDHLESVL 736 (863)
Q Consensus 663 I~~-----~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~-k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l 736 (863)
+.. .....+. . .. +.+...++.+ |..+.. ....+...+.. ......+.++++.|+
T Consensus 79 ~~~~~~~~~~~~~~~-~---g~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~~~---~~~~~~~~~~l~~l~--- 139 (264)
T 1yv9_A 79 IDYMKEANRGKKVFV-I---GE----AGLIDLILEA-----GFEWDETNPDYVVVGLDT---ELSYEKVVLATLAIQ--- 139 (264)
T ss_dssp HHHHHHHCCCSEEEE-E---SC----HHHHHHHHHT-----TCEECSSSCSEEEECCCT---TCCHHHHHHHHHHHH---
T ss_pred HHHHHhhCCCCEEEE-E---eC----HHHHHHHHHc-----CCcccCCCCCEEEEECCC---CcCHHHHHHHHHHHh---
Confidence 110 0000000 0 00 0111111111 111111 11111111111 112233455555553
Q ss_pred cCCCeEEEECCcEE----EEe-----------------cCCCCHH--HHHHHHHHHHhhcCCCcceEEEEeCC-cchHHH
Q 002955 737 ANEPVSVKSGPNIV----EVK-----------------PQGVNKG--LVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDM 792 (863)
Q Consensus 737 ~~~~~~v~~g~~~v----EI~-----------------p~gvsKG--~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~M 792 (863)
.+..+.+..+.... .+. +.+..|. .+++.+++++ |++++++++|||+ .||+.|
T Consensus 140 ~g~~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~ 216 (264)
T 1yv9_A 140 KGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL---GVEKEQVIMVGDNYETDIQS 216 (264)
T ss_dssp TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH---CSCGGGEEEEESCTTTHHHH
T ss_pred CCCEEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHH
Confidence 22223221222211 000 1234565 5899999999 9999999999999 699999
Q ss_pred HHHhhhhcCCCCCCCCcceEEEEeCCCc--------cccceecCCHhHH
Q 002955 793 FEVIKSAAAGPSLSPVAEVFACTVGQKP--------SKAKYYLDDTAEI 833 (863)
Q Consensus 793 f~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~d~~eV 833 (863)
.+.+|.. ++.|..|... ..|+|++++..++
T Consensus 217 a~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 217 GIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp HHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHcCCc-----------EEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 9999973 2445555321 1688888877654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.5e-09 Score=110.70 Aligned_cols=77 Identities=14% Similarity=0.044 Sum_probs=65.3
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 827 (863)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...|+|++
T Consensus 162 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEEE
Confidence 56677899999999999 99999999999999999999999973 245555542 14799999
Q ss_pred CCHhHHHHHHHHHHHhh
Q 002955 828 DDTAEILRMLLGLAEAS 844 (863)
Q Consensus 828 ~d~~eV~~~L~~L~~~~ 844 (863)
++.+++.++|+++....
T Consensus 228 ~~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 228 HSMPDFNKNWETLQSAL 244 (247)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999988754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=9e-09 Score=108.44 Aligned_cols=76 Identities=9% Similarity=0.010 Sum_probs=65.2
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------ 819 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------ 819 (863)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|++|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 566788999999999999 9999 9999999999999999999973 367777731
Q ss_pred -----------------ccccceecCCHhHHHHHHHHHHH
Q 002955 820 -----------------PSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 820 -----------------~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
...|+|++++..++.++|..+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24589999999999999988755
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.86 E-value=6.4e-11 Score=118.51 Aligned_cols=67 Identities=18% Similarity=0.112 Sum_probs=54.4
Q ss_pred CCCH--HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHH
Q 002955 756 GVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEI 833 (863)
Q Consensus 756 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV 833 (863)
+..| +.+++.+++++ |++++++++|||+.||++|++.+|.. ++++..|. + .|+|++++..++
T Consensus 137 ~~~Kp~~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-----------~i~~~~~~-~-~a~~v~~~~~el 200 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-----------SINFLEST-Y-EGNHRIQALADI 200 (207)
T ss_dssp CCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEESSCCS-C-TTEEECSSTTHH
T ss_pred CCCCCCcHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-----------EEEEecCC-C-CCCEEeCCHHHH
Confidence 3445 88999999999 99999999999999999999999974 12333344 3 789999999998
Q ss_pred HHHHH
Q 002955 834 LRMLL 838 (863)
Q Consensus 834 ~~~L~ 838 (863)
.++|+
T Consensus 201 ~~~l~ 205 (207)
T 2go7_A 201 SRIFE 205 (207)
T ss_dssp HHHTS
T ss_pred HHHHh
Confidence 87763
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-10 Score=119.32 Aligned_cols=70 Identities=13% Similarity=0.091 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~ 831 (863)
-.|+.+++.+++++ |++++++++|||+. ||++|++.+|..+ +.+..|.. +..|+|++++..
T Consensus 158 kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (235)
T 2om6_A 158 KPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMWA-----------VWINQEGDKVRKLEERGFEIPSIA 223 (235)
T ss_dssp TTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSEE-----------EEECTTCCSCEEEETTEEEESSGG
T ss_pred CCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCEE-----------EEECCCCCCcccCCCCcchHhhHH
Confidence 34789999999999 99999999999999 9999999999853 23333432 235788999999
Q ss_pred HHHHHHHHH
Q 002955 832 EILRMLLGL 840 (863)
Q Consensus 832 eV~~~L~~L 840 (863)
++.++|+.+
T Consensus 224 el~~~l~~~ 232 (235)
T 2om6_A 224 NLKDVIELI 232 (235)
T ss_dssp GHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999988765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.3e-09 Score=109.89 Aligned_cols=72 Identities=11% Similarity=0.023 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cccc-ceecCCH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKA-KYYLDDT 830 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A-~y~l~d~ 830 (863)
+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...| +|++++.
T Consensus 160 ~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~ 225 (240)
T 2no4_A 160 YKPDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSL 225 (240)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCH
Confidence 334788999999999 99999999999999999999999974 234555532 2457 8999999
Q ss_pred hHHHHHHHHHH
Q 002955 831 AEILRMLLGLA 841 (863)
Q Consensus 831 ~eV~~~L~~L~ 841 (863)
.++.++|.++.
T Consensus 226 ~el~~~l~~~~ 236 (240)
T 2no4_A 226 SELWPLLAKNV 236 (240)
T ss_dssp GGHHHHHCC--
T ss_pred HHHHHHHHHhh
Confidence 99998886654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.7e-09 Score=108.45 Aligned_cols=71 Identities=11% Similarity=0.092 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----------ccccce-
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----------PSKAKY- 825 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------~s~A~y- 825 (863)
.++.+++.+++++ |++++++++|||+. ||+.|++.+|... +.|..|.. ...|++
T Consensus 163 p~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T 2pke_A 163 KDPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGWG-----------IYTPYAVTWAHEQDHGVAADEPRLR 228 (251)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCEE-----------EECCCC-------------CCTTEE
T ss_pred CCHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCEE-----------EEECCCCccccccccccccCCCCee
Confidence 3689999999999 99999999999999 9999999999742 33333321 245787
Q ss_pred ecCCHhHHHHHHHHHHH
Q 002955 826 YLDDTAEILRMLLGLAE 842 (863)
Q Consensus 826 ~l~d~~eV~~~L~~L~~ 842 (863)
.+++..++.++|..+..
T Consensus 229 ~i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 229 EVPDPSGWPAAVRALDA 245 (251)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhCh
Confidence 89999999999988764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.4e-09 Score=111.46 Aligned_cols=74 Identities=11% Similarity=0.026 Sum_probs=61.5
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE----eCC-------C
Q 002955 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT----VGQ-------K 819 (863)
Q Consensus 751 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~ 819 (863)
|..+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+. .|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLKT-----------AFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCEE-----------EEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCeE-----------EEEecCCccCCCCCccccc
Confidence 45677888999999999999 999999999999999999999999853 2232 232 1
Q ss_pred ccccceecCCHhHHHHHHH
Q 002955 820 PSKAKYYLDDTAEILRMLL 838 (863)
Q Consensus 820 ~s~A~y~l~d~~eV~~~L~ 838 (863)
+..|+|++++..++.++|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4678999999999998875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.81 E-value=1e-09 Score=112.36 Aligned_cols=77 Identities=19% Similarity=0.103 Sum_probs=62.3
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C-----cccccee
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K-----PSKAKYY 826 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-----~s~A~y~ 826 (863)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|. . ...|+|+
T Consensus 143 ~~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v 208 (233)
T 3s6j_A 143 VSYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRV 208 (233)
T ss_dssp SSCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEE
T ss_pred CCCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEE
Confidence 345677899999999999 99999999999999999999999973 35566663 2 2349999
Q ss_pred cCCHhHHHHHHHHHHHh
Q 002955 827 LDDTAEILRMLLGLAEA 843 (863)
Q Consensus 827 l~d~~eV~~~L~~L~~~ 843 (863)
+++..++.++|++....
T Consensus 209 ~~~~~el~~~l~~~~~~ 225 (233)
T 3s6j_A 209 YEDPLDLLNHLDEIASR 225 (233)
T ss_dssp ESSHHHHHHTGGGTCC-
T ss_pred ECCHHHHHHHHHHHhhh
Confidence 99999999888765443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.80 E-value=6.3e-09 Score=105.67 Aligned_cols=64 Identities=11% Similarity=0.039 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-C----CccccceecCCHhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLDDTAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~----~~s~A~y~l~d~~e 832 (863)
.|+.+++++++++ |++++++++|||+.||++|++.+|..+ +.+..| + .+..|+|++++.++
T Consensus 151 p~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~~-----------~~~~~~~~~~~~~~~~a~~v~~~~~e 216 (226)
T 1te2_A 151 PHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMRS-----------IVVPAPEAQNDPRFVLANVKLSSLTE 216 (226)
T ss_dssp TSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCEE-----------EECCCTTTTTCGGGGGSSEECSCGGG
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCcccccccccCeEECCHHH
Confidence 4499999999999 999999999999999999999999742 223333 2 24678999999888
Q ss_pred HHH
Q 002955 833 ILR 835 (863)
Q Consensus 833 V~~ 835 (863)
+.+
T Consensus 217 l~~ 219 (226)
T 1te2_A 217 LTA 219 (226)
T ss_dssp CCH
T ss_pred HhH
Confidence 654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.79 E-value=5e-09 Score=109.83 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----------ccccc
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----------PSKAK 824 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------~s~A~ 824 (863)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 5556799999999999 99999999999999999999999974 244555522 24589
Q ss_pred eecCCHhHHHHHHHHHH
Q 002955 825 YYLDDTAEILRMLLGLA 841 (863)
Q Consensus 825 y~l~d~~eV~~~L~~L~ 841 (863)
|++++..++.++|....
T Consensus 232 ~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 232 RVLTSHAELRAALAEAG 248 (259)
T ss_dssp EEECSHHHHHHHHHHTT
T ss_pred hhhCCHHHHHHHHHhcc
Confidence 99999999999998743
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.78 E-value=3.3e-09 Score=107.62 Aligned_cols=67 Identities=7% Similarity=-0.019 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCCHhH--
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAE-- 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d~~e-- 832 (863)
.|+.+++.+++++ |++++++++|||+.||++|++.+|..+ .+++. -..|+|++++.++
T Consensus 146 p~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~~~--------------~~~~~~~~~~~a~~v~~~~~el~ 208 (221)
T 2wf7_A 146 PAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGALP--------------IGVGRPEDLGDDIVIVPDTSHYT 208 (221)
T ss_dssp TSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCEE--------------EEESCHHHHCSSSEEESSGGGCC
T ss_pred CChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCCEE--------------EEECCHHHhccccchhcCHHhCC
Confidence 3556999999999 999999999999999999999999742 22221 1279999987766
Q ss_pred HHHHHHHHH
Q 002955 833 ILRMLLGLA 841 (863)
Q Consensus 833 V~~~L~~L~ 841 (863)
|..+++.+.
T Consensus 209 ~~~~~~~~~ 217 (221)
T 2wf7_A 209 LEFLKEVWL 217 (221)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 455555554
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.77 E-value=4.5e-08 Score=97.94 Aligned_cols=60 Identities=12% Similarity=-0.006 Sum_probs=46.9
Q ss_pred hcccceeEecCCccccCCC---------------------CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC-hhhHHHH
Q 002955 589 RTKNRAILLDYDGTIMVPG---------------------SISTSPNAEAVAILDNLCRDPKNVVFLVSGKD-RDTLAEW 646 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~---------------------~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~-~~~l~~~ 646 (863)
.+++|+|+||+||||++.. .....+.+.+.++|++| ++.|+.++|+||++ ...+..+
T Consensus 24 ~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~G~~v~ivT~~~~~~~~~~~ 102 (187)
T 2wm8_A 24 ARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL-QSLGVPGAAASRTSEIEGANQL 102 (187)
T ss_dssp HTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHH-HHHTCCEEEEECCSCHHHHHHH
T ss_pred HhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHH-HHCCceEEEEeCCCChHHHHHH
Confidence 3457999999999999421 02235678899999998 77899999999999 6777777
Q ss_pred hhc
Q 002955 647 FSS 649 (863)
Q Consensus 647 ~~~ 649 (863)
+..
T Consensus 103 l~~ 105 (187)
T 2wm8_A 103 LEL 105 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=5.5e-09 Score=106.08 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=53.2
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---CccccceecCC
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---KPSKAKYYLDD 829 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~l~d 829 (863)
.+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+.. .+..|+|++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHIK--------------IAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSEE--------------EEESCCHHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCCe--------------EEECccHHHHHhcceeecc
Confidence 456788999999999999 99999999999999999999999974 33332 24779998853
Q ss_pred --HhHHHHH
Q 002955 830 --TAEILRM 836 (863)
Q Consensus 830 --~~eV~~~ 836 (863)
..+++.+
T Consensus 200 ~dl~~~~~~ 208 (217)
T 3m1y_A 200 PDLALIKPL 208 (217)
T ss_dssp SBGGGGTTC
T ss_pred cCHHHHHHH
Confidence 4455443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.7e-08 Score=107.38 Aligned_cols=73 Identities=8% Similarity=0.060 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceec
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 827 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 827 (863)
.+-.|+.+++.+++++ |+++ +++++|||+.||+.|++.+|...+ +.++-+.. ...|+|++
T Consensus 202 ~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~~~----------~~~~~~~~~~~~~~~~~ad~vi 268 (282)
T 3nuq_A 202 VCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMKTC----------IHLVENEVNEILGQTPEGAIVI 268 (282)
T ss_dssp CCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCSEE----------EEECSCCC----CCCCTTCEEE
T ss_pred CCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCeEE----------EEEcCCccccccccCCCCCEEe
Confidence 4456999999999999 9998 999999999999999999998421 22222221 34788999
Q ss_pred CCHhHHHHHHHHH
Q 002955 828 DDTAEILRMLLGL 840 (863)
Q Consensus 828 ~d~~eV~~~L~~L 840 (863)
++..++.++|..|
T Consensus 269 ~sl~el~~~l~~l 281 (282)
T 3nuq_A 269 SDILELPHVVSDL 281 (282)
T ss_dssp SSGGGGGGTSGGG
T ss_pred CCHHHHHHHhhhh
Confidence 9999988776543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.4e-09 Score=113.34 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=43.6
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+|+|+||+||||++ ....+ +.+.++|+++ ++.|+.|+++|||+......+...+
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~T~r~~~~~~~~~~~l 54 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFL-KERGIPFAFLTNNSTKTPEMYREKL 54 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 47999999999998 34444 6889999998 7789999999999987666655543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=103.47 Aligned_cols=74 Identities=7% Similarity=-0.059 Sum_probs=58.7
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-----CccccceecC
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-----KPSKAKYYLD 828 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-----~~s~A~y~l~ 828 (863)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+..|. .+..|+|+++
T Consensus 149 ~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 214 (230)
T 3um9_A 149 RLFKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYPV-----------CWINRSNGVFDQLGVVPDIVVS 214 (230)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCCE-----------EEECTTSCCCCCSSCCCSEEES
T ss_pred ccCCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCEE-----------EEEeCCCCccccccCCCcEEeC
Confidence 34556799999999999 999999999999999999999999742 2333332 2367899999
Q ss_pred CHhHHHHHHHHHH
Q 002955 829 DTAEILRMLLGLA 841 (863)
Q Consensus 829 d~~eV~~~L~~L~ 841 (863)
+..++.++|..+-
T Consensus 215 ~~~el~~~l~~~~ 227 (230)
T 3um9_A 215 DVGVLASRFSPVD 227 (230)
T ss_dssp SHHHHHHTCCC--
T ss_pred CHHHHHHHHHHhh
Confidence 9999998877653
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.4e-09 Score=112.94 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=59.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE----eCC-------Ccc
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT----VGQ-------KPS 821 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~~s 821 (863)
.+.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+. .|. ...
T Consensus 165 ~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~g~~~~~~~~~~~ 230 (254)
T 3umg_A 165 NRKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLAT-----------AFILRPVEHGPHQTDDLAPTG 230 (254)
T ss_dssp HTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCEE-----------EEECCTTTTCTTCCSCSSCSS
T ss_pred CCCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCEE-----------EEEecCCcCCCCccccccccC
Confidence 345666899999999999 999999999999999999999999853 2333 332 246
Q ss_pred ccceecCCHhHHHHHHHH
Q 002955 822 KAKYYLDDTAEILRMLLG 839 (863)
Q Consensus 822 ~A~y~l~d~~eV~~~L~~ 839 (863)
.|+|++++..++.++|..
T Consensus 231 ~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 231 SWDISATDITDLAAQLRA 248 (254)
T ss_dssp CCSEEESSHHHHHHHHHH
T ss_pred CCceEECCHHHHHHHhcC
Confidence 789999999999998865
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=102.94 Aligned_cols=73 Identities=23% Similarity=0.256 Sum_probs=61.0
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------cccc
Q 002955 751 EVKPQGVNKGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKA 823 (863)
Q Consensus 751 EI~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A 823 (863)
+..+.+..|+.+++.+++++ |++ ++++++|||+.||+.|++.+|.. ++.|.+|.. +..|
T Consensus 160 ~~~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~a 225 (240)
T 3sd7_A 160 NLDGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEP 225 (240)
T ss_dssp CTTSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCC
T ss_pred cccCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCC
Confidence 33456778999999999999 999 99999999999999999999973 355666653 2678
Q ss_pred ceecCCHhHHHHHH
Q 002955 824 KYYLDDTAEILRML 837 (863)
Q Consensus 824 ~y~l~d~~eV~~~L 837 (863)
+|++++.+++.++|
T Consensus 226 d~v~~~~~el~~~l 239 (240)
T 3sd7_A 226 TYIVENVESIKDIL 239 (240)
T ss_dssp SEEESSSTTHHHHH
T ss_pred CEEECCHHHHHHHh
Confidence 99999999988776
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.72 E-value=3.7e-09 Score=108.72 Aligned_cols=72 Identities=10% Similarity=-0.005 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcce-EEEEeCCC-----ccccceecCC
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEV-FACTVGQK-----PSKAKYYLDD 829 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~-----~s~A~y~l~d 829 (863)
+-.|..+++.+++++ |++++++++|||+.||+.|.+.+|.. + +.|..|.. ...++|++++
T Consensus 136 ~KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~~ 201 (218)
T 2o2x_A 136 RKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSE 201 (218)
T ss_dssp STTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEeccc
Confidence 334667899999999 99999999999999999999999973 2 33444431 2457788888
Q ss_pred HhHHHHHHHHHH
Q 002955 830 TAEILRMLLGLA 841 (863)
Q Consensus 830 ~~eV~~~L~~L~ 841 (863)
..++.++|..+.
T Consensus 202 l~el~~~l~~~~ 213 (218)
T 2o2x_A 202 LGDLLAAIETLG 213 (218)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 888888887653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.4e-09 Score=111.78 Aligned_cols=72 Identities=13% Similarity=0.005 Sum_probs=59.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcC-CCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKG-MLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~g-i~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l 827 (863)
..+..|+.+++.+++++ | ++++++++|||+. ||+.|++.+|.. ++.+..|. .+..|+|++
T Consensus 155 ~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v~ 220 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYEI 220 (238)
T ss_dssp TSCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeEE
Confidence 34566799999999999 9 9999999999997 999999999973 23444443 246799999
Q ss_pred CCHhHHHHHHHH
Q 002955 828 DDTAEILRMLLG 839 (863)
Q Consensus 828 ~d~~eV~~~L~~ 839 (863)
++.+++.++|.+
T Consensus 221 ~~~~el~~~l~~ 232 (238)
T 3ed5_A 221 RKLEELYHILNI 232 (238)
T ss_dssp SSGGGHHHHHTC
T ss_pred CCHHHHHHHHHh
Confidence 999999988865
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.6e-09 Score=107.99 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEE----EeCCC-----ccccceec
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFAC----TVGQK-----PSKAKYYL 827 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av----~vG~~-----~s~A~y~l 827 (863)
.|+.+++.+++++ |++++++++|||+. ||+.|++.+|... +.| ++|.. ...|+|++
T Consensus 158 pk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~~-----------v~v~~~~~~g~~~~~~~~~~~d~v~ 223 (234)
T 3ddh_A 158 KTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGYG-----------VHIPFEVMWKHEVTETFAHERLKQV 223 (234)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCEE-----------EECCCCTTCCCC---CCCCTTEEEC
T ss_pred CCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCeE-----------EEecCCcccccCCcccccCCCceec
Confidence 5999999999999 99999999999996 9999999999742 222 22332 23348899
Q ss_pred CCHhHHHHHH
Q 002955 828 DDTAEILRML 837 (863)
Q Consensus 828 ~d~~eV~~~L 837 (863)
++..++.++|
T Consensus 224 ~~l~el~~~l 233 (234)
T 3ddh_A 224 KRLDDLLSLL 233 (234)
T ss_dssp SSGGGHHHHC
T ss_pred ccHHHHHHhc
Confidence 9999988765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.2e-08 Score=100.54 Aligned_cols=69 Identities=9% Similarity=-0.027 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-CC----ccccceecCCHhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-QK----PSKAKYYLDDTAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~d~~e 832 (863)
.|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.|..| +. +..|+|++++..+
T Consensus 156 p~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~~-----------~~v~~~~~~~~~~~~~~~~v~~~~~e 221 (233)
T 3umb_A 156 TAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFTT-----------FWINRLGHPPEALDVAPAAAGHDMRD 221 (233)
T ss_dssp TSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCEE-----------EEECTTCCCCCSSSCCCSEEESSHHH
T ss_pred cCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCCchhccCCCCEEECCHHH
Confidence 3677899999999 999999999999999999999999742 223333 21 3569999999999
Q ss_pred HHHHHHHH
Q 002955 833 ILRMLLGL 840 (863)
Q Consensus 833 V~~~L~~L 840 (863)
+.++|++.
T Consensus 222 l~~~l~~~ 229 (233)
T 3umb_A 222 LLQFVQAR 229 (233)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99988764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.8e-09 Score=113.43 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=53.9
Q ss_pred cCCCCHHHHHHHHHHHHhhcCC-------CcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----cc
Q 002955 754 PQGVNKGLVAQHQLETMHQKGM-------LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PS 821 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi-------~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s 821 (863)
+.+..|+.+++.+++++ |+ +++++++|||+.||++|++.+|.. ++.|+.|.. +.
T Consensus 167 ~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~~ 232 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKEK 232 (275)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTTS
T ss_pred CCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhC
Confidence 55677899999999999 99 999999999999999999999974 245555542 34
Q ss_pred ccceecCCHhHH
Q 002955 822 KAKYYLDDTAEI 833 (863)
Q Consensus 822 ~A~y~l~d~~eV 833 (863)
.|+|++++.+++
T Consensus 233 ~ad~v~~~~~el 244 (275)
T 2qlt_A 233 GCDIIVKNHESI 244 (275)
T ss_dssp SCSEEESSGGGE
T ss_pred CCCEEECChHHc
Confidence 689998887764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-08 Score=101.52 Aligned_cols=68 Identities=16% Similarity=0.145 Sum_probs=54.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---CccccceecCCHh
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---KPSKAKYYLDDTA 831 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~l~d~~ 831 (863)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+..|. ....|+|++++..
T Consensus 143 ~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~a~~~~~~~~ 208 (214)
T 3e58_A 143 ESKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVEV-----------WAIRDNEFGMDQSAAKGLLDSLT 208 (214)
T ss_dssp SCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCEE-----------EEECCSSSCCCCTTSSEEESSGG
T ss_pred CCCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCEE-----------EEECCCCccchhccHHHHHHHHH
Confidence 3455789999999999 999999999999999999999999742 3333332 2377999999988
Q ss_pred HHHHH
Q 002955 832 EILRM 836 (863)
Q Consensus 832 eV~~~ 836 (863)
++.++
T Consensus 209 el~~~ 213 (214)
T 3e58_A 209 DVLDL 213 (214)
T ss_dssp GGGGG
T ss_pred HHHhh
Confidence 87654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-07 Score=94.77 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc--------cccceecC-
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP--------SKAKYYLD- 828 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~A~y~l~- 828 (863)
+....+.+++++ |++++++++|||+ .+|+.+.+.+|.. ++.|..|... ..++++++
T Consensus 99 ~p~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~v~~~ 164 (189)
T 3ib6_A 99 DKTIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGIH-----------AIWLQNPEVCLQDERLPLVAPPFVIPV 164 (189)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTCE-----------EEEECCTTTCBCSSCCCBCSSSCEEEE
T ss_pred CHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCCe-----------EEEECCccccccccccccCCCcceecc
Confidence 346778888888 9999999999999 7999999999973 2334333321 27788888
Q ss_pred -CHhHHHHHHHHHHHhhcCcc
Q 002955 829 -DTAEILRMLLGLAEASAQDA 848 (863)
Q Consensus 829 -d~~eV~~~L~~L~~~~~~~~ 848 (863)
+..++.++|+-+-..+++..
T Consensus 165 ~~l~~l~~~l~l~~~~~~~~~ 185 (189)
T 3ib6_A 165 WDLADVPEALLLLKKISEGHH 185 (189)
T ss_dssp SSGGGHHHHHHHHHHHC----
T ss_pred ccHHhHHHHHHHHHHhhcccc
Confidence 99999988876665555443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.64 E-value=3.1e-08 Score=100.70 Aligned_cols=70 Identities=23% Similarity=0.264 Sum_probs=58.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 827 (863)
+.+-.|..+.+.+++++ |++++++++|||+.||+.|.+.+|.. +++|++|.. ...|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 45667999999999999 99999999999999999999999973 356666643 13588999
Q ss_pred CCHhHHHHHH
Q 002955 828 DDTAEILRML 837 (863)
Q Consensus 828 ~d~~eV~~~L 837 (863)
++..++.++|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9999887654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.5e-08 Score=101.24 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=49.0
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecCCHhH
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDTAE 832 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~d~~e 832 (863)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|..+ +.+.. ....|+|++++.++
T Consensus 144 ~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~~-------------~~~~~~~~~~~ad~v~~s~~e 207 (233)
T 3nas_A 144 KGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMFA-------------VGVGQGQPMLGADLVVRQTSD 207 (233)
T ss_dssp -----CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCEE-------------EECC-------CSEECSSGGG
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCEE-------------EEECCccccccCCEEeCChHh
Confidence 4445677999999999 999999999999999999999999742 22221 22389999987655
Q ss_pred --HHHHHHHHHHh
Q 002955 833 --ILRMLLGLAEA 843 (863)
Q Consensus 833 --V~~~L~~L~~~ 843 (863)
+..+++.+...
T Consensus 208 l~~~~~~~~~~~~ 220 (233)
T 3nas_A 208 LTLELLHEEWEQY 220 (233)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 23444444433
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=7.2e-08 Score=101.95 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceec--CCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~ 831 (863)
+|+.+++.+.+.+ ++++|||+.||++|++.+|. +|++|+. +..|++.+ ++.+
T Consensus 194 ~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag~--------------~va~~~~~~~~~~~a~~~~~~~~~~ 251 (280)
T 3skx_A 194 EKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQADV--------------GIAIGAGTDVAVETADIVLVRNDPR 251 (280)
T ss_dssp GHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSSE--------------EEECSCCSSSCCCSSSEECSSCCTH
T ss_pred HHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCCc--------------eEEecCCcHHHHhhCCEEEeCCCHH
Confidence 6999988887642 68999999999999999985 5666652 46688887 8899
Q ss_pred HHHHHHHH
Q 002955 832 EILRMLLG 839 (863)
Q Consensus 832 eV~~~L~~ 839 (863)
+|.++|+.
T Consensus 252 ~l~~~l~~ 259 (280)
T 3skx_A 252 DVAAIVEL 259 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998874
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-08 Score=101.84 Aligned_cols=68 Identities=24% Similarity=0.250 Sum_probs=53.8
Q ss_pred CCCH--HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC
Q 002955 756 GVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD 829 (863)
Q Consensus 756 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d 829 (863)
+.+| +.+++.+++++ |++++++++|||+.||+.|++.+|..+ +.+..|.. -..|+|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVDF-----------GLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCEE-----------EEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCeE-----------EEEcCCCCChhhhccCCEEeCC
Confidence 6678 99999999999 999999999999999999999999742 23333431 1228899998
Q ss_pred HhHHHHHH
Q 002955 830 TAEILRML 837 (863)
Q Consensus 830 ~~eV~~~L 837 (863)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88876654
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.8e-08 Score=101.06 Aligned_cols=73 Identities=7% Similarity=0.000 Sum_probs=55.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-----CccccceecCC
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-----KPSKAKYYLDD 829 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-----~~s~A~y~l~d 829 (863)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+..|. .+..|+|++++
T Consensus 149 ~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
T 1zrn_A 149 VYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFPT-----------CWINRTGNVFEEMGQTPDWEVTS 214 (232)
T ss_dssp CCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCCE-----------EEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCCccccCCCCCEEECC
Confidence 4455788999999999 999999999999999999999999742 2333331 13568899999
Q ss_pred HhHHHHHHHHHH
Q 002955 830 TAEILRMLLGLA 841 (863)
Q Consensus 830 ~~eV~~~L~~L~ 841 (863)
..++.++|..+.
T Consensus 215 ~~el~~~l~~~~ 226 (232)
T 1zrn_A 215 LRAVVELFETAA 226 (232)
T ss_dssp HHHHHTTC----
T ss_pred HHHHHHHHHhhc
Confidence 999988776653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-07 Score=99.36 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=59.0
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe------------------
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV------------------ 816 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v------------------ 816 (863)
.+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|... +.+..
T Consensus 145 ~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~l~~g~~~~~ 210 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFSV-----------ARVARLSQEALARELVSGTIAPL 210 (253)
T ss_dssp CCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCEE-----------EEECCSCHHHHHHHTTSSSCCHH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCEE-----------EEECCcccchhhhhccccccccc
Confidence 3445788999999999 999999999999999999999999742 23333
Q ss_pred -----CC-----CccccceecCCHhHHHHHHHHHHHh
Q 002955 817 -----GQ-----KPSKAKYYLDDTAEILRMLLGLAEA 843 (863)
Q Consensus 817 -----G~-----~~s~A~y~l~d~~eV~~~L~~L~~~ 843 (863)
|. .+..|+|++++..++.++|.++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 211 TMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred ccccccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 11 1356899999999999999887544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.5e-07 Score=95.16 Aligned_cols=68 Identities=10% Similarity=-0.075 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------------------
Q 002955 761 LVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-------------------- 819 (863)
Q Consensus 761 ~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-------------------- 819 (863)
..+...++++ |+.+ +++++|||+.+|+.+-+.+|.. +++|..|..
T Consensus 91 ~~~~~a~~~l---~~~~~~~~v~VGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~~~ 156 (196)
T 2oda_A 91 DACWMALMAL---NVSQLEGCVLISGDPRLLQSGLNAGLW-----------TIGLASCGPLCGLSPSQWQALNNAEREQR 156 (196)
T ss_dssp HHHHHHHHHT---TCSCSTTCEEEESCHHHHHHHHHHTCE-----------EEEESSSSTTTCCCHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHc---CCCCCccEEEEeCCHHHHHHHHHCCCE-----------EEEEccCCccccccHHHhhhcchhhhhhh
Confidence 3555567777 8865 8999999999999999999973 356666642
Q ss_pred ---------ccccceecCCHhHHHHHHHHHHH
Q 002955 820 ---------PSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 820 ---------~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
...|+|++++..++.++|..+..
T Consensus 157 ~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~~ 188 (196)
T 2oda_A 157 RAQATLKLYSLGVHSVIDHLGELESCLADIAL 188 (196)
T ss_dssp HHHHHHHHHHTTCSEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEeCCHHHHHHHHHHHHH
Confidence 13588999999999998887654
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.59 E-value=4.4e-08 Score=93.51 Aligned_cols=60 Identities=27% Similarity=0.315 Sum_probs=46.1
Q ss_pred cccceeEecCCccccCCCC-CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHhhcc
Q 002955 590 TKNRAILLDYDGTIMVPGS-ISTSPNAEAVAILDNLCRDPKNVVFLVSGKD---RDTLAEWFSSC 650 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~-~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~---~~~l~~~~~~l 650 (863)
|++|+|++|+||||++... ....+.+.++++|++| ++.|+.|+|+|||+ ...+..|+...
T Consensus 1 m~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l-~~~G~~iii~TgR~~~~~~~~~~~l~~~ 64 (142)
T 2obb_A 1 SNAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRAR 64 (142)
T ss_dssp -CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred CCCeEEEEECcCCCCCCCCccccccCHHHHHHHHHH-HHCCCEEEEEeCCCcccHHHHHHHHHHc
Confidence 4578999999999998321 1123457899999998 88999999999998 55667777654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.57 E-value=7e-08 Score=100.16 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=59.3
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc------ccccee
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP------SKAKYY 826 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A~y~ 826 (863)
.+.+..|+.++..+++++ |++++++++|||+.||+.|.+.+|.. +++|+.|... ..|+|+
T Consensus 161 ~~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~ 226 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVI 226 (240)
T ss_dssp TSCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEE
Confidence 356677899999999999 99999999999999999999999973 3456666421 368899
Q ss_pred cCCHhHHHHHHH
Q 002955 827 LDDTAEILRMLL 838 (863)
Q Consensus 827 l~d~~eV~~~L~ 838 (863)
+++..++.++|.
T Consensus 227 ~~~~~el~~~l~ 238 (240)
T 2hi0_A 227 VDTAEKLEEAIL 238 (240)
T ss_dssp ECSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999887664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-08 Score=105.27 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=58.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCc--ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLP--DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l 827 (863)
..+-.|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|..|+ .+..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 34455788999999999 9988 9999999999999999999973 24555565 257899999
Q ss_pred CCHhHHHHHHHH
Q 002955 828 DDTAEILRMLLG 839 (863)
Q Consensus 828 ~d~~eV~~~L~~ 839 (863)
++.+++...|..
T Consensus 234 ~sl~el~~~l~~ 245 (250)
T 3l5k_A 234 NSLQDFQPELFG 245 (250)
T ss_dssp SCGGGCCGGGGT
T ss_pred cCHHHhhHHHhc
Confidence 999888766544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.5e-07 Score=103.18 Aligned_cols=71 Identities=14% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceec--CCHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYL--DDTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l--~d~~ 831 (863)
-.|+.+++++++++ |++++++++|||+.||++|++.+|.. +++... +..|++++ ++.+
T Consensus 244 kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~~--------------va~~~~~~~~~~a~~v~~~~~l~ 306 (335)
T 3n28_A 244 QTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGLG--------------VAYHAKPKVEAKAQTAVRFAGLG 306 (335)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EEESCCHHHHTTSSEEESSSCTH
T ss_pred hhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe--------------EEeCCCHHHHhhCCEEEecCCHH
Confidence 36999999999999 99999999999999999999999974 444322 46677775 5788
Q ss_pred HHHHHHHHHHHhh
Q 002955 832 EILRMLLGLAEAS 844 (863)
Q Consensus 832 eV~~~L~~L~~~~ 844 (863)
+|+.+|+......
T Consensus 307 ~v~~~L~~~l~~~ 319 (335)
T 3n28_A 307 GVVCILSAALVAQ 319 (335)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHh
Confidence 9999998876543
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-06 Score=98.42 Aligned_cols=244 Identities=11% Similarity=0.061 Sum_probs=141.8
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEecccCHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHTFDYAR 268 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dligF~t~~~~~ 268 (863)
++++..+| |+|.+|+.-...++ .+..+..++|++ ..+.+..+.+. ++.+++.+-+. -+|++-..|..+.+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs~~~----~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRCFDQ----RVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCCSCT----TSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCccccc----cCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 34466788 89999986555555 444444578874 44444433211 33445555543 37888778888888
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhC---CCeEEEeecCcc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK---GQIVMLGVDDMD 345 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~vil~Vdrld 345 (863)
+|++ .|+.. ++ +.+-| .+++|.-.+.. ......++++++. ++.+++..+|..
T Consensus 160 ~l~~-----~G~~~--~~----I~vtG--------np~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr~e 214 (385)
T 4hwg_A 160 YLIA-----EGLPA--EL----TFKSG--------SHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHREE 214 (385)
T ss_dssp HHHH-----TTCCG--GG----EEECC--------CSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECCC-
T ss_pred HHHH-----cCCCc--Cc----EEEEC--------CchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCCch
Confidence 8775 35421 11 11111 13455332210 0112234556652 455677778754
Q ss_pred ---cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH-hhccCCCCcccEEEEcCCCC
Q 002955 346 ---IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRI-NKIFGRPGYQPVVLIDTPLQ 421 (863)
Q Consensus 346 ---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I-N~~~g~~~~~pv~~~~~~v~ 421 (863)
..|++...++|+.++.+++ +++ +|... ++. +++.++ +. +- .+ ....| .+.++++
T Consensus 215 ~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~~~l~----~~~~~-~~--~~~~v-~l~~~lg 272 (385)
T 4hwg_A 215 NVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HPR---TKKRLE----DLEGF-KE--LGDKI-RFLPAFS 272 (385)
T ss_dssp ----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HHHHHH----TSGGG-GG--TGGGE-EECCCCC
T ss_pred hcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HHHHHH----HHHHH-hc--CCCCE-EEEcCCC
Confidence 4488999999999998766 543 43322 122 222222 21 10 11 12234 4566888
Q ss_pred HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC--CCceEeCCC
Q 002955 422 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL--SGAIRVNPW 498 (863)
Q Consensus 422 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l--~~al~VnP~ 498 (863)
..++..+|+.||+++..| |.+..||++++. |+|+. +.++..+.+ ..+++|.+
T Consensus 273 ~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~-------------------Pvv~~~~~ter~e~v~~G~~~lv~~- 327 (385)
T 4hwg_A 273 FTDYVKLQMNAFCILSDS-----GTITEEASILNL-------------------PALNIREAHERPEGMDAGTLIMSGF- 327 (385)
T ss_dssp HHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC-------------------CEEECSSSCSCTHHHHHTCCEECCS-
T ss_pred HHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC-------------------CEEEcCCCccchhhhhcCceEEcCC-
Confidence 999999999999999777 446799999943 34443 333333334 23566654
Q ss_pred CHHHHHHHHHHHhCCC
Q 002955 499 NIDAVAEAMDSALGVS 514 (863)
Q Consensus 499 d~~~~A~ai~~aL~m~ 514 (863)
|.+++++++.++|+.+
T Consensus 328 d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 328 KAERVLQAVKTITEEH 343 (385)
T ss_dssp SHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCh
Confidence 9999999999999865
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.51 E-value=2e-07 Score=95.33 Aligned_cols=74 Identities=9% Similarity=0.005 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC-----CccccceecCCHhHHH
Q 002955 761 LVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-----KPSKAKYYLDDTAEIL 834 (863)
Q Consensus 761 ~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-----~~s~A~y~l~d~~eV~ 834 (863)
.+++. ++++ |++++++++|||+. ||+.|.+.+|...++-+-.... ..+|+ ....|+|++++..++.
T Consensus 160 ~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~----~g~g~~~~~~~~~~ad~v~~~~~el~ 231 (240)
T 3smv_A 160 YMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGK----EGYGATHVPSRMPNVDFRFNSMGEMA 231 (240)
T ss_dssp HHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-----------CCCSSCCCCSEEESSHHHHH
T ss_pred HHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcc----cCCCCCCCCcCCCCCCEEeCCHHHHH
Confidence 45555 7888 99999999999995 9999999999853210000000 00121 2478999999999999
Q ss_pred HHHHHHHH
Q 002955 835 RMLLGLAE 842 (863)
Q Consensus 835 ~~L~~L~~ 842 (863)
++|+++..
T Consensus 232 ~~l~~~l~ 239 (240)
T 3smv_A 232 EAHKQALK 239 (240)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99987653
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=3.3e-08 Score=101.42 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=58.0
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---CccccceecCC
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---KPSKAKYYLDD 829 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~l~d 829 (863)
+.+..|+.+++.+++++ |++++++++|||+ .||+.|++.+|... +.+.-|. .+..|+|++++
T Consensus 159 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMHQ-----------AFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCEE-----------EEECCSCCCCCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCeE-----------EEEcCCCCCCcCCCCceEECC
Confidence 45667899999999999 9999999999999 59999999999842 2233332 24689999999
Q ss_pred HhHHHHHHHH
Q 002955 830 TAEILRMLLG 839 (863)
Q Consensus 830 ~~eV~~~L~~ 839 (863)
..|+.++++.
T Consensus 225 l~e~~~~~~~ 234 (240)
T 3qnm_A 225 LKELMNLLEG 234 (240)
T ss_dssp THHHHHHTC-
T ss_pred HHHHHHHHhc
Confidence 9999887754
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.5e-07 Score=96.48 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc---cccceecCCHhHH
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---SKAKYYLDDTAEI 833 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~A~y~l~d~~eV 833 (863)
-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|..|..+ ..|++++++..++
T Consensus 139 Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~el 204 (222)
T 2nyv_A 139 KPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSDL 204 (222)
T ss_dssp CCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTHH
T ss_pred CCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHHH
Confidence 36899999999999 99999999999999999999999973 2445555321 5688999999999
Q ss_pred HHHHHHHH
Q 002955 834 LRMLLGLA 841 (863)
Q Consensus 834 ~~~L~~L~ 841 (863)
.++|..+.
T Consensus 205 ~~~l~~~~ 212 (222)
T 2nyv_A 205 VKLMDNHI 212 (222)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHhh
Confidence 88876543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.46 E-value=8.1e-07 Score=91.20 Aligned_cols=40 Identities=18% Similarity=0.089 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHHHhhcC---CCcceEEEEeCCcchHHHHHHhhh
Q 002955 756 GVNKGLVAQHQLETMHQKG---MLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+..|...++.+++.+ | ++++++++|||+.||++|++.+|.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 345888888888888 8 899999999999999999999986
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.1e-08 Score=102.33 Aligned_cols=65 Identities=26% Similarity=0.333 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC------CccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ------KPSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~l~d~~e 832 (863)
|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|. ....|++++++..+
T Consensus 172 ~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~vi~~~~e 237 (243)
T 2hsz_A 172 HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFAD 237 (243)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGGG
T ss_pred CHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhhhCCCCEEECCHHH
Confidence 688999999999 99999999999999999999999974 24555552 13568899998888
Q ss_pred HHHHH
Q 002955 833 ILRML 837 (863)
Q Consensus 833 V~~~L 837 (863)
+.++|
T Consensus 238 l~~~l 242 (243)
T 2hsz_A 238 ILKIT 242 (243)
T ss_dssp GGGGT
T ss_pred HHHHh
Confidence 76544
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.2e-06 Score=96.32 Aligned_cols=246 Identities=10% Similarity=0.021 Sum_probs=144.4
Q ss_pred HHHhhcCCCCCEEEEeCcccc--hHH-HHHHhh-CCCCeEEEEEeCCCCChhHhhcCCC-hHHHHHHHHhCCEecccCHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLM--VLP-TFLRKR-FNRVKLGFFLHSPFPSSEIYRTLPI-RDELLRALLNADLIGFHTFD 265 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~--llp-~~lr~~-~~~~~i~~flH~PfP~~e~~r~lp~-r~eil~~ll~~dligF~t~~ 265 (863)
.+...+++ +|+|.+|=..+. ..+ .++++. ..++|+.+..|.=||-.-. .-+. ...-...+-.||.|..++..
T Consensus 67 ~~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~ 143 (339)
T 3rhz_A 67 GIVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQK 143 (339)
T ss_dssp HHTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHH
T ss_pred HHHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHH
Confidence 35555665 599999754432 222 233331 1289999999987763210 0001 11112234568999999987
Q ss_pred HHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEecccc-CchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCc
Q 002955 266 YARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM 344 (863)
Q Consensus 266 ~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 344 (863)
..+.+.+ .|+.. .++ .+.++ |.. . ..+. ....++++|+++||+
T Consensus 144 ~~~~l~~-----~G~~~---------------~ki--~~~~~~~~~--~---~~~~---------~~~~~~~~i~yaG~l 187 (339)
T 3rhz_A 144 MIDKLRD-----FGMNV---------------SKT--VVQGMWDHP--T---QAPM---------FPAGLKREIHFPGNP 187 (339)
T ss_dssp HHHHHHH-----TTCCC---------------SEE--EECCSCCCC--C---CCCC---------CCCEEEEEEEECSCT
T ss_pred HHHHHHH-----cCCCc---------------Cce--eecCCCCcc--C---cccc---------cccCCCcEEEEeCCc
Confidence 7666554 14321 111 12222 110 0 0000 011346789999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002955 345 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 424 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~e 424 (863)
....++.. + .|+++ |+.+|... +. +. . .| .+.|.+|.+|
T Consensus 188 ~k~~~L~~-------l---~~~~~----f~ivG~G~-----~~----------------~l---~--nV-~f~G~~~~~e 226 (339)
T 3rhz_A 188 ERFSFVKE-------W---KYDIP----LKVYTWQN-----VE----------------LP---Q--NV-HKINYRPDEQ 226 (339)
T ss_dssp TTCGGGGG-------C---CCSSC----EEEEESCC-----CC----------------CC---T--TE-EEEECCCHHH
T ss_pred chhhHHHh-------C---CCCCe----EEEEeCCc-----cc----------------Cc---C--CE-EEeCCCCHHH
Confidence 85332211 1 46666 99888533 21 01 1 24 4567999999
Q ss_pred HHHHHHhccceeecccccC---------CCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCc
Q 002955 425 RIAYYVIAECCLVTAVRDG---------MNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGA 492 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EG---------mnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~a 492 (863)
+..+|+.||+.++. .++ ++....||||| |.|+|++..++..+.+ ..|
T Consensus 227 l~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~-------------------G~PVI~~~~~~~~~~v~~~~~G 285 (339)
T 3rhz_A 227 LLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA-------------------GIPVIVQEGIANQELIENNGLG 285 (339)
T ss_dssp HHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH-------------------TCCEEEETTCTTTHHHHHHTCE
T ss_pred HHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc-------------------CCCEEEccChhHHHHHHhCCeE
Confidence 99999999998887 233 46678999999 5678999988888777 237
Q ss_pred eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 493 IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 493 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+.++ +.++++++|..+ .+++++.+.+..+++.......+..++-+
T Consensus 286 ~~~~--~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~~~~~~f~k~~l 330 (339)
T 3rhz_A 286 WIVK--DVEEAIMKVKNV---NEDEYIELVKNVRSFNPILRKGFFTRRLL 330 (339)
T ss_dssp EEES--SHHHHHHHHHHC---CHHHHHHHHHHHHHHTHHHHTTHHHHHHH
T ss_pred EEeC--CHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 8886 588888888863 45666665555655544433344444333
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.3e-07 Score=93.13 Aligned_cols=66 Identities=12% Similarity=0.066 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~d~~eV 833 (863)
|+.+++.+++++ | ++++++|||+.||+.|.+.+|.. ++.+..|. . ...|++++++..++
T Consensus 130 ~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~el 193 (201)
T 2w43_A 130 SPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKEL 193 (201)
T ss_dssp CHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred CHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHHH
Confidence 499999999999 8 89999999999999999999974 23344432 1 24688999999999
Q ss_pred HHHHHHH
Q 002955 834 LRMLLGL 840 (863)
Q Consensus 834 ~~~L~~L 840 (863)
.++|..+
T Consensus 194 ~~~l~~~ 200 (201)
T 2w43_A 194 YEWILRY 200 (201)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9888764
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.31 E-value=5e-06 Score=88.59 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=45.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhhcc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSC 650 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~l 650 (863)
++|+|+||+||||++ .. .+.+.+.++|+++ ++.|+.|+++|| |+...+.+.+..+
T Consensus 13 ~~k~i~~D~DGtL~~---~~-~~~~~~~~~l~~l-~~~g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT---YN-GLLPGIENTFDYL-KAQGQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GCSEEEECSBTTTEE---TT-EECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEcCcCCcCc---CC-eeChhHHHHHHHH-HHCCCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 579999999999998 33 3557889999998 788999999995 7887777777554
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.8e-08 Score=103.84 Aligned_cols=76 Identities=18% Similarity=0.099 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-------cccceec
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYL 827 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l 827 (863)
+-.|..+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.+..|... ..|+|++
T Consensus 160 ~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v~ 225 (263)
T 3k1z_A 160 PKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHIL 225 (263)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGEE
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceEe
Confidence 444678899999999 99999999999996 999999999974 2344444322 2699999
Q ss_pred CCHhHHHHHHHHHHHhhc
Q 002955 828 DDTAEILRMLLGLAEASA 845 (863)
Q Consensus 828 ~d~~eV~~~L~~L~~~~~ 845 (863)
++..++.++|+.+...+.
T Consensus 226 ~~l~el~~~l~~~~~~~~ 243 (263)
T 3k1z_A 226 PSLAHLLPALDCLEGSAE 243 (263)
T ss_dssp SSGGGHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 999999999999876543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.27 E-value=4.5e-07 Score=84.79 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=42.7
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
+|+|++|+||||.. ...+.+.+.++|++| ++.|+.++|+|+++...+...+.
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L-~~~G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAA-KKNGVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHH-HHTTCEEEEEECSCCGGGGHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 58999999999944 445678899999998 77899999999998777655553
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.5e-07 Score=97.60 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecC--CHhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--d~~e 832 (863)
.|..+++.+++++ |++++++++|||+.||+.|++.+|. ++.++.. ...|++.++ +..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG~--------------~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAGT--------------GIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 4888999999999 9999999999999999999999986 4555543 255666653 6666
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
++++|+
T Consensus 309 ll~~L~ 314 (317)
T 4eze_A 309 LLFLIE 314 (317)
T ss_dssp GGGGTC
T ss_pred HHHHHH
Confidence 666553
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.25 E-value=2.4e-06 Score=91.57 Aligned_cols=140 Identities=14% Similarity=0.196 Sum_probs=99.8
Q ss_pred HHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCc
Q 002955 581 DHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660 (863)
Q Consensus 581 ~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenG 660 (863)
+.....|.....+++++|+|+++...-.....+.+.+.++|+.| ++.|+.++|+||++...+..++..+ ++.
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~l~~~---gl~---- 203 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD---- 203 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS----
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHh---CCc----
Confidence 45556677666789999999998742112345678899999998 7789999999999998888877543 210
Q ss_pred EEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCC
Q 002955 661 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP 740 (863)
Q Consensus 661 a~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~ 740 (863)
.+ |..
T Consensus 204 ---------------------------------------~~-----------f~~------------------------- 208 (287)
T 3a1c_A 204 ---------------------------------------LV-----------IAE------------------------- 208 (287)
T ss_dssp ---------------------------------------EE-----------ECS-------------------------
T ss_pred ---------------------------------------ee-----------eee-------------------------
Confidence 00 000
Q ss_pred eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-
Q 002955 741 VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK- 819 (863)
Q Consensus 741 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 819 (863)
+.| .+|..+++ .+ +.. +++++|||+.||+.|++.+|. +|++|+.
T Consensus 209 -----------i~~--~~K~~~~~----~l---~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~~ 253 (287)
T 3a1c_A 209 -----------VLP--HQKSEEVK----KL---QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSGS 253 (287)
T ss_dssp -----------CCT--TCHHHHHH----HH---TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCCS
T ss_pred -----------cCh--HHHHHHHH----HH---hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCCC
Confidence 002 25755544 45 667 999999999999999999986 3455542
Q ss_pred ---ccccceec--CCHhHHHHHHH
Q 002955 820 ---PSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 820 ---~s~A~y~l--~d~~eV~~~L~ 838 (863)
...|++++ ++..++.++|+
T Consensus 254 ~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 254 DVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp CCSSCCSSEEESSSCTHHHHHHHH
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHH
Confidence 35689999 88899887765
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.2e-06 Score=96.92 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecC--CHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--d~~ 831 (863)
-.|..+++.+++++ |++++++++|||+.||++|++.+|. +++++.+ +..|++.++ +.+
T Consensus 322 kpk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG~--------------~va~~~~~~~~~~ad~~i~~~~l~ 384 (415)
T 3p96_A 322 AGKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAGL--------------GIAFNAKPALREVADASLSHPYLD 384 (415)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCSEEECSSCTT
T ss_pred cchHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCCC--------------eEEECCCHHHHHhCCEEEccCCHH
Confidence 34899999999999 9999999999999999999999986 3445443 367888865 667
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
+++.+|.
T Consensus 385 ~ll~~l~ 391 (415)
T 3p96_A 385 TVLFLLG 391 (415)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 8877664
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.9e-06 Score=102.87 Aligned_cols=138 Identities=16% Similarity=0.217 Sum_probs=101.9
Q ss_pred HHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 583 IVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 583 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
..+.+.....+.+++..||+++..-.....+.+++.++|++| ++.|+.++++||++......+...+ ++.
T Consensus 428 ~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~------ 497 (645)
T 3j08_A 428 ALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD------ 497 (645)
T ss_dssp HHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS------
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHc---CCC------
Confidence 344455566788999999998742113456788999999998 8889999999999999988887643 220
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---- 818 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---- 818 (863)
..+.++.|. +|+.+++.+.+ . +.|+++||+.||.+|++.++. ++++|+
T Consensus 498 ----~~~~~~~P~--~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~~ 549 (645)
T 3j08_A 498 ----LVIAEVLPH--QKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQADL--------------GIAVGSGSDV 549 (645)
T ss_dssp ----EEECSCCTT--CHHHHHHHHTT-----T---CCEEEEECSSSCHHHHHHSSE--------------EEEECCCSCC
T ss_pred ----EEEEeCCHH--hHHHHHHHHhh-----C---CeEEEEeCCHhHHHHHHhCCE--------------EEEeCCCcHH
Confidence 001112232 79998888753 2 789999999999999999985 566665
Q ss_pred Cccccceec--CCHhHHHHHHH
Q 002955 819 KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 819 ~~s~A~y~l--~d~~eV~~~L~ 838 (863)
.+..|++++ ++.+++.++++
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHHH
T ss_pred HHHhCCEEEecCCHHHHHHHHH
Confidence 357889988 67888887775
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-06 Score=81.92 Aligned_cols=47 Identities=17% Similarity=0.350 Sum_probs=40.5
Q ss_pred cceeEecCCccccCCCCCCC------CCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 592 NRAILLDYDGTIMVPGSIST------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
+|+|++|+||||++. .. .+++.+.++|++| +++|+.++++|||+...
T Consensus 1 ik~i~~DlDGTL~~~---~~~~~~~~~~~~~~~~~l~~l-~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQA---NTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCC---CCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCC---CCCccccCCCCHHHHHHHHHH-HhCCCeEEEEeCCChhh
Confidence 479999999999983 33 5779999999998 77899999999998754
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.2e-06 Score=89.67 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecCCHhHH-HH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDTAEI-LR 835 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~d~~eV-~~ 835 (863)
+......+++++ |++|+++++|||+.+|+.+.+.+|. .+|.|+. ..+.|+|++++..++ .+
T Consensus 172 ~p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~ad~vi~~l~eL~~~ 235 (250)
T 4gib_A 172 HPEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVGVGNYENLKKANLVVDSTNQLKFE 235 (250)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEEESCTTTTTTSSEEESSGGGCCHH
T ss_pred cHHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEEECChhHhccCCEEECChHhCCHH
Confidence 356888899999 9999999999999999999999986 2566665 346799999998887 56
Q ss_pred HHHHHHH
Q 002955 836 MLLGLAE 842 (863)
Q Consensus 836 ~L~~L~~ 842 (863)
.|+++.+
T Consensus 236 ~i~~~~n 242 (250)
T 4gib_A 236 YIQEKYN 242 (250)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.9e-06 Score=85.14 Aligned_cols=41 Identities=15% Similarity=-0.074 Sum_probs=36.4
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|..
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~~ 174 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGLD 174 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTCE
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCCe
Confidence 34556899999999999 987 999999999999999999973
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.12 E-value=2.6e-06 Score=87.02 Aligned_cols=62 Identities=26% Similarity=0.363 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
.|..+++++++++ |+ +++++|||+.||+.|.+.+|. +|.+|.. ...|++++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag~--------------~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCCe--------------EEEecCccccHHHHhcCCeeecCHH
Confidence 5888999999988 87 789999999999999988874 4556642 145788899888
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
++.++|.
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8776653
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.3e-06 Score=101.05 Aligned_cols=139 Identities=16% Similarity=0.203 Sum_probs=102.0
Q ss_pred HHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcE
Q 002955 582 HIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 582 ~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa 661 (863)
...+.+.....+.+++..||+++..-.....+.+++.+++++| ++.|+.++++||+.......+...+ ++.
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l-~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~----- 575 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD----- 575 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc---CCc-----
Confidence 3344555566789999999998752113456788999999998 8889999999999999988887543 220
Q ss_pred EEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCe
Q 002955 662 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPV 741 (863)
Q Consensus 662 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~ 741 (863)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--- 818 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--- 818 (863)
..+.++.| .+|+.+++.+.+ . +.|+++||+.||.+|++.++. ++++|+
T Consensus 576 -----~~~~~~~P--~~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~ 626 (723)
T 3j09_A 576 -----LVIAEVLP--HQKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQADL--------------GIAVGSGSD 626 (723)
T ss_dssp -----EEECSCCT--TCHHHHHHHHTT-----T---CCEEEEECSSTTHHHHHHSSE--------------EEECCCCSC
T ss_pred -----EEEccCCH--HHHHHHHHHHhc-----C---CeEEEEECChhhHHHHhhCCE--------------EEEeCCCcH
Confidence 00111123 269988888753 2 789999999999999999985 566664
Q ss_pred -Cccccceec--CCHhHHHHHHH
Q 002955 819 -KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 819 -~~s~A~y~l--~d~~eV~~~L~ 838 (863)
.+..|++++ ++.+++.++++
T Consensus 627 ~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 627 VAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHhCCEEEeCCCHHHHHHHHH
Confidence 357889988 67888887776
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.1e-05 Score=80.94 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=48.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---cc-cccee-c
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PS-KAKYY-L 827 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s-~A~y~-l 827 (863)
+|+...|..+++.+ +..++++++|||+.||+.|++.+|.. +.++.. .. .+.+. +
T Consensus 128 ~p~p~~~~~~l~~l-------~~~~~~~~~iGD~~~Di~~a~~aG~~--------------~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIAF-------KSLYYRVIAAGDSYNDTTMLSEAHAG--------------ILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHHH-------HHTTCEEEEEECSSTTHHHHHHSSEE--------------EEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHHH-------HhcCCEEEEEeCChhhHHHHHhcCcc--------------EEECCcHHHHHHHhhhccc
Confidence 47666677766655 44578999999999999999999863 334332 12 23443 7
Q ss_pred CCHhHHHHHHHHHH
Q 002955 828 DDTAEILRMLLGLA 841 (863)
Q Consensus 828 ~d~~eV~~~L~~L~ 841 (863)
++..++.++|+++.
T Consensus 187 ~~~~~l~~~l~~~~ 200 (206)
T 1rku_A 187 HTYEDLKREFLKAS 200 (206)
T ss_dssp CSHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHh
Confidence 89999999887764
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=6.2e-06 Score=99.43 Aligned_cols=139 Identities=14% Similarity=0.186 Sum_probs=99.7
Q ss_pred HHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 583 IVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 583 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
..+.+.....+.+++.+||+++..-.....+.+++.++|++| ++.|+.++++|||.......+...+ ++..
T Consensus 525 ~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L-~~~Gi~v~mlTGd~~~~a~~ia~~l---gi~~----- 595 (736)
T 3rfu_A 525 KADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILEL-QQSGIEIVMLTGDSKRTAEAVAGTL---GIKK----- 595 (736)
T ss_dssp HHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHHHH---TCCC-----
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCCE-----
Confidence 345566666899999999998742112345778889999998 8889999999999999998887644 2200
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
.+.++.|. +|...++.+.++ .+.|+++||+.||.+||+.++. ++++|+.
T Consensus 596 -----v~a~~~P~--~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Adv--------------GIAmg~g~d~ 647 (736)
T 3rfu_A 596 -----VVAEIMPE--DKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKADI--------------GIAMGTGTDV 647 (736)
T ss_dssp -----EECSCCHH--HHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSSE--------------EEEESSSCSH
T ss_pred -----EEEecCHH--HHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCCE--------------EEEeCCccHH
Confidence 00111121 377777777654 2569999999999999999985 6777763
Q ss_pred -ccccceec--CCHhHHHHHHH
Q 002955 820 -PSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 820 -~s~A~y~l--~d~~eV~~~L~ 838 (863)
+..|++++ +|.+++.+.++
T Consensus 648 a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 648 AIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHhCCEEEccCCHHHHHHHHH
Confidence 47788987 56677776655
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.93 E-value=4e-05 Score=96.30 Aligned_cols=165 Identities=21% Similarity=0.222 Sum_probs=92.9
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHH
Q 002955 609 ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEP 688 (863)
Q Consensus 609 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~ 688 (863)
...++.+++.++++++ ++.|+.|+++|||.......+... +++..+++..+ .+....
T Consensus 601 i~Dp~r~~~~~aI~~l-~~aGI~vvmiTGd~~~tA~~ia~~---lgi~~~~~~~i-------------------~~~~~~ 657 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKC-RTAGIRVIMVTGDHPITAKAIAAS---VGIISEGSETV-------------------EDIAAR 657 (1034)
T ss_pred ccCCCchhHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHH---cCCCCCCchHH-------------------HHHHHh
Confidence 3456889999999997 999999999999999999988854 44433222100 010100
Q ss_pred HHHHHhhcCCCceeee-ccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHH
Q 002955 689 VMKLYTETTDGSTIET-KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL 767 (863)
Q Consensus 689 i~~~y~~~~~gs~ie~-k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll 767 (863)
.. .+...... ........-.. +.....++ +.+.+......+ +..+.|. .|...++.+.
T Consensus 658 ----~~--~~~~~~~~~~~~~~~~~g~~----l~~~~~~~----l~~~~~~~~~~v-----~ar~~P~--~K~~iv~~lq 716 (1034)
T 3ixz_A 658 ----LR--VPVDQVNRKDARACVINGMQ----LKDMDPSE----LVEALRTHPEMV-----FARTSPQ--QKLVIVESCQ 716 (1034)
T ss_pred ----hC--ccchhccccccceeEEecHh----hhhCCHHH----HHHHHHhCCceE-----EEecCHH--HHHHHHHHHH
Confidence 00 00000000 00001111000 00001111 222222222111 3344443 5887777765
Q ss_pred HHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-C----CccccceecC--CHhHHHHHHH
Q 002955 768 ETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLD--DTAEILRMLL 838 (863)
Q Consensus 768 ~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~----~~s~A~y~l~--d~~eV~~~L~ 838 (863)
+. | ..|+++||+.||.+||+.|+. +|++| + .+..|+|++. +.+++...++
T Consensus 717 ~~----g---~~V~a~GDG~ND~~mLk~A~v--------------GIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 717 RL----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred Hc----C---CEEEEECCcHHhHHHHHHCCe--------------eEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 43 3 469999999999999999986 56676 4 3678999874 5677777774
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.93 E-value=9.3e-06 Score=81.01 Aligned_cols=37 Identities=8% Similarity=0.080 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+...++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 143 NPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 467889999999 9999999999999999999999986
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=5.3e-05 Score=84.67 Aligned_cols=156 Identities=10% Similarity=0.029 Sum_probs=95.0
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
.+.+++++|++. .|+......+++.+ ++. +++ ++.++.+. .+.++++. ..+-
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~----~~~~~l~~-----------------~~~~ 293 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPS----LDVSGLGE-----------------VPAN 293 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSS----CCCTTCCC-----------------CCTT
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCC----CChhhhcc-----------------CCCc
Confidence 456889999996 66666666666555 333 222 44444322 10111110 0112
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec----ccccCcccC
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS----EFVGCSPSL 489 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS----e~~G~~~~l 489 (863)
+.+.+.++ +..+|+.||+||.+| |. .+.+|||+| +.|+|+. +..+.++.+
T Consensus 294 v~~~~~~~---~~~~l~~ad~~v~~~---g~-~t~~Ea~a~-------------------G~P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 294 VRLESWVP---QAALLPHVDLVVHHG---GS-GTTLGALGA-------------------GVPQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp EEEESCCC---HHHHGGGCSEEEESC---CH-HHHHHHHHH-------------------TCCEEECCCSTTHHHHHHHH
T ss_pred EEEeCCCC---HHHHHhcCcEEEECC---ch-HHHHHHHHh-------------------CCCEEecCCchhHHHHHHHH
Confidence 34456664 778899999999765 32 588999999 4557774 333455555
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 490 ---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 490 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
..|++++|. |.++++++|.++|+.+ +.++...+..+++...++....++.+.+-
T Consensus 348 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 348 AQAGAGDHLLPDNISPDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGF 406 (412)
T ss_dssp HHHTSEEECCGGGCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 347888887 8999999999999864 33333344455556667766666655443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.81 E-value=2.5e-06 Score=85.46 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
..+++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 151 ~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 151 ARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 45888999999 9999999999999999999999986
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.80 E-value=8.9e-06 Score=82.33 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-----cccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-----SKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~A~y~l~d~~eV 833 (863)
+....+.+++++ |++|+++++|||+.+|+.+.+.+|.. .+++++.|... ....+.+.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 467888999999 99999999999999999999999973 23567777432 2223445578899
Q ss_pred HHHHHHH
Q 002955 834 LRMLLGL 840 (863)
Q Consensus 834 ~~~L~~L 840 (863)
++.|+.|
T Consensus 209 i~~l~eL 215 (216)
T 3kbb_A 209 LNVLKEV 215 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988876
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=6.8e-05 Score=89.26 Aligned_cols=150 Identities=13% Similarity=0.073 Sum_probs=102.3
Q ss_pred CCCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCC
Q 002955 333 KGQIVMLGVDDMDIFKGISL-KLLAMEQLLS--QNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 408 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~ 408 (863)
++..+++.|.|+...||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++.||..=.-.
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 35688999999999999999 8888888765 466522 247777766443222 222345566777888888632222
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccceeeccc--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 409 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 409 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
+.-.|+++. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |+|-+|..-|+-
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 661 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN--------------------GALTVGTLDGAN 661 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeeecCcCCee
Confidence 333466665 4566666689999999999999 88888888777773 555666666655
Q ss_pred ccC------CCceEeCCCCHHHHHH
Q 002955 487 PSL------SGAIRVNPWNIDAVAE 505 (863)
Q Consensus 487 ~~l------~~al~VnP~d~~~~A~ 505 (863)
.++ .+++++-. +.+++.+
T Consensus 662 vEi~e~vG~~NgF~FG~-~~~ev~~ 685 (796)
T 1l5w_A 662 VEIAEKVGEENIFIFGH-TVEQVKA 685 (796)
T ss_dssp HHHHHHHCGGGSEECSC-CHHHHHH
T ss_pred eehhhccCCCcEEEecC-CHHHHHH
Confidence 444 24778766 6666653
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.70 E-value=3.7e-05 Score=91.54 Aligned_cols=151 Identities=9% Similarity=0.110 Sum_probs=102.9
Q ss_pred CCCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCC
Q 002955 333 KGQIVMLGVDDMDIFKGISL-KLLAMEQLLS--QNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 408 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~ 408 (863)
++..+++.|.|+...||..+ .+..++++++ ++|+.. ..+++|..|....+. .....+-+.+.++++.||..=.-.
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 35689999999999999999 8999998875 566522 247777666443222 222345566778888888743233
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccceeeccc--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 409 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 409 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
+.-.|+++. ..+..--..+|.+||+++.||. .|.-|+.-+-+|.- |+|-+|..-|+-
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 651 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN--------------------GALTLGTMDGAN 651 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT--------------------TCEEEEESSTHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeEEeccCCeE
Confidence 444577766 4566666689999999999999 88888888777763 555556666654
Q ss_pred ccC------CCceEeCC--CCHHHHHH
Q 002955 487 PSL------SGAIRVNP--WNIDAVAE 505 (863)
Q Consensus 487 ~~l------~~al~VnP--~d~~~~A~ 505 (863)
.++ .+++++-. .++.++-.
T Consensus 652 vEi~e~vG~~NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 652 VEIVDSVGEENAYIFGARVEELPALRE 678 (796)
T ss_dssp HHHHHHHCGGGSEEESCCTTTHHHHHH
T ss_pred eehhhhcCCCcEEEecCchhhHHHHHH
Confidence 443 24677765 55655543
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.68 E-value=5.3e-05 Score=78.66 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAE 832 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~e 832 (863)
.......++++ |++|++|++|||+.+|+.+-+.+|. .+|.|+...+.|+..+++..+
T Consensus 152 p~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~-------------~~I~V~~g~~~ad~~~~~~~~ 208 (243)
T 4g9b_A 152 PEIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGM-------------RSVGIGAGLTGAQLLLPSTES 208 (243)
T ss_dssp THHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESTTCCSCSEEESSGGG
T ss_pred HHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCCCCcHHHhcCChhh
Confidence 56788889999 9999999999999999999999997 356666666778887766443
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.66 E-value=4.3e-05 Score=91.22 Aligned_cols=151 Identities=10% Similarity=0.071 Sum_probs=101.6
Q ss_pred CCCeEEEeecCcccccCHHHH-HHHHHHHH--HhCCCCCC-ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCC
Q 002955 333 KGQIVMLGVDDMDIFKGISLK-LLAMEQLL--SQNPSKRG-KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 408 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~-l~A~~~ll--~~~p~~~~-~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~ 408 (863)
++..++..|.|+...||..+. |..+++++ ..+|+..= .+++|..|....+. ....++-+.+.++++.+|..=...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 356899999999999999998 88888886 35665321 35677666443222 222345556777888887543333
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccceeeccc--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 409 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 409 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
++-.|+++. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |+|-+|..-|+.
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN--------------------GaLtigtlDGan 685 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN--------------------GALTIGTMDGAN 685 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CceEEEEecCcc
Confidence 333577765 4556666689999999999999 88888888777763 556666665655
Q ss_pred ccC------CCceEeCCCCHHHHHHHH
Q 002955 487 PSL------SGAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 487 ~~l------~~al~VnP~d~~~~A~ai 507 (863)
.++ .+++++... .+++ +++
T Consensus 686 vEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 686 VEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred chhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 332 237777665 6666 444
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00011 Score=72.76 Aligned_cols=66 Identities=24% Similarity=0.400 Sum_probs=55.2
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHh
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~ 831 (863)
..|...+|+.+++.+ +++++++|||+.||++|++.+|. +|.+++....|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag~--------------~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERADM--------------GIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCSE--------------EEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCCc--------------eEEECCCCccccEEEccHH
Confidence 455667899988876 47899999999999999999986 4667765449999999999
Q ss_pred HHHHHHHHH
Q 002955 832 EILRMLLGL 840 (863)
Q Consensus 832 eV~~~L~~L 840 (863)
++.++|+++
T Consensus 191 el~~~l~~l 199 (201)
T 4ap9_A 191 ELVDFIKNL 199 (201)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00057 Score=75.24 Aligned_cols=52 Identities=25% Similarity=0.277 Sum_probs=40.0
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHh
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD---RDTLAEWF 647 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~---~~~l~~~~ 647 (863)
+.+.++||+||||+. . ..+-+.+.++|+.| ++.|..++++|+.+ .....+.+
T Consensus 12 ~~~~~l~D~DGvl~~---g-~~~~p~a~~~l~~l-~~~g~~~~~vTNn~~~~~~~~~~~l 66 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFR---G-KKPIAGASDALKLL-NRNKIPYILLTNGGGFSERARTEFI 66 (352)
T ss_dssp CCEEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCCEEEECSCCSSCHHHHHHHH
T ss_pred cCCEEEEECCCeeEc---C-CeeCcCHHHHHHHH-HHCCCEEEEEeCCCCCCchHHHHHH
Confidence 679999999999998 2 34456788899998 77899999999654 44444443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.59 E-value=6e-05 Score=87.93 Aligned_cols=173 Identities=6% Similarity=-0.075 Sum_probs=102.0
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV-QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv-qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
..++....|+ .|..+..++++.++|++.|+.+ .++ .++. +.+.. ..+.++..+ ..|. ..|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~---~~g~~-~~~~~~~~~--~GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ---SNGIT-HPYVERFIK--SYLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS---CCGGG-HHHHHHHHH--HHHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC---Cchhh-HHHHHHHHH--cCCC--------ccE
Confidence 4566677875 7999999999999999999742 222 2331 12222 222222221 2231 123
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--- 490 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--- 490 (863)
.|.+.++.++..++|+.||+|+.|+.+.| |++++|||+| |.|+|.....+.+.-+.
T Consensus 502 -~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm-------------------GVPVVTl~G~~~asRvgaSl 560 (631)
T 3q3e_A 502 -TAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL-------------------GLVGVCKTGAEVHEHIDEGL 560 (631)
T ss_dssp -EEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT-------------------TCCEEEECCSSHHHHHHHHH
T ss_pred -EEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc-------------------CCCEEeccCCcHHHHhHHHH
Confidence 46688999999999999999999998876 9999999999 34455432221111110
Q ss_pred ----C--ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccC-CHHHHHHHHHHHHHHHH
Q 002955 491 ----G--AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTH-DVAYWARSFLQDLERAC 549 (863)
Q Consensus 491 ----~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~ 549 (863)
| ..+| -.|.++.++...++.+.++. ++...+++++.+.+. -+..|.+.|-+.++++.
T Consensus 561 L~~~GLpE~LI-A~d~eeYv~~Av~La~D~~~-l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 561 FKRLGLPEWLI-ANTVDEYVERAVRLAENHQE-RLELRRYIIENNGLNTLFTGDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHTTCCGGGE-ESSHHHHHHHHHHHHHCHHH-HHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHH
T ss_pred HHhcCCCccee-cCCHHHHHHHHHHHhCCHHH-HHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHH
Confidence 1 2122 24788998888888876543 333344444443221 01134444444444443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00028 Score=78.54 Aligned_cols=97 Identities=12% Similarity=0.013 Sum_probs=59.5
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCcccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCSPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~~~l- 489 (863)
.+.+.++. ..++..||++|. .|-+.+..|||+| +.|+|+ .+..+.++.+
T Consensus 287 ~~~~~~~~---~~ll~~ad~~v~----~gG~~t~~Ea~~~-------------------G~P~v~~p~~~~q~~~a~~~~ 340 (398)
T 4fzr_A 287 LAAGQFPL---SAIMPACDVVVH----HGGHGTTLTCLSE-------------------GVPQVSVPVIAEVWDSARLLH 340 (398)
T ss_dssp EEESCCCH---HHHGGGCSEEEE----CCCHHHHHHHHHT-------------------TCCEEECCCSGGGHHHHHHHH
T ss_pred EEeCcCCH---HHHHhhCCEEEe----cCCHHHHHHHHHh-------------------CCCEEecCCchhHHHHHHHHH
Confidence 45567764 456677999983 4446688999999 445666 4444555555
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHH-HhhhhccCCHHHHHH
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEK-HYRYVSTHDVAYWAR 539 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~W~~ 539 (863)
..|+++++. |.++++++|.++|+.+.. +.++.+ ..++.........++
T Consensus 341 ~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 341 AAGAGVEVPWEQAGVESVLAACARIRDDSSY--VGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HTTSEEECC-------CHHHHHHHHHHCTHH--HHHHHHHHHHHTTSCCHHHHHH
T ss_pred HcCCEEecCcccCCHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHcCCCHHHHHH
Confidence 247888877 788999999999987632 333333 444445555554443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=1.6e-05 Score=78.57 Aligned_cols=51 Identities=14% Similarity=0.279 Sum_probs=38.7
Q ss_pred HhcccceeEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 588 KRTKNRAILLDYDGTIMVPGS--------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
..+.+|++++|+||||+...+ ....+.+.+.++|++| ++.|+.++|+|+.+
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~G~~l~i~Tn~~ 68 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 68 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHH-HHCCCEEEEEECCc
Confidence 356789999999999987421 1234668899999998 77799999999974
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.39 E-value=2.8e-05 Score=82.02 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=44.0
Q ss_pred cccceeEecCCccccCCCC----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChh---hHH
Q 002955 590 TKNRAILLDYDGTIMVPGS----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRD---TLA 644 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~---~l~ 644 (863)
.++++|+||+||||++..+ ....+.+.+.++|+.| ++.|+.++|+|||+.. .+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYT-ESKGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHH-HHTTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCEEEEEcCCchhHHHHHH
Confidence 4578999999999998310 0156778999999998 7889999999999944 444
Q ss_pred HHh
Q 002955 645 EWF 647 (863)
Q Consensus 645 ~~~ 647 (863)
..+
T Consensus 136 ~~L 138 (258)
T 2i33_A 136 KNL 138 (258)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00013 Score=80.84 Aligned_cols=154 Identities=11% Similarity=0.054 Sum_probs=96.6
Q ss_pred CCeEEEeecCcccccCH-HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 334 GQIVMLGVDDMDIFKGI-SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi-~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+.+++.+|++...|+. ...+.++.+. +++|+++ ++.++.+ .+.+.+. ...+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~-----------------~~~~ 270 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT-----------------DLPD 270 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT-----------------TCCT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc-----------------cCCC
Confidence 35678889999887666 7888888888 8888765 6655532 2211111 0011
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCccc
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCSPS 488 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~~~ 488 (863)
-+.+.+.++..++ +..||++|. .|-..+..|+++| +.|+|+ .+-.+.+..
T Consensus 271 ~v~~~~~~~~~~l---l~~ad~~v~----~~G~~t~~Ea~~~-------------------G~P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 271 NARIAESVPLNLF---LRTCELVIC----AGGSGTAFTATRL-------------------GIPQLVLPQYFDQFDYARN 324 (391)
T ss_dssp TEEECCSCCGGGT---GGGCSEEEE----CCCHHHHHHHHHT-------------------TCCEEECCCSTTHHHHHHH
T ss_pred CEEEeccCCHHHH---HhhCCEEEe----CCCHHHHHHHHHh-------------------CCCEEecCCcccHHHHHHH
Confidence 2345567776554 499999984 3444678999999 345666 333444444
Q ss_pred C---CCceEeCC----CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 002955 489 L---SGAIRVNP----WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 541 (863)
Q Consensus 489 l---~~al~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 541 (863)
+ ..|+.++| .|.++++++|.++|+.+.. ++...+...++.........++.+
T Consensus 325 ~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGF-AAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHH-HHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 34788988 7899999999999987643 222223334444556655555433
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00035 Score=87.61 Aligned_cols=163 Identities=17% Similarity=0.186 Sum_probs=92.0
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHH
Q 002955 611 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVM 690 (863)
Q Consensus 611 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~ 690 (863)
.++.+++.+++++| ++.|+.|+++||+.......+...+ ++..++|..+ .+ +.
T Consensus 598 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~~l---gi~~~~~~~i-------------------~~----~~ 650 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETI-------------------ED----IA 650 (1028)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TSSCTTCCCH-------------------HH----HH
T ss_pred CCCChhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHHc---CCCCCCchhH-------------------HH----HH
Confidence 35678999999997 8899999999999999998888654 4444333211 00 00
Q ss_pred HHHhhcCCCceeee-ccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 691 KLYTETTDGSTIET-KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 691 ~~y~~~~~gs~ie~-k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
+.. ..+-..+.. ........-...+. . ..++ +.+.+......+ +..+.|. .|...++.+.+.
T Consensus 651 ~~~--~~~~~~~~~~~~~~~vi~G~~l~~-~---~~~~----l~~~~~~~~~~v-----~ar~~P~--~K~~iV~~lq~~ 713 (1028)
T 2zxe_A 651 ARL--NIPIGQVNPRDAKACVVHGSDLKD-L---STEV----LDDILHYHTEIV-----FARTSPQ--QKLIIVEGCQRQ 713 (1028)
T ss_dssp HHT--TCCGGGSCGGGCCEEEEEHHHHTT-C---CHHH----HHHHHHHCSEEE-----EESCCHH--HHHHHHHHHHHT
T ss_pred hhc--CcchhhccccccceEEEEcHHhhh-C---CHHH----HHHHHhhCCcEE-----EEEcCHH--HHHHHHHHHHhC
Confidence 000 000000000 00111111111100 0 0111 222222221111 2233443 699998888663
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C----ccccceecC--CHhHHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K----PSKAKYYLD--DTAEILRMLL 838 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~--d~~eV~~~L~ 838 (863)
| ..|+++||+.||.+||+.|+. +|++|. . +..|++++. +.+.+.+.++
T Consensus 714 ----g---~~V~~iGDG~ND~paLk~Adv--------------GIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 ----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp ----T---CCEEEEECSGGGHHHHHHSSE--------------EEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred ----C---CEEEEEcCCcchHHHHHhCCc--------------eEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 4 569999999999999999985 677773 3 467889874 4666766654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00039 Score=71.40 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=59.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-------cccce
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKY 825 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y 825 (863)
+.+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|... ..|+|
T Consensus 147 ~~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~ 212 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADY 212 (241)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSE
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCE
Confidence 34455779999999999 99999999999998 999999999974 2455556421 26889
Q ss_pred ecCCHhHHHHHHHHH
Q 002955 826 YLDDTAEILRMLLGL 840 (863)
Q Consensus 826 ~l~d~~eV~~~L~~L 840 (863)
++++..++.++|+.+
T Consensus 213 ~i~~~~el~~~l~~~ 227 (241)
T 2hoq_A 213 EIDNLESLLEVLARE 227 (241)
T ss_dssp EESSTTHHHHHHHHC
T ss_pred EECCHHHHHHHHHHH
Confidence 999999999888764
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00087 Score=75.33 Aligned_cols=100 Identities=11% Similarity=-0.035 Sum_probs=64.5
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----CcccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~~~~l- 489 (863)
.+.+.+++. .+|+.||++|..+ |. .+.+|||+| +.|+|+.-..| .++.+
T Consensus 286 ~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~-------------------G~P~i~~p~~~~q~~~a~~~~ 339 (430)
T 2iyf_A 286 EVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLAT-------------------ATPMIAVPQAVDQFGNADMLQ 339 (430)
T ss_dssp EEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHT-------------------TCCEEECCCSHHHHHHHHHHH
T ss_pred EEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHh-------------------CCCEEECCCccchHHHHHHHH
Confidence 455677765 6899999988754 44 588999999 45577766544 23333
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHH-HhhhhccCCHHHHHHHHH
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEK-HYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~W~~~~l 542 (863)
..|+.+++. |.++++++|.++|+.+ +. +.++.+ ..+....+.....++.+.
T Consensus 340 ~~g~g~~~~~~~~~~~~l~~~i~~ll~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 340 GLGVARKLATEEATADLLRETALALVDDP-EV-ARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HTTSEEECCCC-CCHHHHHHHHHHHHHCH-HH-HHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HcCCEEEcCCCCCCHHHHHHHHHHHHcCH-HH-HHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 347888876 8899999999999754 33 333333 333333444444444443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0011 Score=83.16 Aligned_cols=142 Identities=16% Similarity=0.231 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHH
Q 002955 611 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVM 690 (863)
Q Consensus 611 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~ 690 (863)
..+.+++.+++++| ++.|+.++++||+.......+...+ ++...+... .
T Consensus 602 D~lr~~~~~~I~~l-~~~Gi~v~miTGD~~~ta~~ia~~l---gi~~~~~~i---------------~------------ 650 (995)
T 3ar4_A 602 DPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRRI---GIFGENEEV---------------A------------ 650 (995)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHH---TSSCTTCCC---------------T------------
T ss_pred CCCchhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHHc---CcCCCCCcc---------------c------------
Confidence 34667889999997 8889999999999999998888644 332221100 0
Q ss_pred HHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHH
Q 002955 691 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 770 (863)
Q Consensus 691 ~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l 770 (863)
+..+.-++ +...++ +++.+.+ .+ ..-+.++.|. +|+.+++.+.++
T Consensus 651 --------~~~~~g~~------~~~l~~-------~~~~~~~----~~-------~~v~~r~~P~--~K~~~v~~l~~~- 695 (995)
T 3ar4_A 651 --------DRAYTGRE------FDDLPL-------AEQREAC----RR-------ACCFARVEPS--HKSKIVEYLQSY- 695 (995)
T ss_dssp --------TTEEEHHH------HHTSCH-------HHHHHHH----HH-------CCEEESCCSS--HHHHHHHHHHTT-
T ss_pred --------ceEEEchh------hhhCCH-------HHHHHHH----hh-------CcEEEEeCHH--HHHHHHHHHHHC-
Confidence 00000000 000100 1111112 11 1224455665 799999988753
Q ss_pred hhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceec--CCHhHHHHHHH
Q 002955 771 HQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 771 ~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~eV~~~L~ 838 (863)
| +.|+++||+.||.+||+.++. ++++|+. +..|++++ ++...+.+++.
T Consensus 696 ---g---~~v~~~GDG~ND~~alk~Adv--------------giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 ---D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp ---T---CCEEEEECSGGGHHHHHHSTE--------------EEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred ---C---CEEEEEcCCchhHHHHHHCCe--------------EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 3 679999999999999999985 5677743 46788988 45677776653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.00014 Score=76.84 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=37.4
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
++..+|+.+...-.....+-+.+.++|++| ++.|+.++++||.+.......+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~~~ 171 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKL-KNEGLKIIILSGDKEDKVKELSK 171 (263)
Confidence 455555555531112345678889999998 78899999999998877766663
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00074 Score=77.49 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
....+.+++++ |++++++++|||+.+|+.+.+.+|..
T Consensus 163 p~~~~~~~~~l---g~~p~~~~~v~D~~~di~~a~~aG~~ 199 (555)
T 3i28_A 163 PQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV 199 (555)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHc---CCChhHEEEECCcHHHHHHHHHcCCE
Confidence 56788899999 99999999999999999999999973
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0015 Score=73.61 Aligned_cols=49 Identities=16% Similarity=0.195 Sum_probs=38.6
Q ss_pred cccceeEecCCccccCCCCC--------C-CCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 590 TKNRAILLDYDGTIMVPGSI--------S-TSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~--------~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
+++|+++||+||||+...+. + ..+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHH-HHTTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHH-HHCCCeEEEEeCCc
Confidence 45799999999999863210 0 12568899999998 88899999999976
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0021 Score=79.10 Aligned_cols=165 Identities=14% Similarity=0.151 Sum_probs=101.7
Q ss_pred HHHHhcccceeEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccC
Q 002955 585 SAYKRTKNRAILLDYDG-----TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 659 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaen 659 (863)
+.|.+...|.+++=++. +++.--....++.+++.++++++ ++.|+.++++||........+..++ |+...
T Consensus 503 ~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l-~~aGI~v~MiTGD~~~TA~aIA~~l---GI~~~- 577 (920)
T 1mhs_A 503 AEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA-KTLGLSIKMLTGDAVGIARETSRQL---GLGTN- 577 (920)
T ss_dssp HHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH-HHHTCEEEEEESSCHHHHHHHHHHH---TSSCS-
T ss_pred HHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH-hhcCceEEEEcCCCHHHHHHHHHHc---CCCcc-
Confidence 44445556777765543 55542224567889999999997 8899999999999999998888654 33110
Q ss_pred cEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCC
Q 002955 660 GYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE 739 (863)
Q Consensus 660 Ga~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~ 739 (863)
.+ ..+ .. ...|. . .. .+.+ +.+.+.+.
T Consensus 578 --~~-~~~-----------~~---------------~~~g~---~-------~~--~~~e------------l~~~~~~~ 604 (920)
T 1mhs_A 578 --IY-NAE-----------RL---------------GLGGG---G-------DM--PGSE------------VYDFVEAA 604 (920)
T ss_dssp --CC-CSS-----------SS---------------SSCBC---C-------CG--GGGG------------GGTTTTTT
T ss_pred --cc-Ccc-----------ce---------------eecCc---c-------cC--CHHH------------HHHHHhhC
Confidence 00 000 00 00010 0 00 0000 11111111
Q ss_pred CeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC
Q 002955 740 PVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK 819 (863)
Q Consensus 740 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 819 (863)
.-+-++.|. +|...++.+.++ | +.|+++||+.||.+||+.++. ++++|+.
T Consensus 605 -------~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Adv--------------GIAmg~g 654 (920)
T 1mhs_A 605 -------DGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKADT--------------GIAVEGS 654 (920)
T ss_dssp -------SCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSSE--------------EEEETTS
T ss_pred -------eEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCCc--------------Ccccccc
Confidence 234566665 799999998653 4 579999999999999999985 6777753
Q ss_pred ----ccccceecC--CHhHHHHHH
Q 002955 820 ----PSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 820 ----~s~A~y~l~--d~~eV~~~L 837 (863)
+..|++++. +...+.+.+
T Consensus 655 td~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 655 SDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp CHHHHHSSSEEESSCCSHHHHHHH
T ss_pred cHHHHHhcCeEEcCCCHHHHHHHH
Confidence 467888873 445555444
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0018 Score=62.94 Aligned_cols=123 Identities=12% Similarity=0.111 Sum_probs=79.9
Q ss_pred CCeEEEeecCcc---cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIVMLGVDDMD---IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
...+++++|++. +.|++...++|+.++ + ++ ++.++.+.. .+ ..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~----- 66 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TL----- 66 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TC-----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cC-----
Confidence 467899999994 677888888877432 2 22 444442211 00 00
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc----cCc
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV----GCS 486 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~----G~~ 486 (863)
.+-+.+.+.+++.++.++ ..||++|.. -| +.+..|+++|+ .|+|+.-+. +.+
T Consensus 67 ~~~v~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G-------------------~P~i~~p~~~~Q~~na 122 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHG-------------------IPMVGIPLFADQPDNI 122 (170)
T ss_dssp CTTEEEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHT-------------------CCEEECCCSTTHHHHH
T ss_pred CCcEEEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcC-------------------CCEEeccchhhHHHHH
Confidence 111345678888777664 999999963 34 47999999993 456666553 223
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhCCC
Q 002955 487 PSL---SGAIRVNPW--NIDAVAEAMDSALGVS 514 (863)
Q Consensus 487 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~ 514 (863)
..+ ..|+.+++. +.++++++|.++|+.+
T Consensus 123 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 333 347888876 8899999999999754
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00049 Score=70.06 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=24.3
Q ss_pred HHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 763 AQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 763 l~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
...+++++ |+ +++|||+.+|+.+.+.+|.
T Consensus 151 ~~~~~~~~---g~----~l~VGDs~~Di~aA~~aG~ 179 (211)
T 2b82_A 151 KSQWLQDK---NI----RIFYGDSDNDITAARDVGA 179 (211)
T ss_dssp SHHHHHHT---TE----EEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHC---CC----EEEEECCHHHHHHHHHCCC
Confidence 35566666 65 9999999999999999997
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0076 Score=66.42 Aligned_cols=138 Identities=11% Similarity=-0.004 Sum_probs=84.5
Q ss_pred CeEEEeecCcccc-------cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 335 QIVMLGVDDMDIF-------KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 335 ~~vil~Vdrld~~-------KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
..+++++|++... +.+...++|++++ +++ ++.++. +++.+ ++. .+.
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~----~l~----~~~----- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAE----ALR----AEV----- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHH----HHH----HHC-----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHH----hhC----CCC-----
Confidence 5689999999875 5677777777542 333 444431 12211 221 111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc---
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG--- 484 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G--- 484 (863)
. .| .+ +.++..+ +|..||+||..+ | ..+..|+|+| +.|+|+.-..+
T Consensus 264 ~---~v-~~-~~~~~~~---~l~~~d~~v~~~---G-~~t~~Ea~~~-------------------G~P~v~~p~~~dq~ 312 (384)
T 2p6p_A 264 P---QA-RV-GWTPLDV---VAPTCDLLVHHA---G-GVSTLTGLSA-------------------GVPQLLIPKGSVLE 312 (384)
T ss_dssp T---TS-EE-ECCCHHH---HGGGCSEEEECS---C-TTHHHHHHHT-------------------TCCEEECCCSHHHH
T ss_pred C---ce-EE-cCCCHHH---HHhhCCEEEeCC---c-HHHHHHHHHh-------------------CCCEEEccCcccch
Confidence 0 13 34 6777654 578999999753 4 4578999999 44566665533
Q ss_pred -CcccC---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccC
Q 002955 485 -CSPSL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 485 -~~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 532 (863)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+...
T Consensus 313 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 313 APARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISGM 364 (384)
T ss_dssp HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhC
Confidence 33333 347888765 7899999999999754 3444555555444443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0062 Score=67.18 Aligned_cols=89 Identities=11% Similarity=0.057 Sum_probs=54.9
Q ss_pred HHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc--------ccC---CC
Q 002955 423 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS--------PSL---SG 491 (863)
Q Consensus 423 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~--------~~l---~~ 491 (863)
+++..+|+.||++|.. -| +.+..|+++|+ -|.|+.-+.+.. +.+ ..
T Consensus 244 ~dm~~~l~~aDlvI~r---aG-~~Tv~E~~a~G-------------------~P~Ilip~p~~~~~~Q~~NA~~l~~~G~ 300 (365)
T 3s2u_A 244 SDMAAAYAWADLVICR---AG-ALTVSELTAAG-------------------LPAFLVPLPHAIDDHQTRNAEFLVRSGA 300 (365)
T ss_dssp SCHHHHHHHCSEEEEC---CC-HHHHHHHHHHT-------------------CCEEECC-----CCHHHHHHHHHHTTTS
T ss_pred hhhhhhhccceEEEec---CC-cchHHHHHHhC-------------------CCeEEeccCCCCCcHHHHHHHHHHHCCC
Confidence 4688999999998854 35 56788999994 345554444322 223 23
Q ss_pred ceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHH
Q 002955 492 AIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536 (863)
Q Consensus 492 al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 536 (863)
|++++.. +.++++++|.++|+.|+ ++.+|....+.+...+...
T Consensus 301 a~~l~~~~~~~~~L~~~i~~ll~d~~--~~~~m~~~a~~~~~~~aa~ 345 (365)
T 3s2u_A 301 GRLLPQKSTGAAELAAQLSEVLMHPE--TLRSMADQARSLAKPEATR 345 (365)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHCTH--HHHHHHHHHHHTCCTTHHH
T ss_pred EEEeecCCCCHHHHHHHHHHHHCCHH--HHHHHHHHHHhcCCccHHH
Confidence 6777654 58899999999998763 3333443333343444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0027 Score=77.99 Aligned_cols=171 Identities=13% Similarity=0.146 Sum_probs=102.3
Q ss_pred HHHHHHHHHhcccceeEecCC-------------ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 580 IDHIVSAYKRTKNRAILLDYD-------------GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 580 ~~~i~~~y~~s~~rlI~~DlD-------------GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
.....+.|.+...|.+++=++ .|++.--....++-+++.+++++| ++.|+.++++||........+
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l-~~aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHH-HHTTCCCEEEESSCHHHHTHH
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHH-HHcCCcEEEEcCCChHHHHHH
Confidence 344555665556677777553 244321112346789999999997 889999999999999998888
Q ss_pred hhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHH
Q 002955 647 FSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAK 726 (863)
Q Consensus 647 ~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~ 726 (863)
..++ |+.... .+.. . + .|...+. .. .+. ...
T Consensus 522 A~~l---Gi~~~~-----~~~~-~----l----------------------~g~~~~~-------~~--~~~-----~l~ 552 (885)
T 3b8c_A 522 GRRL---GMGTNM-----YPSS-A----L----------------------LGTHKDA-------NL--ASI-----PVE 552 (885)
T ss_dssp HHTT---TCTTCC-----STTS-S----C----------------------CBGGGGT-------TS--CCS-----CHH
T ss_pred HHHh---CCcccc-----CCcc-e----e----------------------ecccccc-------cc--chh-----HHH
Confidence 8643 442100 0000 0 0 0000000 00 000 111
Q ss_pred HHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCC
Q 002955 727 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLS 806 (863)
Q Consensus 727 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~ 806 (863)
+.+.+. .-+-++.|. +|...++.+.++ | +.|+++||+.||.+||+.++.+++
T Consensus 553 -------~~~~~~-------~v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~AdvGIA----- 604 (885)
T 3b8c_A 553 -------ELIEKA-------DGFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKADIGIA----- 604 (885)
T ss_dssp -------HHHHTS-------CCEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSSSCCC-----
T ss_pred -------HHHhhC-------cEEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCCEeEE-----
Confidence 112221 224466675 799999998764 4 579999999999999999997544
Q ss_pred CCcceEEEEeCC----CccccceecC--CHhHHHHHH
Q 002955 807 PVAEVFACTVGQ----KPSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 807 ~~~~~~av~vG~----~~s~A~y~l~--d~~eV~~~L 837 (863)
+|+ .+..|++++. +...+.+.+
T Consensus 605 ---------mg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 605 ---------VADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp ---------CSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred ---------eCCccHHHHHhcceeeccCchhHHHHHH
Confidence 443 2567888874 355554443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.032 Score=59.43 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=37.9
Q ss_pred ccceeEecCCccccCCCCCC---------CCCCHHHHHHHHHhhcCCCCeEEEEcCCChh
Q 002955 591 KNRAILLDYDGTIMVPGSIS---------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRD 641 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~---------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 641 (863)
..+.+++|+|||+....... ..+-+.+.++|+.| ++.|+.++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 34688899999987631110 12468999999999 7789999999999743
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.0067 Score=60.19 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=18.2
Q ss_pred HHHHHhhcCCCcceEEEEeCCcch
Q 002955 766 QLETMHQKGMLPDFVLCIGDDRSD 789 (863)
Q Consensus 766 Ll~~l~~~gi~~d~vlaiGD~~ND 789 (863)
.++++ |++++++++|||+.+|
T Consensus 122 ~~~~~---~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 122 FVERI---ILTRDKTVVLGDLLID 142 (193)
T ss_dssp HHTTE---EECSCGGGBCCSEEEE
T ss_pred HHHHc---CCCcccEEEECCchhh
Confidence 35666 8999999999999999
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.034 Score=57.94 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhh-hcCCCCCCCCcceEEEEeCC-----CccccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKS-AAAGPSLSPVAEVFACTVGQ-----KPSKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~-~~~~~~~~~~~~~~av~vG~-----~~s~A~y~l~d~~ 831 (863)
+....+.+++++ |++++++++|||+ .||+.+.+.+|. . ++.+..+. ....|+|++++..
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~~-----------~i~v~~~~~~~~~~~~~~~~~i~~~~ 243 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHYMVSSVL 243 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSEEESSGG
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCce-----------EEEEcCCCCCcCcccCCCCEEECCHH
Confidence 367889999999 9999999999996 999999999986 2 12333222 1246889999999
Q ss_pred HHHHHHHHHH
Q 002955 832 EILRMLLGLA 841 (863)
Q Consensus 832 eV~~~L~~L~ 841 (863)
++.++|+.+.
T Consensus 244 el~~~l~~~~ 253 (260)
T 2gfh_A 244 ELPALLQSID 253 (260)
T ss_dssp GHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999887764
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.048 Score=60.00 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=63.0
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc-----cccCcccC
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-----FVGCSPSL 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe-----~~G~~~~l 489 (863)
.+.+.++.. .++..||++|..+ |. .+..|+++++ .|+|+.- ..+.+..+
T Consensus 284 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G-------------------~P~v~~p~~~~~q~~~a~~~ 337 (402)
T 3ia7_A 284 EAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAG-------------------VPLVLVPHFATEAAPSAERV 337 (402)
T ss_dssp EEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTT-------------------CCEEECGGGCGGGHHHHHHH
T ss_pred EEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhC-------------------CCEEEeCCCcccHHHHHHHH
Confidence 455677776 7889999988665 33 4678999994 4455332 23444444
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHH
Q 002955 490 ---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFL 542 (863)
Q Consensus 490 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 542 (863)
..|+.+++. +.+++++++.++|+.+ +.+.++.+..+.+.. .....-++.+.
T Consensus 338 ~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 338 IELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 236788776 8999999999999864 334444444444433 44444444433
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.061 Score=59.66 Aligned_cols=99 Identities=15% Similarity=0.020 Sum_probs=61.7
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCcccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCSPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~~~l- 489 (863)
.+.+.+++. .++..||++|..+ |. .+..|+++++ .|+|+ .+-.+.+..+
T Consensus 300 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G-------------------~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 300 EAHRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG-------------------RPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp EEESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT-------------------CCEEECCCSGGGHHHHHHHH
T ss_pred EEEecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC-------------------CCEEEeCCcchHHHHHHHHH
Confidence 345677766 7788899988654 44 3678999984 34555 3333333333
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHH
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSF 541 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~ 541 (863)
..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+.. ......++.+
T Consensus 354 ~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 354 QLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 236777765 8899999999999864 334444444444433 4444444433
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.0073 Score=63.21 Aligned_cols=57 Identities=18% Similarity=0.292 Sum_probs=42.0
Q ss_pred cceeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChh----hHH
Q 002955 592 NRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRD----TLA 644 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~----~l~ 644 (863)
..+++||+||||++..+ ....+-+.+.+.|+.| ++.|+.++|+|||+.. ...
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L-~~~G~~i~ivTgR~~~~~r~~T~ 136 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYV-NANGGTMFFVSNRRDDVEKAGTV 136 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHH-HHTTCEEEEEEEEETTTSHHHHH
T ss_pred CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccccHHHHH
Confidence 45999999999997320 0122346788889998 7789999999999764 566
Q ss_pred HHhhc
Q 002955 645 EWFSS 649 (863)
Q Consensus 645 ~~~~~ 649 (863)
.++..
T Consensus 137 ~~L~~ 141 (260)
T 3pct_A 137 DDMKR 141 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66643
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.05 Score=61.25 Aligned_cols=146 Identities=10% Similarity=-0.050 Sum_probs=83.2
Q ss_pred CeEEEeecCcccc-----cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCC
Q 002955 335 QIVMLGVDDMDIF-----KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409 (863)
Q Consensus 335 ~~vil~Vdrld~~-----KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~ 409 (863)
..|+++.|++... |.+...++|+..+ +++ +|.++... +.++++ .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~-----~~~~l~-----------------~ 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDAQ-----QLEGVA-----------------N 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCTT-----TTSSCS-----------------S
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECCc-----chhhhc-----------------c
Confidence 4688999999864 8888888887542 232 44333211 111110 0
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----C
Q 002955 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----C 485 (863)
Q Consensus 410 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~ 485 (863)
..+-+.+.+.+++.+ +|..||++|. +-| ..+..|+++| +.|+|+.-+.+ .
T Consensus 317 ~~~~v~~~~~~~~~~---ll~~ad~~V~---~~G-~~t~~Ea~~~-------------------G~P~i~~p~~~dQ~~n 370 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHA---LLPTCAATVH---HGG-PGSWHTAAIH-------------------GVPQVILPDGWDTGVR 370 (441)
T ss_dssp CCSSEEECCSCCHHH---HGGGCSEEEE---CCC-HHHHHHHHHT-------------------TCCEEECCCSHHHHHH
T ss_pred CCCCEEEecCCCHHH---HHhhCCEEEE---CCC-HHHHHHHHHh-------------------CCCEEEeCCcccHHHH
Confidence 112235667888754 5799999996 345 4578999999 44566665533 3
Q ss_pred cccC---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHH
Q 002955 486 SPSL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWAR 539 (863)
Q Consensus 486 ~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 539 (863)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+. ......-++
T Consensus 371 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 371 AQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3333 347888775 8899999999999754 33444444444443 344444333
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.59 E-value=0.0085 Score=62.76 Aligned_cols=59 Identities=15% Similarity=0.246 Sum_probs=42.1
Q ss_pred cccceeEecCCccccCCCC-----------C------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChh----h
Q 002955 590 TKNRAILLDYDGTIMVPGS-----------I------------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRD----T 642 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~-----------~------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~----~ 642 (863)
.+..+|+||+||||++..+ - ...+-+.+.+.|+.| ++.|+.++|+|||+.. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L-~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYV-NSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHH-HHTTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccchHHH
Confidence 3457999999999997321 0 112335677788888 7789999999999764 5
Q ss_pred HHHHhhc
Q 002955 643 LAEWFSS 649 (863)
Q Consensus 643 l~~~~~~ 649 (863)
...++..
T Consensus 135 T~~~L~~ 141 (262)
T 3ocu_A 135 TIDDMKR 141 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666643
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.027 Score=57.59 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cc-ccceecCCHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PS-KAKYYLDDTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s-~A~y~l~d~~ 831 (863)
..|..++ +++ |++++++++|||+.+|+.|.+.+|.. ++..|.. .. .|.+.+++..
T Consensus 150 ~~K~~~~----~~~---~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (236)
T 2fea_A 150 CCKPSVI----HEL---SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDFY 209 (236)
T ss_dssp SCHHHHH----HHH---CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSHH
T ss_pred CcHHHHH----HHH---hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCHH
Confidence 3576655 455 88999999999999999999999863 2222221 12 2778899999
Q ss_pred HHHHHHHHHHHh
Q 002955 832 EILRMLLGLAEA 843 (863)
Q Consensus 832 eV~~~L~~L~~~ 843 (863)
++.++|..+.+.
T Consensus 210 el~~~l~~~~~~ 221 (236)
T 2fea_A 210 EIRKEIENVKEV 221 (236)
T ss_dssp HHHHHHHTSHHH
T ss_pred HHHHHHHHhHHH
Confidence 999998876543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=94.14 E-value=0.06 Score=59.52 Aligned_cols=148 Identities=9% Similarity=-0.027 Sum_probs=80.7
Q ss_pred CCeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 334 GQIVMLGVDDMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 334 ~~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+.+++++|++... |+......+++.+.+ . +++ ++.++.+. +.+.+. ...+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~l~-----------------~~~~ 283 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISPLG-----------------TLPR 283 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGGGC-----------------SCCT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhhhc-----------------cCCC
Confidence 45788999999655 344444444444432 2 333 55555332 111111 0011
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCc--
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCS-- 486 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~-- 486 (863)
-+.+.+.++..+ ++..||++|- .|-..+..|+++|+ .|+|+ .+-.+.+
T Consensus 284 ~v~~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Eal~~G-------------------~P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 284 NVRAVGWTPLHT---LLRTCTAVVH----HGGGGTVMTAIDAG-------------------IPQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp TEEEESSCCHHH---HHTTCSEEEE----CCCHHHHHHHHHHT-------------------CCEEECCCTTCCSSCTTH
T ss_pred cEEEEccCCHHH---HHhhCCEEEE----CCCHHHHHHHHHhC-------------------CCEEEcCCCchhHHHHHH
Confidence 234556776554 5667999984 33345789999993 45666 5556666
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHH-hhhhccCCHHHHHHHH
Q 002955 487 PSL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKH-YRYVSTHDVAYWARSF 541 (863)
Q Consensus 487 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~-~~~v~~~~~~~W~~~~ 541 (863)
+.+ ..|+.+++. +.++++ ++|+.+ +.+.++++. .+..........++.+
T Consensus 338 ~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 338 EAVSRRGIGLVSTSDKVDADLLR----RLIGDE--SLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHHHTSEEECCGGGCCHHHHH----HHHHCH--HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHCCCEEeeCCCCCCHHHHH----HHHcCH--HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 347888776 455555 666643 333334443 4444556655555433
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.11 E-value=0.032 Score=55.33 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+..+++.+++++ |++++++++|||+.||+.|++.+|..
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~~ 189 (211)
T 2i6x_A 152 NEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGFH 189 (211)
T ss_dssp SHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCCE
Confidence 466899999999 99999999999999999999999973
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=93.46 E-value=0.067 Score=53.96 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=36.6
Q ss_pred CCCH--HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 756 GVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 756 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+..| ..+.+.+++++ |++++++++|||+.||+.|.+.+|..
T Consensus 170 ~~~KP~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~~ 212 (229)
T 4dcc_A 170 KMAKPEPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGIS 212 (229)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred CCCCCCHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCCE
Confidence 4455 48899999999 99999999999999999999999974
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=92.40 E-value=0.15 Score=51.39 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 647 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 647 (863)
+.+.+.+.|+.| ++. +.++|+|+.+........
T Consensus 113 ~~~~~~~~l~~l-~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 113 IPTYKLDLLLKL-REK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCHHHHHHHHHH-TTT-SEEEEEECCCHHHHHHHH
T ss_pred ccHHHHHHHHHH-Hhc-CcEEEEECCChHHHHHHH
Confidence 346777888888 555 899999998888776444
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=90.03 E-value=0.86 Score=50.53 Aligned_cols=96 Identities=10% Similarity=-0.029 Sum_probs=60.1
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----CcccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~~~~l- 489 (863)
.+.+.+++. .+|..||++|.. -|. .+..|+++++ .|+|+.-+.+ .+..+
T Consensus 308 ~~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G-------------------~P~i~~p~~~dQ~~na~~l~ 361 (424)
T 2iya_A 308 EVHQWVPQL---DILTKASAFITH---AGM-GSTMEALSNA-------------------VPMVAVPQIAEQTMNAERIV 361 (424)
T ss_dssp EEESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTT-------------------CCEEECCCSHHHHHHHHHHH
T ss_pred EEecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcC-------------------CCEEEecCccchHHHHHHHH
Confidence 445677775 578899987753 344 5789999984 4455554432 22222
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
..|+.+++. +.++++++|.++|+.+ +.+.+..++.+.+...+...-+
T Consensus 362 ~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~ 412 (424)
T 2iya_A 362 ELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGARAA 412 (424)
T ss_dssp HTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHH
T ss_pred HCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHH
Confidence 236777664 8899999999999754 3444555555555444433333
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=89.75 E-value=0.66 Score=51.43 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=80.4
Q ss_pred CCeEEEeecCc-ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 334 GQIVMLGVDDM-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 334 ~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
...++++.|++ +..|.+...++|++++ + .+ ++.+..+. . .+ . . ...+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~---~----~-------------~~~~ 285 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV---L----P-------------DDGA 285 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC---C----S-------------SCGG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc---c----c-------------CCCC
Confidence 35688999999 6888888888888654 2 22 33332111 0 00 0 0 0111
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----Cccc
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPS 488 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~~~~ 488 (863)
-+.+.+.+++.++ +..||+||-. -|. .+..|+++++ .|+|+--+.+ .+..
T Consensus 286 ~v~~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~G-------------------~P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 286 DCFAIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARAG-------------------APQILLPQMADQPYYAGR 339 (415)
T ss_dssp GEEECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHHT-------------------CCEEECCCSTTHHHHHHH
T ss_pred CEEEeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHcC-------------------CCEEECCCCCccHHHHHH
Confidence 2345678887664 6999999964 455 5789999994 4455554433 2333
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 489 L---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 489 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
+ ..|+.+++. +.++++++|.++ +.+ +.+.++++..+.+..
T Consensus 340 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 340 VAELGVGVAHDGPIPTFDSLSAALATA-LTP--ETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHH-TSH--HHHHHHHHHHHHSCS
T ss_pred HHHCCCcccCCcCCCCHHHHHHHHHHH-cCH--HHHHHHHHHHHHHhh
Confidence 3 346777653 789999999999 643 334445454444443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=88.81 E-value=0.35 Score=53.55 Aligned_cols=55 Identities=22% Similarity=0.236 Sum_probs=43.3
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---------ccccceecCCHhHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---------PSKAKYYLDDTAEILRMLLG 839 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---------~s~A~y~l~d~~eV~~~L~~ 839 (863)
+++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|++++++..++...|..
T Consensus 312 ~v~p~e~l~VGDs~~Di~aAk~AG~~-----------~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~ 375 (384)
T 1qyi_A 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375 (384)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSC
T ss_pred CCCCcCeEEEcCCHHHHHHHHHcCCE-----------EEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHH
Confidence 37899999999999999999999973 355655542 13688999999998877644
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.26 E-value=0.26 Score=49.13 Aligned_cols=60 Identities=8% Similarity=0.028 Sum_probs=45.0
Q ss_pred hcccceeEecCCccccCCCCCC--------------------CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 589 RTKNRAILLDYDGTIMVPGSIS--------------------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~--------------------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
..+++++++||||||+...... -..-+.+.+.|+++. +. ..++|+|.-+...+..++.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~-~~-~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMG-QL-FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHH-HH-SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHH-cC-CeEEEEcCCCHHHHHHHHH
Confidence 3467899999999999732110 012477888899984 44 9999999999999988886
Q ss_pred cc
Q 002955 649 SC 650 (863)
Q Consensus 649 ~l 650 (863)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=87.85 E-value=0.094 Score=53.23 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=22.5
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
+|+|+||+||||++ ......+...++++++
T Consensus 2 ~k~iiFDlDGTL~d---~~~~~~~~~~~~~~~~ 31 (241)
T 2hoq_A 2 VKVIFFDLDDTLVD---TSKLAEIARKNAIENM 31 (241)
T ss_dssp CCEEEECSBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCC---ChhhHHHHHHHHHHHH
Confidence 68999999999998 4444445566677776
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=87.66 E-value=1.1 Score=53.83 Aligned_cols=175 Identities=13% Similarity=0.115 Sum_probs=101.1
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
|..++....++ .|=-+..+..+.++|++-|+-+ |++...+. .. ++.+.+.+++ +|-. -.-|
T Consensus 522 ~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~----~~~l~~~~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VG----EPNIQQYAQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GG----HHHHHHHHHH----TTCC-GGGE
T ss_pred CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HH----HHHHHHHHHh----cCCC-cCeE
Confidence 44455555555 4446788999999999999876 77666432 11 1222222222 2322 2235
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc----c-Cccc
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV----G-CSPS 488 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~----G-~~~~ 488 (863)
++ .+..+.++..+.|+.+|+|+-|--+-| +.+..||+.++ ++|+|=-+ | ++.+
T Consensus 583 ~f-~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~G--------------------vPvvt~~g~~~~sR~~~s 640 (723)
T 4gyw_A 583 IF-SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAG--------------------TPMVTMPGETLASRVAAS 640 (723)
T ss_dssp EE-EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTT--------------------CCEEBCCCSSGGGTHHHH
T ss_pred EE-CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcC--------------------CCEEEccCCCccHhHHHH
Confidence 44 557899999999999999999998877 67889999983 33333211 1 0001
Q ss_pred C-C--C--ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc---CCHHHHHHHHHHHHHHHHHhh
Q 002955 489 L-S--G--AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST---HDVAYWARSFLQDLERACRDH 552 (863)
Q Consensus 489 l-~--~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~~~ 552 (863)
+ . | -+++ +|.++-.+.-.++-+.+ +.+..-.+++++.+.+ +|...|+++|-..+....+..
T Consensus 641 ~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 641 QLTCLGCLELIA--KNRQEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHTCGGGBC--SSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccccc--CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 0 0 1222 35555444333333333 3333333344444322 688888888877777766554
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=87.63 E-value=0.16 Score=50.94 Aligned_cols=62 Identities=11% Similarity=0.042 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcc-hHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecCCHhHHHHH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRS-DEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDTAEILRM 836 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~d~~eV~~~ 836 (863)
....+.+++++ |+++ ++|||+.+ |+.+.+.+|.. +|.+.. ......+.+++..++.++
T Consensus 153 ~~~~~~~~~~~---~~~~---~~vgD~~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~~~i~~l~el~~~ 213 (220)
T 2zg6_A 153 PKIFGFALAKV---GYPA---VHVGDIYELDYIGAKRSYVD-------------PILLDRYDFYPDVRDRVKNLREALQK 213 (220)
T ss_dssp CCHHHHHHHHH---CSSE---EEEESSCCCCCCCSSSCSEE-------------EEEBCTTSCCTTCCSCBSSHHHHHHH
T ss_pred HHHHHHHHHHc---CCCe---EEEcCCchHhHHHHHHCCCe-------------EEEECCCCCCCCcceEECCHHHHHHH
Confidence 45788888988 9887 99999998 99999988863 343422 111225678899999888
Q ss_pred HHHH
Q 002955 837 LLGL 840 (863)
Q Consensus 837 L~~L 840 (863)
|.++
T Consensus 214 l~~~ 217 (220)
T 2zg6_A 214 IEEM 217 (220)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=87.14 E-value=0.41 Score=49.71 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=34.4
Q ss_pred CH--HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 758 NK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 758 sK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
.| ....+.+++++ |++++++++|||+.+|+...+.+|.
T Consensus 186 ~KP~p~~~~~~~~~l---g~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 HKVESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp CTTCHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHh---CcCcccEEEEcCCHHHHHHHHHCCC
Confidence 56 47778889999 9999999999999999999999997
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=86.97 E-value=1 Score=49.93 Aligned_cols=136 Identities=10% Similarity=0.029 Sum_probs=79.8
Q ss_pred CeEEEeecCcc---cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 335 QIVMLGVDDMD---IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 335 ~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
..++++.|++. ..|.+...++|++.+ +.+ ++++++... .+ . ... + .
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~---~v~~~g~~~----~~---~------------~~~--~--~ 286 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR---VILSRGWTE----LV---L------------PDD--R--D 286 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC---EEEECTTTT----CC---C------------SCC--C--T
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe---EEEEeCCcc----cc---c------------cCC--C--C
Confidence 56888999984 566677777777553 233 223333211 00 0 001 0 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc----cCcc
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV----GCSP 487 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~----G~~~ 487 (863)
.+ .+.+.+++.+ +|..||++|- +-|.| +..|+++|+. |+|+--+. ..+.
T Consensus 287 ~v-~~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~ 339 (416)
T 1rrv_A 287 DC-FAIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-------------------PQLVIPRNTDQPYFAG 339 (416)
T ss_dssp TE-EEESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCCSBTHHHHHH
T ss_pred CE-EEeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-------------------CEEEccCCCCcHHHHH
Confidence 13 4556788655 5699999986 45655 8899999943 45553332 2333
Q ss_pred cC---CCceEeCC--CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 488 SL---SGAIRVNP--WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 488 ~l---~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
.+ ..|+.+++ .+.++++++|.++ +.+ +.+.++++..+.+..
T Consensus 340 ~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 340 RVAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCCC
T ss_pred HHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHhh
Confidence 33 33677754 5789999999999 643 445555555555544
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=86.78 E-value=0.37 Score=47.37 Aligned_cols=59 Identities=7% Similarity=0.013 Sum_probs=44.3
Q ss_pred cccceeEecCCccccCCCCCC--------------------CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSIS--------------------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~--------------------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
.+++++++|+|+||+...... -..-|.+.+.|+++.+ . ..++|+|.-+...+..++..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~-~-~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE-L-FECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH-H-SEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh-C-CCEEEEcCCCHHHHHHHHHH
Confidence 456899999999999732110 0135778888999844 3 99999999999998888865
Q ss_pred c
Q 002955 650 C 650 (863)
Q Consensus 650 l 650 (863)
+
T Consensus 91 l 91 (181)
T 2ght_A 91 L 91 (181)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=86.15 E-value=0.19 Score=50.71 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--c------c-ccceec
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P------S-KAKYYL 827 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~------s-~A~y~l 827 (863)
..|...++.+++ |++++++++|||+.+|+.+++.+.... ..++.|..|.. + . .|++++
T Consensus 146 ~~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG--------~~~i~v~~g~~~~~~~~l~~~~~~~~~i 212 (231)
T 2p11_A 146 IHKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGAR--------LTTVFPRQGHYAFDPKEISSHPPADVTV 212 (231)
T ss_dssp SSGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGG--------EEEEEECCSSSSSCHHHHHHSCCCSEEE
T ss_pred CChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcC--------CeEEEeCCCCCCCcchhccccCCCceee
Confidence 356555555554 578999999999999665555443321 12355666631 1 1 488999
Q ss_pred CCHhHHHHHHHHH
Q 002955 828 DDTAEILRMLLGL 840 (863)
Q Consensus 828 ~d~~eV~~~L~~L 840 (863)
++..++.++|.++
T Consensus 213 ~~~~el~~~l~~~ 225 (231)
T 2p11_A 213 ERIGDLVEMDAEW 225 (231)
T ss_dssp SSGGGGGGCGGGG
T ss_pred cCHHHHHHHHHHH
Confidence 9999887777654
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=85.85 E-value=7.1 Score=42.84 Aligned_cols=138 Identities=11% Similarity=0.033 Sum_probs=80.3
Q ss_pred CCCeEEEeecCcc-cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 KGQIVMLGVDDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 ~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... .. +. ..
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~~---------------~~--~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----RI---------------DE--GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----CS---------------SC--CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----cc---------------cC--CC
Confidence 3467889999998 666666777776553 233 33333221100 00 00 01
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc----c
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----P 487 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~----~ 487 (863)
.| .+.+.+++.+ ++..||++|-.+ |. .+..|+++++. |+|+--+.|-. .
T Consensus 269 ~v-~~~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-------------------P~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 269 DC-LVVGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-------------------PQVVVPQKADQPYYAG 321 (404)
T ss_dssp TE-EEESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHH
T ss_pred CE-EEecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-------------------CEEEcCCcccHHHHHH
Confidence 23 3446788765 456899988543 44 46689999843 45554443321 1
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 488 SL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 488 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
.+ ..|+.+++. +.+++++++.++|+ + +.+.++.+..+.+..
T Consensus 322 ~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 12 236666543 78999999999997 3 445556666666655
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=84.28 E-value=0.21 Score=51.73 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=20.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
+++|+|+||+||||++ ..........++++++
T Consensus 16 ~~~k~viFDlDGTLvd---s~~~~~~a~~~~~~~~ 47 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLID---TAGASRRGMLEVIKLL 47 (260)
T ss_dssp CCCCEEEECCBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCC---CHHHHHHHHHHHHHHH
Confidence 3579999999999998 2222233344455544
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=83.46 E-value=0.2 Score=50.54 Aligned_cols=15 Identities=27% Similarity=0.490 Sum_probs=13.7
Q ss_pred ccceeEecCCccccC
Q 002955 591 KNRAILLDYDGTIMV 605 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~ 605 (863)
++|+|+||+||||++
T Consensus 10 ~~k~viFDlDGTL~d 24 (231)
T 2p11_A 10 HDIVFLFDCDNTLLD 24 (231)
T ss_dssp CSEEEEECCBTTTBC
T ss_pred CCeEEEEcCCCCCEe
Confidence 468999999999998
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=83.23 E-value=0.33 Score=47.73 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=14.4
Q ss_pred cccceeEecCCccccC
Q 002955 590 TKNRAILLDYDGTIMV 605 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~ 605 (863)
+++|+|+||+||||++
T Consensus 3 ~m~k~iiFDlDGTL~d 18 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIH 18 (211)
T ss_dssp CCCSEEEECSBTTTEE
T ss_pred ccceEEEEeCCCeeEe
Confidence 4579999999999998
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=83.08 E-value=0.4 Score=47.88 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=22.3
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
|++|+|+||+||||++ ..........++++++
T Consensus 1 M~~k~viFDlDGTL~d---~~~~~~~~~~~~~~~~ 32 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVG---FKPVFYEKVYQVLKDN 32 (220)
T ss_dssp CCCCEEEECSBTTTEE---EEETTHHHHHHHHHHT
T ss_pred CCceEEEEcCCCceec---ccccHHHHHHHHHHHh
Confidence 4578999999999998 3444444455555554
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=83.02 E-value=0.36 Score=46.74 Aligned_cols=49 Identities=6% Similarity=-0.067 Sum_probs=33.9
Q ss_pred ceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC-CccccceecCCHhHHHHHHHHH
Q 002955 778 DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-KPSKAKYYLDDTAEILRMLLGL 840 (863)
Q Consensus 778 d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~~s~A~y~l~d~~eV~~~L~~L 840 (863)
+.+++|||+.+|+. .++| .++++..+. ....+.+.+++..++..+|+.+
T Consensus 129 ~~~l~ieDs~~~i~--~aaG------------~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 129 LADYLIDDNPKQLE--IFEG------------KSIMFTASHNVYEHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp CCSEEEESCHHHHH--HCSS------------EEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred cccEEecCCcchHH--HhCC------------CeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence 56899999999974 2333 234554432 2345778899999999888765
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=82.54 E-value=0.41 Score=52.97 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 612 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 612 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.+.+.+.++.| ++.|+.|+||||-....++.+...+
T Consensus 221 r~~p~~~eLi~~L-~~~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 221 RTLDEMVDLYRSL-EENGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp EECHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 3679999999998 8899999999999999999988654
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=82.53 E-value=0.92 Score=46.97 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
......+++++ |++|+++++|||+.+|+..-+.+|.
T Consensus 190 p~~~~~a~~~l---g~~p~~~l~vgDs~~di~aA~~aG~ 225 (253)
T 2g80_A 190 TQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGI 225 (253)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCC
Confidence 56778888999 9999999999999999999999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 863 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-120 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 3e-30 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-11 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 1e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-07 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-06 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 4e-06 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-06 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 5e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 8e-06 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 3e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 6e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.004 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 369 bits (947), Expect = e-120
Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 37/488 (7%)
Query: 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 119
R+++V N++ ++ +GG L + + G + ++ G E + E
Sbjct: 2 RLVVVSNRIAPPDEHAA-SAGG---------LAVGIL-GALKAAGGLWFGWSGETGN--E 48
Query: 120 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 179
+ + + + ++Y+ F LWP FHY L L +F R W
Sbjct: 49 DQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWD 103
Query: 180 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 239
Y+ VN + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI
Sbjct: 104 GYLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEI 162
Query: 240 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299
+ LP D LL L + DL+GF T + FL C S + V+ +S + + +G+
Sbjct: 163 FNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFR 219
Query: 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359
++ P+GI ++ P K+A+L+ + K + V+ +D KG+ + LA E
Sbjct: 220 TEVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEA 278
Query: 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419
LL + P GKI QIA +RG + Q+++ + RIN +G+ G+ P+ ++
Sbjct: 279 LLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQH 338
Query: 420 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479
+ + ++ LVT +RDGMNL+ EY+ + A +LV+
Sbjct: 339 FDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--------------ANPGVLVL 384
Query: 480 SEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539
S+F G + L+ A+ VNP++ D VA A+D AL +S AE+ RH + + +D+ +W
Sbjct: 385 SQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 444
Query: 540 SFLQDLER 547
F+ DL++
Sbjct: 445 CFISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 117 bits (293), Expect = 3e-30
Identities = 47/254 (18%), Positives = 92/254 (36%), Gaps = 31/254 (12%)
Query: 595 ILLDYDGTIM--VPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 652
I LDYDGT++ + + +A ++++ +L + ++V+G+ + ++ +
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDIN 60
Query: 653 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN 712
+ HG G S + + G I K A++++
Sbjct: 61 --MICYHGA-CSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 713 FQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 772
D +L +E + V G I+E++ GVNKG + +
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKG--------SAIR 165
Query: 773 KGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAE 832
+ GDD +DE FE A VG+ + AK+++ D E
Sbjct: 166 SVRGERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYIE 213
Query: 833 ILRMLLGLAEASAQ 846
+ ++L + Q
Sbjct: 214 MRKILKFIEMLGVQ 227
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 60.8 bits (146), Expect = 7e-11
Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 21/209 (10%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 652
R +D DG + + ++ E++ V L+SG + ++
Sbjct: 4 RLAAIDVDGNLTDRDRLISTKAIESIR----SAEKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 653 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN 712
LGI +G N G+ ++ S+ F + ++ ++ T +I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 713 FQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 772
++ + G E +D++ + + + +G +K +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKA---FAVNKLKEM 162
Query: 773 KGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801
+ D +L IGD +D MF++ A
Sbjct: 163 YSLEYDEILVIGDSNNDMPMFQLPVRKAC 191
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 57.3 bits (137), Expect = 1e-09
Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWF 647
+ ++ D D T + G + + R + +G+ + L +
Sbjct: 2 RQLLLISDLDNTWV--GDQQALEHLQEYLGD----RRGNFYLAYATGRSYHSARELQKQV 55
Query: 648 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES 707
E G + G+D + + + I + + + S +E
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 708 ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL 767
+ ++ Q E+L + S V++ PQ NKG
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETG----IPVQVIFSSGKDVDLLPQRSNKG---NATQ 168
Query: 768 ETMHQKGMLPDFVLCIGDDRSDEDMFEV 795
M P L GD +D +FE
Sbjct: 169 YLQQHLAMEPSQTLVCGDSGNDIGLFET 196
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 19/211 (9%)
Query: 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650
K +AI +D DGTI P + EA+ + LV+G
Sbjct: 1 KIKAISIDIDGTITYPNRMIHEKALEAIR----RAESLGIPIMLVTGNTVQFAEAASILI 56
Query: 651 EGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV 710
G + + + + K + T+ + + LV
Sbjct: 57 ---GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLV 113
Query: 711 WNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 770
+ + + EL N + + VK +NKG +
Sbjct: 114 IMRETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKG---SGIEKAS 161
Query: 771 HQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801
G+ P V +GD +D D F+V+ A
Sbjct: 162 EFLGIKPKEVAHVGDGENDLDAFKVVGYKVA 192
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 47.6 bits (112), Expect = 3e-06
Identities = 44/240 (18%), Positives = 74/240 (30%), Gaps = 38/240 (15%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD----RDTLAEWFS 648
+ I +D DGT+++P + A+A R V L +G+ + L E
Sbjct: 5 KLIAIDMDGTLLLPDHTISPAVKNAIAAA----RARGVNVVLTTGRPYAGVHNYLKELHM 60
Query: 649 SCEGLGIAAEHG------------YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTET 696
G +G +Y + A LYT
Sbjct: 61 EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTAN 120
Query: 697 TDGSTIETKESAL------VWNFQYADPDF---------GSCQAKELLDHLESVLANEPV 741
D S ES + + DP+ + + + + +
Sbjct: 121 RDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180
Query: 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801
+KS P +E+ + VNKG G+ P+ ++ IGD +D M E A
Sbjct: 181 VLKSAPYFLEILDKRVNKG---TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA 237
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 47.0 bits (110), Expect = 4e-06
Identities = 33/219 (15%), Positives = 57/219 (26%), Gaps = 22/219 (10%)
Query: 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS------ 648
+ D DGT++ S P A + L R+ V L S K +
Sbjct: 7 VFSDLDGTLLDSHSYDWQPAAPWLTRL----REANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 649 ----SCEGLGIAAEHGYFVRPNYGV--------DWETCVSVPDFSWKQIAEPVMKLYTET 696
+ G I + + + ++ + T
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 697 TDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQG 756
T ++ A + A + E + + L + G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795
K A + T Q L +GD +D + EV
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV 221
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 47.2 bits (111), Expect = 4e-06
Identities = 33/234 (14%), Positives = 64/234 (27%), Gaps = 31/234 (13%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 652
+ I+ D DGT + P A + + SG L +F +
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQPRFMAQY---QELKKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 653 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQ------------IAEPVMKLYTETTDGS 700
+ +G S +A + Y
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 701 TIETKESALVWNFQYADP-------------DFGSCQAKELLDHLESVLANEPVSVKSGP 747
+ + + Q ++D L L V SG
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801
+++ G++K A + + + P V+ IGD +D +M ++ + + A
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA 230
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (109), Expect = 5e-06
Identities = 32/230 (13%), Positives = 61/230 (26%), Gaps = 36/230 (15%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS---- 648
L D DGT+ P T + + L K + +V G D + + E
Sbjct: 4 ALCLFDVDGTLTAPRQKITKEMDDFLQKLRQ-----KIKIGVVGGSDFEKVQEQLGNDVV 58
Query: 649 -----SCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIE 703
G+ A + + ++ + K+ G+ IE
Sbjct: 59 EKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIE 118
Query: 704 TKESALVWNFQYADPDFGSCQAK-----------ELLDHLESVLANEPVSVK-SGPNIVE 751
+ L + + + L A + ++ G +
Sbjct: 119 FRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFD 178
Query: 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRS----DEDMFEVIK 797
V P G +K +H + GD D ++F +
Sbjct: 179 VFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPR 222
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 46.1 bits (108), Expect = 8e-06
Identities = 43/300 (14%), Positives = 84/300 (28%), Gaps = 66/300 (22%)
Query: 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 645
A K + +L+D+DGT+ V I E + + + +V + +G+ + +
Sbjct: 4 ALKGADIKLLLIDFDGTLFVDKDIKVPS--ENIDAIKEA-IEKGYMVSICTGRSKVGILS 60
Query: 646 WFSSCEGLGIAAEHGYFVRPNYGV------------------------------------ 669
F + V N +
Sbjct: 61 AFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTI 120
Query: 670 --DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKE 727
E+ D + + + K + DP ++K
Sbjct: 121 FHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPS----ESKT 176
Query: 728 LLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR 787
++ +L+ N+ + EV G +K + L+ + + D VL +GD
Sbjct: 177 VIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN---ISNDQVLVVGDAE 233
Query: 788 SDEDMFE-VIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDT------AEILRMLLGL 840
+D M S A + AK L + A +L+ + L
Sbjct: 234 NDIAMLSNFKYSFAVANATDSAKSH-----------AKCVLPVSHREGAVAYLLKKVFDL 282
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 35/236 (14%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-- 650
R + D DGT++ + + + L K V SG+ +
Sbjct: 3 RVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-----KCYVVFASGRMLVSTLNVEKKYFK 57
Query: 651 EGLGIAAEHGYFV-------RPNYGVDWETCVSVPDFSWKQIAEPVM----KLYTETTDG 699
A +G V N + E + ++ LY+E +
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 700 STIETKESA-----LVWNFQYADPDFGSC---------QAKELLDHLESVLANEPVSVKS 745
+ + N G+ + EL + L + KS
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801
P +E+ P+ V+KG + E M+ + ++ GD+ +D MFE A
Sbjct: 178 FPTYLEIVPKNVDKGKALRFLRERMN---WKKEEIVVFGDNENDLFMFEEAGLRVA 230
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 38/229 (16%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDR---DTLAEWFSS 649
+A+ D DGT++ + + L+ +F+ +G+ + + L+E
Sbjct: 2 KALFFDIDGTLVSFETHRIPS--STIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDR 58
Query: 650 CEGLGIAAEHGYFVRPNYGVDWETCVSVPD----------------------FSWKQIAE 687
G +G + V +++ + + S Q E
Sbjct: 59 NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNE 118
Query: 688 PVMKLYTETTDGSTIETK--ESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 745
V K++ + + I T E A P + KE+L + + +
Sbjct: 119 MVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTC-----EIGRW 173
Query: 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFE 794
P +V +G K + + + + GD +D M
Sbjct: 174 YPAFADVTAKGDTKQKGIDEIIRHFG---IKLEETMSFGDGGNDISMLR 219
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 36/221 (16%), Positives = 53/221 (23%), Gaps = 27/221 (12%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF----- 647
R I LD D T++ P + L +D + S K R +
Sbjct: 3 RLIFLDIDKTLI--PGYEPDPAKPIIEEL----KDMGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 648 ----SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIE 703
S G I GYF G + + + + +K
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 704 TKESALVWNFQYADPDFGSCQAKELLD---------HLESVLANEPVSVKSGPNIVEVKP 754
+ F P+ + E VL V G V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHG 176
Query: 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795
K + +GD +D MFEV
Sbjct: 177 NSDKGKAAKILL---DFYKRLGQIESYAVGDSYNDFPMFEV 214
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 37.6 bits (86), Expect = 0.004
Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 57/252 (22%)
Query: 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 652
+ I +D DGT++ + N A+ + V + +G+ + F
Sbjct: 2 KLIAIDLDGTLLNSKHQVSLENENALRQA----QRDGIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 653 LG-IAAEHGYFVRPNYGVDWETCVSVPDFSWKQIA--------------------EPVMK 691
+ + +G + G + ++ ++ + +
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRE 117
Query: 692 LYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS--------- 742
L D E+ L Q A+ + + E A+EP+
Sbjct: 118 LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177
Query: 743 --------------------VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLC 782
V S + E+ + +KG + Q + +
Sbjct: 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRL---AKQLNIPLEETAA 234
Query: 783 IGDDRSDEDMFE 794
+GD +D+ M E
Sbjct: 235 VGDSLNDKSMLE 246
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.94 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.93 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.92 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.91 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.91 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.91 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.9 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.88 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.87 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.85 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.83 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.81 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.78 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.73 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.58 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.37 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.98 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.94 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.87 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.83 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.78 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.61 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.44 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.36 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.33 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.23 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.22 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.21 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.18 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.11 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.97 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.78 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.69 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.67 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.6 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.54 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.4 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.4 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.29 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.16 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.15 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.38 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 95.66 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.59 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 95.42 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.34 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.21 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.27 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.71 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.67 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.04 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 91.73 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 90.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 89.89 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.71 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 87.61 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 87.45 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 84.87 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 83.72 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 80.69 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.1e-100 Score=873.69 Aligned_cols=453 Identities=30% Similarity=0.572 Sum_probs=417.9
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeC
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 138 (863)
+||||||||+|+..++.. ++|||+++|.+.+. +.+++||||+|.+.++.+ .+......+|+|+||+|
T Consensus 1 srlivvsnr~~~~~~~~~----------~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l 67 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHAA----------SAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNL 67 (456)
T ss_dssp CCEEEEEEECCCCC--------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEE
T ss_pred CCEEEEECCCCCCCCCCC----------CCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecC
Confidence 489999999999765432 46899999987654 579999999997654322 23333467899999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
+++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||
T Consensus 68 ~~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR 141 (456)
T d1uqta_ 68 SEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELR 141 (456)
T ss_dssp CHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHH
Confidence 999999999999999999999999876 4899999999999999999999999997 5999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.|+++||||+|+|||++++|+++|++++|+++||++|+|||||++|++||++||.+++++...... .+.+.|+.+
T Consensus 142 ~~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v 218 (456)
T d1uqta_ 142 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAF 218 (456)
T ss_dssp HTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEE
T ss_pred HhCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998876554 478899999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
++.++|+|||+..|......+ ..+.+.+++++++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.
T Consensus 219 ~v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~ 297 (456)
T d1uqta_ 219 RTEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 297 (456)
T ss_dssp EEEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECC
T ss_pred eeeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcC
Confidence 999999999999998765544 4456778889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|++++.++|.+++.++.+++++||++|+..+|.|++++.+.++++++.++|+.||||++||++||||||++|||||+.+
T Consensus 298 ~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p- 376 (456)
T d1uqta_ 298 TSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 376 (456)
T ss_dssp BCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT-
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+
T Consensus 377 -------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~ 443 (456)
T d1uqta_ 377 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 443 (456)
T ss_dssp -------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred -------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 2478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002955 539 RSFLQDLERA 548 (863)
Q Consensus 539 ~~~l~~l~~~ 548 (863)
++||.+|+++
T Consensus 444 ~~fl~~l~~~ 453 (456)
T d1uqta_ 444 ECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhh
Confidence 9999999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=1.5e-29 Score=259.46 Aligned_cols=222 Identities=21% Similarity=0.303 Sum_probs=179.4
Q ss_pred eeEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeE
Q 002955 594 AILLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDW 671 (863)
Q Consensus 594 lI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w 671 (863)
||+||+||||++... ..+.++++++++|++| ++ ++.|+|+|||+...+...+. +..+++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l-~~-~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KE-RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HH-HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHH-hh-CCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 899999999997432 3567999999999999 43 67899999999999988764 456889999999988876544
Q ss_pred EeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEE
Q 002955 672 ETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVE 751 (863)
Q Consensus 672 ~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vE 751 (863)
.. .......|.+.+.+.+..+....++.....+.....+++....+.. ..+..+.++..+....+.+.++..++|
T Consensus 78 ~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 NN-GSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADM----KPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp CT-TGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTT----HHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred ec-chhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhh----HHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 32 2223345666666666667777889999999999999887664433 344556666666666788999999999
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHh
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~ 831 (863)
|.|+|+|||.|+++|+++ ++++|||||.||++||+.++.+ |+|++|+++++|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999753 6799999999999999999875 78999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 002955 832 EILRMLLGLAEAS 844 (863)
Q Consensus 832 eV~~~L~~L~~~~ 844 (863)
||.++|+.|....
T Consensus 213 ev~~~l~~l~~~~ 225 (229)
T d1u02a_ 213 EMRKILKFIEMLG 225 (229)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988888876543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=3.7e-26 Score=241.22 Aligned_cols=226 Identities=19% Similarity=0.277 Sum_probs=164.5
Q ss_pred cceeEecCCccccCCCCCCCCC-CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-CCceEEccCcEEEEeCCce
Q 002955 592 NRAILLDYDGTIMVPGSISTSP-NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-EGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~-s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~~l~liaenGa~I~~~~~~ 669 (863)
+|+|+||+||||++ +.+.+ +++++++|++| ++.|+.|+++|||+...+.+++.++ ...+++++||+.|..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 79999999999998 45555 47899999998 6779999999999999999999877 3568999999999997765
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhc---------CCCceeeeccce------------e--EeecccCCCC-------
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTET---------TDGSTIETKESA------------L--VWNFQYADPD------- 719 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~---------~~gs~ie~k~~~------------l--~~~y~~~d~~------- 719 (863)
.+..... .+.....+..+... .++.++...... + ...+...+..
T Consensus 78 ~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEeccc------hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 5443221 11222222222221 112222111000 0 0011111111
Q ss_pred cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 720 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 720 ~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
....+..++.+++...+......+.++..++||+|+++|||.|+++|++++ |+++++|++||||.||++||+.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~- 227 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY- 227 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCCe-
Confidence 123456677788877776666778889999999999999999999999999 9999999999999999999999986
Q ss_pred cCCCCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHHHHhh
Q 002955 800 AAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEAS 844 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~~ 844 (863)
+|+||+. +..|+|++.+ .++|++.|++|.+..
T Consensus 228 -------------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 228 -------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp -------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred -------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 4666653 5889999864 677999999998754
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=4.7e-26 Score=240.51 Aligned_cols=228 Identities=16% Similarity=0.232 Sum_probs=156.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc----CCceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC----EGLGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l----~~l~liaenGa~I~~ 665 (863)
|.+|||+||+||||++ .++.+++++.++|++| ++.|+.|++||||+...+.+++..+ +..+++++||+.+..
T Consensus 2 ~~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~ 77 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 77 (271)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred CCeeEEEEeCCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEec
Confidence 6799999999999998 6788999999999999 7779999999999999999988775 345689999999986
Q ss_pred CCce--eEEeecCCCCccHHHHHHHHHHHHhhc-----CCCceeeeccce-------------eEe-ecccCCCC--c--
Q 002955 666 NYGV--DWETCVSVPDFSWKQIAEPVMKLYTET-----TDGSTIETKESA-------------LVW-NFQYADPD--F-- 720 (863)
Q Consensus 666 ~~~~--~w~~~~~~~~~~w~~~v~~i~~~y~~~-----~~gs~ie~k~~~-------------l~~-~y~~~d~~--~-- 720 (863)
.... .+.... .......+..+.+.+... ..+.+...+... ... .....++. +
T Consensus 78 ~~~~~~i~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T d1rkqa_ 78 AADGSTVAQTAL---SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLK 154 (271)
T ss_dssp TTTCCEEEECCB---CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCE
T ss_pred cCCCeEEEeecc---cHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEE
Confidence 5433 222221 222222222222222110 011111111000 000 00000110 0
Q ss_pred -----chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 721 -----GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 721 -----~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
.....++.++.+.+.+.+....+..++.++||.|+++|||.|+++|++++ +++++++++|||+.||++||+.
T Consensus 155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~ 231 (271)
T d1rkqa_ 155 VMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEY 231 (271)
T ss_dssp EEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHH
T ss_pred EEEecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHHh
Confidence 11233444555555554444567789999999999999999999999999 9999999999999999999999
Q ss_pred hhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 796 IKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 796 ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
+++ +++||+. +..|+|++. +.++|.+.|+++.
T Consensus 232 ~~~--------------~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 232 AGV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp SSE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred CCc--------------EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 997 4566654 478899885 4577999998864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=2.3e-25 Score=235.36 Aligned_cols=225 Identities=16% Similarity=0.139 Sum_probs=159.8
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CCceEEccCcEEEEeCCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~l~liaenGa~I~~~~~ 668 (863)
++|+|+||+||||++ .++.++++++++|++| ++ ++.++++|||++..+.+.+..+ ...+++++||+.|..+++
T Consensus 1 m~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CeEEEEEeCCccccC---CcCccCHHHHHHHHHH-Hc-CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEeccc
Confidence 479999999999998 6788999999999998 54 5579999999999988888764 345789999999988765
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhcCC--------CceeeeccceeEeecccC------CCCc--------------
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTETTD--------GSTIETKESALVWNFQYA------DPDF-------------- 720 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~--------gs~ie~k~~~l~~~y~~~------d~~~-------------- 720 (863)
...... ..+. +.+..+.+...+... +.+.......+..+.+.. .+.+
T Consensus 76 ~~i~~~--~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 150 (267)
T d1nf2a_ 76 GVILNE--KIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLL 150 (267)
T ss_dssp EEEEEC--CBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEE
T ss_pred cccccc--CCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEE
Confidence 543321 1122 233334333332211 111111000000000000 0000
Q ss_pred --chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 721 --GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 721 --~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
...+.+++.+.+.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~~ 227 (267)
T d1nf2a_ 151 IDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAGL 227 (267)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCSE
T ss_pred eccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCCc
Confidence 12345666777777776666667889999999999999999999999999 9999999999999999999999986
Q ss_pred hcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHHH
Q 002955 799 AAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLAE 842 (863)
Q Consensus 799 ~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~ 842 (863)
+|+||+. +..|+|++. +.++|+++|++|..
T Consensus 228 --------------sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 228 --------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp --------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred --------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 5667764 578999986 56789999988753
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.2e-24 Score=231.25 Aligned_cols=223 Identities=18% Similarity=0.188 Sum_probs=150.5
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~ 670 (863)
+|+|+||+||||++ .++.++++++++|++| +++|+.|+++|||+...+.+++..+. ..+++++||+.+...++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999998 6788999999999998 77899999999999999999998873 5679999999999865554
Q ss_pred EEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccc-----------------------------------------ee
Q 002955 671 WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES-----------------------------------------AL 709 (863)
Q Consensus 671 w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~-----------------------------------------~l 709 (863)
+.... .+ .+.+.++++.+........+..... ..
T Consensus 77 i~~~~--i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T d1nrwa_ 77 YHHET--ID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGF 151 (285)
T ss_dssp EEECC--CC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCE
T ss_pred eeecc--CC---HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccc
Confidence 43221 11 1222333332222110000000000 00
Q ss_pred --Eeeccc---C-CCC-c-----chhhHHHHHHHHHHHhcCCCe-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCC
Q 002955 710 --VWNFQY---A-DPD-F-----GSCQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML 776 (863)
Q Consensus 710 --~~~y~~---~-d~~-~-----~~~~a~el~~~L~~~l~~~~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~ 776 (863)
...+.. . ++. . .......+...+........+ .+.++..++||+|+++|||.|++++++++ |++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi~ 228 (285)
T d1nrwa_ 152 AYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NIP 228 (285)
T ss_dssp EECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TCC
T ss_pred eeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---ccC
Confidence 000000 0 000 0 000111222222222222233 45678899999999999999999999999 999
Q ss_pred cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHH
Q 002955 777 PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGL 840 (863)
Q Consensus 777 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L 840 (863)
++++++|||+.||++||+.++. +|+|++. +..|+|++. +.++|+++|++|
T Consensus 229 ~~~vi~~GD~~ND~~Ml~~a~~--------------svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 229 LEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp GGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred cccEEEEeCCHHHHHHHHhCCe--------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 9999999999999999999986 4566654 578899886 467899999876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.91 E-value=2.3e-24 Score=226.75 Aligned_cols=221 Identities=13% Similarity=0.172 Sum_probs=146.2
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh--cc-CCceEEccCcEEEEeCCce
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS--SC-EGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~--~l-~~l~liaenGa~I~~~~~~ 669 (863)
|+||||+||||++. ..+.++++++++|++| ++.|+.|++||||+...+..+.. .+ ...+++++||+.++.++..
T Consensus 2 k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~~ 78 (260)
T d2rbka1 2 KALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEV 78 (260)
T ss_dssp CEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEE
T ss_pred eEEEEECCCCCcCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCccc
Confidence 89999999999983 3567999999999998 88899999999999886654322 22 3457899999999998766
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCcee-eeccceeEe----------ecccC--CCCcch-------------h
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTI-ETKESALVW----------NFQYA--DPDFGS-------------C 723 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~i-e~k~~~l~~----------~y~~~--d~~~~~-------------~ 723 (863)
.+...++ .+ .++.+.+...+......+ ......... .+... .+.... .
T Consensus 79 i~~~~l~---~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
T d2rbka1 79 IYKSAIP---QE---EVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPF 152 (260)
T ss_dssp EEECCCC---HH---HHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEEC
T ss_pred ccccCCC---HH---HHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeec
Confidence 6665432 22 222333322221111111 111100000 00000 000000 0
Q ss_pred hHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCC
Q 002955 724 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~ 803 (863)
...+....+.+.+.. .....++..++||.|+++|||.|+++|++++ |++++++++||||.||++||+.+++
T Consensus 153 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~----- 223 (260)
T d2rbka1 153 ITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI----- 223 (260)
T ss_dssp CCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE-----
T ss_pred CCHHHHHHHHHHhcc-ccceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCCe-----
Confidence 001111222222221 2344457889999999999999999999999 9999999999999999999999987
Q ss_pred CCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHHHHH
Q 002955 804 SLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 840 (863)
Q Consensus 804 ~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L~~L 840 (863)
+|+||+. +..|+|++.+ .++|+++|+++
T Consensus 224 ---------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~ 257 (260)
T d2rbka1 224 ---------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 257 (260)
T ss_dssp ---------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred ---------EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence 4666764 5788998764 67899999876
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.91 E-value=4e-24 Score=226.20 Aligned_cols=235 Identities=18% Similarity=0.209 Sum_probs=163.8
Q ss_pred HHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-------CCceEE
Q 002955 584 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-------EGLGIA 656 (863)
Q Consensus 584 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-------~~l~li 656 (863)
.++++.+++|+|+||+||||+.. .++.++++++++|++| +++|+.|+|+|||++..+...+..+ .....+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 46778889999999999999852 4678999999999999 7789999999999999998887653 133467
Q ss_pred ccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCC--CceeeeccceeE---------------------eec
Q 002955 657 AEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTD--GSTIETKESALV---------------------WNF 713 (863)
Q Consensus 657 aenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~--gs~ie~k~~~l~---------------------~~y 713 (863)
+.||+.++.......... ..+. .....+++.+..... ..++...+.... ...
T Consensus 79 ~~~g~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDE--TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH 153 (283)
T ss_dssp EGGGTEEECTTCCEEEEC--CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH
T ss_pred EEeeeEEEcCCCcEeeec--ccCH---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccH
Confidence 889999887655433221 1121 122223222221110 111111110000 000
Q ss_pred ccC-C-CC-------cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEe
Q 002955 714 QYA-D-PD-------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIG 784 (863)
Q Consensus 714 ~~~-d-~~-------~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiG 784 (863)
.+. + .. ....+.+++.+.+.+.+......+.++..++||.|+++|||.+++++++++ +++.+++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~G 230 (283)
T d2b30a1 154 NEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVG 230 (283)
T ss_dssp HHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEE
T ss_pred HHHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEec
Confidence 000 0 00 012446677788888777666677788999999999999999999999999 99999999999
Q ss_pred CCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCC---HhHHHHHHHHHHHh
Q 002955 785 DDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD---TAEILRMLLGLAEA 843 (863)
Q Consensus 785 D~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d---~~eV~~~L~~L~~~ 843 (863)
||.||++||+.+++ +|+||+. +..|+|++.. .++|.++|+++.+.
T Consensus 231 D~~ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 231 DAENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp CSGGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CChhhHHHHHhCCc--------------EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 99999999999986 4566654 5778998853 34589999998753
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=1.3e-23 Score=215.07 Aligned_cols=218 Identities=20% Similarity=0.227 Sum_probs=154.3
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-CCceEEccCcEEEEeCCce
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-EGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~~l~liaenGa~I~~~~~~ 669 (863)
|+|+|+||+||||++ ....++++++++|++| ++.|+.|+++|||+...+...+..+ .+..++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999998 6888999999999998 7789999999999999998887655 3567899999999887655
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcE
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 749 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 749 (863)
.+... ....+. ....+...+...........+...+.+. .. .......+++.++ + ........+...
T Consensus 77 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLAS---MDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIM-RE---TINVETVREIINE----L-NLNLVAVDSGFA 143 (230)
T ss_dssp EESCC---CSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEEC-TT---TSCHHHHHHHHHH----T-TCSCEEEECSSC
T ss_pred ccccc---ccHHHH-HHHHHHHhcccccceeecccceeeEEEe-cc---cccHHHHHHHHHH----h-ccceEEeeCCcE
Confidence 43221 122221 2223333333221111112222222221 11 1111222333322 2 223566778899
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY 825 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y 825 (863)
+||+|.+++|+.+++++++++ |++++++++|||+.||++||+.++. +|+||+. +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag~--------------~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCCe--------------EEEECCCCHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999986 5667764 577999
Q ss_pred ecCC--HhHHHHHHHHHHH
Q 002955 826 YLDD--TAEILRMLLGLAE 842 (863)
Q Consensus 826 ~l~d--~~eV~~~L~~L~~ 842 (863)
++++ .++|++.|..+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHH
Confidence 9864 5678888887764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=3.2e-23 Score=212.97 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=153.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-CCceEEccCcEEEEeCCce
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-EGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~~l~liaenGa~I~~~~~~ 669 (863)
++|+|+||+||||++ ....+++++.++|++| ++.|+.|+++|||+...+..+...+ ....++++||+.+..+...
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 579999999999998 7889999999999998 7789999999999998877776554 2467889999999888766
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceee-eccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCc
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIE-TKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPN 748 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie-~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 748 (863)
.+..... +....+.+.......-..+. .+.....+.+ .....+ .+.+...+......+..+..
T Consensus 78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKFFSN-------EGTNKFLEEMSKRTSMRSILTNRWREASTGF-----DIDPED----VDYVRKEAESRGFVIFYSGY 141 (225)
T ss_dssp EEESSCS-------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEE-----BCCGGG----HHHHHHHHHTTTEEEEEETT
T ss_pred EEEecCh-------HHHHHHHHHHHHhcCcceeecccceeeeecc-----ccCHHH----HHHHHHHHhhcCcEEEECCc
Confidence 5543211 12223333333221110000 0000001111 111112 23334444455678888899
Q ss_pred EEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccc
Q 002955 749 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAK 824 (863)
Q Consensus 749 ~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~ 824 (863)
.+||.|++++||.++++|++++ |+++++|++||||.||++||+.++. +|+||+. ++.|+
T Consensus 142 ~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~~--------------~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 142 SWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAVSD 204 (225)
T ss_dssp EEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHHCS
T ss_pred EEEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCCe--------------EEEECCCcHHHHHhCC
Confidence 9999999999999999999999 9999999999999999999999985 5667653 47899
Q ss_pred eecC--CHhHHHHHHHHH
Q 002955 825 YYLD--DTAEILRMLLGL 840 (863)
Q Consensus 825 y~l~--d~~eV~~~L~~L 840 (863)
|++. +.++|++.|+.+
T Consensus 205 ~v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 205 FVSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp EECSCCTTHHHHHHHHHT
T ss_pred EEECCCCcCHHHHHHHHh
Confidence 9884 568899999875
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=3.4e-22 Score=228.58 Aligned_cols=316 Identities=14% Similarity=0.147 Sum_probs=211.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhc---CCCCCEEEEeCcccchHHHHHH-hhCCCCeEEEEEeCCCC----ChhHhhcCC---
Q 002955 176 SLWQAYVSVNKIFADKVMEVI---SPDDDFVWVHDYHLMVLPTFLR-KRFNRVKLGFFLHSPFP----SSEIYRTLP--- 244 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~---~p~~D~VwvhDyhl~llp~~lr-~~~~~~~i~~flH~PfP----~~e~~r~lp--- 244 (863)
..|..|...++.+++.+.+.. +| |+|++||+|..+.+.+++ .+.+++++.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCC--CEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 468889888888887665543 34 999999999999999886 45678999999996421 111221111
Q ss_pred ------------ChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHH
Q 002955 245 ------------IRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 312 (863)
Q Consensus 245 ------------~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~ 312 (863)
...-+..++..+|.+-.-+..|++..+..-. ..+.+.- ...+..++.++|+|+|.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhc
Confidence 0112345677899998888888776643211 0111100 01122356778999998877
Q ss_pred HhhcCC-----------chHHHHHHHHHHHh----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEe
Q 002955 313 QSVLNL-----------PETEAKVAELQDQF----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 377 (863)
Q Consensus 313 ~~~~~~-----------~~~~~~~~~l~~~~----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 377 (863)
.+.... .......+.++.++ +++++|+++||+++.||+..+++|+++++++++. |+.+|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEE
T ss_pred cccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEe
Confidence 532110 01122333444444 3467999999999999999999999999887543 55566
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecC
Q 002955 378 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 378 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
.. +. ....++.++..+.+.+ + .+.+..+.+++..+|+.||+||+||.+||||+|++|||+|
T Consensus 328 ~G---~~----~~~~~~~~~~~~~~~~--------v-~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~--- 388 (477)
T d1rzua_ 328 AG---DV----ALEGALLAAASRHHGR--------V-GVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--- 388 (477)
T ss_dssp CB---CH----HHHHHHHHHHHHTTTT--------E-EEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---
T ss_pred cC---Cc----hHHHHHHHHHhhcCCe--------E-EEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc---
Confidence 32 22 2233333444444322 3 3445678889999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCccEEecccccCcccCC------------CceEeCCCCHHHHHHHHHHHhCC--CHHHHHHHHH
Q 002955 458 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHE 523 (863)
Q Consensus 458 ~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~ 523 (863)
|.|+|+|..+|..+.+. .|++|+|.|++++|+||.++|+. .++.++...+
T Consensus 389 ----------------G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 452 (477)
T d1rzua_ 389 ----------------GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452 (477)
T ss_dssp ----------------TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----------------CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHH
Confidence 67899999999998772 47999999999999999999863 2232222222
Q ss_pred HHhhhhccCCHHHHHHHHHHHHH
Q 002955 524 KHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 524 ~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
+.. -..+++..-++++++--+
T Consensus 453 ~a~--~~~fsw~~~a~~~~~lY~ 473 (477)
T d1rzua_ 453 LGM--KSDVSWEKSAGLYAALYS 473 (477)
T ss_dssp HHH--TCCCBHHHHHHHHHHHHH
T ss_pred HHH--HhhCCHHHHHHHHHHHHH
Confidence 221 134777777777655433
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.88 E-value=2e-22 Score=225.86 Aligned_cols=290 Identities=16% Similarity=0.165 Sum_probs=211.0
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCCh---hHhhc------C--CChHHHHHHHHhCCEecccCHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT------L--PIRDELLRALLNADLIGFHTFDYAR 268 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~------l--p~r~eil~~ll~~dligF~t~~~~~ 268 (863)
.|+|++|+++..+++.++++.. ++++.+.+|..++.. ..+.. . +.......+...+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~~-~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHHH-CCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhccc-cCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 3999999999888877776654 799999999887642 11111 1 1122234456678888877766554
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCccc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDI 346 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~ 346 (863)
.... .++. ...++.++|+|+|++.|......+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~---------------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGG---------------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhcc---------------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 1111 0113567899999998876655555555566677766 46789999999975
Q ss_pred -ccCHHHHHHHHHHHHHh--CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002955 347 -FKGISLKLLAMEQLLSQ--NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 423 (863)
Q Consensus 347 -~KGi~~~l~A~~~ll~~--~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~ 423 (863)
.||+..+++|++.+..+ +|+++ |+.+|... +.++... +.+.. .. ..++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~~~----lvi~G~~~----~~~~~~~---~~~~~----~~-----~~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKGD----PELEGWA---RSLEE----KH-----GNVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGGEE----EEEECCBC----HHHHHHH---HHHHH----TC-----TTEEEECSCCCHH
T ss_pred cchhHHHHHhhhcccccccccccce----eeeecccc----cccccch---hhhcc----cc-----ccceeccccCcHH
Confidence 79999999999988654 35544 88887321 2222222 22211 11 2356788899999
Q ss_pred HHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHH
Q 002955 424 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNID 501 (863)
Q Consensus 424 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~ 501 (863)
++..+|+.||++++||..||+|++++|||+| |.|+|+|..+|..+.+. .|++|+|.|++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-------------------G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~ 381 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIPIASAVGGLRDIITNETGILVKAGDPG 381 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-------------------TCEEEEESCTTHHHHCCTTTCEEECTTCHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHC-------------------CCCEEEeCCCCcHHhEECCcEEEECCCCHH
Confidence 9999999999999999999999999999999 56789999888887663 48999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
++|++|.++|+++++.++...++.+++++.+++..+++++++-.+++
T Consensus 382 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 382 ELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999998766666666777777788899999999888765543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.87 E-value=9.5e-23 Score=211.85 Aligned_cols=212 Identities=16% Similarity=0.176 Sum_probs=140.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEEeC
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPN 666 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~~~ 666 (863)
|++.||++|+||||++ ..+. .+.++++.++ +++|+.|+++|||+...+.+++..+. .-.++++||+.+...
T Consensus 1 m~~~li~~DlDGTL~~---~~~~--~~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~ 74 (244)
T d1s2oa1 1 MRQLLLISDLDNTWVG---DQQA--LEHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHP 74 (244)
T ss_dssp CCSEEEEECTBTTTBS---CHHH--HHHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEET
T ss_pred CCceEEEEECcccCCC---CCCC--HHHHHHHHHH-HcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEc
Confidence 5677999999999998 3333 3556677776 77899999999999999999987652 245789999999877
Q ss_pred CceeEEeecCCCCccHHHHH-----HHHHHHHhhcCCCceee----eccceeEeecccCCCCcchhhHHHHHHHHHHHhc
Q 002955 667 YGVDWETCVSVPDFSWKQIA-----EPVMKLYTETTDGSTIE----TKESALVWNFQYADPDFGSCQAKELLDHLESVLA 737 (863)
Q Consensus 667 ~~~~w~~~~~~~~~~w~~~v-----~~i~~~y~~~~~gs~ie----~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~ 737 (863)
.... ..|.+.+ ......+.+..++.... .....+.+.+..... . +..+.+...+.
T Consensus 75 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~ 138 (244)
T d1s2oa1 75 EGLD---------QHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQAC---P----TVIDQLTEMLK 138 (244)
T ss_dssp TEEC---------HHHHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSC---T----HHHHHHHHHHH
T ss_pred cCcc---------hHHHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEecccccc---H----HHHHHHHHHHH
Confidence 5431 1121111 11222233333332222 222333333322211 1 22333333332
Q ss_pred C---CCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEE
Q 002955 738 N---EPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFAC 814 (863)
Q Consensus 738 ~---~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av 814 (863)
. .......+...+||.|++++||.|+++|++++ |++.+++++||||.||++||+.+++ +|
T Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~~--------------~v 201 (244)
T d1s2oa1 139 ETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GV 201 (244)
T ss_dssp TSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EE
T ss_pred hhcccceeeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCCc--------------EE
Confidence 2 22455678899999999999999999999999 9999999999999999999999986 56
Q ss_pred EeCCC----ccccc-------eecC--CHhHHHHHHHHH
Q 002955 815 TVGQK----PSKAK-------YYLD--DTAEILRMLLGL 840 (863)
Q Consensus 815 ~vG~~----~s~A~-------y~l~--d~~eV~~~L~~L 840 (863)
+||+. +..|+ |... ..++|++.|+.+
T Consensus 202 av~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 202 IVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp ECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred EeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 77763 24444 4432 356788887764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.87 E-value=8.8e-23 Score=210.74 Aligned_cols=218 Identities=20% Similarity=0.175 Sum_probs=136.2
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCce
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~ 669 (863)
++|+||+|+||||++ ... +++++++|++| ++.|+.|++||||++..+..++..++ ...++++||+.+...++.
T Consensus 1 miKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 1 MIRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp CEEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred CcEEEEEeCCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCc
Confidence 479999999999997 332 57789999998 88899999999999999999998873 457899999999887654
Q ss_pred eEEeecCCC---------CccHHHHHHHHHH----HHhhcCCCceeeeccceeEeecccCCC---------CcchhhHHH
Q 002955 670 DWETCVSVP---------DFSWKQIAEPVMK----LYTETTDGSTIETKESALVWNFQYADP---------DFGSCQAKE 727 (863)
Q Consensus 670 ~w~~~~~~~---------~~~w~~~v~~i~~----~y~~~~~gs~ie~k~~~l~~~y~~~d~---------~~~~~~a~e 727 (863)
......... .... +.+...+. .|... ......... ...+....+ .+.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (243)
T d1wzca1 75 FPFDVKGKEVGNYIVIELGIRV-EKIREELKKLENIYGLK-YYGNSTKEE---IEKFTGMPPELVPLAMEREYSETIFEW 149 (243)
T ss_dssp CC----------CEEEECSCCH-HHHHHHHHHHHHHHTCB-CGGGSCHHH---HHHHHCCCGGGHHHHTCCSSEEEECBC
T ss_pred eecccchhHHHHHHHHHHhhhH-HHHHHHHHhhhhhcccc-hhhhhhHHH---HHHhhcCchhHHHHHHhhhcchhhhhh
Confidence 221110000 0011 11111111 11110 000000000 000000000 000000000
Q ss_pred HHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcC-CCcceEEEEeCCcchHHHHHHhhhhcCCCCCC
Q 002955 728 LLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKG-MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLS 806 (863)
Q Consensus 728 l~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~g-i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~ 806 (863)
....+.+........+..+ ..+++.|++++|+.|++++++++ + +++++++||||+.||++||+.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~---~~~~~~~~~a~GD~~ND~~Ml~~a~~-------- 217 (243)
T d1wzca1 150 SRDGWEEVLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVVDK-------- 217 (243)
T ss_dssp SSSCHHHHHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTSSE--------
T ss_pred hhHHHHHhhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHh---cCCCcccEEEEcCCHhHHHHHHcCCc--------
Confidence 0001111122233444444 45789999999999999999988 5 788999999999999999999986
Q ss_pred CCcceEEEEeCCCccccceecCCHhHHHHHH
Q 002955 807 PVAEVFACTVGQKPSKAKYYLDDTAEILRML 837 (863)
Q Consensus 807 ~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L 837 (863)
+|+||+....++-.+++..|+++++
T Consensus 218 ------~va~~Na~~~~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 218 ------VFIVGSLKHKKAQNVSSIIDVLEVI 242 (243)
T ss_dssp ------EEEESSCCCTTCEEESCHHHHHHHH
T ss_pred ------EEEeCCCChHHHhhhhHHHHHHHhh
Confidence 6778888777777888888888775
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=3.3e-22 Score=204.49 Aligned_cols=202 Identities=18% Similarity=0.134 Sum_probs=127.1
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CCceEEccCcEEEEeCCcee
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~l~liaenGa~I~~~~~~~ 670 (863)
.|||+|+||||++ .++.++++++++|++| ++.|+.|+++|||+...+.+.+..+ ....++++||+.|.......
T Consensus 5 ~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 80 (232)
T d1xvia_ 5 LLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQ 80 (232)
T ss_dssp EEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCT
T ss_pred EEEEEECCCCccC---CcCcCCHHHHHHHHHH-HHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCcc
Confidence 4899999999998 6778999999999998 8889999999999999999999876 35679999999998765421
Q ss_pred EEe----ecCCCCccHHHHHHHHHHHHhhcCCCceeeec---cceeEeec----------ccCCCCcchhhHHHHHHHHH
Q 002955 671 WET----CVSVPDFSWKQIAEPVMKLYTETTDGSTIETK---ESALVWNF----------QYADPDFGSCQAKELLDHLE 733 (863)
Q Consensus 671 w~~----~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k---~~~l~~~y----------~~~d~~~~~~~a~el~~~L~ 733 (863)
... ........+............ .......... ......++ .............+....+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (232)
T d1xvia_ 81 EIDGFPRIISGISHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFT 159 (232)
T ss_dssp TSTTTTEEECSSCHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHH
T ss_pred ccchhhhhhhHHHHHHHHHhhhhhhhhh-ccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHHHH
Confidence 110 000111111111111111110 0000000000 00000000 00000000000111222333
Q ss_pred HHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 734 SVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 734 ~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.........+..+..++++.|.+++||.|+++|++.+...|++++++++||||.||++||+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~ 225 (232)
T d1xvia_ 160 ARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA 225 (232)
T ss_dssp HHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE
T ss_pred HHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeE
Confidence 333344566777888999999999999999999987644589999999999999999999999975
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.1e-20 Score=193.94 Aligned_cols=215 Identities=15% Similarity=0.097 Sum_probs=133.9
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc---CCceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC---EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l---~~l~liaenGa~I~~~~~ 668 (863)
.||++||+||||++ +++.++++++++|++| ++.| .++++|||....+...+... ....++..+|+++...+.
T Consensus 3 ~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T d2amya1 3 PALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGK 77 (243)
T ss_dssp SEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTE
T ss_pred CEEEEEcCcCCeeC---CCCcCCHHHHHHHHHH-HcCC-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCCc
Confidence 68999999999999 6889999999999998 6666 58899999998888777553 234555667878777776
Q ss_pred eeEEeecCCCCc-cHHHH-HHHHHHHHhhcCCC----ceeeeccceeEeecccCCCCcc-----------hhhHHHHHHH
Q 002955 669 VDWETCVSVPDF-SWKQI-AEPVMKLYTETTDG----STIETKESALVWNFQYADPDFG-----------SCQAKELLDH 731 (863)
Q Consensus 669 ~~w~~~~~~~~~-~w~~~-v~~i~~~y~~~~~g----s~ie~k~~~l~~~y~~~d~~~~-----------~~~a~el~~~ 731 (863)
..+......... ..... .......+...... ...+.......+.......... .....+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (243)
T d2amya1 78 LLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVAD 157 (243)
T ss_dssp EEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHHH
Confidence 665543221111 11111 11111111111111 1111111111111111111100 0122334455
Q ss_pred HHHHhcCCCe-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhcCCCCCC
Q 002955 732 LESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSLS 806 (863)
Q Consensus 732 L~~~l~~~~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~ 806 (863)
+.+.+..... ...++..++||.|+++|||+|+++|+ +++++++++||| |.||++||+.+|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~------- 224 (243)
T d2amya1 158 LRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRTM------- 224 (243)
T ss_dssp HHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTEE-------
T ss_pred HHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCCc-------
Confidence 5555544444 55678899999999999999999884 678899999999 77999999999842
Q ss_pred CCcceEEEEeCCCccccceecCCHhHHHHHHHHHH
Q 002955 807 PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 807 ~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
++ .+++++++.+.++.|+
T Consensus 225 ------~~-----------~v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 225 ------GY-----------SVTAPEDTRRICELLF 242 (243)
T ss_dssp ------EE-----------ECSSHHHHHHHHHHHC
T ss_pred ------EE-----------EeCCHHHHHHHHHHHh
Confidence 33 2567888888888775
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.81 E-value=1.2e-19 Score=182.33 Aligned_cols=188 Identities=15% Similarity=0.161 Sum_probs=145.3
Q ss_pred ccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCcc-cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC
Q 002955 306 GIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 382 (863)
Q Consensus 306 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 382 (863)
|||.+.|.+........+..+.++++| +++++|++|||++ +.||+..+++|++.|.++.+. .++.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999987665566677788888887 6788999999997 589999999999999754321 13558888732
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccc
Q 002955 383 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLD 462 (863)
Q Consensus 383 ~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~ 462 (863)
.+.++. .+..+...+ .-++++.+.++.+++..+|+.||++|+||..||+|++.+|||+|
T Consensus 76 -~~~~~~---~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~-------- 134 (196)
T d2bfwa1 76 -DPELEG---WARSLEEKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------- 134 (196)
T ss_dssp -CHHHHH---HHHHHHHHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT--------
T ss_pred -ccchhh---hhhhhhhcc---------ceeEEeeeccccccchhccccccccccccccccccccchhhhhc--------
Confidence 123333 333332222 12567888999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhc
Q 002955 463 MTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS 530 (863)
Q Consensus 463 ~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 530 (863)
+.|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.
T Consensus 135 -----------G~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~ 193 (196)
T d2bfwa1 135 -----------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 193 (196)
T ss_dssp -----------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -----------CceeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 56789999888877674 4899999999999999999999876655554444554443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=5.7e-19 Score=180.61 Aligned_cols=195 Identities=17% Similarity=0.123 Sum_probs=113.1
Q ss_pred ceeE-ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc-c----CCceEEccCcEEEEeC
Q 002955 593 RAIL-LDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C----EGLGIAAEHGYFVRPN 666 (863)
Q Consensus 593 rlI~-~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-l----~~l~liaenGa~I~~~ 666 (863)
|+|+ |||||||++ +++.++++++++|++| ++.|+ ++++|||........+.+ + ...++++.||+++...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHH-HhCCC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4555 699999999 7889999999999998 77775 556677766665544433 2 2356788899998887
Q ss_pred CceeEEeecCCCCc-cHHHHHH-HHHHHHhhcCC----CceeeeccceeEeecccCCCCcc-----------hhhHHHHH
Q 002955 667 YGVDWETCVSVPDF-SWKQIAE-PVMKLYTETTD----GSTIETKESALVWNFQYADPDFG-----------SCQAKELL 729 (863)
Q Consensus 667 ~~~~w~~~~~~~~~-~w~~~v~-~i~~~y~~~~~----gs~ie~k~~~l~~~y~~~d~~~~-----------~~~a~el~ 729 (863)
+...|......... ....... ........... ..+.........++......... .....+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (244)
T d2fuea1 76 GRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFV 155 (244)
T ss_dssp TEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHH
Confidence 66554432111000 0111111 11111111111 11111111111222111111100 01111222
Q ss_pred HHHHHHhcCCC-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC----cchHHHHHHhhh
Q 002955 730 DHLESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD----RSDEDMFEVIKS 798 (863)
Q Consensus 730 ~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~----~ND~~Mf~~ag~ 798 (863)
..+........ ....++..++||+|+++|||+|+++|++ +++++|++|||+ .||++||+.+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~ 223 (244)
T d2fuea1 156 EALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT 223 (244)
T ss_dssp HHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS
T ss_pred HHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCCC
Confidence 33333333333 3445688999999999999999999874 578999999996 599999999984
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=2.5e-18 Score=186.15 Aligned_cols=201 Identities=16% Similarity=0.169 Sum_probs=147.1
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
++.++|+|||++.+..... +.. ...+++.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~~---~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PNS---REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TTH---HHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hhh---hhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 3567899999887653322 222 23444544 578899999999999999999999999988887654 555
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
++... . + ++ +++++++.+.. ..+. +.++ .+++..+|+.||++|+||..|||+++++|||+|
T Consensus 232 i~g~~--~-~--~~----~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~- 292 (370)
T d2iw1a1 232 VVGQD--K-P--RK----FEALAEKLGVR------SNVH-FFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA- 292 (370)
T ss_dssp EESSS--C-C--HH----HHHHHHHHTCG------GGEE-EESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-
T ss_pred ccccc--c-c--cc----ccccccccccc------cccc-cccc--ccccccccccccccccccccccccceeeecccC-
Confidence 55321 1 1 22 33444444221 1233 3444 357999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC---Cc-eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GA-IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~a-l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
+.|+|+|..+|..+.+. .| ++++|.|++++|++|.++|+.+ +.++...++.++++++
T Consensus 293 ------------------G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~-~~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 293 ------------------GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADT 353 (370)
T ss_dssp ------------------TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHH
T ss_pred ------------------CeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHH
Confidence 56799999999888772 34 4568999999999999999854 4455556677888888
Q ss_pred CCHHHHHHHHHHHH
Q 002955 532 HDVAYWARSFLQDL 545 (863)
Q Consensus 532 ~~~~~W~~~~l~~l 545 (863)
++...|.+...+-+
T Consensus 354 ~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 354 QDLYSLPEKAADII 367 (370)
T ss_dssp SCCSCHHHHHHHHH
T ss_pred hChhHHHHHHHHHH
Confidence 98888987655443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.58 E-value=2.5e-15 Score=146.19 Aligned_cols=140 Identities=18% Similarity=0.191 Sum_probs=109.8
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002955 336 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415 (863)
Q Consensus 336 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~ 415 (863)
..+|+|||+++.||+...++|+.++ |+.+ |+.+|..+ .++..+.+.+++.+. +. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~---~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP---DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC---TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc---CcEEE
Confidence 4588999999999999999999765 5655 77777543 233444444444322 11 12444
Q ss_pred EcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---Cc
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GA 492 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~a 492 (863)
.+.++.+++..+|+.||++|.||..||+|++++|||+| +.|+|+|..+|+.+.+. .|
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~-------------------g~pvi~s~~~~~~e~i~~~~~g 131 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-------------------GKPVIAVNEGGFKETVINEKTG 131 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-------------------TCCEEEESSHHHHHHCCBTTTE
T ss_pred -eecccccccccccccccccccccccccccccccccccc-------------------cccceeecCCcceeeecCCccc
Confidence 57899999999999999999999999999999999999 56799999999988772 36
Q ss_pred eEeCCCCHHHHHHHHHHHhCCCHHH
Q 002955 493 IRVNPWNIDAVAEAMDSALGVSDAE 517 (863)
Q Consensus 493 l~VnP~d~~~~A~ai~~aL~m~~~e 517 (863)
+.+++ |+++++++|.+++++++.-
T Consensus 132 ~~~~~-d~~~~~~~i~~l~~~~~~~ 155 (166)
T d2f9fa1 132 YLVNA-DVNEIIDAMKKVSKNPDKF 155 (166)
T ss_dssp EEECS-CHHHHHHHHHHHHHCTTTT
T ss_pred ccCCC-CHHHHHHHHHHHHhCHHHH
Confidence 76665 8999999999999987543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.37 E-value=1.3e-14 Score=144.40 Aligned_cols=72 Identities=11% Similarity=0.086 Sum_probs=57.8
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec-C
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL-D 828 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l-~ 828 (863)
+....|+...+.+++++ |+++++|+||||+.||++||+.||. +|+++. ++..|+|.+ +
T Consensus 125 ~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~~~~~ 187 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVH 187 (206)
T ss_dssp EEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEEC
T ss_pred cccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCCc--------------cEEECCCHHHHHhCCCceeec
Confidence 34456777888888888 8999999999999999999999997 456654 346678864 7
Q ss_pred CHhHHHHHHHHHHH
Q 002955 829 DTAEILRMLLGLAE 842 (863)
Q Consensus 829 d~~eV~~~L~~L~~ 842 (863)
+.+|+.+.|.+..+
T Consensus 188 ~~~d~~~~~~~~~~ 201 (206)
T d1rkua_ 188 TYEDLKREFLKASS 201 (206)
T ss_dssp SHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHhh
Confidence 89999988877644
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.98 E-value=3.7e-10 Score=111.50 Aligned_cols=71 Identities=20% Similarity=0.233 Sum_probs=57.6
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---Ccccccee
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---KPSKAKYY 826 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~A~y~ 826 (863)
.+....+..|+.++..+++++ +++++++++|||+.||++||+.||.+ |+|+. .++.|+|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~~--------------va~na~~~lk~~Ad~v 196 (210)
T d1j97a_ 134 EGEVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGLK--------------IAFCAKPILKEKADIC 196 (210)
T ss_dssp ECSSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSEE--------------EEESCCHHHHTTCSEE
T ss_pred cccccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCCC--------------EEECCCHHHHHhCCEE
Confidence 344567788999999999999 99999999999999999999999974 34432 24789999
Q ss_pred cC--CHhHHHHHH
Q 002955 827 LD--DTAEILRML 837 (863)
Q Consensus 827 l~--d~~eV~~~L 837 (863)
++ |.++|++.|
T Consensus 197 i~~~d~~~vl~~l 209 (210)
T d1j97a_ 197 IEKRDLREILKYI 209 (210)
T ss_dssp ECSSCGGGGGGGC
T ss_pred EcCCCHHHHHHHh
Confidence 97 557887765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.94 E-value=1.4e-09 Score=106.03 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCH-
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDT- 830 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~- 830 (863)
..+|..+++++++++ |+++++|++|||+.||++||+.++.+ +++++. +..|+|++...
T Consensus 78 ~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~s--------------iap~nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 78 KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGTS--------------FAVADAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EECTTSCHHHHTTSSEECSSCT
T ss_pred cccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCCeE--------------EEcCCccHHHHHhCCEEeCCCC
Confidence 356999999999999 99999999999999999999999975 445543 58899998643
Q ss_pred --hHHHHHHHHHHHhhcC
Q 002955 831 --AEILRMLLGLAEASAQ 846 (863)
Q Consensus 831 --~eV~~~L~~L~~~~~~ 846 (863)
..|.++.+.|......
T Consensus 141 G~GavrE~~e~il~~~~~ 158 (177)
T d1k1ea_ 141 GKGAFREMSDMILQAQGK 158 (177)
T ss_dssp TTTHHHHHHHHHHHHTTC
T ss_pred CCchHHHHHHHHHHHCCC
Confidence 3377777777765443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=4.8e-10 Score=115.52 Aligned_cols=55 Identities=20% Similarity=0.327 Sum_probs=44.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~ 649 (863)
|++|+|+||+||||++ ....+ +.+.++|++| ++.|..|+++| +|+...+.+.+..
T Consensus 1 M~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l-~~~g~~~~~~TN~~~~~~~~~~~~l~~ 58 (250)
T d2c4na1 1 MTIKNVICDIDGVLMH---DNVAV-PGAAEFLHGI-MDKGLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCCCEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHTTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCeeEE---CCCcC-ccHHHHHHHH-HHCCCcEEEEeCCCCCCHHHHHHHHhh
Confidence 6799999999999998 44545 4678899998 88899999987 6777777776654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.83 E-value=9.7e-09 Score=105.54 Aligned_cols=49 Identities=16% Similarity=0.283 Sum_probs=38.6
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHH
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 645 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~ 645 (863)
.|+|+||+||||++ ....+ +.+.++|++| ++.|.+++++|+++......
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l-~~~g~~~~~~Tn~s~~~~~~ 50 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPET 50 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHH-HHCCCCEEEEeCCCCCCHHH
Confidence 68999999999998 44555 7789999998 88899999998655443333
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.78 E-value=7.5e-10 Score=114.55 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------ccccceecCC
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDD 829 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~d 829 (863)
+....+.+++++ |++++++++|||+ .+|+.|.+.+|.. .+.|..|.. ...++|++++
T Consensus 187 ~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~ii~~ 252 (261)
T d1vjra_ 187 NPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKN 252 (261)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESS
T ss_pred cHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCCc-----------EEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 457778889999 9999999999999 5799999999973 134444531 2346999999
Q ss_pred HhHHHHHHH
Q 002955 830 TAEILRMLL 838 (863)
Q Consensus 830 ~~eV~~~L~ 838 (863)
..|+.++|+
T Consensus 253 l~eL~~~l~ 261 (261)
T d1vjra_ 253 LGELAKAVQ 261 (261)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998874
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.61 E-value=7.8e-09 Score=103.83 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccce-ecCCH
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKY-YLDDT 830 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y-~l~d~ 830 (863)
..|+..+..+++.+ +.++++|++|||+.||++|++.|+.+ ++++.. .....+ ..+|.
T Consensus 144 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~~--------------~a~~~~~~~~~~~~~~~~~~~d~ 206 (226)
T d2feaa1 144 NQCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDLC--------------FARDYLLNECREQNLNHLPYQDF 206 (226)
T ss_dssp SCCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSEE--------------EECHHHHHHHHHTTCCEECCSSH
T ss_pred cCCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCEE--------------EEecchHHHHHHcCCCeeecCCH
Confidence 35777778888888 99999999999999999999999863 445531 122223 35789
Q ss_pred hHHHHHHHHHHHhh
Q 002955 831 AEILRMLLGLAEAS 844 (863)
Q Consensus 831 ~eV~~~L~~L~~~~ 844 (863)
.++...|+.+.+..
T Consensus 207 ~~i~~~l~~~~~~~ 220 (226)
T d2feaa1 207 YEIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHHHHTSHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887653
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.44 E-value=3.2e-07 Score=90.48 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=59.8
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------cccccee
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYY 826 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~ 826 (863)
.+.+-.|...+.++++.+ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|+|+
T Consensus 133 ~~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi~-----------~i~v~~g~~~~~~l~~~~pd~v 198 (210)
T d2ah5a1 133 SPEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYI 198 (210)
T ss_dssp CSSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEE
T ss_pred cccccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCCe-----------EEEEcCCCCCHHHHHhCCCCEE
Confidence 345667899999999999 99999999999999999999999972 366766642 3568899
Q ss_pred cCCHhHHHHHHH
Q 002955 827 LDDTAEILRMLL 838 (863)
Q Consensus 827 l~d~~eV~~~L~ 838 (863)
+++..|+++.||
T Consensus 199 i~~l~el~~~le 210 (210)
T d2ah5a1 199 AHKPLEVLAYFQ 210 (210)
T ss_dssp ESSTTHHHHHTC
T ss_pred ECCHHHHHHHhC
Confidence 999999988764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=1.3e-07 Score=94.89 Aligned_cols=59 Identities=24% Similarity=0.319 Sum_probs=46.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCC
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDD 829 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d 829 (863)
+..|+..++.+.+.. ++++++++|||.||++|++.+|. +|++|.. +..|+|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCCc--------------eEEECCCHHHHHHHHhCCCEeCC
Confidence 445999999887654 57899999999999999999986 4566643 2458899888
Q ss_pred HhHH
Q 002955 830 TAEI 833 (863)
Q Consensus 830 ~~eV 833 (863)
..++
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7665
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.33 E-value=8.7e-07 Score=90.58 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=40.5
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~ 648 (863)
+|.|+||+||||++ ... +-+.+.++|+.| ++.|..++++|+ |+...+.+.+.
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l-~~~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRL-QERQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 68999999999997 333 447888899988 888999999985 55556665553
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.23 E-value=3.8e-07 Score=89.95 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+...++.+++++ |++++++++|||+.+|+.+-+.+|.. ++.|.+|.. ...|.|.+++..|++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 567888999998 99999999999999999999999973 345555643 256788888888776
Q ss_pred HH
Q 002955 835 RM 836 (863)
Q Consensus 835 ~~ 836 (863)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.22 E-value=5.1e-07 Score=89.50 Aligned_cols=67 Identities=25% Similarity=0.316 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
.|....+.+++++ +++++++++|||+.+|+.+.+.+|.. ++.|+.|.. ...|+|++++..
T Consensus 152 p~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~l~ 217 (224)
T d2hsza1 152 PHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFA 217 (224)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGG
T ss_pred ccchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECCHH
Confidence 3566778888888 99999999999999999999999863 355655531 356889999999
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
+++++||
T Consensus 218 dL~~iie 224 (224)
T d2hsza1 218 DILKITQ 224 (224)
T ss_dssp GGGGGTC
T ss_pred HHHHhhC
Confidence 9887653
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.21 E-value=9.7e-07 Score=88.21 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=48.2
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhHHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
|++++++++|||+.+|+.+.+.+|.. +++|+.|.. +..|+|++++..++.++|+.|.
T Consensus 165 ~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 165 NYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp CCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred CCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 68899999999999999999999873 356666752 4578999999999999998875
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.18 E-value=1.4e-06 Score=84.64 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHHH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV~ 834 (863)
...+..+++++ +++++++++|||+.+|+.+-+.+|.. .++.|..|.. ...|+|++++..|+.
T Consensus 111 p~m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~ 177 (182)
T d2gmwa1 111 PGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADLP 177 (182)
T ss_dssp CHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGHH
T ss_pred cccccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHHH
Confidence 44577788888 99999999999999999999999863 2355666642 255999999999999
Q ss_pred HHHHH
Q 002955 835 RMLLG 839 (863)
Q Consensus 835 ~~L~~ 839 (863)
+.|++
T Consensus 178 ~~ikk 182 (182)
T d2gmwa1 178 QAIKK 182 (182)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88863
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.11 E-value=6.5e-06 Score=78.16 Aligned_cols=37 Identities=8% Similarity=-0.043 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
|...+..+++++ |++++++++|||+..|+...+.+|.
T Consensus 100 ~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 100 KVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCC
Confidence 667788889999 9999999999999999999999986
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.97 E-value=5.4e-06 Score=82.21 Aligned_cols=67 Identities=15% Similarity=0.077 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccce---ecCCHhHHHHH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKY---YLDDTAEILRM 836 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y---~l~d~~eV~~~ 836 (863)
...+..+++++ |++++++++|||+.+|+.+-+.+|.. .+.+..|.......+ .+.+..++..+
T Consensus 132 p~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~dl 197 (209)
T d2o2xa1 132 PGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSELGDL 197 (209)
T ss_dssp CHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHHHHH
T ss_pred chhhhHhHHHh---CCCccceEEeCCCHHHHHHHHHCCCc-----------EEEEeCCCCcccCCccccCccchhHHHHH
Confidence 44677788888 99999999999999999999999963 234555654333333 34566666666
Q ss_pred HHHH
Q 002955 837 LLGL 840 (863)
Q Consensus 837 L~~L 840 (863)
|+.+
T Consensus 198 l~~v 201 (209)
T d2o2xa1 198 LAAI 201 (209)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=1.8e-05 Score=77.81 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.. +++|..+.. ...|++.+++..|+
T Consensus 146 ~~~~~~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~~-----------~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 146 HPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred hHHHHHHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCCE-----------EEEECCCCCccchhhcCCCEEECChhhC
Confidence 346788999999 99999999999999999999999962 223322221 26788888888775
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.69 E-value=8.7e-06 Score=81.89 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=56.9
Q ss_pred CCCCH--HHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC------Cccccce
Q 002955 755 QGVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ------KPSKAKY 825 (863)
Q Consensus 755 ~gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y 825 (863)
.+..| ....+.+++++ |++++++++|||+. +|+.+.+.+|... +.+..+. ....|+|
T Consensus 160 ~~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~~-----------~~~~~~~~~~~~~~~~~p~~ 225 (247)
T d2gfha1 160 QKEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHY 225 (247)
T ss_dssp SSSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSE
T ss_pred cccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCeE-----------EEEECCCCCCcccccCCCCE
Confidence 35567 67889999999 99999999999995 8999999999731 1121121 2366889
Q ss_pred ecCCHhHHHHHHHHHH
Q 002955 826 YLDDTAEILRMLLGLA 841 (863)
Q Consensus 826 ~l~d~~eV~~~L~~L~ 841 (863)
++++..++.++|+++-
T Consensus 226 ~i~~l~eL~~ll~~i~ 241 (247)
T d2gfha1 226 MVSSVLELPALLQSID 241 (247)
T ss_dssp EESSGGGHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHh
Confidence 9999999999999874
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.67 E-value=1.4e-05 Score=79.72 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV 833 (863)
+....+.+++++ |+++++++.|||+ .+|+.+-+.+|.. ++.+.-+.. ...|+|++++..++
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-----------~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred hhHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCCE-----------EEEECCCCCCcccccCCCEEECCHHHH
Confidence 367889999999 9999999999998 6899999999863 123322221 36789999999999
Q ss_pred HHHHHHH
Q 002955 834 LRMLLGL 840 (863)
Q Consensus 834 ~~~L~~L 840 (863)
.++|++|
T Consensus 223 ~~~l~~l 229 (230)
T d1x42a1 223 IKIVDEL 229 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999876
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=1.5e-05 Score=75.54 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 761 LVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 761 ~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
..+.++++++ |++++++++|||+.+|+.+-+.+|..
T Consensus 108 ~~~~~~~~~~---~id~~~~~~IGD~~~Di~aA~~aG~~ 143 (161)
T d2fpwa1 108 KLVERYLAEQ---AMDRANSYVIGDRATDIQLAENMGIN 143 (161)
T ss_dssp GGGGGGC-------CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred HHHHHHHHhc---CCChhcEEEECCCHHHHHHHHHcCCe
Confidence 4567778888 99999999999999999999999973
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.54 E-value=0.00024 Score=64.86 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=45.9
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+++|-+||++-. ....+.+.+.++++.| ++.|+.++++||........+...+
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHH-HHcCCEEEEEcCcchhhhhHHHhhh
Confidence 468999999999852 3445677888888887 7889999999999999998887644
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.40 E-value=5.6e-05 Score=69.78 Aligned_cols=50 Identities=22% Similarity=0.276 Sum_probs=40.9
Q ss_pred hcccceeEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 589 RTKNRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
.++.|.|+||+||||+..... ...+-+.+++.|+.| ++.|..|+++|||+
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~ 62 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRE 62 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSC
T ss_pred CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHH-HhccCeEEEEecCc
Confidence 356789999999999863211 235678999999999 78899999999997
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.40 E-value=5.9e-05 Score=74.16 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ |++++++++|||+.+|+.+.+.+|.
T Consensus 148 ~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~ 183 (221)
T d1o08a_ 148 PDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA 183 (221)
T ss_dssp THHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred hHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCC
Confidence 56789999999 9999999999999999999999986
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.29 E-value=0.00032 Score=66.49 Aligned_cols=158 Identities=15% Similarity=0.195 Sum_probs=97.5
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEE
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 672 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~ 672 (863)
-++++|-+|||+-. .-..|-+.+.++++.| ++.|+.|+++||-.......+...+ |+..+|- ..+
T Consensus 3 ~~~~~d~~~~~~~~--~~Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~~~---Gi~~~~~--------~v~- 67 (168)
T d1wpga2 3 SVICSDKTGTLTTN--QLDPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRRI---GIFGENE--------EVA- 67 (168)
T ss_dssp CEEEECCTTTTBCC--CECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHT---TSSCTTC--------CCT-
T ss_pred EEEEECCccEEEEE--ecCCCchhHHHHHHHH-HHCcCEEEEECCCCHHHHHHHHHHc---CCCCCcc--------ccc-
Confidence 37889999999862 1234567888888887 8889999999999999998888643 3332210 000
Q ss_pred eecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEE
Q 002955 673 TCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEV 752 (863)
Q Consensus 673 ~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI 752 (863)
.....+.+. . .. ...+..+.+ .. ..-+-++
T Consensus 68 ----~~~~~~~~~-~---------------------------~~-------~~~~~~~~~----~~-------~~v~ar~ 97 (168)
T d1wpga2 68 ----DRAYTGREF-D---------------------------DL-------PLAEQREAC----RR-------ACCFARV 97 (168)
T ss_dssp ----TTEEEHHHH-H---------------------------HS-------CHHHHHHHH----HH-------CCEEESC
T ss_pred ----ccccccccc-c---------------------------hh-------hHHHHhhhh----hh-------hhhhhcc
Confidence 000011000 0 00 001111111 11 1124456
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD 828 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~ 828 (863)
.|. .|...++.+.+. | ..|.++||+.||.++|+.++. ++++|.. +..|++++-
T Consensus 98 ~p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Adv--------------GIa~~~gt~~a~~aAdivl~ 154 (168)
T d1wpga2 98 EPS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLA 154 (168)
T ss_dssp CHH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSSE--------------EEEETTSCHHHHHTCSEEET
T ss_pred chh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCCE--------------EEEeccccHHHHHhCCEEEc
Confidence 664 477777766543 3 569999999999999999974 5677753 356788763
Q ss_pred --CHhHHHHHHH
Q 002955 829 --DTAEILRMLL 838 (863)
Q Consensus 829 --d~~eV~~~L~ 838 (863)
+...|.++++
T Consensus 155 ~~~l~~v~~~I~ 166 (168)
T d1wpga2 155 DDNFSTIVAAVE 166 (168)
T ss_dssp TCCTHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 5777777765
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.16 E-value=0.00024 Score=63.59 Aligned_cols=46 Identities=13% Similarity=0.348 Sum_probs=38.7
Q ss_pred ceeEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 593 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
|-|+||+||||+.... ....|-+.+++.|+.| .+.|+.++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHH-HHCCCEEEEEecCC
Confidence 5689999999987422 2346889999999999 88899999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.15 E-value=0.00014 Score=65.10 Aligned_cols=55 Identities=29% Similarity=0.388 Sum_probs=42.6
Q ss_pred eeEecCCccccCCC-CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhH---HHHhhc
Q 002955 594 AILLDYDGTIMVPG-SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTL---AEWFSS 649 (863)
Q Consensus 594 lI~~DlDGTLl~~~-~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l---~~~~~~ 649 (863)
-|++|+||||+... .....|-+.+++.|++| .+.|+.++|.|||+.... .+|+..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHH-HHCCCeEEEEecCCCcchHHHHHHHHH
Confidence 47999999998632 12345778999999999 888999999999987543 456543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.38 E-value=0.00082 Score=64.14 Aligned_cols=34 Identities=18% Similarity=-0.011 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ ++ +.+++|||+.+|+.+.+.+|.
T Consensus 137 p~~~~~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 137 PESMLYLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp CHHHHHHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHc---CC--CCeEEEeCCHHHHHHHHHcCC
Confidence 55778888887 65 569999999999999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=95.66 E-value=0.0016 Score=69.91 Aligned_cols=58 Identities=24% Similarity=0.250 Sum_probs=48.7
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc---------cccceecCCHhHHHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---------SKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---------s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
+..++.|+++||+.||++|.+.+|.. .++|++|... ..|+|++++..++.++|..|.+
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~-----------~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCC-----------EEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 88899999999999999999999852 3678888532 3699999999999999877654
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.59 E-value=0.0075 Score=58.37 Aligned_cols=70 Identities=19% Similarity=0.224 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--c--------cccceecC
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P--------SKAKYYLD 828 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~--------s~A~y~l~ 828 (863)
+.......++++ |++|+++++|||+.+|+.+-+.+|.. +++|+.|.. + ..|+++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 456888899999 99999999999999999999999862 356666642 1 24889999
Q ss_pred CHhHHHHHHHHHHH
Q 002955 829 DTAEILRMLLGLAE 842 (863)
Q Consensus 829 d~~eV~~~L~~L~~ 842 (863)
+..++..+|..|++
T Consensus 209 ~l~eL~~ll~~l~~ 222 (222)
T d2fdra1 209 RMQDLPAVIAAMAE 222 (222)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcC
Confidence 99999999998863
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=95.42 E-value=0.0095 Score=59.13 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------------------
Q 002955 761 LVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-------------------- 819 (863)
Q Consensus 761 ~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-------------------- 819 (863)
......++++ |+. +++|++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 160 ~~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
T d1swva_ 160 WMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELREK 225 (257)
T ss_dssp HHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHHH
Confidence 4677888888 984 59999999999999999999973 366776742
Q ss_pred ---------ccccceecCCHhHHHHHHHHH
Q 002955 820 ---------PSKAKYYLDDTAEILRMLLGL 840 (863)
Q Consensus 820 ---------~s~A~y~l~d~~eV~~~L~~L 840 (863)
...|+|++++..|+..+|+.|
T Consensus 226 ~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 226 IEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 123899999999988888765
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.34 E-value=0.0065 Score=58.13 Aligned_cols=64 Identities=16% Similarity=0.125 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~ 838 (863)
|....+.+++++ |++|+++++|||+.+|+.+.+.+|.. +|.+......++|.+++..++.++|+
T Consensus 139 ~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~~-------------~i~v~~~~~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 139 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIFE 202 (204)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred hHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCCCcCeecCCHHHHHHHhc
Confidence 678899999999 99999999999999999999999962 55666556778899988888776653
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.21 E-value=0.035 Score=54.03 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=55.5
Q ss_pred CCCH--HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---------------
Q 002955 756 GVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--------------- 818 (863)
Q Consensus 756 gvsK--G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--------------- 818 (863)
+..| ....+++++++ |++|++|++|||+.+|+..-+.+|.. +|.|-.
T Consensus 144 ~~~KP~p~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~v~r~~~~~~~~~~~~~~~ 207 (245)
T d1qq5a_ 144 RVFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VARVARLSQEALARELVSGTI 207 (245)
T ss_dssp TCCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEEECCSCHHHHHHHTTSSSC
T ss_pred cccCccHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCccccccccccccc
Confidence 4445 45778899999 99999999999999999999999873 444410
Q ss_pred ---------------CccccceecCCHhHHHHHHHHHH
Q 002955 819 ---------------KPSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 819 ---------------~~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
....++|++++..++.++|+.|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 208 APLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp CHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred ccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12468899999999999998874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.27 E-value=0.018 Score=55.20 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=36.8
Q ss_pred cccceeEecCCccccCCCCC--------CCC-CCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 590 TKNRAILLDYDGTIMVPGSI--------STS-PNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~--------~~~-~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
.+.|+++||.||||+...+. +-. +.+.+.++|+.| .+.|..++|+|-.+
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 76 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEECH
T ss_pred CcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHH-HhCCcEEEEecCcc
Confidence 34689999999999853211 111 368899999999 77799999999764
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.71 E-value=0.02 Score=55.23 Aligned_cols=62 Identities=19% Similarity=0.323 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHhcccceeEecCCccccCCCC-----------C--------------------CCCCCHHHHHHHHHhhc
Q 002955 578 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGS-----------I--------------------STSPNAEAVAILDNLCR 626 (863)
Q Consensus 578 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-----------~--------------------~~~~s~~~~~aL~~L~~ 626 (863)
.+++.+.+.++..+...|+||+|-|++...+ . ...+-+.+++.|+.+ +
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~-~ 99 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 99 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHH-H
Confidence 5678888888877777999999999997321 0 012446788888887 8
Q ss_pred CCCCeEEEEcCCCh
Q 002955 627 DPKNVVFLVSGKDR 640 (863)
Q Consensus 627 d~g~~V~I~TGR~~ 640 (863)
++|+.|+.+|||+.
T Consensus 100 ~~Gv~IfyVTnR~~ 113 (209)
T d2b82a1 100 RRGDAIFFVTGRSP 113 (209)
T ss_dssp HHTCEEEEEECSCC
T ss_pred HcCCeEEEEeCCch
Confidence 88999999999973
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.67 E-value=0.063 Score=51.17 Aligned_cols=66 Identities=11% Similarity=0.136 Sum_probs=52.2
Q ss_pred CCCCHH--HHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe--CC-----Cccccce
Q 002955 755 QGVNKG--LVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV--GQ-----KPSKAKY 825 (863)
Q Consensus 755 ~gvsKG--~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~-----~~s~A~y 825 (863)
.+..|. ...+.+++++ |++|+++++|||+.+|+..-+.+|.. +|.| +. ....|+|
T Consensus 145 ~~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~ 208 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDW 208 (220)
T ss_dssp GTCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSE
T ss_pred eeccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCCE-------------EEEEcCCCCCcccccCCCCE
Confidence 456664 5888899999 99999999999999999999999973 4444 21 2366889
Q ss_pred ecCCHhHHHHH
Q 002955 826 YLDDTAEILRM 836 (863)
Q Consensus 826 ~l~d~~eV~~~ 836 (863)
.+++..++.++
T Consensus 209 ~i~~l~el~~l 219 (220)
T d1zrna_ 209 EVTSLRAVVEL 219 (220)
T ss_dssp EESSHHHHHTT
T ss_pred EECCHHHHHhh
Confidence 99998887654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.04 E-value=2.9 Score=43.19 Aligned_cols=250 Identities=18% Similarity=0.157 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEec
Q 002955 183 SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIG 260 (863)
Q Consensus 183 ~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dlig 260 (863)
.+-..+++ +.+..+| |+|.||.=-.-.++.-+-....++||+.. |---.|.++.. |+.+++.|-+. -||+--
T Consensus 75 ~~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~~--~~~de~~R~~iskls~~hf 148 (373)
T d1v4va_ 75 RILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLKE--PFPEEANRRLTDVLTDLDF 148 (373)
T ss_dssp HHHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-ccccccccccc--Ccchhhhhhhhccccceee
Confidence 34444444 4456678 89999988888888777777778888743 22222233322 44455555432 266666
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHH-H---hCCCe
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQD-Q---FKGQI 336 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~-~---~~~~~ 336 (863)
--|..+.++.++ +|.+. .+ +..-| -+++|- +. ....+.+ . ..++.
T Consensus 149 ~~t~~~~~~L~~-----~Ge~~--~~----I~~vG--------~p~~D~--i~----------~~~~~~~~~~~~~~~~~ 197 (373)
T d1v4va_ 149 APTPLAKANLLK-----EGKRE--EG----ILVTG--------QTGVDA--VL----------LAAKLGRLPEGLPEGPY 197 (373)
T ss_dssp ESSHHHHHHHHT-----TTCCG--GG----EEECC--------CHHHHH--HH----------HHHHHCCCCTTCCSSCE
T ss_pred ecchhhhhhhhh-----hcccc--cc----eeecc--------cchhhH--HH----------hhhhhcccccccccccc
Confidence 567777777665 24321 11 11111 112321 11 0111111 0 14567
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~ 416 (863)
+++..-|....+.+...+.++..+.+.+++.. ++....+. +. .+..+.+ .+ . ....+.+
T Consensus 198 ~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~~~~----~~---~~~~~~~---~~-~-----~~~n~~~- 256 (373)
T d1v4va_ 198 VTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVHLN----PV---VREAVFP---VL-K-----GVRNFVL- 256 (373)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECCSC----HH---HHHHHHH---HH-T-----TCTTEEE-
T ss_pred eeEEeccccccchHHHHHHHHHHHhhhcccce----eeeeeccc----cc---chhhhhh---hh-c-----cccccee-
Confidence 88889999888899999999999988887764 44333221 11 1111111 11 1 1223544
Q ss_pred cCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCccc-C-CCceE
Q 002955 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS-L-SGAIR 494 (863)
Q Consensus 417 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~-l-~~al~ 494 (863)
..+++..+...+++.|++++=.|- -...||.+. +-|+|.-...|-.+. + .|..+
T Consensus 257 ~~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~l-------------------g~P~Inir~~~eRqeg~~~g~nv 312 (373)
T d1v4va_ 257 LDPLEYGSMAALMRASLLLVTDSG-----GLQEEGAAL-------------------GVPVVVLRNVTERPEGLKAGILK 312 (373)
T ss_dssp ECCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHT-------------------TCCEEECSSSCSCHHHHHHTSEE
T ss_pred eccchHHHHHHHhhhceeEecccc-----hhhhcchhh-------------------cCcEEEeCCCccCHHHHhcCeeE
Confidence 458999999999999999886662 245588887 334555444443433 3 24333
Q ss_pred eCCCCHHHHHHHHHHHhCCC
Q 002955 495 VNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 495 VnP~d~~~~A~ai~~aL~m~ 514 (863)
+-+.|.+++..++..+|..+
T Consensus 313 lv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 313 LAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp ECCSCHHHHHHHHHHHHTCH
T ss_pred EcCCCHHHHHHHHHHHHcCH
Confidence 34569999999999999743
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=91.73 E-value=0.077 Score=52.16 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=23.0
Q ss_pred HHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 618 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 618 ~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
.+.|+.| ++.|+.++|+||.+...+...+..
T Consensus 105 ~~~L~~L-k~~g~~i~i~Tn~~~~~~~~~l~~ 135 (257)
T d1swva_ 105 KEVIASL-RERGIKIGSTTGYTREMMDIVAKE 135 (257)
T ss_dssp HHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHH
T ss_pred HHHHHHH-HhcccceeecCCCchhhHHHHHHH
Confidence 3456666 567899999999988877776654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=90.94 E-value=0.12 Score=49.64 Aligned_cols=38 Identities=11% Similarity=0.119 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+..+.+..++++ |++|+++++|||+.+|+..-+.+|..
T Consensus 186 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~~ 223 (253)
T d1zs9a1 186 ESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 223 (253)
T ss_dssp CHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CcHHHHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCCE
Confidence 456677777888 99999999999999999999999973
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.89 E-value=0.08 Score=50.00 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=25.2
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
-+.+.++|+.| ++.|+.++|+|+++.. ....+..
T Consensus 84 ~pgv~~~L~~L-~~~g~~~~v~Sn~~~~-~~~~l~~ 117 (204)
T d2go7a1 84 MPGAREVLAWA-DESGIQQFIYTHKGNN-AFTILKD 117 (204)
T ss_dssp CTTHHHHHHHH-HHTTCEEEEECSSCTH-HHHHHHH
T ss_pred cchHHhhhhcc-cccccchhhhcccchh-hhhhhhh
Confidence 35677888888 7789999999998764 3445543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.71 E-value=0.098 Score=50.33 Aligned_cols=16 Identities=38% Similarity=0.507 Sum_probs=14.0
Q ss_pred cccceeEecCCccccC
Q 002955 590 TKNRAILLDYDGTIMV 605 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~ 605 (863)
+.+++|+||+||||++
T Consensus 5 ~~i~~vlfD~dGTl~~ 20 (253)
T d1zs9a1 5 AEVTVILLDIEGTTTP 20 (253)
T ss_dssp TTCCEEEECCBTTTBC
T ss_pred CCCCEEEEeCcCCCcc
Confidence 4689999999999985
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.61 E-value=0.37 Score=45.07 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~ 838 (863)
+....+++++.+ |++|+++++|||+..|+.+.+.+|.. ++. +++.....+-|+
T Consensus 161 ~~~~~~~~~~~~---~~~p~e~l~VgD~~~Di~~A~~~G~~-------------ti~-----------v~~~~~~~~~l~ 213 (225)
T d1zd3a1 161 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV-------------TIL-----------VQDTDTALKELE 213 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-------------EEE-----------CSSHHHHHHHHH
T ss_pred HHHHHHHHhhhc---ccCccceeEEecCHHHHHHHHHcCCE-------------EEE-----------ECCcchhHHHHH
Confidence 367889999999 99999999999999999999999872 332 456677777788
Q ss_pred HHHHhh
Q 002955 839 GLAEAS 844 (863)
Q Consensus 839 ~L~~~~ 844 (863)
++....
T Consensus 214 ~~~~~~ 219 (225)
T d1zd3a1 214 KVTGIQ 219 (225)
T ss_dssp HHHTSC
T ss_pred HccCcc
Confidence 776543
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=87.45 E-value=0.14 Score=46.93 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+.+++++ |++++++++|||+.+|+...+.+|.
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~l~vgDs~~di~~A~~aG~ 179 (197)
T d2b0ca1 143 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 179 (197)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred chHHHHHHHHhc---CCCCCeEEEEeCCHHHHHHHHHcCC
Confidence 577788899999 9999999999999999999999986
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.87 E-value=0.57 Score=43.97 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ |++|+++++|||+.+|+.+-+.+|.
T Consensus 160 p~~~~~~~~~~---~v~p~~~l~IgD~~~Di~~A~~aG~ 195 (222)
T d1cr6a1 160 PQIYNFLLDTL---KAKPNEVVFLDDFGSNLKPARDMGM 195 (222)
T ss_dssp HHHHHHHHHHH---TSCTTSEEEEESSSTTTHHHHHHTC
T ss_pred hHHHHHHHHHh---CCCcceEEEEECCHHHHHHHHHcCC
Confidence 77788899999 9999999999999999999999997
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=83.72 E-value=0.53 Score=48.11 Aligned_cols=101 Identities=13% Similarity=0.108 Sum_probs=62.2
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--------c
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--------S 486 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--------~ 486 (863)
.+.+.+|+.++ +..||+||.. -|.| +..|+++|+ .|+|+.-+.+. +
T Consensus 273 ~i~~~~p~~~l---l~~a~~~v~h---gG~~-t~~Eal~~G-------------------~P~v~~P~~~d~~~eQ~~nA 326 (391)
T d1pn3a_ 273 FVVGEVNLQEL---FGRVAAAIHH---DSAG-TTLLAMRAG-------------------IPQIVVRRVVDNVVEQAYHA 326 (391)
T ss_dssp CEESSCCHHHH---HTTSSCEEEE---SCHH-HHHHHHHHT-------------------CCEEEECSSCCBTTBCCHHH
T ss_pred EEecccCHHHH---HhhccEEEec---CchH-HHHHHHHhC-------------------CcEEEeccccCCcchHHHHH
Confidence 45667887654 6789999865 4555 678999994 44565544442 2
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 487 PSL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 487 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
..+ ..|+.+++. +.++++++|.++|+.+ -+++.+++.+.++......=++.+.+.
T Consensus 327 ~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i~~~ 386 (391)
T d1pn3a_ 327 DRVAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLLFDA 386 (391)
T ss_dssp HHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 223 246777665 4899999999999632 234455566666554344333433333
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=80.69 E-value=0.71 Score=47.06 Aligned_cols=93 Identities=9% Similarity=0.019 Sum_probs=57.5
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----CcccC
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL 489 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~~~~l 489 (863)
+.+.+.+|+.+ +|..+|++| ..|-.-+..|+++++. |+|+.=+.+ .+..+
T Consensus 287 v~~~~~~p~~~---~l~~~~~~V----~hgG~~t~~Eal~~Gv-------------------P~v~~P~~~DQ~~na~~l 340 (401)
T d1iira_ 287 CFAIGEVNHQV---LFGRVAAVI----HHGGAGTTHVAARAGA-------------------PQILLPQMADQPYYAGRV 340 (401)
T ss_dssp EEECSSCCHHH---HGGGSSEEE----ECCCHHHHHHHHHHTC-------------------CEEECCCSTTHHHHHHHH
T ss_pred EEEEeccCHHH---HHhhcCEEE----ecCCchHHHHHHHhCC-------------------CEEEccccccHHHHHHHH
Confidence 35566788665 467799988 3455557779999944 444432322 23333
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 490 ---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 490 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
..|+.+++. +.+++++||.++|+ ++ -++|.+++.+.+.+....
T Consensus 341 ~~~G~g~~l~~~~~~~~~l~~ai~~~l~--~~-~~~~a~~~~~~~~~~~~~ 388 (401)
T d1iira_ 341 AELGVGVAHDGPIPTFDSLSAALATALT--PE-THARATAVAGTIRTDGAA 388 (401)
T ss_dssp HHHTSEEECSSSSCCHHHHHHHHHHHTS--HH-HHHHHHHHHHHSCSCHHH
T ss_pred HHCCCEEEcCcCCCCHHHHHHHHHHHhC--HH-HHHHHHHHHHHHHhcChH
Confidence 347777765 68999999999995 33 344455555555543333
|