Citrus Sinensis ID: 003020

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850------

MFVKLQLDTSCFYVLCSTKTSPSSNIGASASVSVSSLEKKIETQTLLNNSNSERVKRLSKVHNHSKFDKPNGVVHEHELKKQSFEQKPHREQSKNTWVDVRIGNERRTDVISAVCVNGEVQTKCSTKWARYGGCIPSMLQALDTVKDLDEALKPWAENLSNKERSIILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNAQSGLQAWMSTLSSVIEECDDDYNNA

cccccccccccHHHccccccccccccccccccccccccccccHHccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHccccHcccccHHHHHHHHHccccHHHHHcHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccccEEEHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHccccc

**VKLQLDTSCFYVLCS**************************QTLLNNSNSERVKRL***********PNGVVHEHELKKQSFEQKPHREQSKNTWVDVRIGNERRTDVISAVCVNGEVQTKCSTKWARYGGCIPSMLQALDTVKDLDEALKPWAENLSNKERSIILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNAQSGLQAWMSTLSSVIEECDDDYN**

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pentatricopeptide repeat-containing protein At3g23020		probable	Q9LS88

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 320-475
View the alignment between query and template
View the model in PyMOL

Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 599-716
View the alignment between query and template
View the model in PyMOL

Template: 2XPI, chain A
Confidence level:very confident
Coverage over the Query: 192-294,312-376,410-556,592-784
View the alignment between query and template
View the model in PyMOL

Template: 2XPI, chain A
Confidence level:very confident
Coverage over the Query: 164-263,279-474,509-562,597-748
View the alignment between query and template
View the model in PyMOL

Template: 1W3B, chain A
Confidence level:very confident
Coverage over the Query: 433-822
View the alignment between query and template
View the model in PyMOL

Template: 3LVG, chain A
Confidence level:probable
Coverage over the Query: 137-289,315-447
View the alignment between query and template
View the model in PyMOL

Template: 4FHN, chain B
Confidence level:probable
Coverage over the Query: 639-707,718-844
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
1xi4, chain A		confident	Alignment \| Template Structure